SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    787001 8ckl:B (2.56) BS02 MAN ? N/A Q13591 38548715
    787002 8ckl:B (2.56) BS03 MAN ? N/A Q13591 38548715
    787003 8ckn:A (1.54) BS01 HEM 1.14.-.- GO:0004497 ... P9WPL3 N/A
    787004 8cko:A (1.421) BS01 GLC ? GO:0015833 ... Q52012 38058289
    787005 8cko:A (1.421) BS02 GLC ? GO:0015833 ... Q52012 38058289
    787006 8cko:A (1.421) BS03 BNX ? GO:0015833 ... Q52012 38058289
    787007 8cko:A (1.421) BS04 ALX ? GO:0015833 ... Q52012 38058289
    787008 8ckq:A (2.0) BS01 FAD 1.5.99.12 GO:0003824 ... E3T1W8 38776394
    787009 8ckq:A (2.0) BS02 UZX 1.5.99.12 GO:0003824 ... E3T1W8 38776394
    787010 8ckr:A (1.3) BS01 CA N/A GO:0006396 ... N/A 38591647
    787011 8ckr:A (1.3) BS02 CA N/A GO:0006396 ... N/A 38591647
    787012 8cks:A (2.6) BS01 UZC ? GO:0003677 ... P02768 N/A
    787013 8cks:A (2.6) BS02 OCA ? GO:0003677 ... P02768 N/A
    787014 8cks:A (2.6) BS03 OCA ? GO:0003677 ... P02768 N/A
    787015 8cks:A (2.6) BS04 OCA ? GO:0003677 ... P02768 N/A
    787016 8ckt:A (2.0) BS01 FAD 1.5.99.12 GO:0003824 ... E3T1W8 38776394
    787017 8ckt:A (2.0) BS02 V2F 1.5.99.12 GO:0003824 ... E3T1W8 38776394
    787018 8cku:0 (3.11) BS01 rna ? GO:0000462 ... P0CX31 38030725
    787019 8cku:1 (3.11) BS01 rna ? GO:0002181 ... Q3E792 38030725
    787020 8cku:2 (3.11) BS01 rna ? GO:0003735 ... N/A 38030725
    787021 8cku:2 (3.11) BS02 ZN ? GO:0003735 ... N/A 38030725
    787022 8cku:3 (3.11) BS01 rna ? GO:0000028 ... P35997 38030725
    787023 8cku:4 (3.11) BS01 rna ? GO:0000028 ... Q3E7X9 38030725
    787024 8cku:5 (3.11) BS01 rna ? GO:0003735 ... N/A 38030725
    787025 8cku:5 (3.11) BS02 ZN ? GO:0003735 ... N/A 38030725
    787026 8cku:6 (3.11) BS01 rna ? GO:0002181 ... P0CX33 38030725
    787027 8cku:7 (3.11) BS01 rna ? GO:0001965 ... P38011 38030725
    787028 8cku:8 (3.11) BS01 rna ? GO:0003735 ... N/A 38030725
    787029 8cku:A (3.11) BS01 rna ? GO:0000470 ... P26784 38030725
    787030 8cku:Aa (3.11) BS01 rna ? GO:0003924 ... N/A 38030725
    787031 8cku:Aa (3.11) BS02 rna ? GO:0003924 ... N/A 38030725
    787032 8cku:Aa (3.11) BS03 GTP ? GO:0003924 ... N/A 38030725
    787033 8cku:Aa (3.11) BS04 MG ? GO:0003924 ... N/A 38030725
    787034 8cku:B (3.11) BS01 rna ? GO:0000448 ... P05740 38030725
    787035 8cku:B (3.11) BS02 rna ? GO:0000448 ... P05740 38030725
    787036 8cku:C (3.11) BS01 rna ? GO:0002181 ... P0CX49 38030725
    787037 8cku:D (3.11) BS01 rna ? GO:0002181 ... P0CX82 38030725
    787038 8cku:D (3.11) BS02 rna ? GO:0002181 ... P0CX82 38030725
    787039 8cku:DD (3.11) BS01 rna ? GO:0000027 ... P05317 38030725
    787040 8cku:E (3.11) BS01 rna ? GO:0002181 ... P0CX23 38030725
    787041 8cku:E (3.11) BS02 rna ? GO:0002181 ... P0CX23 38030725
