SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    789001 8cre:c (3.0) BS01 rna N/A GO:0003729 ... A0A8H6BTS1 N/A
    789002 8cre:c (3.0) BS02 ZN N/A GO:0003729 ... A0A8H6BTS1 N/A
    789003 8cre:d (3.0) BS01 rna N/A GO:0003735 ... A0A8H6BWE6 N/A
    789004 8cre:e (3.0) BS01 rna N/A GO:0000028 ... A0A8H6C0A5 N/A
    789005 8cre:f (3.0) BS01 rna N/A GO:0002181 ... A0A1D8PTR4 N/A
    789006 8cre:f (3.0) BS02 ZN N/A GO:0002181 ... A0A1D8PTR4 N/A
    789007 8cre:g (3.0) BS01 rna N/A GO:0003735 ... A0A1D8PSK2 N/A
    789008 8cre:h (3.0) BS01 rna N/A GO:0000028 ... Q5A109 N/A
    789009 8cre:h (3.0) BS02 ZN N/A GO:0000028 ... Q5A109 N/A
    789010 8cre:i (3.0) BS01 rna N/A GO:0000723 ... A0A1D8PK71 N/A
    789011 8cre:i (3.0) BS02 rna N/A GO:0000723 ... A0A1D8PK71 N/A
    789012 8cre:i (3.0) BS03 MG N/A GO:0000723 ... A0A1D8PK71 N/A
    789013 8cre:j (3.0) BS01 rna N/A GO:0002181 ... A0A8H6F1X9 N/A
    789014 8cre:j (3.0) BS02 rna N/A GO:0002181 ... A0A8H6F1X9 N/A
    789015 8cre:j (3.0) BS03 MG N/A GO:0002181 ... A0A8H6F1X9 N/A
    789016 8cre:k (3.0) BS01 rna N/A GO:0000027 ... Q59LS1 N/A
    789017 8cre:k (3.0) BS02 MG N/A GO:0000027 ... Q59LS1 N/A
    789018 8cre:k (3.0) BS03 MG N/A GO:0000027 ... Q59LS1 N/A
    789019 8cre:k (3.0) BS04 MG N/A GO:0000027 ... Q59LS1 N/A
    789020 8cre:l (3.0) BS01 rna N/A GO:0003735 ... A0A8H6F4H4 N/A
    789021 8cre:l (3.0) BS02 rna N/A GO:0003735 ... A0A8H6F4H4 N/A
    789022 8cre:l1 (3.0) BS01 rna N/A GO:0000055 ... A0A8H6F4E7 N/A
    789023 8cre:m (3.0) BS01 rna N/A GO:0000027 ... G1UAA6 N/A
    789024 8cre:m (3.0) BS02 rna N/A GO:0000027 ... G1UAA6 N/A
    789025 8cre:n (3.0) BS01 rna N/A GO:0000027 ... Q9P834 N/A
    789026 8cre:o (3.0) BS01 rna N/A GO:0000463 ... A0A8H6BVN2 N/A
    789027 8cre:o (3.0) BS02 rna N/A GO:0000463 ... A0A8H6BVN2 N/A
    789028 8cre:p (3.0) BS01 rna N/A GO:0003723 ... A0A8H6C337 N/A
    789029 8cre:p (3.0) BS02 rna N/A GO:0003723 ... A0A8H6C337 N/A
    789030 8cre:p0 (3.0) BS01 rna N/A GO:0000027 ... G1UA71 N/A
    789031 8cre:q (3.0) BS01 rna N/A GO:0002181 ... A0A8H6C3N3 N/A
    789032 8cre:r (3.0) BS01 rna N/A GO:0003735 ... Q5AIB8 N/A
    789033 8cre:r (3.0) BS02 rna N/A GO:0003735 ... Q5AIB8 N/A
    789034 8cre:r (3.0) BS03 MG N/A GO:0003735 ... Q5AIB8 N/A
    789035 8cre:r (3.0) BS04 MG N/A GO:0003735 ... Q5AIB8 N/A
    789036 8cre:s (3.0) BS01 rna N/A GO:0003735 ... A0A8H6F1S5 N/A
