SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    787801 8d68:B () BS01 PGW N/A N/A N/A N/A
    787802 8d68:B () BS02 DHL N/A N/A N/A N/A
    787803 8d68:C () BS01 PGW N/A N/A N/A N/A
    787804 8d68:C () BS02 DHL N/A N/A N/A N/A
    787805 8d68:D () BS01 PGW N/A N/A N/A N/A
    787806 8d68:D () BS02 DHL N/A N/A N/A N/A
    787807 8d68:E () BS01 PGW N/A N/A N/A N/A
    787808 8d68:E () BS02 DHL N/A N/A N/A N/A
    787809 8d6c:A (2.2) BS01 QGR 2.7.11.1 GO:0004672 ... Q99640 35880755
    787810 8d6c:B (2.2) BS01 QGR 2.7.11.1 GO:0004672 ... Q99640 35880755
    787811 8d6d:A (2.35) BS01 QGY 2.7.11.1 GO:0004672 ... Q99640 35880755
    787812 8d6d:B (2.35) BS01 QGY 2.7.11.1 GO:0004672 ... Q99640 35880755
    787813 8d6e:A (2.15) BS01 QGI 2.7.11.1 GO:0004672 ... Q99640 35880755
    787814 8d6e:B (2.15) BS01 QGI 2.7.11.1 GO:0004672 ... Q99640 35880755
    787815 8d6f:A (2.49) BS01 QG5 2.7.11.1 GO:0004672 ... Q99640 35880755
    787816 8d6f:B (2.49) BS01 QG5 2.7.11.1 GO:0004672 ... Q99640 35880755
    787817 8d6h:A (1.6) BS01 RH6 ? GO:0001523 ... P50120 36722993
    787818 8d6j:A (2.5) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 37082939
    787819 8d6j:A (2.5) BS02 MG 3.1.26.n2 GO:0000340 ... Q9UKV8 37082939
    787820 8d6k:A (2.73) BS01 RT6 2.4.99.16 GO:0004553 ... Q9L1K2 36157042
    787821 8d6k:B (2.73) BS01 RT6 2.4.99.16 GO:0004553 ... Q9L1K2 36157042
    787822 8d6l:A (1.69) BS01 RH6 ? GO:0001523 ... P50120 36722993
    787823 8d6m:A (2.0) BS01 9SL N/A N/A N/A 36279441
    787824 8d6n:A (1.42) BS01 RH6 ? GO:0001523 ... P50120 36722993
    787825 8d6o:A (2.2) BS01 QDX N/A N/A N/A 36279441
    787826 8d6s:A (2.6) BS01 9SL ? GO:0005615 ... P31226 36279441
    787827 8d6s:B (2.6) BS01 9SL ? GO:0005615 ... P31226 36279441
    787828 8d6t:A (2.15) BS01 9SL ? GO:0005615 ... P31226 36279441
    787829 8d6t:B (2.15) BS01 9SL ? GO:0005615 ... P31226 36279441
    787830 8d6u:A (2.65) BS01 QDX ? GO:0005615 ... P31226 36279441
    787831 8d6u:B (2.65) BS01 QDX ? GO:0005615 ... P31226 36279441
    787832 8d6v:C (3.2) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787833 8d6v:C (3.2) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787834 8d6v:D (3.2) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787835 8d6v:D (3.2) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787836 8d6v:E (3.2) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787837 8d6v:E (3.2) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787838 8d6v:F (3.2) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787839 8d6v:F (3.2) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787840 8d6v:G (3.2) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787841 8d6v:G (3.2) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787842 8d6v:H (3.2) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787843 8d6v:H (3.2) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787844 8d6v:I (3.2) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787845 8d6v:I (3.2) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787846 8d6w:C (3.0) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787847 8d6w:C (3.0) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787848 8d6w:D (3.0) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787849 8d6w:D (3.0) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787850 8d6w:E (3.0) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787851 8d6w:E (3.0) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787852 8d6w:F (3.0) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787853 