SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    786601 8civ:Aa (2.47) BS04 SO1 ? GO:0003924 ... N/A 38030725
    786602 8civ:Aa (2.47) BS05 GDP ? GO:0003924 ... N/A 38030725
    786603 8civ:B (2.47) BS01 rna ? GO:0000448 ... P05740 38030725
    786604 8civ:B (2.47) BS02 rna ? GO:0000448 ... P05740 38030725
    786605 8civ:C (2.47) BS01 rna ? GO:0002181 ... P0CX49 38030725
    786606 8civ:D (2.47) BS01 rna ? GO:0002181 ... P0CX82 38030725
    786607 8civ:D (2.47) BS02 rna ? GO:0002181 ... P0CX82 38030725
    786608 8civ:DD (2.47) BS01 rna ? GO:0000027 ... P05317 38030725
    786609 8civ:E (2.47) BS01 rna ? GO:0002181 ... P0CX23 38030725
    786610 8civ:E (2.47) BS02 rna ? GO:0002181 ... P0CX23 38030725
    786611 8civ:EE (2.47) BS01 rna ? GO:0002181 ... P0CX45 38030725
    786612 8civ:EE (2.47) BS02 rna ? GO:0002181 ... P0CX45 38030725
    786613 8civ:Ee (2.47) BS01 rna ? GO:0000027 ... P0CX53 38030725
    786614 8civ:F (2.47) BS01 rna ? GO:0002181 ... Q02753 38030725
    786615 8civ:F (2.47) BS02 rna ? GO:0002181 ... Q02753 38030725
    786616 8civ:FF (2.47) BS01 rna ? GO:0000027 ... P14126 38030725
    786617 8civ:G (2.47) BS01 rna ? GO:0002181 ... P05749 38030725
    786618 8civ:GG (2.47) BS01 rna ? GO:0002181 ... P10664 38030725
    786619 8civ:GG (2.47) BS02 rna ? GO:0002181 ... P10664 38030725
    786620 8civ:H (2.47) BS01 rna ? GO:0002181 ... P0CX41 38030725
    786621 8civ:HH (2.47) BS01 rna ? GO:0000027 ... P26321 38030725
    786622 8civ:HH (2.47) BS02 rna ? GO:0000027 ... P26321 38030725
    786623 8civ:I (2.47) BS01 rna ? GO:0002181 ... P04449 38030725
    786624 8civ:II (2.47) BS01 rna ? GO:0000027 ... Q02326 38030725
    786625 8civ:J (2.47) BS01 rna ? GO:0000027 ... P04456 38030725
    786626 8civ:J (2.47) BS02 rna ? GO:0000027 ... P04456 38030725
    786627 8civ:JJ (2.47) BS01 rna ? GO:0000463 ... P05737 38030725
    786628 8civ:JJ (2.47) BS02 rna ? GO:0000463 ... P05737 38030725
    786629 8civ:K (2.47) BS01 rna ? GO:0002181 ... P05743 38030725
    786630 8civ:K (2.47) BS02 rna ? GO:0002181 ... P05743 38030725
    786631 8civ:KK (2.47) BS01 rna ? GO:0000470 ... P17076 38030725
    786632 8civ:KK (2.47) BS02 rna ? GO:0000470 ... P17076 38030725
    786633 8civ:L (2.47) BS01 rna ? GO:0002181 ... P0C2H6 38030725
    786634 8civ:LL (2.47) BS01 rna ? GO:0003735 ... N/A 38030725
    786635 8civ:M (2.47) BS01 rna ? GO:0002181 ... P02406 38030725
    786636 8civ:MM (2.47) BS01 rna ? GO:0000027 ... P41805 38030725
    786637 8civ:MM (2.47) BS02 rna ? GO:0000027 ... P41805 38030725
    786638 8civ:N (2.47) BS01 rna ? GO:0002181 ... P05747 38030725
    786639 8civ:NN (2.47) BS01 rna ? GO:0000027 ... P0C0W9 38030725
    786640 8civ:NN (2.47) BS02 rna ? GO:0000027 ... P0C0W9 38030725
