SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    786401 8ch1:A (1.496) BS01 GLC ? GO:0015833 ... B9JXG4 38058289
    786402 8ch1:A (1.496) BS02 GLC ? GO:0015833 ... B9JXG4 38058289
    786403 8ch1:A (1.496) BS03 FRU ? GO:0015833 ... B9JXG4 38058289
    786404 8ch1:A (1.496) BS04 VDF ? GO:0015833 ... B9JXG4 38058289
    786405 8ch1:A (1.496) BS05 LAO ? GO:0015833 ... B9JXG4 38058289
    786406 8ch2:A (1.404) BS01 LAO ? GO:0015833 ... B9JXG4 38058289
    786407 8ch2:A (1.404) BS02 VDF ? GO:0015833 ... B9JXG4 38058289
    786408 8ch3:A (1.398) BS01 GLC ? GO:0015833 ... B9JXG4 38058289
    786409 8ch3:A (1.398) BS02 FRU ? GO:0015833 ... B9JXG4 38058289
    786410 8ch3:A (1.398) BS03 ALX ? GO:0015833 ... B9JXG4 38058289
    786411 8ch4:A (2.1) BS01 FE 1.13.11.64 GO:0051213 ... D3WZ86 37326584
    786412 8ch4:B (2.1) BS01 FE 1.13.11.64 GO:0051213 ... D3WZ86 37326584
    786413 8ch4:C (2.1) BS01 FE 1.13.11.64 GO:0051213 ... D3WZ86 37326584
    786414 8ch4:D (2.1) BS01 FE 1.13.11.64 GO:0051213 ... D3WZ86 37326584
    786415 8ch6:1 (5.9) BS01 rna ? GO:0000244 ... P62304 37165190
    786416 8ch6:2 (5.9) BS01 rna ? GO:0000244 ... P62306 37165190
    786417 8ch6:3 (5.9) BS01 rna ? GO:0000243 ... P62318 37165190
    786418 8ch6:4 (5.9) BS01 rna ? GO:0000244 ... P62316 37165190
    786419 8ch6:5 (5.9) BS01 rna ? GO:0000243 ... P62314 37165190
    786420 8ch6:8 (5.9) BS01 rna ? GO:0000244 ... P14678 37165190
    786421 8ch6:9 (5.9) BS01 rna ? GO:0000244 ... P62308 37165190
    786422 8ch6:C (5.9) BS01 rna ? GO:0000245 ... O75533 37165190
    786423 8ch6:C (5.9) BS02 rna ? GO:0000245 ... O75533 37165190
    786424 8ch6:D (5.9) BS01 rna ? GO:0000387 ... Q7RTV0 37165190
    786425 8ch6:D (5.9) BS02 ZN ? GO:0000387 ... Q7RTV0 37165190
    786426 8ch6:D (5.9) BS03 ZN ? GO:0000387 ... Q7RTV0 37165190
    786427 8ch6:E (5.9) BS01 rna ? GO:0000387 ... Q13435 37165190
    786428 8ch6:E (5.9) BS02 rna ? GO:0000387 ... Q13435 37165190
    786429 8ch6:E (5.9) BS03 rna ? GO:0000387 ... Q13435 37165190
    786430 8ch6:I (5.9) BS01 rna ? GO:0000245 ... Q15428 37165190
    786431 8ch6:I (5.9) BS02 rna ? GO:0000245 ... Q15428 37165190
    786432 8ch6:I (5.9) BS03 rna ? GO:0000245 ... Q15428 37165190
    786433 8ch6:I (5.9) BS04 rna ? GO:0000245 ... Q15428 37165190
    786434 8ch6:I (5.9) BS05 ZN ? GO:0000245 ... Q15428 37165190
    786435 8ch6:J (5.9) BS01 rna ? GO:0000375 ... Q12874 37165190
    786436 8ch6:J (5.9) BS02 rna ? GO:0000375 ... Q12874 37165190
    786437 8ch6:J (5.9) BS03 ZN ? GO:0000375 ... Q12874 37165190
    786438 8ch6:N (5.9) BS01 rna 3.6.4.13 GO:0000398 ... O60231 37165190
    786439 8ch6:O (5.9) BS01 rna ? GO:0000398 ... O43660 37165190
    786440 8ch6:P (5.9) BS01 rna ? GO:0000077 ... Q99459 37165190
    786441 8ch6:P (5.9) BS02 rna ? GO:0000077 ... Q99459 37165190
