SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    786401 8cvl:1k (2.3) BS02 MG ? GO:0003735 ... P80376 36316410
    786402 8cvl:1l (2.3) BS01 rna ? GO:0000049 ... Q5SHN3 36316410
    786403 8cvl:1l (2.3) BS02 rna ? GO:0000049 ... Q5SHN3 36316410
    786404 8cvl:1l (2.3) BS03 MG ? GO:0000049 ... Q5SHN3 36316410
    786405 8cvl:1m (2.3) BS01 rna ? GO:0000049 ... P80377 36316410
    786406 8cvl:1m (2.3) BS02 rna ? GO:0000049 ... P80377 36316410
    786407 8cvl:1m (2.3) BS03 rna ? GO:0000049 ... P80377 36316410
    786408 8cvl:1m (2.3) BS04 MG ? GO:0000049 ... P80377 36316410
    786409 8cvl:1n (2.3) BS01 rna ? GO:0003735 ... P0DOY6 36316410
    786410 8cvl:1n (2.3) BS02 ZN ? GO:0003735 ... P0DOY6 36316410
    786411 8cvl:1o (2.3) BS01 rna ? GO:0003735 ... Q5SJ76 36316410
    786412 8cvl:1o (2.3) BS02 rna ? GO:0003735 ... Q5SJ76 36316410
    786413 8cvl:1p (2.3) BS01 rna ? GO:0003735 ... Q5SJH3 36316410
    786414 8cvl:1q (2.3) BS01 rna ? GO:0003735 ... P0DOY7 36316410
    786415 8cvl:1r (2.3) BS01 rna ? GO:0003735 ... Q5SLQ0 36316410
    786416 8cvl:1s (2.3) BS01 rna ? GO:0000028 ... Q5SHP2 36316410
    786417 8cvl:1t (2.3) BS01 rna ? GO:0003723 ... P80380 36316410
    786418 8cvl:1t (2.3) BS02 MG ? GO:0003723 ... P80380 36316410
    786419 8cvl:20 (2.3) BS01 rna ? GO:0003735 ... P60493 36316410
    786420 8cvl:20 (2.3) BS02 rna ? GO:0003735 ... P60493 36316410
    786421 8cvl:20 (2.3) BS03 rna ? GO:0003735 ... P60493 36316410
    786422 8cvl:21 (2.3) BS01 rna ? GO:0003735 ... P60494 36316410
    786423 8cvl:21 (2.3) BS02 rna ? GO:0003735 ... P60494 36316410
    786424 8cvl:21 (2.3) BS03 MG ? GO:0003735 ... P60494 36316410
    786425 8cvl:22 (2.3) BS01 rna ? GO:0003735 ... Q5SHP6 36316410
    786426 8cvl:23 (2.3) BS01 rna ? GO:0003735 ... Q5SHQ6 36316410
    786427 8cvl:23 (2.3) BS02 rna ? GO:0003735 ... Q5SHQ6 36316410
    786428 8cvl:23 (2.3) BS03 MG ? GO:0003735 ... Q5SHQ6 36316410
    786429 8cvl:24 (2.3) BS01 rna ? GO:0003735 ... Q5SJE1 36316410
    786430 8cvl:24 (2.3) BS02 ZN ? GO:0003735 ... Q5SJE1 36316410
    786431 8cvl:25 (2.3) BS01 rna ? GO:0003735 ... P80339 36316410
    786432 8cvl:25 (2.3) BS02 ZN ? GO:0003735 ... P80339 36316410
    786433 8cvl:26 (2.3) BS01 rna ? GO:0000049 ... P35871 36316410
    786434 8cvl:26 (2.3) BS02 MG ? GO:0000049 ... P35871 36316410
    786435 8cvl:26 (2.3) BS03 ZN ? GO:0000049 ... P35871 36316410
    786436 8cvl:27 (2.3) BS01 rna ? GO:0003735 ... P80340 36316410
    786437 8cvl:27 (2.3) BS02 MG ? GO:0003735 ... P80340 36316410
    786438 8cvl:28 (2.3) BS01 rna ? GO:0003735 ... Q5SKU1 36316410
    786439 8cvl:29 (2.3) BS01 rna ? GO:0003735 ... Q5SHR2 36316410
    786440 8cvl:29 (2.3) BS02 ZN ? GO:0003735 ... Q5SHR2 36316410