    786641 8civ:NN (2.47) BS03 rna ? GO:0000027 ... P0C0W9 38030725
    786642 8civ:O (2.47) BS01 rna ? GO:0002181 ... P14120 38030725
    786643 8civ:OO (2.47) BS01 rna ? GO:0002181 ... Q12690 38030725
    786644 8civ:OO (2.47) BS02 rna ? GO:0002181 ... Q12690 38030725
    786645 8civ:P (2.47) BS01 rna ? GO:0002181 ... P0C2H8 38030725
    786646 8civ:PP (2.47) BS01 rna ? GO:0000027 ... P36105 38030725
    786647 8civ:Q (2.47) BS01 rna ? GO:0002181 ... P38061 38030725
    786648 8civ:QQ (2.47) BS01 rna ? GO:0000470 ... P05748 38030725
    786649 8civ:QQ (2.47) BS02 rna ? GO:0000470 ... P05748 38030725
    786650 8civ:R (2.47) BS01 rna ? GO:0000027 ... P05744 38030725
    786651 8civ:S (2.47) BS01 rna ? GO:0002181 ... P87262 38030725
    786652 8civ:S (2.47) BS02 ZN ? GO:0002181 ... P87262 38030725
    786653 8civ:T (2.47) BS01 rna ? GO:0000463 ... P0CX84 38030725
    786654 8civ:T (2.47) BS02 rna ? GO:0000463 ... P0CX84 38030725
    786655 8civ:U (2.47) BS01 rna ? GO:0000470 ... P05745 38030725
    786656 8civ:V (2.47) BS01 rna ? GO:0000448 ... P49166 38030725
    786657 8civ:V (2.47) BS02 rna ? GO:0000448 ... P49166 38030725
    786658 8civ:V (2.47) BS03 ZN ? GO:0000448 ... P49166 38030725
    786659 8civ:W (2.47) BS01 rna ? GO:0002181 ... P49167 38030725
    786660 8civ:X (2.47) BS01 rna ? GO:0002181 ... P04650 38030725
    786661 8civ:X (2.47) BS02 rna ? GO:0002181 ... P04650 38030725
    786662 8civ:Y (2.47) BS01 rna ? GO:0000027 ... P0CH08 38030725
    786663 8civ:Y (2.47) BS02 ZN ? GO:0000027 ... P0CH08 38030725
    786664 8civ:a (2.47) BS01 rna ? GO:0002181 ... P0CX27 38030725
    786665 8civ:a (2.47) BS02 rna ? GO:0002181 ... P0CX27 38030725
    786666 8civ:a (2.47) BS03 ZN ? GO:0002181 ... P0CX27 38030725
    786667 8civ:b (2.47) BS01 rna ? GO:0002181 ... P0CX25 38030725
    786668 8civ:b (2.47) BS02 ZN ? GO:0002181 ... P0CX25 38030725
    786669 8civ:d (2.47) BS01 rna ? GO:0000028 ... P32905 38030725
    786670 8civ:e (2.47) BS01 rna ? GO:0000462 ... P33442 38030725
    786671 8civ:f (2.47) BS01 rna ? GO:0000054 ... P25443 38030725
    786672 8civ:g (2.47) BS01 rna ? GO:0003723 ... N/A 38030725
    786673 8civ:h (2.47) BS01 rna ? GO:0002181 ... P0CX35 38030725
    786674 8civ:i (2.47) BS01 rna ? GO:0000054 ... P26783 38030725
    786675 8civ:j (2.47) BS01 rna ? GO:0000462 ... P0CX37 38030725
    786676 8civ:k (2.47) BS01 rna ? GO:0002181 ... P26786 38030725
    786677 8civ:l (2.47) BS01 rna ? GO:0000462 ... P0CX40 38030725
    786678 8civ:l (2.47) BS02 rna ? GO:0000462 ... P0CX40 38030725
    786679 8civ:m (2.47) BS01 rna ? GO:0000462 ... O13516 38030725
    786680 8civ:n (2.47) BS01 rna ? GO:0000054 ... Q08745 38030725
    786681 8civ:o (2.47) BS01 rna ? GO:0000028 ... P0CX47 38030725
