SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 3932 3933 3934 3935 3936 3937 3938 3939 3940 3941 3942 3943 3944 3945 3946 3947 3948 3949 3950 3951 3952 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    788201 8cq7:AH (3.2) BS03 ZN N/A GO:0003735 ... A0A8H6F171 N/A
    788202 8cq7:AI (3.2) BS01 rna N/A GO:0000463 ... A0A8H6F6B7 N/A
    788203 8cq7:AI (3.2) BS02 rna N/A GO:0000463 ... A0A8H6F6B7 N/A
    788204 8cq7:AI (3.2) BS03 MG N/A GO:0000463 ... A0A8H6F6B7 N/A
    788205 8cq7:AJ (3.2) BS01 rna N/A GO:0003735 ... P47834 N/A
    788206 8cq7:AJ (3.2) BS02 MG N/A GO:0003735 ... P47834 N/A
    788207 8cq7:AK (3.2) BS01 rna N/A GO:0000448 ... A0A1D8PF45 N/A
    788208 8cq7:AK (3.2) BS02 rna N/A GO:0000448 ... A0A1D8PF45 N/A
    788209 8cq7:AK (3.2) BS03 ZN N/A GO:0000448 ... A0A1D8PF45 N/A
    788210 8cq7:AL (3.2) BS01 rna N/A GO:0002181 ... A0A1D8PG16 N/A
    788211 8cq7:AM (3.2) BS01 rna N/A GO:0003735 ... Q96W55 N/A
    788212 8cq7:AM (3.2) BS02 rna N/A GO:0003735 ... Q96W55 N/A
    788213 8cq7:AM (3.2) BS03 MG N/A GO:0003735 ... Q96W55 N/A
    788214 8cq7:AN (3.2) BS01 rna N/A GO:0003735 ... A0A1D8PL68 N/A
    788215 8cq7:AN (3.2) BS02 ZN N/A GO:0003735 ... A0A1D8PL68 N/A
    788216 8cq7:AP (3.2) BS01 rna N/A GO:0003735 ... A0A8H6BR69 N/A
    788217 8cq7:AP (3.2) BS02 ZN N/A GO:0003735 ... A0A8H6BR69 N/A
    788218 8cq7:AP (3.2) BS03 MG N/A GO:0003735 ... A0A8H6BR69 N/A
    788219 8cq7:AQ (3.2) BS01 rna N/A GO:0003735 ... A0A1D8PP14 N/A
    788220 8cq7:AQ (3.2) BS02 ZN N/A GO:0003735 ... A0A1D8PP14 N/A
    788221 8cq7:AR (3.2) BS01 rna N/A GO:0001965 ... A0A8H6C3E7 N/A
    788222 8cq7:AW (3.2) BS01 rna N/A GO:0002181 ... A0A8H6F1X9 N/A
    788223 8cq7:AW (3.2) BS02 MG N/A GO:0002181 ... A0A8H6F1X9 N/A
    788224 8cq7:AW (3.2) BS03 MG N/A GO:0002181 ... A0A8H6F1X9 N/A
    788225 8cq7:AX (3.2) BS01 rna N/A GO:0000027 ... Q59LS1 N/A
    788226 8cq7:AY (3.2) BS01 rna N/A GO:0003735 ... A0A8H6F4H4 N/A
    788227 8cq7:AY (3.2) BS02 rna N/A GO:0003735 ... A0A8H6F4H4 N/A
    788228 8cq7:AZ (3.2) BS01 rna N/A GO:0000027 ... G1UAA6 N/A
    788229 8cq7:AZ (3.2) BS02 rna N/A GO:0000027 ... G1UAA6 N/A
    788230 8cq7:AZ (3.2) BS03 MG N/A GO:0000027 ... G1UAA6 N/A
    788231 8cq7:BA (3.2) BS01 rna N/A GO:0000027 ... Q9P834 N/A