    786441 8cvl:2D (2.3) BS01 rna ? GO:0002181 ... P60405 36316410
    786442 8cvl:2D (2.3) BS02 rna ? GO:0002181 ... P60405 36316410
    786443 8cvl:2D (2.3) BS03 MG ? GO:0002181 ... P60405 36316410
    786444 8cvl:2D (2.3) BS04 MG ? GO:0002181 ... P60405 36316410
    786445 8cvl:2D (2.3) BS05 MG ? GO:0002181 ... P60405 36316410
    786446 8cvl:2D (2.3) BS06 MG ? GO:0002181 ... P60405 36316410
    786447 8cvl:2D (2.3) BS07 MG ? GO:0002181 ... P60405 36316410
    786448 8cvl:2E (2.3) BS01 rna ? GO:0003735 ... Q5SHN8 36316410
    786449 8cvl:2E (2.3) BS02 MG ? GO:0003735 ... Q5SHN8 36316410
    786450 8cvl:2F (2.3) BS01 rna ? GO:0003735 ... Q5SHN9 36316410
    786451 8cvl:2F (2.3) BS02 MG ? GO:0003735 ... Q5SHN9 36316410
    786452 8cvl:2F (2.3) BS03 MG ? GO:0003735 ... Q5SHN9 36316410
    786453 8cvl:2F (2.3) BS04 MG ? GO:0003735 ... Q5SHN9 36316410
    786454 8cvl:2F (2.3) BS05 MG ? GO:0003735 ... Q5SHN9 36316410
    786455 8cvl:2G (2.3) BS01 rna ? GO:0000049 ... Q5SHQ0 36316410
    786456 8cvl:2G (2.3) BS02 rna ? GO:0000049 ... Q5SHQ0 36316410
    786457 8cvl:2G (2.3) BS03 rna ? GO:0000049 ... Q5SHQ0 36316410
    786458 8cvl:2G (2.3) BS04 MG ? GO:0000049 ... Q5SHQ0 36316410
    786459 8cvl:2H (2.3) BS01 rna ? GO:0002181 ... P0DOY8 36316410
    786460 8cvl:2I (2.3) BS01 rna ? GO:0003735 ... Q5SLQ1 36316410
    786461 8cvl:2N (2.3) BS01 rna ? GO:0003729 ... P60488 36316410
    786462 8cvl:2O (2.3) BS01 rna ? GO:0003735 ... Q5SHP8 36316410
    786463 8cvl:2O (2.3) BS02 rna ? GO:0003735 ... Q5SHP8 36316410
    786464 8cvl:2P (2.3) BS01 rna ? GO:0003735 ... Q5SHQ7 36316410
    786465 8cvl:2Q (2.3) BS01 rna ? GO:0000049 ... P60489 36316410
    786466 8cvl:2Q (2.3) BS02 rna ? GO:0000049 ... P60489 36316410
    786467 8cvl:2Q (2.3) BS03 rna ? GO:0000049 ... P60489 36316410
    786468 8cvl:2Q (2.3) BS04 rna ? GO:0000049 ... P60489 36316410
    786469 8cvl:2Q (2.3) BS05 MG ? GO:0000049 ... P60489 36316410
    786470 8cvl:2Q (2.3) BS06 MG ? GO:0000049 ... P60489 36316410
    786471 8cvl:2R (2.3) BS01 rna ? GO:0003735 ... Q9Z9H5 36316410
    786472 8cvl:2S (2.3) BS01 rna ? GO:0003735 ... Q5SHQ4 36316410
    786473 8cvl:2S (2.3) BS02 rna ? GO:0003735 ... Q5SHQ4 36316410
    786474 8cvl:2T (2.3) BS01 rna ? GO:0003735 ... P60490 36316410
    786475 8cvl:2T (2.3) BS02 rna ? GO:0003735 ... P60490 36316410
    786476 8cvl:2U (2.3) BS01 rna ? GO:0000027 ... P60491 36316410
    786477 8cvl:2U (2.3) BS02 MG ? GO:0000027 ... P60491 36316410
    786478 8cvl:2V (2.3) BS01 rna ? GO:0003723 ... P60492 36316410
    786479 8cvl:2V (2.3) BS02 MG ? GO:0003723 ... P60492 36316410
    786480 8cvl:2W (2.3) BS01 rna ? GO:0003735 ... Q5SHP3 36316410
    786481 8cvl:2W (2.3) BS02 MG ? GO:0003735 ... Q5SHP3 36316410
    786482 8cvl:2X (2.3) BS01 rna ? GO:0003735 ... Q5SHP0 36316410