    786682 8civ:p (2.47) BS01 rna ? GO:0000462 ... P05756 38030725
    786683 8civ:p (2.47) BS02 rna ? GO:0000462 ... P05756 38030725
    786684 8civ:q (2.47) BS01 rna ? GO:0000028 ... P06367 38030725
    786685 8civ:r (2.47) BS01 rna ? GO:0000054 ... Q01855 38030725
    786686 8civ:s (2.47) BS01 rna ? GO:0000462 ... P0CX51 38030725
    786687 8civ:t (2.47) BS01 rna ? GO:0000028 ... P02407 38030725
    786688 8civ:u (2.47) BS01 rna ? GO:0000054 ... P0CX55 38030725
    786689 8civ:v (2.47) BS01 rna ? GO:0000054 ... P07280 38030725
    786690 8civ:w (2.47) BS01 rna ? GO:0003723 ... N/A 38030725
    786691 8civ:y (2.47) BS01 rna ? GO:0002181 ... P0C0W1 38030725
    786692 8civ:z (2.47) BS01 rna ? GO:0000462 ... P0CX29 38030725
    786693 8ciw:A (1.93) BS01 FAD ? GO:0003995 ... A0A1H5ILA2 37315145
    786694 8ciw:A (1.93) BS02 ZKK ? GO:0003995 ... A0A1H5ILA2 37315145
    786695 8ciw:A (1.93) BS03 FAD ? GO:0003995 ... A0A1H5ILA2 37315145
    786696 8ciw:B (1.93) BS01 FAD ? GO:0003995 ... A0A1H5ILA2 37315145
    786697 8ciw:B (1.93) BS02 FAD ? GO:0003995 ... A0A1H5ILA2 37315145
    786698 8ciw:B (1.93) BS03 ZKK ? GO:0003995 ... A0A1H5ILA2 37315145
    786699 8cix:A (1.76) BS01 peptide ? GO:0003677 ... P0A988 38278788
    786700 8cix:A (1.76) BS02 CA ? GO:0003677 ... P0A988 38278788
    786701 8cix:A (1.76) BS03 CA ? GO:0003677 ... P0A988 38278788
    786702 8cix:A (1.76) BS04 MG ? GO:0003677 ... P0A988 38278788
    786703 8cix:A (1.76) BS05 MG ? GO:0003677 ... P0A988 38278788
    786704 8ciy:A (1.54) BS01 peptide ? GO:0003677 ... P0A988 38278788
    786705 8ciy:A (1.54) BS02 CA ? GO:0003677 ... P0A988 38278788
    786706 8ciy:A (1.54) BS03 MG ? GO:0003677 ... P0A988 38278788
    786707 8ciy:A (1.54) BS04 MG ? GO:0003677 ... P0A988 38278788
    786708 8ciy:A (1.54) BS05 MG ? GO:0003677 ... P0A988 38278788
    786709 8ciz:A (2.27) BS01 peptide ? GO:0003677 ... P0A988 38278788
    786710 8ciz:B (2.27) BS01 peptide ? GO:0003677 ... P0A988 38278788
    786711 8cj0:A (1.99) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    786712 8cj0:A (1.99) BS02 NIO 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    786713 8cj0:A (1.99) BS03 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    786714 8cj0:B (1.99) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    786715 8cj0:B (1.99) BS02 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    786716 8cj0:B (1.99) BS03 NIO 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    786717 8cj1:B (2.564) BS01 peptide ? GO:0005634 ... Q9Y294 37347155
    786718 8cj1:C (2.564) BS01 peptide ? GO:0005634 ... Q9Y294 37347155
    786719 8cj1:D (2.564) BS01 peptide ? GO:0005634 ... Q9Y294 37347155
    786720 8cj1:E (2.564) BS01 peptide ? GO:0005634 ... Q9Y294 37347155