    788232 8cq7:BB (3.2) BS01 rna N/A GO:0000463 ... A0A8H6BVN2 N/A
    788233 8cq7:BB (3.2) BS02 rna N/A GO:0000463 ... A0A8H6BVN2 N/A
    788234 8cq7:BB (3.2) BS03 MG N/A GO:0000463 ... A0A8H6BVN2 N/A
    788235 8cq7:BC (3.2) BS01 rna N/A GO:0003723 ... A0A8H6C337 N/A
    788236 8cq7:BC (3.2) BS02 rna N/A GO:0003723 ... A0A8H6C337 N/A
    788237 8cq7:BD (3.2) BS01 rna N/A GO:0002181 ... A0A8H6C3N3 N/A
    788238 8cq7:BE (3.2) BS01 rna N/A GO:0003735 ... Q5AIB8 N/A
    788239 8cq7:BE (3.2) BS02 rna N/A GO:0003735 ... Q5AIB8 N/A
    788240 8cq7:BE (3.2) BS03 MG N/A GO:0003735 ... Q5AIB8 N/A
    788241 8cq7:BF (3.2) BS01 rna N/A GO:0003735 ... A0A8H6F1S5 N/A
    788242 8cq7:BF (3.2) BS02 rna N/A GO:0003735 ... A0A8H6F1S5 N/A
    788243 8cq7:BG (3.2) BS01 rna N/A GO:0003723 ... A0A8H6F5V7 N/A
    788244 8cq7:BG (3.2) BS02 rna N/A GO:0003723 ... A0A8H6F5V7 N/A
    788245 8cq7:BH (3.2) BS01 rna N/A GO:0003723 ... A0A8H6F332 N/A
    788246 8cq7:BI (3.2) BS01 rna N/A GO:0002181 ... Q5A6R1 N/A
    788247 8cq7:BI (3.2) BS02 rna N/A GO:0002181 ... Q5A6R1 N/A
    788248 8cq7:BJ (3.2) BS01 rna N/A GO:0003729 ... A0A8H6BZ56 N/A
    788249 8cq7:BJ (3.2) BS02 MG N/A GO:0003729 ... A0A8H6BZ56 N/A
    788250 8cq7:BJ (3.2) BS03 MG N/A GO:0003729 ... A0A8H6BZ56 N/A
    788251 8cq7:BK (3.2) BS01 rna N/A GO:0002181 ... A0A8H6BUG0 N/A
    788252 8cq7:BK (3.2) BS02 rna N/A GO:0002181 ... A0A8H6BUG0 N/A
    788253 8cq7:BK (3.2) BS03 MG N/A GO:0002181 ... A0A8H6BUG0 N/A
    788254 8cq7:BL (3.2) BS01 rna N/A GO:0003723 ... A0A8H6C4Y1 N/A
    788255 8cq7:BM (3.2) BS01 rna N/A GO:0003723 ... A0A1D8PK40 N/A
    788256 8cq7:BM (3.2) BS02 rna N/A GO:0003723 ... A0A1D8PK40 N/A
    788257 8cq7:BN (3.2) BS01 rna N/A GO:0003735 ... A0A8H6BZJ3 N/A
    788258 8cq7:BN (3.2) BS02 rna N/A GO:0003735 ... A0A8H6BZJ3 N/A
    788259 8cq7:BO (3.2) BS01 rna N/A GO:0003735 ... A0A8H6F1C8 N/A
    788260 8cq7:BO (3.2) BS02 rna N/A GO:0003735 ... A0A8H6F1C8 N/A
    788261 8cq7:BP (3.2) BS01 rna N/A GO:0002181 ... A0A1D8PM41 N/A
    788262 8cq7:BQ (3.2) BS01 rna N/A GO:0003735 ... A0A8H6C444 N/A
    788263 8cq7:BQ (3.2) BS02 MG N/A GO:0003735 ... A0A8H6C444 N/A
    788264 8cq7:BR (3.2) BS01 rna N/A GO:0002181 ... A0A8H6C4U1 N/A
    788265 8cq7:BR (3.2) BS02 rna N/A GO:0002181 ... A0A8H6C4U1 N/A