    787042 8cku:EE (3.11) BS01 rna ? GO:0002181 ... P0CX45 38030725
    787043 8cku:EE (3.11) BS02 rna ? GO:0002181 ... P0CX45 38030725
    787044 8cku:EE (3.11) BS03 MG ? GO:0002181 ... P0CX45 38030725
    787045 8cku:Ee (3.11) BS01 rna ? GO:0000027 ... P0CX53 38030725
    787046 8cku:F (3.11) BS01 rna ? GO:0002181 ... Q02753 38030725
    787047 8cku:F (3.11) BS02 rna ? GO:0002181 ... Q02753 38030725
    787048 8cku:FF (3.11) BS01 rna ? GO:0000027 ... P14126 38030725
    787049 8cku:G (3.11) BS01 rna ? GO:0002181 ... P05749 38030725
    787050 8cku:GG (3.11) BS01 rna ? GO:0002181 ... P10664 38030725
    787051 8cku:GG (3.11) BS02 rna ? GO:0002181 ... P10664 38030725
    787052 8cku:H (3.11) BS01 rna ? GO:0002181 ... P0CX41 38030725
    787053 8cku:H (3.11) BS02 rna ? GO:0002181 ... P0CX41 38030725
    787054 8cku:HH (3.11) BS01 rna ? GO:0000027 ... P26321 38030725
    787055 8cku:HH (3.11) BS02 rna ? GO:0000027 ... P26321 38030725
    787056 8cku:I (3.11) BS01 rna ? GO:0002181 ... P04449 38030725
    787057 8cku:II (3.11) BS01 rna ? GO:0000027 ... Q02326 38030725
    787058 8cku:J (3.11) BS01 rna ? GO:0000027 ... P04456 38030725
    787059 8cku:J (3.11) BS02 rna ? GO:0000027 ... P04456 38030725
    787060 8cku:JJ (3.11) BS01 rna ? GO:0000463 ... P05737 38030725
    787061 8cku:JJ (3.11) BS02 rna ? GO:0000463 ... P05737 38030725
    787062 8cku:K (3.11) BS01 rna ? GO:0002181 ... P05743 38030725
    787063 8cku:K (3.11) BS02 rna ? GO:0002181 ... P05743 38030725
    787064 8cku:KK (3.11) BS01 rna ? GO:0000470 ... P17076 38030725
    787065 8cku:KK (3.11) BS02 rna ? GO:0000470 ... P17076 38030725
    787066 8cku:L (3.11) BS01 rna ? GO:0002181 ... P0C2H6 38030725
    787067 8cku:LL (3.11) BS01 rna ? GO:0002181 ... P05738 38030725
    787068 8cku:M (3.11) BS01 rna ? GO:0002181 ... P02406 38030725
    787069 8cku:MM (3.11) BS01 rna ? GO:0000027 ... P41805 38030725
    787070 8cku:MM (3.11) BS02 rna ? GO:0000027 ... P41805 38030725
    787071 8cku:MM (3.11) BS03 rna ? GO:0000027 ... P41805 38030725
    787072 8cku:N (3.11) BS01 rna ? GO:0002181 ... P05747 38030725
    787073 8cku:NN (3.11) BS01 rna ? GO:0000027 ... P0C0W9 38030725
    787074 8cku:NN (3.11) BS02 rna ? GO:0000027 ... P0C0W9 38030725
    787075 8cku:O (3.11) BS01 rna ? GO:0002181 ... P14120 38030725
    787076 8cku:OO (3.11) BS01 rna ? GO:0002181 ... Q12690 38030725
    787077 8cku:P (3.11) BS01 rna ? GO:0002181 ... P0C2H8 38030725
    787078 8cku:PP (3.11) BS01 rna ? GO:0000027 ... P36105 38030725
    787079 8cku:Q (3.11) BS01 rna ? GO:0002181 ... P38061 38030725
    787080 8cku:QQ (3.11) BS01 rna ? GO:0000470 ... P05748 38030725
    787081 8cku:QQ (3.11) BS02 rna ? GO:0000470 ... P05748 38030725