    786721 8cj1:G (2.564) BS01 peptide ? GO:0005634 ... Q9Y294 37347155
    786722 8cj2:A (2.127) BS01 peptide ? GO:0005634 ... Q9Y294 37347155
    786723 8cj2:A (2.127) BS02 peptide ? GO:0005634 ... Q9Y294 37347155
    786724 8cj2:B (2.127) BS01 peptide ? GO:0005634 ... Q9Y294 37347155
    786725 8cj2:B (2.127) BS02 peptide ? GO:0005634 ... Q9Y294 37347155
    786726 8cj2:C (2.127) BS01 peptide ? GO:0005634 ... Q9Y294 37347155
    786727 8cj2:D (2.127) BS01 peptide ? GO:0005634 ... Q9Y294 37347155
    786728 8cj3:A (3.0) BS01 peptide ? GO:0005634 ... Q9Y294 37347155
    786729 8cj7:A (1.51) BS01 ZN ? N/A F8W4B7 37797307
    786730 8cj7:A (1.51) BS02 UTO ? N/A F8W4B7 37797307
    786731 8cj7:B (1.51) BS01 ZN ? N/A F8W4B7 37797307
    786732 8cj7:B (1.51) BS02 UTO ? N/A F8W4B7 37797307
    786733 8cj9:A (1.93) BS01 FAD 1.5.99.12 GO:0003824 ... E3T1X2 38776394
    786734 8cj9:A (1.93) BS02 UZX 1.5.99.12 GO:0003824 ... E3T1X2 38776394
    786735 8cj9:B (1.93) BS01 FAD 1.5.99.12 GO:0003824 ... E3T1X2 38776394
    786736 8cj9:B (1.93) BS02 UZX 1.5.99.12 GO:0003824 ... E3T1X2 38776394
    786737 8cja:A (2.1) BS01 RQM 1.2.7.4 GO:0003824 ... A0A1L8D0M5 38743001
    786738 8cja:A (2.1) BS02 SF4 1.2.7.4 GO:0003824 ... A0A1L8D0M5 38743001
    786739 8cja:A (2.1) BS03 SF4 1.2.7.4 GO:0003824 ... A0A1L8D0M5 38743001
    786740 8cja:B (2.1) BS01 SF4 2.3.1.169 GO:0003824 ... Q3ACS4 38743001
    786741 8cjb:A (2.5) BS01 RQM 1.2.7.4 GO:0003824 ... A0A1L8D0M5 38743001
    786742 8cjb:A (2.5) BS02 FES 1.2.7.4 GO:0003824 ... A0A1L8D0M5 38743001
    786743 8cjb:A (2.5) BS03 SF4 1.2.7.4 GO:0003824 ... A0A1L8D0M5 38743001
    786744 8cjb:B (2.5) BS01 SF4 2.3.1.169 GO:0003824 ... Q3ACS4 38743001
    786745 8cjc:A (2.22) BS01 RQM 1.2.7.4 GO:0003824 ... A0A1L8D0M5 38743001
    786746 8cjc:A (2.22) BS02 SF4 1.2.7.4 GO:0003824 ... A0A1L8D0M5 38743001
    786747 8cjc:A (2.22) BS03 SF4 1.2.7.4 GO:0003824 ... A0A1L8D0M5 38743001
    786748 8cjc:B (2.22) BS01 SF4 2.3.1.169 GO:0003824 ... Q3ACS4 38743001
    786749 8cjd:A (1.7) BS01 FAD ? N/A A0A861B9Z9 37314407
    786750 8cjd:B (1.7) BS01 FAD ? N/A A0A861B9Z9 37314407
    786751 8cjd:B (1.7) BS02 CA ? N/A A0A861B9Z9 37314407
    786752 8cje:A (1.8) BS01 FAD ? N/A A0A861B9Z9 37314407
    786753 8cje:A (1.8) BS02 TRP ? N/A A0A861B9Z9 37314407
    786754 8cje:B (1.8) BS01 FAD ? N/A A0A861B9Z9 37314407
    786755 8cje:B (1.8) BS02 TRP ? N/A A0A861B9Z9 37314407
    786756 8cje:C (1.8) BS01 FAD ? N/A A0A861B9Z9 37314407
    786757 8cje:C (1.8) BS02 TRP ? N/A A0A861B9Z9 37314407
    786758 8cje:D (1.8) BS01 FAD ? N/A A0A861B9Z9 37314407
    786759 8cje:D (1.8) BS02 TRP ? N/A A0A861B9Z9 37314407
    786760 8cjf:A (1.9) BS01 FAD ? N/A A0A861B9Z9 37314407
    786761 8cjf:A (1.9) BS02 64X ? N/A A0A861B9Z9 37314407
