SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    787601 8d3s:A (1.84) BS01 QD6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 38328097
    787602 8d3t:A (2.37) BS01 MAN 2.4.1.- N/A A0A2K2AMS7 36849618
    787603 8d3t:A (2.37) BS02 MAN 2.4.1.- N/A A0A2K2AMS7 36849618
    787604 8d3t:B (2.37) BS01 MAN 2.4.1.- N/A A0A2K2AMS7 36849618
    787605 8d3t:B (2.37) BS02 MAN 2.4.1.- N/A A0A2K2AMS7 36849618
    787606 8d3t:C (2.37) BS01 MAN 2.4.1.- N/A A0A2K2AMS7 36849618
    787607 8d3t:C (2.37) BS02 MAN 2.4.1.- N/A A0A2K2AMS7 36849618
    787608 8d3u:A (3.7) BS01 ADP 7.2.2.13 GO:0000166 ... P13637 36075933
    787609 8d3u:A (3.7) BS02 ALF 7.2.2.13 GO:0000166 ... P13637 36075933
    787610 8d3w:A (3.5) BS01 ACP 7.2.2.13 GO:0000166 ... P13637 36075933
    787611 8d3x:A (4.1) BS01 MF4 7.2.2.13 GO:0000166 ... P13637 36075933
    787612 8d3z:A (2.56) BS01 MAN 2.4.1.- N/A A0A2K2AMS7 36849618
    787613 8d3z:A (2.56) BS02 MN 2.4.1.- N/A A0A2K2AMS7 36849618
    787614 8d3z:B (2.56) BS01 MAN 2.4.1.- N/A A0A2K2AMS7 36849618
    787615 8d3z:B (2.56) BS02 MN 2.4.1.- N/A A0A2K2AMS7 36849618
    787616 8d40:A (3.554) BS01 CA ? GO:0005509 ... Q9NYQ6 N/A
    787617 8d40:A (3.554) BS02 CA ? GO:0005509 ... Q9NYQ6 N/A
    787618 8d40:A (3.554) BS03 CA ? GO:0005509 ... Q9NYQ6 N/A
    787619 8d40:A (3.554) BS04 CA ? GO:0005509 ... Q9NYQ6 N/A
    787620 8d40:A (3.554) BS05 CA ? GO:0005509 ... Q9NYQ6 N/A
    787621 8d40:A (3.554) BS06 CA ? GO:0005509 ... Q9NYQ6 N/A
    787622 8d40:A (3.554) BS07 CA ? GO:0005509 ... Q9NYQ6 N/A
    787623 8d40:A (3.554) BS08 CA ? GO:0005509 ... Q9NYQ6 N/A
    787624 8d40:B (3.554) BS01 CA ? GO:0005509 ... Q9NYQ6 N/A
    787625 8d40:B (3.554) BS02 CA ? GO:0005509 ... Q9NYQ6 N/A
    787626 8d40:B (3.554) BS03 CA ? GO:0005509 ... Q9NYQ6 N/A
    787627 8d40:B (3.554) BS04 CA ? GO:0005509 ... Q9NYQ6 N/A
    787628 8d40:B (3.554) BS05 CA ? GO:0005509 ... Q9NYQ6 N/A
    787629 8d40:B (3.554) BS06 CA ? GO:0005509 ... Q9NYQ6 N/A
    787630 8d40:B (3.554) BS07 CA ? GO:0005509 ... Q9NYQ6 N/A
    787631 8d41:A (2.0) BS01 Q93 ? N/A P35606 N/A
    787632 8d41:B (2.0) BS01 Q93 ? N/A P35606 N/A
    787633 8d42:A (2.91) BS01 dna 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    787634 8d42:A (2.91) BS02 dna 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    787635 8d42:A (2.91) BS03 CA 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    787636 8d42:A (2.91) BS04 DCP 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    787637 8d43:B (2.88) BS01 CA ? GO:0005509 ... P14314 N/A
    787638 8d43:B (2.88) BS02 CA ? GO:0005509 ... P14314 N/A
    787639 8d47:A (2.0) BS01 peptide N/A N/A N/A 36701425
    787640 8d47:B (2.0) BS01 peptide N/A N/A N/A 36701425
    787641 8d47:H (2.0) BS01 peptide N/A N/A N/A 36701425
    787642 8d47:L (2.0) BS01 peptide N/A N/A N/A 36701425
    787643 8d49:A (3.2) BS01 rna ? GO:0003677 ... A0A0C2W1L1 36599980
    787644 8d4a:A (2.74) BS01 rna ? GO:0003677 ... A0A0C2W1L1 36599980
    787645 8d4a:A (2.74) BS02 rna ? GO:0003677 ... A0A0C2W1L1 36599980
    787646 8d4a:A (2.74) BS03 dna ? GO:0003677 ... A0A0C2W1L1 36599980
    787647 8d4a:A (2.74) BS04 dna ? GO:0003677 ... A0A0C2W1L1 36599980
    787648 8d4a:A (2.74) BS05 ZN ? GO:0003677 ... A0A0C2W1L1 36599980
    787649 8d4a:A (2.74) BS06 MG ? GO:0003677 ... A0A0C2W1L1 36599980
    787650 8d4a:A (2.74) BS07 MG ? GO:0003677 ... A0A0C2W1L1 36599980
    787651 8d4b:A (2.92) BS01 rna ? GO:0003677 ... A0A0C2W1L1 36599980