    788266 8cq7:BS (3.2) BS01 rna N/A GO:0000027 ... A0A8H6F6A1 N/A
    788267 8cq7:BS (3.2) BS02 rna N/A GO:0000027 ... A0A8H6F6A1 N/A
    788268 8cq7:BS (3.2) BS03 MG N/A GO:0000027 ... A0A8H6F6A1 N/A
    788269 8cq7:BS (3.2) BS04 MG N/A GO:0000027 ... A0A8H6F6A1 N/A
    788270 8cq7:BT (3.2) BS01 rna N/A GO:0003723 ... A0A8H6F3X2 N/A
    788271 8cq7:BT (3.2) BS02 rna N/A GO:0003723 ... A0A8H6F3X2 N/A
    788272 8cq7:BU (3.2) BS01 rna N/A GO:0003735 ... Q9P843 N/A
    788273 8cq7:BV (3.2) BS01 rna N/A GO:0003723 ... A0A8H6BVY8 N/A
    788274 8cq7:BV (3.2) BS02 MG N/A GO:0003723 ... A0A8H6BVY8 N/A
    788275 8cq7:BW (3.2) BS01 rna N/A GO:0002181 ... A0A8H6F0G8 N/A
    788276 8cq7:BX (3.2) BS01 rna N/A GO:0003674 ... A0A1D8PM75 N/A
    788277 8cq7:BY (3.2) BS01 rna N/A GO:0002181 ... A0A8H6F1M1 N/A
    788278 8cq7:BZ (3.2) BS01 rna N/A GO:0003735 ... O94008 N/A
    788279 8cq7:BZ (3.2) BS02 MG N/A GO:0003735 ... O94008 N/A
    788280 8cq7:BZ (3.2) BS03 MG N/A GO:0003735 ... O94008 N/A
    788281 8cq7:BZ (3.2) BS04 MG N/A GO:0003735 ... O94008 N/A
    788282 8cq7:C (3.2) BS01 rna N/A GO:0000028 ... A0A8H6C395 N/A
    788283 8cq7:CA (3.2) BS01 rna N/A GO:0003735 ... A0A8H6BW57 N/A
    788284 8cq7:CA (3.2) BS02 MG N/A GO:0003735 ... A0A8H6BW57 N/A
    788285 8cq7:CB (3.2) BS01 rna N/A GO:0003735 ... A0A8H6F171 N/A
    788286 8cq7:CC (3.2) BS01 rna N/A GO:0000463 ... A0A8H6F6B7 N/A
    788287 8cq7:CC (3.2) BS02 rna N/A GO:0000463 ... A0A8H6F6B7 N/A
    788288 8cq7:CD (3.2) BS01 rna N/A GO:0003735 ... P47834 N/A
    788289 8cq7:CE (3.2) BS01 rna N/A GO:0000448 ... A0A1D8PF45 N/A
    788290 8cq7:CE (3.2) BS02 rna N/A GO:0000448 ... A0A1D8PF45 N/A
    788291 8cq7:CE (3.2) BS03 ZN N/A GO:0000448 ... A0A1D8PF45 N/A
    788292 8cq7:CF (3.2) BS01 rna N/A GO:0002181 ... A0A1D8PG16 N/A
    788293 8cq7:CG (3.2) BS01 rna N/A GO:0003735 ... Q96W55 N/A
    788294 8cq7:CG (3.2) BS02 rna N/A GO:0003735 ... Q96W55 N/A
    788295 8cq7:CH (3.2) BS01 rna N/A GO:0003735 ... A0A1D8PL68 N/A
    788296 8cq7:CH (3.2) BS02 ZN N/A GO:0003735 ... A0A1D8PL68 N/A
    788297 8cq7:CJ (3.2) BS01 rna N/A GO:0003735 ... A0A8H6BR69 N/A
    788298 8cq7:CJ (3.2) BS02 3K5 N/A GO:0003735 ... A0A8H6BR69 N/A
    788299 8cq7:CJ (3.2) BS03 ZN N/A GO:0003735 ... A0A8H6BR69 N/A