    786442 8ch6:Q (5.9) BS01 rna ? GO:0000398 ... Q9P013 37165190
    786443 8ch6:Q (5.9) BS02 rna ? GO:0000398 ... Q9P013 37165190
    786444 8ch6:T (5.9) BS01 rna ? GO:0000398 ... P41223 37165190
    786445 8ch6:T (5.9) BS02 ZN ? GO:0000398 ... P41223 37165190
    786446 8ch6:T (5.9) BS03 ZN ? GO:0000398 ... P41223 37165190
    786447 8ch6:T (5.9) BS04 ZN ? GO:0000398 ... P41223 37165190
    786448 8ch6:U (5.9) BS01 rna ? GO:0000398 ... Q9NW64 37165190
    786449 8ch6:U (5.9) BS02 rna ? GO:0000398 ... Q9NW64 37165190
    786450 8ch6:U (5.9) BS03 ZN ? GO:0000398 ... Q9NW64 37165190
    786451 8ch6:U (5.9) BS04 ZN ? GO:0000398 ... Q9NW64 37165190
    786452 8ch6:U (5.9) BS05 ZN ? GO:0000398 ... Q9NW64 37165190
    786453 8ch6:V (5.9) BS01 rna 5.2.1.8 GO:0000398 ... Q8WUA2 37165190
    786454 8ch6:W (5.9) BS01 peptide ? GO:0000398 ... Q9HCG8 37165190
    786455 8ch6:X (5.9) BS01 rna ? GO:0000245 ... Q9BZJ0 37165190
    786456 8ch6:Y (5.9) BS01 rna ? GO:0000122 ... Q13573 37165190
    786457 8ch6:Y (5.9) BS02 rna ? GO:0000122 ... Q13573 37165190
    786458 8ch6:Z (5.9) BS01 rna 2.3.2.27 GO:0000398 ... O15541 37165190
    786459 8ch6:Z (5.9) BS02 ZN 2.3.2.27 GO:0000398 ... O15541 37165190
    786460 8ch6:a (5.9) BS01 rna ? GO:0000244 ... Q6P2Q9 37165190
    786461 8ch6:a (5.9) BS02 rna ? GO:0000244 ... Q6P2Q9 37165190
    786462 8ch6:a (5.9) BS03 rna ? GO:0000244 ... Q6P2Q9 37165190
    786463 8ch6:a (5.9) BS04 rna ? GO:0000244 ... Q6P2Q9 37165190
    786464 8ch6:a (5.9) BS05 IHP ? GO:0000244 ... Q6P2Q9 37165190
    786465 8ch6:b (5.9) BS01 GTP ? GO:0000244 ... Q15029 37165190
    786466 8ch6:h (5.9) BS01 rna ? GO:0000244 ... P62306 37165190
    786467 8ch6:i (5.9) BS01 rna ? GO:0000244 ... P62304 37165190
    786468 8ch6:j (5.9) BS01 rna ? GO:0000243 ... P62318 37165190
    786469 8ch6:k (5.9) BS01 rna ? GO:0000243 ... P62314 37165190
    786470 8ch6:l (5.9) BS01 rna ? GO:0000244 ... P62316 37165190
    786471 8ch6:m (5.9) BS01 rna ? GO:0000244 ... P62308 37165190
    786472 8ch6:n (5.9) BS01 rna ? GO:0000244 ... P14678 37165190
    786473 8ch6:q (5.9) BS01 rna ? GO:0000398 ... Q9UQ35 37165190
    786474 8ch6:q (5.9) BS02 rna ? GO:0000398 ... Q9UQ35 37165190
    786475 8ch6:s (5.9) BS01 rna ? GO:0000387 ... P08579 37165190
    786476 8ch8:A (2.15) BS01 ULC ? GO:0003677 ... O75469 N/A
    786477 8ch9:A (1.43) BS01 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786478 8ch9:A (1.43) BS02 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786479 8ch9:A (1.43) BS03 F3S 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786480 8ch9:A (1.43) BS04 FC6 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786481 8ch9:A (1.43) BS05 ART 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786482 8ch9:B (1.43) BS01 FES 1.20.9.1 GO:0016020 ... Q7SIF3 N/A