    787082 8cku:R (3.11) BS01 rna ? GO:0000027 ... P05744 38030725
    787083 8cku:S (3.11) BS01 rna ? GO:0002181 ... P87262 38030725
    787084 8cku:S (3.11) BS02 ZN ? GO:0002181 ... P87262 38030725
    787085 8cku:T (3.11) BS01 rna ? GO:0000463 ... P0CX84 38030725
    787086 8cku:T (3.11) BS02 rna ? GO:0000463 ... P0CX84 38030725
    787087 8cku:U (3.11) BS01 rna ? GO:0000470 ... P05745 38030725
    787088 8cku:V (3.11) BS01 rna ? GO:0000448 ... P49166 38030725
    787089 8cku:V (3.11) BS02 rna ? GO:0000448 ... P49166 38030725
    787090 8cku:V (3.11) BS03 ZN ? GO:0000448 ... P49166 38030725
    787091 8cku:W (3.11) BS01 rna ? GO:0002181 ... P49167 38030725
    787092 8cku:X (3.11) BS01 rna ? GO:0002181 ... P04650 38030725
    787093 8cku:X (3.11) BS02 rna ? GO:0002181 ... P04650 38030725
    787094 8cku:Y (3.11) BS01 rna ? GO:0000027 ... P0CH08 38030725
    787095 8cku:Y (3.11) BS02 ZN ? GO:0000027 ... P0CH08 38030725
    787096 8cku:a (3.11) BS01 rna ? GO:0002181 ... P0CX27 38030725
    787097 8cku:a (3.11) BS02 rna ? GO:0002181 ... P0CX27 38030725
    787098 8cku:a (3.11) BS03 ZN ? GO:0002181 ... P0CX27 38030725
    787099 8cku:b (3.11) BS01 rna ? GO:0002181 ... P0CX25 38030725
    787100 8cku:b (3.11) BS02 rna ? GO:0002181 ... P0CX25 38030725
    787101 8cku:b (3.11) BS03 ZN ? GO:0002181 ... P0CX25 38030725
    787102 8cku:d (3.11) BS01 rna ? GO:0000028 ... P32905 38030725
    787103 8cku:e (3.11) BS01 rna ? GO:0000462 ... P33442 38030725
    787104 8cku:e (3.11) BS02 rna ? GO:0000462 ... P33442 38030725
    787105 8cku:f (3.11) BS01 rna ? GO:0000054 ... P25443 38030725
    787106 8cku:g (3.11) BS01 rna ? GO:0003723 ... N/A 38030725
    787107 8cku:h (3.11) BS01 rna ? GO:0002181 ... P0CX35 38030725
    787108 8cku:i (3.11) BS01 rna ? GO:0000054 ... P26783 38030725
    787109 8cku:j (3.11) BS01 rna ? GO:0000462 ... P0CX37 38030725
    787110 8cku:k (3.11) BS01 rna ? GO:0002181 ... P26786 38030725
    787111 8cku:l (3.11) BS01 rna ? GO:0000462 ... P0CX39 38030725
    787112 8cku:m (3.11) BS01 rna ? GO:0000462 ... O13516 38030725
    787113 8cku:n (3.11) BS01 rna ? GO:0000054 ... Q08745 38030725
    787114 8cku:o (3.11) BS01 rna ? GO:0000028 ... P0CX47 38030725
    787115 8cku:p (3.11) BS01 rna ? GO:0000462 ... P05756 38030725
    787116 8cku:q (3.11) BS01 rna ? GO:0000028 ... P06367 38030725
    787117 8cku:q (3.11) BS02 rna ? GO:0000028 ... P06367 38030725
    787118 8cku:r (3.11) BS01 rna ? GO:0000054 ... Q01855 38030725
    787119 8cku:s (3.11) BS01 rna ? GO:0000462 ... P0CX51 38030725
    787120 8cku:t (3.11) BS01 rna ? GO:0000028 ... P02407 38030725
    787121 8cku:u (3.11) BS01 rna ? GO:0000054 ... P0CX55 38030725
    787122 8cku:v (3.11) BS01 rna ? GO:0000054 ... P07280 38030725