    789037 8cre:s (3.0) BS02 rna N/A GO:0003735 ... A0A8H6F1S5 N/A
    789038 8cre:t (3.0) BS01 rna N/A GO:0003723 ... A0A8H6F5V7 N/A
    789039 8cre:t (3.0) BS02 rna N/A GO:0003723 ... A0A8H6F5V7 N/A
    789040 8cre:u (3.0) BS01 rna N/A GO:0003723 ... A0A8H6F332 N/A
    789041 8cre:v (3.0) BS01 rna N/A GO:0002181 ... Q5A6R1 N/A
    789042 8cre:v (3.0) BS02 rna N/A GO:0002181 ... Q5A6R1 N/A
    789043 8cre:v (3.0) BS03 MG N/A GO:0002181 ... Q5A6R1 N/A
    789044 8cre:v (3.0) BS04 MG N/A GO:0002181 ... Q5A6R1 N/A
    789045 8cre:w (3.0) BS01 rna N/A GO:0003729 ... A0A8H6BZ56 N/A
    789046 8cre:w (3.0) BS02 MG N/A GO:0003729 ... A0A8H6BZ56 N/A
    789047 8cre:x (3.0) BS01 rna N/A GO:0002181 ... A0A8H6BUG0 N/A
    789048 8cre:x (3.0) BS02 rna N/A GO:0002181 ... A0A8H6BUG0 N/A
    789049 8cre:x (3.0) BS03 MG N/A GO:0002181 ... A0A8H6BUG0 N/A
    789050 8cre:x (3.0) BS04 MG N/A GO:0002181 ... A0A8H6BUG0 N/A
    789051 8cre:y (3.0) BS01 rna N/A GO:0003723 ... A0A8H6C4Y1 N/A
    789052 8cre:z (3.0) BS01 rna N/A GO:0003723 ... A0A1D8PK40 N/A
    789053 8cre:z (3.0) BS02 rna N/A GO:0003723 ... A0A1D8PK40 N/A
    789054 8cre:z (3.0) BS03 MG N/A GO:0003723 ... A0A1D8PK40 N/A
    789055 8crf:A (1.15) BS01 NT9 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0DTC1 37446375
    789056 8crg:AA (1.49) BS01 ADP N/A N/A N/A 37418448
    789057 8crg:AA (1.49) BS02 ADP N/A N/A N/A 37418448
    789058 8crg:BA (1.49) BS01 ADP N/A N/A N/A 37418448
    789059 8crg:BA (1.49) BS02 ADP N/A N/A N/A 37418448
    789060 8crh:A (1.3) BS01 VIL 1.5.1.3 GO:0004146 ... A0A0L0P1H8 37428844
    789061 8crh:A (1.3) BS02 NDP 1.5.1.3 GO:0004146 ... A0A0L0P1H8 37428844
    789062 8crh:A (1.3) BS03 VIL 1.5.1.3 GO:0004146 ... A0A0L0P1H8 37428844
    789063 8crh:B (1.3) BS01 VIL 1.5.1.3 GO:0004146 ... A0A0L0P1H8 37428844
    789064 8crh:B (1.3) BS02 NDP 1.5.1.3 GO:0004146 ... A0A0L0P1H8 37428844
    789065 8crh:B (1.3) BS03 VIL 1.5.1.3 GO:0004146 ... A0A0L0P1H8 37428844
    789066 8cri:A (2.1) BS01 LPA 6.3.1.20 GO:0005737 ... A0A1D2IX29 37249408
    789067 8crj:A (2.6) BS01 LAQ 6.3.1.20 GO:0005737 ... A0A1D2IX29 37249408
    789068 8crk:B (1.1) BS01 OG3 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0DTD1 37446375
    789069 8crl:A (2.6) BS01 VK9 6.3.1.20 GO:0005737 ... A0A1D2IX29 37249408
    789070 8crl:A (2.6) BS02 CA 6.3.1.20 GO:0005737 ... A0A1D2IX29 37249408