    787652 8d4b:A (2.92) BS02 rna ? GO:0003677 ... A0A0C2W1L1 36599980
    787653 8d4c:C (9.3) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787654 8d4c:D (9.3) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787655 8d4c:F (9.3) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787656 8d4c:H (9.3) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787657 8d4c:J (9.3) BS01 peptide ? GO:0005515 ... P35585 36269825
    787658 8d4c:M (9.3) BS01 peptide ? GO:0005515 ... P35585 36269825
    787659 8d4c:O (9.3) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    787660 8d4c:S (9.3) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    787661 8d4d:C (9.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787662 8d4d:D (9.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787663 8d4d:F (9.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787664 8d4d:H (9.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787665 8d4d:J (9.6) BS01 peptide ? GO:0005515 ... P35585 36269825
    787666 8d4d:M (9.6) BS01 peptide ? GO:0005515 ... P35585 36269825
    787667 8d4d:O (9.6) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    787668 8d4d:S (9.6) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    787669 8d4e:C (9.2) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787670 8d4e:H (9.2) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787671 8d4e:M (9.2) BS01 peptide ? GO:0005515 ... P35585 36269825
    787672 8d4e:S (9.2) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    787673 8d4e:Z (9.2) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787674 8d4f:C (9.8) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787675 8d4f:D (9.8) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787676 8d4f:F (9.8) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787677 8d4f:H (9.8) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787678 8d4f:J (9.8) BS01 peptide ? GO:0005515 ... P35585 36269825
    787679 8d4f:M (9.8) BS01 peptide ? GO:0005515 ... P35585 36269825
    787680 8d4f:O (9.8) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    787681 8d4f:Q (9.8) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787682 8d4f:S (9.8) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    787683 8d4f:Z (9.8) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787684 8d4g:C (11.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787685 8d4g:D (11.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787686 8d4g:F (11.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787687 8d4g:H (11.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787688 8d4g:J (11.6) BS01 peptide ? GO:0005515 ... P35585 36269825
    787689 8d4g:M (11.6) BS01 peptide ? GO:0005515 ... P35585 36269825
    787690 8d4g:O (11.6) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    787691 8d4g:Q (11.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787692 8d4g:S (11.6) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    787693 8d4g:Z (11.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    787694 8d4i:A (1.32) BS01 PUT 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787695 8d4i:A (1.32) BS02 EPE 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787696 8d4i:C (1.32) BS01 PUT 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787697 8d4i:C (1.32) BS02 EPE 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787698 8d4k:A (1.89) BS01 K36 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36119652