    786483 8cvl:2X (2.3) BS02 MG ? GO:0003735 ... Q5SHP0 36316410
    786484 8cvl:2Y (2.3) BS01 rna ? GO:0003723 ... Q5SHP9 36316410
    786485 8cvl:2Y (2.3) BS02 ZN ? GO:0003723 ... Q5SHP9 36316410
    786486 8cvl:2Z (2.3) BS01 rna ? GO:0003723 ... Q5SHZ1 36316410
    786487 8cvl:2Z (2.3) BS02 rna ? GO:0003723 ... Q5SHZ1 36316410
    786488 8cvl:2Z (2.3) BS03 MG ? GO:0003723 ... Q5SHZ1 36316410
    786489 8cvl:2b (2.3) BS01 rna ? GO:0003735 ... P80371 36316410
    786490 8cvl:2c (2.3) BS01 rna ? GO:0003676 ... P80372 36316410
    786491 8cvl:2d (2.3) BS01 rna ? GO:0003723 ... P80373 36316410
    786492 8cvl:2d (2.3) BS02 SF4 ? GO:0003723 ... P80373 36316410
    786493 8cvl:2e (2.3) BS01 rna ? GO:0003723 ... Q5SHQ5 36316410
    786494 8cvl:2e (2.3) BS02 MG ? GO:0003723 ... Q5SHQ5 36316410
    786495 8cvl:2f (2.3) BS01 rna ? GO:0003735 ... Q5SLP8 36316410
    786496 8cvl:2f (2.3) BS02 MG ? GO:0003735 ... Q5SLP8 36316410
    786497 8cvl:2g (2.3) BS01 rna ? GO:0000049 ... P17291 36316410
    786498 8cvl:2g (2.3) BS02 rna ? GO:0000049 ... P17291 36316410
    786499 8cvl:2h (2.3) BS01 rna ? GO:0003735 ... P0DOY9 36316410
    786500 8cvl:2i (2.3) BS01 rna ? GO:0000049 ... P80374 36316410
    786501 8cvl:2i (2.3) BS02 rna ? GO:0000049 ... P80374 36316410
    786502 8cvl:2j (2.3) BS01 rna ? GO:0000049 ... Q5SHN7 36316410
    786503 8cvl:2k (2.3) BS01 rna ? GO:0003735 ... P80376 36316410
    786504 8cvl:2k (2.3) BS02 MG ? GO:0003735 ... P80376 36316410
    786505 8cvl:2l (2.3) BS01 rna ? GO:0000049 ... Q5SHN3 36316410
    786506 8cvl:2l (2.3) BS02 MG ? GO:0000049 ... Q5SHN3 36316410
    786507 8cvl:2l (2.3) BS03 MG ? GO:0000049 ... Q5SHN3 36316410
    786508 8cvl:2l (2.3) BS04 MG ? GO:0000049 ... Q5SHN3 36316410
    786509 8cvl:2m (2.3) BS01 rna ? GO:0000049 ... P80377 36316410
    786510 8cvl:2m (2.3) BS02 rna ? GO:0000049 ... P80377 36316410
    786511 8cvl:2m (2.3) BS03 rna ? GO:0000049 ... P80377 36316410
    786512 8cvl:2n (2.3) BS01 rna ? GO:0003735 ... P0DOY6 36316410
    786513 8cvl:2n (2.3) BS02 ZN ? GO:0003735 ... P0DOY6 36316410
    786514 8cvl:2o (2.3) BS01 rna ? GO:0003735 ... Q5SJ76 36316410
    786515 8cvl:2o (2.3) BS02 rna ? GO:0003735 ... Q5SJ76 36316410
    786516 8cvl:2p (2.3) BS01 rna ? GO:0003735 ... Q5SJH3 36316410
    786517 8cvl:2q (2.3) BS01 rna ? GO:0003735 ... P0DOY7 36316410
    786518 8cvl:2q (2.3) BS02 MG ? GO:0003735 ... P0DOY7 36316410
    786519 8cvl:2r (2.3) BS01 rna ? GO:0003735 ... Q5SLQ0 36316410
    786520 8cvl:2r (2.3) BS02 MG ? GO:0003735 ... Q5SLQ0 36316410
    786521 8cvl:2s (2.3) BS01 rna ? GO:0000028 ... Q5SHP2 36316410
    786522 8cvl:2t (2.3) BS01 rna ? GO:0003723 ... P80380 36316410
    786523 8cvm:0 (2.66) BS01 rna ? GO:0003735 ... Q6A6J5 36864821