    789071 8crm:A (1.42) BS01 OF6 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0DTC1 37446375
    789072 8crn:A (2.0) BS01 VJL ? GO:0005576 ... P22629 N/A
    789073 8crn:A (2.0) BS02 VJL ? GO:0005576 ... P22629 N/A
    789074 8crn:B (2.0) BS01 VJL ? GO:0005576 ... P22629 N/A
    789075 8crn:C (2.0) BS01 VJL ? GO:0005576 ... P22629 N/A
    789076 8crn:C (2.0) BS02 VJL ? GO:0005576 ... P22629 N/A
    789077 8crn:D (2.0) BS01 VJL ? GO:0005576 ... P22629 N/A
    789078 8crn:D (2.0) BS02 VJL ? GO:0005576 ... P22629 N/A
    789079 8cro:A (3.1) BS01 dna 2.7.7.6 GO:0000287 ... Q8U0M4 38709902
    789080 8cro:A (3.1) BS02 rna 2.7.7.6 GO:0000287 ... Q8U0M4 38709902
    789081 8cro:A (3.1) BS03 ZN 2.7.7.6 GO:0000287 ... Q8U0M4 38709902
    789082 8cro:A (3.1) BS04 ZN 2.7.7.6 GO:0000287 ... Q8U0M4 38709902
    789083 8cro:A (3.1) BS05 MG 2.7.7.6 GO:0000287 ... Q8U0M4 38709902
    789084 8cro:B (3.1) BS01 dna 2.7.7.6 GO:0003677 ... Q8U0M3 38709902
    789085 8cro:B (3.1) BS02 rna 2.7.7.6 GO:0003677 ... Q8U0M3 38709902
    789086 8cro:B (3.1) BS03 ZN 2.7.7.6 GO:0003677 ... Q8U0M3 38709902
    789087 8cro:C (3.1) BS01 dna 2.7.7.6 GO:0000428 ... Q8U0M5 38709902
    789088 8cro:N (3.1) BS01 ZN 2.7.7.6 GO:0000428 ... P60292 38709902
    789089 8cro:P (3.1) BS01 ZN 2.7.7.6 GO:0003677 ... Q8TZI3 38709902
    789090 8crp:A (2.0) BS01 VJL ? GO:0005576 ... P22629 N/A
    789091 8crp:B (2.0) BS01 VJL ? GO:0005576 ... P22629 N/A
    789092 8crp:B (2.0) BS02 VJL ? GO:0005576 ... P22629 N/A
    789093 8crp:C (2.0) BS01 VJL ? GO:0005576 ... P22629 N/A
    789094 8crp:D (2.0) BS01 VJL ? GO:0005576 ... P22629 N/A
    789095 8crp:D (2.0) BS02 VJL ? GO:0005576 ... P22629 N/A
    789096 8crq:B (3.2) BS01 CLR ? GO:0016020 ... P02724 35835865
    789097 8crq:C (3.2) BS01 CLR ? GO:0005452 ... P02730 35835865
    789098 8crq:C (3.2) BS02 PIO ? GO:0005452 ... P02730 35835865
    789099 8crq:C (3.2) BS03 PIO ? GO:0005452 ... P02730 35835865
    789100 8crq:E (3.2) BS01 CLR ? GO:0005452 ... P02730 35835865
    789101 8crq:E (3.2) BS02 PIO ? GO:0005452 ... P02730 35835865
    789102 8crr:C (3.0) BS01 CLR ? GO:0005452 ... P02730 35835865
    789103 8crr:C (3.0) BS02 PIO ? GO:0005452 ... P02730 35835865
    789104 8crr:C (3.0) BS03 PIO ? GO:0005452 ... P02730 35835865
    789105 8crr:E (3.0) BS01 PIO ? GO:0005452 ... P02730 35835865
    789106 8crr:E (3.0) BS02 CLR ? GO:0005452 ... P02730 35835865
    789107 8crr:E (3.0) BS03 PIO ? GO:0005452 ... P02730 35835865