    786483 8ch9:C (1.43) BS01 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786484 8ch9:C (1.43) BS02 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786485 8ch9:C (1.43) BS03 F3S 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786486 8ch9:C (1.43) BS04 ART 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786487 8ch9:C (1.43) BS05 FC6 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786488 8ch9:D (1.43) BS01 FES 1.20.9.1 GO:0016020 ... Q7SIF3 N/A
    786489 8ch9:E (1.43) BS01 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786490 8ch9:E (1.43) BS02 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786491 8ch9:E (1.43) BS03 F3S 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786492 8ch9:E (1.43) BS04 ART 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786493 8ch9:E (1.43) BS05 FC6 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786494 8ch9:F (1.43) BS01 FES 1.20.9.1 GO:0016020 ... Q7SIF3 N/A
    786495 8ch9:G (1.43) BS01 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786496 8ch9:G (1.43) BS02 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786497 8ch9:G (1.43) BS03 F3S 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786498 8ch9:G (1.43) BS04 FC6 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786499 8ch9:G (1.43) BS05 ART 1.20.9.1 GO:0003954 ... Q7SIF4 N/A
    786500 8ch9:H (1.43) BS01 FES 1.20.9.1 GO:0016020 ... Q7SIF3 N/A
    786501 8cha:A (1.81) BS01 DXE ? N/A P12318 N/A
    786502 8cha:A (1.81) BS02 FWN ? N/A P12318 N/A
    786503 8chc:A (1.679) BS01 Y45 ? GO:0015833 ... B9JXG4 38058289
    786504 8chd:A (2.34) BS01 UDP 2.4.1.- GO:0008194 ... N/A N/A
    786505 8chd:B (2.34) BS01 UDP 2.4.1.- GO:0008194 ... N/A N/A
    786506 8che:A (1.49) BS01 peptide N/A N/A N/A 39196196
    786507 8che:B (1.49) BS01 peptide N/A N/A N/A 39196196
    786508 8che:H (1.49) BS01 peptide N/A N/A N/A 39196196
    786509 8che:L (1.49) BS01 peptide N/A N/A N/A 39196196
    786510 8chf:A (4.25) BS01 29L 2.7.11.1 GO:0000165 ... P04049 38331211
    786511 8chf:B (4.25) BS01 29L 2.7.11.1 GO:0000165 ... P04049 38331211
    786512 8chi:A (1.7) BS01 UMR 5.2.1.8 GO:0003007 ... P62942 37772190
    786513 8chi:A (1.7) BS02 UMR 5.2.1.8 GO:0003007 ... P62942 37772190
    786514 8chi:B (1.7) BS01 UMR 5.2.1.8 GO:0003007 ... P62942 37772190
    786515 8chj:A (1.697) BS01 UQI 5.2.1.8 GO:0003007 ... P62942 37772190
    786516 8chj:B (1.697) BS01 UQI 5.2.1.8 GO:0003007 ... P62942 37772190
    786517 8chj:B (1.697) BS02 UQI 5.2.1.8 GO:0003007 ... P62942 37772190
    786518 8chj:C (1.697) BS01 UQI 5.2.1.8 GO:0003007 ... P62942 37772190
    786519 8chj:D (1.697) BS01 UQI 5.2.1.8 GO:0003007 ... P62942 37772190
    786520 8chk:A (1.55) BS01 UUI 5.2.1.8 GO:0003007 ... P62942 37772190
    786521 8chk:B (1.55) BS01 UUI 5.2.1.8 GO:0003007 ... P62942 37772190