8d6w:F (3.0) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787854 8d6w:G (3.0) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787855 8d6w:G (3.0) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787856 8d6w:H (3.0) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787857 8d6w:H (3.0) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787858 8d6w:I (3.0) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787859 8d6w:I (3.0) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787860 8d6x:G (3.2) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787861 8d6x:H (3.2) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787862 8d6x:H (3.2) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787863 8d6x:I (3.2) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787864 8d6x:I (3.2) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787865 8d6x:l (3.2) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787866 8d6x:l (3.2) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787867 8d6x:m (3.2) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787868 8d6x:m (3.2) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787869 8d6x:n (3.2) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787870 8d6x:n (3.2) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787871 8d6x:o (3.2) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787872 8d6x:o (3.2) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787873 8d6y:G (10.0) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787874 8d6y:G (10.0) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787875 8d6y:H (10.0) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787876 8d6y:H (10.0) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787877 8d6y:I (10.0) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787878 8d6y:I (10.0) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787879 8d6y:l (10.0) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787880 8d6y:l (10.0) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787881 8d6y:m (10.0) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787882 8d6y:m (10.0) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787883 8d6y:n (10.0) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787884 8d6y:n (10.0) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787885 8d6y:o (10.0) BS01 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787886 8d6y:o (10.0) BS02 peptide 3.4.25.1 GO:0000502 ... P9WHU1 35993699
    787887 8d6z:A (2.3) BS01 peptide N/A N/A N/A 35857439
    787888 8d6z:B (2.3) BS01 peptide N/A N/A N/A 35857439
    787889 8d6z:C (2.3) BS01 peptide N/A N/A N/A 35857439
    787890 8d6z:D (2.3) BS01 peptide N/A N/A N/A 35857439
    787891 8d6z:E (2.3) BS01 peptide N/A N/A N/A 35857439
    787892 8d6z:F (2.3) BS01 peptide N/A N/A N/A 35857439
    787893 8d6z:G (2.3) BS01 peptide N/A N/A N/A 35857439
    787894 8d6z:I (2.3) BS01 peptide N/A N/A N/A 35857439
    787895 8d71:A (2.5) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 37082939
    787896 8d73:A (2.17) BS01 QCR 2.7.10.1 GO:0004672 ... P00533 35838760
    787897 8d73:B (2.17) BS01 QCR 2.7.10.1 GO:0004672 ... P00533 35838760
    787898 8d76:A (2.4) BS01 QFO 2.7.10.1 GO:0004672 ... P00533 35838760
    787899 8d76:B (2.4) BS01 QFO 2.7.10.1 GO:0004672 ... P00533 35838760
    787900 8d7m:A (2.25) BS01 peptide 2.7.11.1
    2.7.11.26
    GO:0004672 ... P48730 37207626
    787901 8d7m:B (2.25) BS01 peptide 2.7.11.1
    2.7.11.26
    GO:0004672 ... P48730 37207626