    788300 8cq7:CK (3.2) BS01 rna N/A GO:0003735 ... A0A1D8PP14 N/A
    788301 8cq7:CK (3.2) BS02 ZN N/A GO:0003735 ... A0A1D8PP14 N/A
    788302 8cq7:CL (3.2) BS01 rna N/A GO:0000723 ... A0A1D8PK71 N/A
    788303 8cq7:CL (3.2) BS02 rna N/A GO:0000723 ... A0A1D8PK71 N/A
    788304 8cq7:CN (3.2) BS01 rna N/A GO:0000028 ... A0A8H6C395 N/A
    788305 8cq7:CO (3.2) BS01 rna N/A GO:0003735 ... A0A8H6C387 N/A
    788306 8cq7:CP (3.2) BS01 rna N/A GO:0000054 ... A0A8H6BZ90 N/A
    788307 8cq7:CQ (3.2) BS01 rna N/A GO:0003723 ... A0A8H6BYS1 N/A
    788308 8cq7:CQ (3.2) BS02 MG N/A GO:0003723 ... A0A8H6BYS1 N/A
    788309 8cq7:CR (3.2) BS01 rna N/A GO:0002181 ... A0A1D8PCI6 N/A
    788310 8cq7:CS (3.2) BS01 rna N/A GO:0003723 ... A0A8H6BS29 N/A
    788311 8cq7:CT (3.2) BS01 rna N/A GO:0003735 ... A0A8H6BZ37 N/A
    788312 8cq7:CU (3.2) BS01 rna N/A GO:0003735 ... A0A8H6C655 N/A
    788313 8cq7:CV (3.2) BS01 rna N/A GO:0003735 ... A0A8H6F0S0 N/A
    788314 8cq7:CV (3.2) BS02 rna N/A GO:0003735 ... A0A8H6F0S0 N/A
    788315 8cq7:CW (3.2) BS01 rna N/A GO:0003723 ... A0A8H6F1X2 N/A
    788316 8cq7:CW (3.2) BS02 MG N/A GO:0003723 ... A0A8H6F1X2 N/A
    788317 8cq7:CX (3.2) BS01 rna N/A GO:0003723 ... A0A8H6BWQ8 N/A
    788318 8cq7:CY (3.2) BS01 rna N/A GO:0003674 ... A0A1D8PN83 N/A
    788319 8cq7:CY (3.2) BS02 MG N/A GO:0003674 ... A0A1D8PN83 N/A
    788320 8cq7:CZ (3.2) BS01 rna N/A GO:0000028 ... A0A8H6C3A1 N/A
    788321 8cq7:D (3.2) BS01 rna N/A GO:0003735 ... A0A8H6C387 N/A
    788322 8cq7:DA (3.2) BS01 rna N/A GO:0003735 ... A0A8H6F4G0 N/A
    788323 8cq7:DB (3.2) BS01 rna N/A GO:0003735 ... A0A8H6F0V4 N/A
    788324 8cq7:DB (3.2) BS02 MG N/A GO:0003735 ... A0A8H6F0V4 N/A
    788325 8cq7:DC (3.2) BS01 rna N/A GO:0003723 ... A0A1D8PK22 N/A
    788326 8cq7:DC (3.2) BS02 MG N/A GO:0003723 ... A0A1D8PK22 N/A
    788327 8cq7:DD (3.2) BS01 rna N/A GO:0000462 ... O94017 N/A
    788328 8cq7:DE (3.2) BS01 rna N/A GO:0000028 ... A0A8H6BTR7 N/A
    788329 8cq7:DF (3.2) BS01 rna N/A GO:0000054 ... A0A8H6F3Y8 N/A
    788330 8cq7:DG (3.2) BS01 rna N/A GO:0000028 ... A0A8H6C5L4 N/A
    788331 8cq7:DG (3.2) BS02 MG N/A GO:0000028 ... A0A8H6C5L4 N/A
    788332 8cq7:DG (3.2) BS03 MG N/A GO:0000028 ... A0A8H6C5L4 N/A