    786524 8cvm:0 (2.66) BS02 ZN ? GO:0003735 ... Q6A6J5 36864821
    786525 8cvm:1 (2.66) BS01 rna ? GO:0003735 ... Q6A5A1 36864821
    786526 8cvm:1 (2.66) BS02 MG ? GO:0003735 ... Q6A5A1 36864821
    786527 8cvm:2 (2.66) BS01 rna ? GO:0003735 ... Q6A7V2 36864821
    786528 8cvm:3 (2.66) BS01 rna ? GO:0003735 ... Q6A6Q7 36864821
    786529 8cvm:4 (2.66) BS01 rna ? GO:0003735 ... Q6A8B4 36864821
    786530 8cvm:4 (2.66) BS02 ZN ? GO:0003735 ... Q6A8B4 36864821
    786531 8cvm:c (2.66) BS01 rna ? GO:0002181 ... Q6A6M9 36864821
    786532 8cvm:c (2.66) BS02 MG ? GO:0002181 ... Q6A6M9 36864821
    786533 8cvm:d (2.66) BS01 rna ? GO:0003735 ... Q6A6M6 36864821
    786534 8cvm:e (2.66) BS01 rna ? GO:0003735 ... Q6A6M7 36864821
    786535 8cvm:f (2.66) BS01 rna ? GO:0000049 ... Q6A6N8 36864821
    786536 8cvm:f (2.66) BS02 rna ? GO:0000049 ... Q6A6N8 36864821
    786537 8cvm:f (2.66) BS03 rna ? GO:0000049 ... Q6A6N8 36864821
    786538 8cvm:g (2.66) BS01 rna ? GO:0002181 ... Q6A6P1 36864821
    786539 8cvm:i (2.66) BS01 rna ? GO:0003729 ... Q6A6T3 36864821
    786540 8cvm:j (2.66) BS01 rna ? GO:0003735 ... Q6A6N6 36864821
    786541 8cvm:k (2.66) BS01 rna ? GO:0003735 ... Q6A6P5 36864821
    786542 8cvm:k (2.66) BS02 MG ? GO:0003735 ... Q6A6P5 36864821
    786543 8cvm:l (2.66) BS01 rna ? GO:0000049 ... Q6A6N3 36864821
    786544 8cvm:l (2.66) BS02 rna ? GO:0000049 ... Q6A6N3 36864821
    786545 8cvm:m (2.66) BS01 rna ? GO:0003735 ... Q6A6R2 36864821
    786546 8cvm:n (2.66) BS01 rna ? GO:0003735 ... Q6A6P2 36864821
    786547 8cvm:n (2.66) BS02 rna ? GO:0003735 ... Q6A6P2 36864821
    786548 8cvm:o (2.66) BS01 rna ? GO:0003735 ... Q6A7T1 36864821
    786549 8cvm:p (2.66) BS01 rna ? GO:0000027 ... Q6A7V3 36864821
    786550 8cvm:q (2.66) BS01 rna ? GO:0003723 ... Q6A9I3 36864821
    786551 8cvm:r (2.66) BS01 rna ? GO:0003735 ... Q6A6N1 36864821
    786552 8cvm:s (2.66) BS01 rna ? GO:0003735 ... Q6A6M8 36864821
    786553 8cvm:t (2.66) BS01 rna ? GO:0003723 ... Q6A6N7 36864821
    786554 8cvm:u (2.66) BS01 rna ? GO:0003723 ... Q6AAC8 36864821
    786555 8cvm:u (2.66) BS02 rna ? GO:0003723 ... Q6AAC8 36864821
    786556 8cvm:v (2.66) BS01 rna ? GO:0003735 ... Q6A9I2 36864821
    786557 8cvm:v (2.66) BS02 rna ? GO:0003735 ... Q6A9I2 36864821
    786558 8cvm:w (2.66) BS01 rna ? GO:0003735 ... A0A2B7I7B7 36864821
    786559 8cvm:w (2.66) BS02 ZN ? GO:0003735 ... A0A2B7I7B7 36864821
    786560 8cvm:x (2.66) BS01 rna ? GO:0003735 ... Q6A6N4 36864821
    786561 8cvm:y (2.66) BS01 rna ? GO:0003735 ... Q6A6P4 36864821
    786562 8cvm:y (2.66) BS02 rna ? GO:0003735 ... Q6A6P4 36864821
    786563 8cvm:z (2.66) BS01 rna ? GO:0003735 ... A0A2B7I771 36864821
    786564 8cvm:z (2.66) BS02 ZN ? GO:0003735 ... A0A2B7I771 36864821