    787699 8d4m:A (1.81) BS01 K36 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36119652
    787700 8d4p:A (2.04) BS01 QAO 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 N/A
    787701 8d4q:A (2.2) BS01 FUC 3.4.21.37 GO:0000122 ... P08246 36736422
    787702 8d4q:B (2.2) BS01 FUC 3.4.21.37 GO:0000122 ... P08246 36736422
    787703 8d4q:B (2.2) BS02 FUC 3.4.21.37 GO:0000122 ... P08246 36736422
    787704 8d4r:D (3.81) BS01 BMA N/A N/A N/A N/A
    787705 8d4r:D (3.81) BS02 MAN N/A N/A N/A N/A
    787706 8d4r:L (3.81) BS01 MAN N/A N/A N/A N/A
    787707 8d4t:N (3.1) BS01 CU 7.1.1.9 GO:0004129 ... P00396 35858451
    787708 8d4t:N (3.1) BS02 MG 7.1.1.9 GO:0004129 ... P00396 35858451
    787709 8d4t:N (3.1) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 35858451
    787710 8d4t:N (3.1) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 35858451
    787711 8d4t:N (3.1) BS05 9Z9 7.1.1.9 GO:0004129 ... P00396 35858451
    787712 8d4t:O (3.1) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 35858451
    787713 8d4t:O (3.1) BS02 CU 7.1.1.9 GO:0004129 ... P68530 35858451
    787714 8d4t:O (3.1) BS03 CU 7.1.1.9 GO:0004129 ... P68530 35858451
    787715 8d4t:P (3.1) BS01 9Z9 7.1.1.9 GO:0004129 ... P00415 35858451
    787716 8d4t:S (3.1) BS01 ZN ? GO:0005740 ... P00428 35858451
    787717 8d4u:A (1.9) BS01 FUC 3.4.21.37 GO:0000122 ... P08246 36736422
    787718 8d4u:A (1.9) BS02 FUC 3.4.21.37 GO:0000122 ... P08246 36736422
    787719 8d4x:A (2.8) BS01 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    787720 8d4x:A (2.8) BS02 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    787721 8d4x:A (2.8) BS03 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    787722 8d4x:B (2.8) BS01 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    787723 8d4x:B (2.8) BS02 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    787724 8d4x:B (2.8) BS03 ZN 2.3.2.26 GO:0000209 ... O95071 37040767
    787725 8d4z:A (2.26) BS01 QBL 3.4.19.12 GO:0004843 ... Q93009 N/A
    787726 8d4z:B (2.26) BS01 QBL 3.4.19.12 GO:0004843 ... Q93009 N/A
    787727 8d50:H (4.32) BS01 MAN N/A N/A N/A N/A
    787728 8d50:L (4.32) BS01 MAN N/A N/A N/A N/A
    787729 8d50:L (4.32) BS02 MAN N/A N/A N/A N/A
    787730 8d51:A (2.0) BS01 peptide ? GO:0004930 ... Q03431 37587780
    787731 8d52:A (2.02) BS01 peptide ? GO:0004930 ... Q03431 37587780
    787732 8d53:D (3.24) BS01 BMA N/A N/A N/A N/A
    787733 8d53:G (3.24) BS01 MAN N/A GO:0019031 ... N/A N/A
    787734 8d53:L (3.24) BS01 MAN N/A N/A N/A N/A
    787735 8d53:L (3.24) BS02 MAN N/A N/A N/A N/A
    787736 8d59:A (2.26) BS01 SAM 2.1.1.-
    2.1.1.33
    GO:0006400 ... Q9UBP6 36599982
    787737 8d5b:A (1.93) BS01 SAH 2.1.1.-
    2.1.1.33
    GO:0006400 ... Q9UBP6 36599982
    787738 8d5d:A (1.54) BS01 5DK 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787739 8d5d:A (1.54) BS02 5DK 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787740 8d5d:B (1.54) BS01 5DK 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787741 8d5d:B (1.54) BS02 5DK 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787742 8d5e:A (2.46) BS01 peptide ? N/A P01900 38085776
    787743 8d5f:A (2.31) BS01 peptide ? N/A P01900 38085776
    787744 8d5g:A (2.78) BS01 HH2 N/A GO:0004156 ... N/A N/A
    787745 8d5g:B (2.78) BS01 HH2 N/A GO:0004156 ... N/A N/A
    787746 8d5h:A (1.72) BS01 HHR N/A GO:0004156 ... N/A N/A
    787747 8d5h:B (1.72) BS01 HHR N/A GO:0004156 ... N/A N/A
    787748 8d5i:A (1.82) BS01 PT1 N/A GO:0004156 ... N/A N/A