    788333 8cq7:DH (3.2) BS01 rna N/A GO:0000462 ... A0A8H6BYJ9 N/A
    788334 8cq7:DI (3.2) BS01 rna N/A GO:0000461 ... Q9P844 N/A
    788335 8cq7:DJ (3.2) BS01 rna N/A GO:0003735 ... A0A8H6F0N4 N/A
    788336 8cq7:DJ (3.2) BS02 MG N/A GO:0003735 ... A0A8H6F0N4 N/A
    788337 8cq7:DJ (3.2) BS03 MG N/A GO:0003735 ... A0A8H6F0N4 N/A
    788338 8cq7:DK (3.2) BS01 rna N/A GO:0003735 ... A0A8H6F0V0 N/A
    788339 8cq7:DL (3.2) BS01 rna N/A GO:0003735 ... A0A8H6C3K1 N/A
    788340 8cq7:DM (3.2) BS01 rna N/A N/A A0A8H6EZQ8 N/A
    788341 8cq7:DN (3.2) BS01 rna N/A GO:0003729 ... A0A8H6BTS1 N/A
    788342 8cq7:DN (3.2) BS02 ZN N/A GO:0003729 ... A0A8H6BTS1 N/A
    788343 8cq7:DO (3.2) BS01 rna N/A GO:0003735 ... A0A8H6BWE6 N/A
    788344 8cq7:DP (3.2) BS01 rna N/A GO:0000028 ... A0A8H6C0A5 N/A
    788345 8cq7:DQ (3.2) BS01 rna N/A GO:0002181 ... A0A1D8PTR4 N/A
    788346 8cq7:DQ (3.2) BS02 MG N/A GO:0002181 ... A0A1D8PTR4 N/A
    788347 8cq7:DQ (3.2) BS03 ZN N/A GO:0002181 ... A0A1D8PTR4 N/A
    788348 8cq7:DR (3.2) BS01 rna N/A GO:0003735 ... A0A1D8PSK2 N/A
    788349 8cq7:DS (3.2) BS01 rna N/A GO:0000028 ... Q5A109 N/A
    788350 8cq7:DS (3.2) BS02 ZN N/A GO:0000028 ... Q5A109 N/A
    788351 8cq7:DT (3.2) BS01 rna N/A GO:0001965 ... A0A8H6C3E7 N/A
    788352 8cq7:E (3.2) BS01 rna N/A GO:0000054 ... A0A8H6BZ90 N/A
    788353 8cq7:F (3.2) BS01 rna N/A GO:0003723 ... A0A8H6BYS1 N/A
    788354 8cq7:G (3.2) BS01 rna N/A GO:0002181 ... A0A1D8PCI6 N/A
    788355 8cq7:G (3.2) BS02 MG N/A GO:0002181 ... A0A1D8PCI6 N/A
    788356 8cq7:H (3.2) BS01 rna N/A GO:0003723 ... A0A8H6BS29 N/A
    788357 8cq7:H (3.2) BS02 MG N/A GO:0003723 ... A0A8H6BS29 N/A
    788358 8cq7:I (3.2) BS01 rna N/A GO:0003735 ... A0A8H6BZ37 N/A
    788359 8cq7:I (3.2) BS02 MG N/A GO:0003735 ... A0A8H6BZ37 N/A
    788360 8cq7:J (3.2) BS01 rna N/A GO:0003735 ... A0A8H6C655 N/A
    788361 8cq7:J (3.2) BS02 MG N/A GO:0003735 ... A0A8H6C655 N/A
    788362 8cq7:K (3.2) BS01 rna N/A GO:0003735 ... A0A8H6F0S0 N/A
    788363 8cq7:K (3.2) BS02 rna N/A GO:0003735 ... A0A8H6F0S0 N/A
    788364 8cq7:K (3.2) BS03 MG N/A GO:0003735 ... A0A8H6F0S0 N/A
    788365 8cq7:L (3.2) BS01 rna N/A GO:0003723 ... A0A8H6F1X2 N/A
    788366 8cq7:L1 (3.2) BS01 rna N/A GO:0000055 ... A0A8H6F4E7 N/A