    787902 8d7n:A (1.66) BS01 peptide 2.7.11.1
    2.7.11.26
    GO:0004672 ... P48730 37207626
    787903 8d7n:B (1.66) BS01 peptide 2.7.11.1
    2.7.11.26
    GO:0004672 ... P48730 37207626
    787904 8d7o:A (1.65) BS01 peptide 2.7.11.1
    2.7.11.26
    GO:0004672 ... P48730 37207626
    787905 8d7o:B (1.65) BS01 peptide 2.7.11.1
    2.7.11.26
    GO:0004672 ... P48730 37207626
    787906 8d7p:A (2.25) BS01 peptide 2.7.11.1
    2.7.11.26
    GO:0004672 ... P48730 37207626
    787907 8d7p:B (2.25) BS01 peptide 2.7.11.1
    2.7.11.26
    GO:0004672 ... P48730 37207626
    787908 8d7u:B (3.1) BS01 ZN ? GO:0005515 ... Q96SW2 36378961
    787909 8d7u:B (3.1) BS02 QFC ? GO:0005515 ... Q96SW2 36378961
    787910 8d7v:B (3.2) BS01 ZN ? GO:0005515 ... Q96SW2 36378961
    787911 8d7v:B (3.2) BS02 QFC ? GO:0005515 ... Q96SW2 36378961
    787912 8d7w:B (3.1) BS01 ZN ? GO:0005515 ... Q96SW2 36378961
    787913 8d7w:B (3.1) BS02 QFC ? GO:0005515 ... Q96SW2 36378961
    787914 8d7x:B (3.4) BS01 ZN ? GO:0005515 ... Q96SW2 36378961
    787915 8d7y:B (3.4) BS01 ZN ? GO:0005515 ... Q96SW2 36378961
    787916 8d7z:B (3.1) BS01 peptide ? GO:0005515 ... Q96SW2 36378961
    787917 8d7z:B (3.1) BS02 ZN ? GO:0005515 ... Q96SW2 36378961
    787918 8d7z:B (3.1) BS03 QFC ? GO:0005515 ... Q96SW2 36378961
    787919 8d80:B (3.6) BS01 peptide ? GO:0005515 ... Q96SW2 36378961
    787920 8d80:B (3.6) BS02 ZN ? GO:0005515 ... Q96SW2 36378961
    787921 8d80:B (3.6) BS03 8W7 ? GO:0005515 ... Q96SW2 36378961
    787922 8d81:B (3.9) BS01 ZN ? GO:0005515 ... Q96SW2 36378961
    787923 8d81:B (3.9) BS02 Y70 ? GO:0005515 ... Q96SW2 36378961
    787924 8d84:A (2.65) BS01 EPZ 2.5.1.7 GO:0003824 ... A0A3N3SEJ7 36649910
    787925 8d84:B (2.65) BS01 EPZ 2.5.1.7 GO:0003824 ... A0A3N3SEJ7 36649910
    787926 8d84:C (2.65) BS01 EPZ 2.5.1.7 GO:0003824 ... A0A3N3SEJ7 36649910
    787927 8d84:D (2.65) BS01 EPZ 2.5.1.7 GO:0003824 ... A0A3N3SEJ7 36649910
    787928 8d84:E (2.65) BS01 EPZ 2.5.1.7 GO:0003824 ... A0A3N3SEJ7 36649910
    787929 8d84:F (2.65) BS01 EPZ 2.5.1.7 GO:0003824 ... A0A3N3SEJ7 36649910
    787930 8d84:G (2.65) BS01 EPZ 2.5.1.7 GO:0003824 ... A0A3N3SEJ7 36649910
    787931 8d84:H (2.65) BS01 EPZ 2.5.1.7 GO:0003824 ... A0A3N3SEJ7 36649910
    787932 8d84:I (2.65) BS01 EPZ 2.5.1.7 GO:0003824 ... A0A3N3SEJ7 36649910
    787933 8d84:J (2.65) BS01 EPZ 2.5.1.7 GO:0003824 ... A0A3N3SEJ7 36649910
    787934 8d84:K (2.65) BS01 EPZ 2.5.1.7 GO:0003824 ... A0A3N3SEJ7 36649910
    787935 8d84:L (2.65) BS01 EPZ 2.5.1.7 GO:0003824 ... A0A3N3SEJ7 36649910
    787936 8d86:C (3.12) BS01 dna ? GO:0003677 ... P03856 37407546
    787937 8d86:C (3.12) BS02 dna ? GO:0003677 ... P03856 37407546
    787938 8d86:C (3.12) BS03 MG ? GO:0003677 ... P03856 37407546
    787939 8d88:A (1.41) BS01 N2P 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787940 8d88:A (1.41) BS02 R1O 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787941 8d88:B (1.41) BS01 N2P 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787942 8d88:B (1.41) BS02 R1O 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787943 8d88:B (1.41) BS03 R1O 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    787944 8d8i:A (2.504) BS01 peptide ? GO:0003677 ... P20393 36414641
    787945 8d8i:A (2.504) BS02 QFX ? GO:0003677 ... P20393 36414641
    787946 8d8j:0 (3.8) BS01 rna 2.1.1.- GO:0003735 ... P36056 36482135
    787947 8d8j:0 (3.8) BS02 SF4 2.1.1.- GO:0003735 ... P36056 36482135
    787948 8d8j:2 (3.8) BS01 rna ? GO:0003735 ... P38783 36482135