    787123 8cku:w (3.11) BS01 rna ? GO:0003723 ... N/A 38030725
    787124 8cku:x (3.11) BS01 rna ? GO:0000447 ... P0C0V8 38030725
    787125 8cku:y (3.11) BS01 rna ? GO:0002181 ... P0C0W1 38030725
    787126 8cku:z (3.11) BS01 rna ? GO:0000462 ... P0CX29 38030725
    787127 8cku:z (3.11) BS02 rna ? GO:0000462 ... P0CX29 38030725
    787128 8cky:A (2.6) BS01 peptide ? GO:0016032 ... P12493 37040417
    787129 8cl0:A (3.12) BS01 peptide ? GO:0016032 ... P12493 37040417
    787130 8cl0:A (3.12) BS02 peptide ? GO:0016032 ... P12493 37040417
    787131 8cl0:B (3.12) BS01 peptide ? GO:0016032 ... P12493 37040417
    787132 8cl0:B (3.12) BS02 peptide ? GO:0016032 ... P12493 37040417
    787133 8cl0:C (3.12) BS01 peptide ? GO:0016032 ... P12493 37040417
    787134 8cl0:C (3.12) BS02 peptide ? GO:0016032 ... P12493 37040417
    787135 8cl0:D (3.12) BS01 peptide ? GO:0016032 ... P12493 37040417
    787136 8cl0:D (3.12) BS02 peptide ? GO:0016032 ... P12493 37040417
    787137 8cl0:E (3.12) BS01 peptide ? GO:0016032 ... P12493 37040417
    787138 8cl0:E (3.12) BS02 peptide ? GO:0016032 ... P12493 37040417
    787139 8cl0:F (3.12) BS01 peptide ? GO:0016032 ... P12493 37040417
    787140 8cl0:F (3.12) BS02 peptide ? GO:0016032 ... P12493 37040417
    787141 8cl1:A (3.35) BS01 peptide ? GO:0016032 ... P12493 37040417
    787142 8cl3:A (3.14) BS01 peptide ? GO:0016032 ... P12493 37040417
    787143 8cl5:A (1.31) BS01 NA 3.2.1.17 GO:0003796 ... P00698 38042952
    787144 8cl5:A (1.31) BS02 NA 3.2.1.17 GO:0003796 ... P00698 38042952
    787145 8cl6:A (1.32) BS01 NA 3.2.1.17 GO:0003796 ... P00698 38042952
    787146 8cl6:A (1.32) BS02 NA 3.2.1.17 GO:0003796 ... P00698 38042952
    787147 8cl7:A (1.76) BS01 RET ? GO:0016020 ... N0DKS8 38042952
    787148 8cl8:A (2.4) BS01 RET ? GO:0016020 ... N0DKS8 38042952
    787149 8cl9:A (2.5) BS01 GTP 3.6.5.- GO:0000226 ... P81947 38042952
    787150 8cl9:B (2.5) BS01 GTP ? GO:0000226 ... Q6B856 38042952
    787151 8cla:A (2.0) BS01 GTP 3.6.5.- GO:0000226 ... P81947 N/A
    787152 8cla:A (2.0) BS02 CA 3.6.5.- GO:0000226 ... P81947 N/A
    787153 8cla:A (2.0) BS03 I8R 3.6.5.- GO:0000226 ... P81947 N/A
    787154 8cla:B (2.0) BS01 GDP ? GO:0000226 ... Q6B856 N/A
    787155 8cla:B (2.0) BS02 I8R ? GO:0000226 ... Q6B856 N/A
    787156 8clb:A (3.0) BS01 GTP 3.6.5.- GO:0000226 ... P81947 38042952
    787157 8clb:A (3.0) BS02 MG 3.6.5.- GO:0000226 ... P81947 38042952
    787158 8clb:A (3.0) BS03 CA 3.6.5.- GO:0000226 ... P81947 38042952
    787159 8clb:A (3.0) BS04 LOC 3.6.5.- GO:0000226 ... P81947 38042952
    787160 8clb:B (3.0) BS01 GDP ? GO:0000226 ... Q6B856 38042952
    787161 8clb:B (3.0) BS02 LOC ? GO:0000226 ... Q6B856 38042952
    787162 8clb:C (3.0) BS01 GTP 3.6.5.- GO:0000226 ... P81947 38042952