    786762 8cjf:B (1.9) BS01 FAD ? N/A A0A861B9Z9 37314407
    786763 8cjf:B (1.9) BS02 64X ? N/A A0A861B9Z9 37314407
    786764 8cjg:A (2.3) BS01 FAD ? N/A A0A861B9Z9 37314407
    786765 8cjg:A (2.3) BS02 UV3 ? N/A A0A861B9Z9 37314407
    786766 8cjg:B (2.3) BS01 FAD ? N/A A0A861B9Z9 37314407
    786767 8cjg:B (2.3) BS02 UV3 ? N/A A0A861B9Z9 37314407
    786768 8cji:A (1.65) BS01 FE 1.14.16.4 GO:0004497 ... P17752 37905925
    786769 8cji:A (1.65) BS02 UWC 1.14.16.4 GO:0004497 ... P17752 37905925
    786770 8cjj:A (1.66416) BS01 FE 1.14.16.4 GO:0004497 ... P17752 37905925
    786771 8cjj:A (1.66416) BS02 UVF 1.14.16.4 GO:0004497 ... P17752 37905925
    786772 8cjk:A (1.45915) BS01 FE 1.14.16.4 GO:0004497 ... P17752 37905925
    786773 8cjk:A (1.45915) BS02 UVU 1.14.16.4 GO:0004497 ... P17752 37905925
    786774 8cjl:A (1.83) BS01 FE 1.14.16.4 GO:0004497 ... P17752 37905925
    786775 8cjl:A (1.83) BS02 UXC 1.14.16.4 GO:0004497 ... P17752 37905925
    786776 8cjm:A (1.9) BS01 FE 1.14.16.4 GO:0004497 ... P17752 37905925
    786777 8cjm:A (1.9) BS02 UXL 1.14.16.4 GO:0004497 ... P17752 37905925
    786778 8cjn:A (1.68081) BS01 FE 1.14.16.4 GO:0004497 ... P17752 37905925
    786779 8cjn:A (1.68081) BS02 UX3 1.14.16.4 GO:0004497 ... P17752 37905925
    786780 8cjo:A (1.86634) BS01 FE 1.14.16.4 GO:0004497 ... P17752 37905925
    786781 8cjo:A (1.86634) BS02 UWL 1.14.16.4 GO:0004497 ... P17752 37905925
    786782 8cju:A (1.349) BS01 UKU ? GO:0015833 ... B9JXG4 38058289
    786783 8cjy:A (1.6) BS01 402 1.12.7.2 GO:0005506 ... P29166 37830175
    786784 8cjy:A (1.6) BS02 SF4 1.12.7.2 GO:0005506 ... P29166 37830175
    786785 8cjy:A (1.6) BS03 SF4 1.12.7.2 GO:0005506 ... P29166 37830175
    786786 8cjy:A (1.6) BS04 SF4 1.12.7.2 GO:0005506 ... P29166 37830175
    786787 8cjy:A (1.6) BS05 SF4 1.12.7.2 GO:0005506 ... P29166 37830175
    786788 8cjy:A (1.6) BS06 FES 1.12.7.2 GO:0005506 ... P29166 37830175
    786789 8cjy:A (1.6) BS07 MG 1.12.7.2 GO:0005506 ... P29166 37830175
    786790 8cjy:B (1.6) BS01 402 1.12.7.2 GO:0005506 ... P29166 37830175
    786791 8cjy:B (1.6) BS02 SF4 1.12.7.2 GO:0005506 ... P29166 37830175
    786792 8cjy:B (1.6) BS03 SF4 1.12.7.2 GO:0005506 ... P29166 37830175
    786793 8cjy:B (1.6) BS04 SF4 1.12.7.2 GO:0005506 ... P29166 37830175
    786794 8cjy:B (1.6) BS05 SF4 1.12.7.2 GO:0005506 ... P29166 37830175
    786795 8cjy:B (1.6) BS06 FES 1.12.7.2 GO:0005506 ... P29166 37830175
    786796 8cjy:B (1.6) BS07 MG 1.12.7.2 GO:0005506 ... P29166 37830175
    786797 8ck2:A (1.5) BS01 CA ? N/A Q02817 N/A
    786798 8ck2:A (1.5) BS02 CA ? N/A Q02817 N/A
    786799 8ck3:A (1.707) BS01 UXU ? N/A Q99814 37403966
    786800 8ck4:A (2.29) BS01 UY3 ? N/A Q99814 37403966

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).