    787949 8d8j:5 (3.8) BS01 rna ? GO:0003735 ... P12686 36482135
    787950 8d8j:6 (3.8) BS01 rna ? GO:0003735 ... P53292 36482135
    787951 8d8j:D (3.8) BS01 rna ? GO:0003723 ... P27929 36482135
    787952 8d8j:E (3.8) BS01 rna ? GO:0003723 ... P33759 36482135
    787953 8d8j:F (3.8) BS01 rna ? GO:0003735 ... P28778 36482135
    787954 8d8j:H (3.8) BS01 rna ? GO:0003735 ... Q03799 36482135
    787955 8d8j:L (3.8) BS01 rna ? GO:0003735 ... P53732 36482135
    787956 8d8j:O (3.8) BS01 rna ? GO:0003735 ... P21771 36482135
    787957 8d8j:P (3.8) BS01 rna ? GO:0003735 ... Q02608 36482135
    787958 8d8j:Q (3.8) BS01 rna ? GO:0003735 ... Q03246 36482135
    787959 8d8j:R (3.8) BS01 rna ? GO:0003735 ... P40033 36482135
    787960 8d8j:V (3.8) BS01 rna ? GO:0003735 ... P17558 36482135
    787961 8d8j:d (3.8) BS01 rna ? GO:0000002 ... P48237 36482135
    787962 8d8k:0 (3.13) BS01 rna 2.1.1.- GO:0003735 ... P36056 36482135
    787963 8d8k:0 (3.13) BS02 SF4 2.1.1.- GO:0003735 ... P36056 36482135
    787964 8d8k:2 (3.13) BS01 rna ? GO:0003735 ... P38783 36482135
    787965 8d8k:3 (3.13) BS01 rna ? GO:0003735 ... P47141 36482135
    787966 8d8k:5 (3.13) BS01 rna ? GO:0003735 ... P12686 36482135
    787967 8d8k:6 (3.13) BS01 rna ? GO:0003735 ... P53292 36482135
    787968 8d8k:A (3.13) BS01 rna ? GO:0003735 ... Q02950 36482135
    787969 8d8k:B (3.13) BS01 rna ? GO:0003735 ... P32902 36482135
    787970 8d8k:B (3.13) BS02 MG ? GO:0003735 ... P32902 36482135
    787971 8d8k:C (3.13) BS01 rna ? GO:0003735 ... P02381 36482135
    787972 8d8k:D (3.13) BS01 rna ? GO:0003723 ... P27929 36482135
    787973 8d8k:E (3.13) BS01 rna ? GO:0003723 ... P33759 36482135
    787974 8d8k:F (3.13) BS01 rna ? GO:0003735 ... P28778 36482135
    787975 8d8k:G (3.13) BS01 rna ? GO:0000028 ... P47150 36482135
    787976 8d8k:H (3.13) BS01 rna ? GO:0003735 ... Q03799 36482135
    787977 8d8k:I (3.13) BS01 rna ? GO:0003723 ... P38120 36482135
    787978 8d8k:J (3.13) BS01 rna ? GO:0003735 ... Q03201 36482135
    787979 8d8k:K (3.13) BS01 rna ? GO:0003735 ... P42847 36482135
    787980 8d8k:L (3.13) BS01 rna ? GO:0003735 ... P53732 36482135
    787981 8d8k:M (3.13) BS01 rna ? GO:0003676 ... P53937 36482135
    787982 8d8k:N (3.13) BS01 rna ? GO:0003735 ... P10663 36482135
    787983 8d8k:O (3.13) BS01 rna ? GO:0003735 ... P21771 36482135
    787984 8d8k:P (3.13) BS01 rna ? GO:0003735 ... Q02608 36482135
    787985 8d8k:Q (3.13) BS01 rna ? GO:0003735 ... Q03246 36482135
    787986 8d8k:R (3.13) BS01 rna ? GO:0003735 ... P40033 36482135
    787987 8d8k:S (3.13) BS01 rna ? GO:0000028 ... P53733 36482135
    787988 8d8k:T (3.13) BS01 rna ? GO:0003735 ... P38175 36482135
    787989 8d8k:U (3.13) BS01 rna ? GO:0003735 ... P40496 36482135
    787990 8d8k:V (3.13) BS01 rna ? GO:0003735 ... P17558 36482135
    787991 8d8k:W (3.13) BS01 rna ? GO:0003735 ... Q01163 36482135
    787992 8d8k:W (3.13) BS02 ATP ? GO:0003735 ... Q01163 36482135
    787993 8d8k:X (3.13) BS01 rna ? GO:0003735 ... P53305 36482135
    787994 8d8k:Y (3.13) BS01 rna ? GO:0003735 ... Q03976 36482135
    787995 8d8k:Z (3.13) BS01 rna ? GO:0003735 ... O75012 36482135
    787996 8d8k:d (3.13) BS01 rna ? GO:0000002 ... P48237 36482135
    787997 8d8l:0 (2.6) BS01 rna 2.1.1.- GO:0003735 ... P36056 36482135
    787998 8d8l:0 (2.6) BS02 SF4 2.1.1.- GO:0003735 ... P36056 36482135
    787999 8d8l:2 (2.6) BS01 rna ? GO:0003735 ... P38783 36482135
    788000 8d8l:3 (2.6) BS01 rna ? GO:0003735 ... P47141 36482135

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).