    786522 8chk:C (1.55) BS01 UUI 5.2.1.8 GO:0003007 ... P62942 37772190
    786523 8chl:A (1.4) BS01 USV 5.2.1.8 GO:0003007 ... P62942 37772190
    786524 8chl:B (1.4) BS01 USV 5.2.1.8 GO:0003007 ... P62942 37772190
    786525 8chm:A (1.12) BS01 UT6 5.2.1.8 GO:0003007 ... P62942 37772190
    786526 8chn:A (0.99) BS01 UUI 5.2.1.8 GO:0003755 ... Q13451 37772190
    786527 8chp:A (1.0) BS01 UT6 5.2.1.8 GO:0003755 ... Q13451 37772190
    786528 8chq:A (1.01) BS01 UMR 5.2.1.8 GO:0003755 ... Q13451 37772190
    786529 8chr:A (1.1) BS01 UUI 5.2.1.8 GO:0003755 ... Q13451 37772190
    786530 8chs:A (3.15) BS01 A3P 2.8.2.8
    3.5.1.-
    GO:0000139 ... P52848 38351061
    786531 8chs:A (3.15) BS02 CA 2.8.2.8
    3.5.1.-
    GO:0000139 ... P52848 38351061
    786532 8chx:A (1.8) BS01 ZN ? GO:0030288 ... P57069 37095149
    786533 8chx:A (1.8) BS02 ZN ? GO:0030288 ... P57069 37095149
    786534 8chx:B (1.8) BS01 ZN ? GO:0030288 ... P57069 37095149
    786535 8chy:A (2.0) BS01 ZN N/A GO:0006396 ... N/A 38591647
    786536 8chy:A (2.0) BS02 ZN N/A GO:0006396 ... N/A 38591647
    786537 8chy:A (2.0) BS03 ZN N/A GO:0006396 ... N/A 38591647
    786538 8chy:A (2.0) BS04 ZN N/A GO:0006396 ... N/A 38591647
    786539 8chy:A (2.0) BS05 ZN N/A GO:0006396 ... N/A 38591647
    786540 8chy:A (2.0) BS06 ZN N/A GO:0006396 ... N/A 38591647
    786541 8ci0:AAA (1.902) BS01 MG 2.2.1.1 GO:0004802 ... Q7SIC9 36807428
    786542 8ci0:AAA (1.902) BS02 TPP 2.2.1.1 GO:0004802 ... Q7SIC9 36807428
    786543 8ci0:AAA (1.902) BS03 TPP 2.2.1.1 GO:0004802 ... Q7SIC9 36807428
    786544 8ci0:BBB (1.902) BS01 TPP 2.2.1.1 GO:0004802 ... Q7SIC9 36807428
    786545 8ci0:BBB (1.902) BS02 MG 2.2.1.1 GO:0004802 ... Q7SIC9 36807428
    786546 8ci0:BBB (1.902) BS03 TPP 2.2.1.1 GO:0004802 ... Q7SIC9 36807428
    786547 8ci0:CCC (1.902) BS01 UP0 2.2.1.1 GO:0004802 ... Q7SIC9 36807428
    786548 8ci0:CCC (1.902) BS02 MG 2.2.1.1 GO:0004802 ... Q7SIC9 36807428
    786549 8ci0:CCC (1.902) BS03 8EL 2.2.1.1 GO:0004802 ... Q7SIC9 36807428
    786550 8ci1:A (2.8) BS01 NCT ? GO:0004888 ... P36544 37749098
    786551 8ci1:B (2.8) BS01 NCT ? GO:0004888 ... P36544 37749098
    786552 8ci1:C (2.8) BS01 NCT ? GO:0004888 ... P36544 37749098
    786553 8ci1:D (2.8) BS01 NCT ? GO:0004888 ... P36544 37749098
    786554 8ci1:E (2.8) BS01 NCT ? GO:0004888 ... P36544 37749098
    786555 8ci5:A (3.2) BS01 rna 2.7.7.48 GO:0000166 ... A0A0P0ALW1 37549153
    786556 8ci6:A (1.199) BS01 ALX ? GO:0015833 ... B9JXG4 38058289
    786557 8ci6:A (1.199) BS02 BNX ? GO:0015833 ... B9JXG4 38058289
    786558 8ci9:C (1.41) BS01 FE 1.14.20.8 GO:0009611 ... A0A0N9HQ36 N/A
    786559 8cib:D (1.78) BS01 LYS 3.5.2.19 N/A A0A072ZIR4 37250041
    786560 8cib:F (1.78) BS01 LYS 3.5.2.19 N/A A0A072ZIR4 37250041
    786561 8cic:A (2.102) BS01 U30 ? GO:0001609 ... P0ABE7