    788367 8cq7:M (3.2) BS01 rna N/A GO:0003723 ... A0A8H6BWQ8 N/A
    788368 8cq7:N (3.2) BS01 rna N/A GO:0003674 ... A0A1D8PN83 N/A
    788369 8cq7:O (3.2) BS01 rna N/A GO:0000028 ... A0A8H6C3A1 N/A
    788370 8cq7:P (3.2) BS01 rna N/A GO:0003735 ... A0A8H6F4G0 N/A
    788371 8cq7:P0 (3.2) BS01 rna N/A GO:0000027 ... G1UA71 N/A
    788372 8cq7:P0 (3.2) BS02 MG N/A GO:0000027 ... G1UA71 N/A
    788373 8cq7:Q (3.2) BS01 rna N/A GO:0003735 ... A0A8H6F0V4 N/A
    788374 8cq7:Q (3.2) BS02 MG N/A GO:0003735 ... A0A8H6F0V4 N/A
    788375 8cq7:R (3.2) BS01 rna N/A GO:0003723 ... A0A1D8PK22 N/A
    788376 8cq7:R (3.2) BS02 rna N/A GO:0003723 ... A0A1D8PK22 N/A
    788377 8cq7:R (3.2) BS03 MG N/A GO:0003723 ... A0A1D8PK22 N/A
    788378 8cq7:S (3.2) BS01 rna N/A GO:0000462 ... O94017 N/A
    788379 8cq7:T (3.2) BS01 rna N/A GO:0000028 ... A0A8H6BTR7 N/A
    788380 8cq7:U (3.2) BS01 rna N/A GO:0000054 ... A0A8H6F3Y8 N/A
    788381 8cq7:V (3.2) BS01 rna N/A GO:0000028 ... A0A8H6C5L4 N/A
    788382 8cq7:W (3.2) BS01 rna N/A GO:0000462 ... A0A8H6BYJ9 N/A
    788383 8cq7:X (3.2) BS01 rna N/A GO:0000461 ... Q9P844 N/A
    788384 8cq7:Y (3.2) BS01 rna N/A GO:0003735 ... A0A8H6F0N4 N/A
    788385 8cq7:Y (3.2) BS02 MG N/A GO:0003735 ... A0A8H6F0N4 N/A
    788386 8cq7:Z (3.2) BS01 rna N/A GO:0003735 ... A0A8H6F0V0 N/A
    788387 8cq7:Z (3.2) BS02 MG N/A GO:0003735 ... A0A8H6F0V0 N/A
    788388 8cq7:a (3.2) BS01 rna N/A GO:0003735 ... A0A8H6C3K1 N/A
    788389 8cq7:b (3.2) BS01 rna N/A N/A A0A8H6EZQ8 N/A
    788390 8cq7:c (3.2) BS01 rna N/A GO:0003729 ... A0A8H6BTS1 N/A
    788391 8cq7:c (3.2) BS02 ZN N/A GO:0003729 ... A0A8H6BTS1 N/A
    788392 8cq7:c (3.2) BS03 MG N/A GO:0003729 ... A0A8H6BTS1 N/A
    788393 8cq7:d (3.2) BS01 rna N/A GO:0003735 ... A0A8H6BWE6 N/A
    788394 8cq7:e (3.2) BS01 rna N/A GO:0000028 ... A0A8H6C0A5 N/A
    788395 8cq7:f (3.2) BS01 rna N/A GO:0002181 ... A0A1D8PTR4 N/A
    788396 8cq7:f (3.2) BS02 ZN N/A GO:0002181 ... A0A1D8PTR4 N/A
    788397 8cq7:g (3.2) BS01 rna N/A GO:0003735 ... A0A1D8PSK2 N/A
    788398 8cq7:h (3.2) BS01 rna N/A GO:0000028 ... Q5A109 N/A
    788399 8cq7:i (3.2) BS01 rna N/A GO:0000723 ... A0A1D8PK71 N/A
    788400 8cq7:i (3.2) BS02 rna N/A GO:0000723 ... A0A1D8PK71 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).