    787749 8d5i:B (1.82) BS01 POP N/A GO:0004156 ... N/A N/A
    787750 8d5i:B (1.82) BS02 PT1 N/A GO:0004156 ... N/A N/A
    787751 8d5j:A (1.95) BS01 peptide ? N/A P01902 N/A
    787752 8d5k:A (2.066) BS01 peptide ? N/A P01902 38085776
    787753 8d5n:A (1.8) BS01 peptide ? N/A P01897 35967379
    787754 8d5n:C (1.8) BS01 peptide ? N/A P01897 35967379
    787755 8d5q:A (2.501) BS01 peptide N/A N/A N/A 35967379
    787756 8d5q:B (2.501) BS01 peptide N/A N/A N/A 35967379
    787757 8d5q:C (2.501) BS01 peptide ? N/A P01897 35967379
    787758 8d5r:A (1.44) BS01 ORX 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787759 8d5r:A (1.44) BS02 PUT 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787760 8d5r:B (1.44) BS01 PUT 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787761 8d5r:B (1.44) BS02 ORX 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787762 8d5v:A (1.8) BS01 SF4 ? GO:0003677 ... P9WF37 N/A
    787763 8d5v:C (1.8) BS01 SF4 ? GO:0003677 ... P9WF37 N/A
    787764 8d63:A (3.14) BS01 LBN ? GO:0004888 ... E0SJQ4 36385237
    787765 8d63:B (3.14) BS01 LBN ? GO:0004888 ... E0SJQ4 36385237
    787766 8d63:C (3.14) BS01 LBN ? GO:0004888 ... E0SJQ4 36385237
    787767 8d63:D (3.14) BS01 LBN ? GO:0004888 ... E0SJQ4 36385237
    787768 8d63:E (3.14) BS01 LBN ? GO:0004888 ... E0SJQ4 36385237
    787769 8d64:A (3.14) BS01 DHL ? GO:0004888 ... E0SJQ4 36385237
    787770 8d64:B (3.14) BS01 DHL ? GO:0004888 ... E0SJQ4 36385237
    787771 8d64:C (3.14) BS01 DHL ? GO:0004888 ... E0SJQ4 36385237
    787772 8d64:D (3.14) BS01 DHL ? GO:0004888 ... E0SJQ4 36385237
    787773 8d64:E (3.14) BS01 DHL ? GO:0004888 ... E0SJQ4 36385237
    787774 8d65:A (3.47) BS01 PGW ? GO:0004888 ... E0SJQ4 36385237
    787775 8d65:B (3.47) BS01 PGW ? GO:0004888 ... E0SJQ4 36385237
    787776 8d65:C (3.47) BS01 PGW ? GO:0004888 ... E0SJQ4 36385237
    787777 8d65:D (3.47) BS01 PGW ? GO:0004888 ... E0SJQ4 36385237
    787778 8d65:E (3.47) BS01 PGW ? GO:0004888 ... E0SJQ4 36385237
    787779 8d66:A (3.14) BS01 PGW ? GO:0004888 ... E0SJQ4 36385237
    787780 8d66:A (3.14) BS02 DHL ? GO:0004888 ... E0SJQ4 36385237
    787781 8d66:A (3.14) BS03 PGW ? GO:0004888 ... E0SJQ4 36385237
    787782 8d66:B (3.14) BS01 PGW ? GO:0004888 ... E0SJQ4 36385237
    787783 8d66:B (3.14) BS02 DHL ? GO:0004888 ... E0SJQ4 36385237
    787784 8d66:B (3.14) BS03 PGW ? GO:0004888 ... E0SJQ4 36385237
    787785 8d66:C (3.14) BS01 PGW ? GO:0004888 ... E0SJQ4 36385237
    787786 8d66:C (3.14) BS02 DHL ? GO:0004888 ... E0SJQ4 36385237
    787787 8d66:C (3.14) BS03 PGW ? GO:0004888 ... E0SJQ4 36385237
    787788 8d66:D (3.14) BS01 PGW ? GO:0004888 ... E0SJQ4 36385237
    787789 8d66:D (3.14) BS02 DHL ? GO:0004888 ... E0SJQ4 36385237
    787790 8d66:D (3.14) BS03 PGW ? GO:0004888 ... E0SJQ4 36385237
    787791 8d66:E (3.14) BS01 PGW ? GO:0004888 ... E0SJQ4 36385237
    787792 8d66:E (3.14) BS02 PGW ? GO:0004888 ... E0SJQ4 36385237
    787793 8d66:E (3.14) BS03 DHL ? GO:0004888 ... E0SJQ4 36385237
    787794 8d67:A (3.3) BS01 DHL ? GO:0004888 ... E0SJQ4 36385237
    787795 8d67:B (3.3) BS01 DHL ? GO:0004888 ... E0SJQ4 36385237
    787796 8d67:C (3.3) BS01 DHL ? GO:0004888 ... E0SJQ4 36385237
    787797 8d67:D (3.3) BS01 DHL ? GO:0004888 ... E0SJQ4 36385237
    787798 8d67:E (3.3) BS01 DHL ? GO:0004888 ... E0SJQ4 36385237
    787799 8d68:A () BS01 PGW N/A N/A N/A N/A
    787800 8d68:A () BS02 DHL N/A N/A N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).