    787163 8clb:C (3.0) BS02 MG 3.6.5.- GO:0000226 ... P81947 38042952
    787164 8clb:C (3.0) BS03 CA 3.6.5.- GO:0000226 ... P81947 38042952
    787165 8clb:C (3.0) BS04 LOC 3.6.5.- GO:0000226 ... P81947 38042952
    787166 8clb:D (3.0) BS01 GDP ? GO:0000226 ... Q6B856 38042952
    787167 8clb:D (3.0) BS02 LOC ? GO:0000226 ... Q6B856 38042952
    787168 8clb:F (3.0) BS01 ACP 6.3.2.25 GO:0036211 ... A0A8V0Z8P0 38042952
    787169 8clc:A (2.7) BS01 GTP 3.6.5.- GO:0000226 ... P81947 38042952
    787170 8clc:A (2.7) BS02 CA 3.6.5.- GO:0000226 ... P81947 38042952
    787171 8clc:B (2.7) BS01 GDP ? GO:0000226 ... Q6B856 38042952
    787172 8clc:C (2.7) BS01 GTP 3.6.5.- GO:0000226 ... P81947 38042952
    787173 8clc:C (2.7) BS02 CA 3.6.5.- GO:0000226 ... P81947 38042952
    787174 8clc:D (2.7) BS01 GDP ? GO:0000226 ... Q6B856 38042952
    787175 8clc:F (2.7) BS01 ACP 6.3.2.25 GO:0036211 ... A0A8V0Z8P0 38042952
    787176 8cld:A (3.2) BS01 GTP 3.6.5.- GO:0000226 ... P81947 38042952
    787177 8cld:A (3.2) BS02 CA 3.6.5.- GO:0000226 ... P81947 38042952
    787178 8cld:B (3.2) BS01 GDP ? GO:0000226 ... Q6B856 38042952
    787179 8cld:C (3.2) BS01 GTP 3.6.5.- GO:0000226 ... P81947 38042952
    787180 8cld:C (3.2) BS02 CA 3.6.5.- GO:0000226 ... P81947 38042952
    787181 8cld:D (3.2) BS01 GDP ? GO:0000226 ... Q6B856 38042952
    787182 8cld:D (3.2) BS02 BKF ? GO:0000226 ... Q6B856 38042952
    787183 8cld:F (3.2) BS01 ACP 6.3.2.25 GO:0000226 ... A0A8V0Z8P0 38042952
    787184 8cle:A (3.2) BS01 GTP 3.6.5.- GO:0000226 ... P81947 38042952
    787185 8cle:A (3.2) BS02 CA 3.6.5.- GO:0000226 ... P81947 38042952
    787186 8cle:B (3.2) BS01 VLB ? GO:0000226 ... Q6B856 38042952
    787187 8cle:B (3.2) BS02 GDP ? GO:0000226 ... Q6B856 38042952
    787188 8cle:C (3.2) BS01 VLB 3.6.5.- GO:0000226 ... P81947 38042952
    787189 8cle:C (3.2) BS02 GTP 3.6.5.- GO:0000226 ... P81947 38042952
    787190 8cle:C (3.2) BS03 CA 3.6.5.- GO:0000226 ... P81947 38042952
    787191 8cle:D (3.2) BS01 GDP ? GO:0000226 ... Q6B856 38042952
    787192 8clf:A (2.7) BS01 GTP 3.6.5.- GO:0000226 ... P81947 38042952
    787193 8clf:A (2.7) BS02 CA 3.6.5.- GO:0000226 ... P81947 38042952
    787194 8clf:A (2.7) BS03 V1O 3.6.5.- GO:0000226 ... P81947 38042952
    787195 8clf:B (2.7) BS01 GDP ? GO:0000226 ... Q6B856 38042952
    787196 8clf:B (2.7) BS02 V1O ? GO:0000226 ... Q6B856 38042952
    787197 8clf:C (2.7) BS01 GTP 3.6.5.- GO:0000226 ... P81947 38042952
    787198 8clf:C (2.7) BS02 MG 3.6.5.- GO:0000226 ... P81947 38042952
    787199 8clf:C (2.7) BS03 CA 3.6.5.- GO:0000226 ... P81947 38042952
    787200 8clf:D (2.7) BS01 GDP ? GO:0000226 ... Q6B856 38042952

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).