    786565 8cvn:A (2.4) BS01 NAI 1.1.1.-
    1.1.1.141
    1.1.1.232
    GO:0001822 ... P15428 36774348
    786566 8cvn:A (2.4) BS02 SWL 1.1.1.-
    1.1.1.141
    1.1.1.232
    GO:0001822 ... P15428 36774348
    786567 8cvn:B (2.4) BS01 NAI 1.1.1.-
    1.1.1.141
    1.1.1.232
    GO:0001822 ... P15428 36774348
    786568 8cvn:B (2.4) BS02 SWL 1.1.1.-
    1.1.1.141
    1.1.1.232
    GO:0001822 ... P15428 36774348
    786569 8cvo:E (2.95) BS01 rna ? GO:0003723 ... Q6A6P3 36864821
    786570 8cvo:G (2.95) BS01 rna ? GO:0003676 ... Q6A6N2 36864821
    786571 8cvo:I (2.95) BS01 rna ? GO:0000049 ... Q6A6L4 36864821
    786572 8cvo:J (2.95) BS01 rna ? GO:0003723 ... Q6A6T4 36864821
    786573 8cvo:M (2.95) BS01 rna ? GO:0000049 ... Q6A6M5 36864821
    786574 8cvo:N (2.95) BS01 rna ? GO:0000049 ... Q6A6Q8 36864821
    786575 8cvo:S (2.95) BS01 rna ? GO:0003735 ... Q6A6N9 36864821
    786576 8cvo:S (2.95) BS02 ZN ? GO:0003735 ... Q6A6N9 36864821
    786577 8cvo:U (2.95) BS01 rna ? GO:0000028 ... Q6A6N0 36864821
    786578 8cvp:B (3.4) BS01 ZN ? GO:0005515 ... Q96SW2 36378961
    786579 8cvq:A (1.65) BS01 OYH 3.1.4.- GO:0005634 ... Q9NUW8 37181631
    786580 8cvq:B (1.65) BS01 OYH 3.1.4.- GO:0005634 ... Q9NUW8 37181631
    786581 8cvr:H (2.7) BS01 LDZ 3.4.25.1 GO:0004298 ... P28072 35858375
    786582 8cvr:I (2.7) BS01 LDZ 3.4.25.1 GO:0004298 ... Q99436 35858375
    786583 8cvr:I (2.7) BS02 LDZ 3.4.25.1 GO:0004298 ... Q99436 35858375
    786584 8cvr:J (2.7) BS01 LDZ 3.4.25.1 GO:0000502 ... P49720 35858375
    786585 8cvr:L (2.7) BS01 LDZ 3.4.25.1 GO:0004298 ... P28074 35858375
    786586 8cvr:M (2.7) BS01 LDZ 3.4.25.1 GO:0000502 ... P20618 35858375
    786587 8cvr:V (2.7) BS01 LDZ 3.4.25.1 GO:0004298 ... P28072 35858375
    786588 8cvr:W (2.7) BS01 LDZ 3.4.25.1 GO:0004298 ... Q99436 35858375
    786589 8cvr:W (2.7) BS02 LDZ 3.4.25.1 GO:0004298 ... Q99436 35858375
    786590 8cvr:X (2.7) BS01 LDZ 3.4.25.1 GO:0000502 ... P49720 35858375
    786591 8cvr:Z (2.7) BS01 LDZ 3.4.25.1 GO:0004298 ... P28074 35858375
    786592 8cvr:a (2.7) BS01 LDZ 3.4.25.1 GO:0000502 ... P20618 35858375
    786593 8cvs:H (3.1) BS01 LDZ 3.4.25.1 GO:0004298 ... Q99436 35858375
    786594 8cvs:H (3.1) BS02 LDZ 3.4.25.1 GO:0004298 ... Q99436 35858375
    786595 8cvs:I (3.1) BS01 LDZ 3.4.25.1 GO:0000502 ... P49720 35858375
    786596 8cvs:K (3.1) BS01 LDZ 3.4.25.1 GO:0004298 ... P28074 35858375
    786597 8cvs:L (3.1) BS01 LDZ 3.4.25.1 GO:0000502 ... P20618 35858375
    786598 8cvs:N (3.1) BS01 LDZ 3.4.25.1 GO:0004298 ... P28072 35858375
    786599 8cvs:V (3.1) BS01 LDZ 3.4.25.1 GO:0004298 ... Q99436 35858375
    786600 8cvs:V (3.1) BS02 LDZ 3.4.25.1 GO:0004298 ... Q99436 35858375

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).