    P29274
    37264098
    786562 8cic:A (2.102) BS02 CLR ? GO:0001609 ... P0ABE7
    P29274
    37264098
    786563 8cic:A (2.102) BS03 CLR ? GO:0001609 ... P0ABE7
    P29274
    37264098
    786564 8cic:A (2.102) BS04 CLR ? GO:0001609 ... P0ABE7
    P29274
    37264098
    786565 8cic:A (2.102) BS05 CLR ? GO:0001609 ... P0ABE7
    P29274
    37264098
    786566 8cie:A (2.2) BS01 US0 2.7.11.22 GO:0004672 ... O76039 37084253
    786567 8cig:A (1.4) BS01 CA N/A GO:0006396 ... N/A 38591647
    786568 8cij:A (2.821) BS01 USF 2.7.11.1 GO:0004672 ... Q92918 37531921
    786569 8cip:A (2.1) BS01 TPP 2.2.1.1 GO:0004802 ... A0A0I9QGZ2 N/A
    786570 8cip:A (2.1) BS02 MG 2.2.1.1 GO:0004802 ... A0A0I9QGZ2 N/A
    786571 8cip:A (2.1) BS03 TPP 2.2.1.1 GO:0004802 ... A0A0I9QGZ2 N/A
    786572 8cip:B (2.1) BS01 TPP 2.2.1.1 GO:0004802 ... A0A0I9QGZ2 N/A
    786573 8cip:B (2.1) BS02 TPP 2.2.1.1 GO:0004802 ... A0A0I9QGZ2 N/A
    786574 8cip:B (2.1) BS03 MG 2.2.1.1 GO:0004802 ... A0A0I9QGZ2 N/A
    786575 8cip:C (2.1) BS01 TPP 2.2.1.1 GO:0004802 ... A0A0I9QGZ2 N/A
    786576 8cip:C (2.1) BS02 MG 2.2.1.1 GO:0004802 ... A0A0I9QGZ2 N/A
    786577 8cip:C (2.1) BS03 TPP 2.2.1.1 GO:0004802 ... A0A0I9QGZ2 N/A
    786578 8cip:D (2.1) BS01 TPP 2.2.1.1 GO:0004802 ... A0A0I9QGZ2 N/A
    786579 8cip:D (2.1) BS02 TPP 2.2.1.1 GO:0004802 ... A0A0I9QGZ2 N/A
    786580 8cip:D (2.1) BS03 MG 2.2.1.1 GO:0004802 ... A0A0I9QGZ2 N/A
    786581 8cir:A (1.85) BS01 peptide ? GO:0003779 ... P26038 37866628
    786582 8cir:B (1.85) BS01 peptide ? GO:0003779 ... P26038 37866628
    786583 8cis:A (1.52) BS01 peptide ? GO:0003779 ... P26038 37866628
    786584 8cis:A (1.52) BS02 peptide ? GO:0003779 ... P26038 37866628
    786585 8cis:A (1.52) BS03 peptide ? GO:0003779 ... P26038 37866628
    786586 8civ:0 (2.47) BS01 rna ? GO:0000462 ... P0CX31 38030725
    786587 8civ:1 (2.47) BS01 rna ? GO:0002181 ... Q3E792 38030725
    786588 8civ:2 (2.47) BS01 rna ? GO:0003735 ... N/A 38030725
    786589 8civ:2 (2.47) BS02 ZN ? GO:0003735 ... N/A 38030725
    786590 8civ:3 (2.47) BS01 rna ? GO:0000028 ... P35997 38030725
    786591 8civ:4 (2.47) BS01 rna ? GO:0000028 ... Q3E7X9 38030725
    786592 8civ:5 (2.47) BS01 rna ? GO:0003735 ... N/A 38030725
    786593 8civ:5 (2.47) BS02 ZN ? GO:0003735 ... N/A 38030725
    786594 8civ:6 (2.47) BS01 rna ? GO:0002181 ... P0CX33 38030725
    786595 8civ:7 (2.47) BS01 rna ? GO:0001965 ... P38011 38030725
    786596 8civ:8 (2.47) BS01 rna ? GO:0003735 ... N/A 38030725
    786597 8civ:A (2.47) BS01 rna ? GO:0000470 ... P26784 38030725
    786598 8civ:Aa (2.47) BS01 rna ? GO:0003924 ... N/A 38030725
    786599 8civ:Aa (2.47) BS02 rna ? GO:0003924 ... N/A 38030725
    786600 8civ:Aa (2.47) BS03 rna ? GO:0003924 ... N/A 38030725

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).