    789108 8crs:A (2.04) BS01 ICS 1.18.6.1 GO:0009399 ... P07328 36841829
    789109 8crs:A (2.04) BS02 1N7 1.18.6.1 GO:0009399 ... P07328 36841829
    789110 8crs:A (2.04) BS03 CLF 1.18.6.1 GO:0009399 ... P07328 36841829
    789111 8crs:B (2.04) BS01 CLF 1.18.6.1 GO:0009399 ... P07329 36841829
    789112 8crs:B (2.04) BS02 1N7 1.18.6.1 GO:0009399 ... P07329 36841829
    789113 8crs:B (2.04) BS03 1N7 1.18.6.1 GO:0009399 ... P07329 36841829
    789114 8crs:B (2.04) BS04 FE 1.18.6.1 GO:0009399 ... P07329 36841829
    789115 8crs:B (2.04) BS05 FE 1.18.6.1 GO:0009399 ... P07329 36841829
    789116 8crs:C (2.04) BS01 1N7 1.18.6.1 GO:0009399 ... P07328 36841829
    789117 8crs:C (2.04) BS02 ICS 1.18.6.1 GO:0009399 ... P07328 36841829
    789118 8crs:C (2.04) BS03 CLF 1.18.6.1 GO:0009399 ... P07328 36841829
    789119 8crs:D (2.04) BS01 1N7 1.18.6.1 GO:0009399 ... P07329 36841829
    789120 8crs:D (2.04) BS02 FE 1.18.6.1 GO:0009399 ... P07329 36841829
    789121 8crs:D (2.04) BS03 FE 1.18.6.1 GO:0009399 ... P07329 36841829
    789122 8crs:D (2.04) BS04 CLF 1.18.6.1 GO:0009399 ... P07329 36841829
    789123 8crs:D (2.04) BS05 1N7 1.18.6.1 GO:0009399 ... P07329 36841829
    789124 8crt:C (3.0) BS01 CLR ? GO:0005452 ... P02730 35835865
    789125 8crt:E (3.0) BS01 CLR ? GO:0005452 ... P02730 35835865
    789126 8crv:A (1.6) BS01 OO9 2.7.2.2 GO:0005737 ... P13982 N/A
    789127 8crx:0 (2.78) BS01 rna ? GO:0003735 ... Q6A6J5 36864821
    789128 8crx:0 (2.78) BS02 ZN ? GO:0003735 ... Q6A6J5 36864821
    789129 8crx:1 (2.78) BS01 rna ? GO:0003735 ... Q6A5A1 36864821
    789130 8crx:1 (2.78) BS02 MG ? GO:0003735 ... Q6A5A1 36864821
    789131 8crx:2 (2.78) BS01 rna N/A GO:0003735 ... Q6A7V2 36864821
    789132 8crx:3 (2.78) BS01 rna ? GO:0003735 ... Q6A6Q7 36864821
    789133 8crx:4 (2.78) BS01 rna ? GO:0003735 ... Q6A8B4 36864821
    789134 8crx:4 (2.78) BS02 rna ? GO:0003735 ... Q6A8B4 36864821
    789135 8crx:4 (2.78) BS03 ZN ? GO:0003735 ... Q6A8B4 36864821
    789136 8crx:B (2.78) BS01 rna ? GO:0003735 ... Q6A7J7 36864821
    789137 8crx:D (2.78) BS01 rna ? GO:0003723 ... Q6A6R0 36864821
    789138 8crx:E (2.78) BS01 rna ? GO:0003723 ... Q6A6P3 36864821
    789139 8crx:F (2.78) BS01 rna ? GO:0003735 ... Q6A5M9 36864821
    789140 8crx:G (2.78) BS01 rna ? GO:0003676 ... Q6A6N2 36864821
    789141 8crx:H (2.78) BS01 rna ? GO:0003735 ... Q6A6P0 36864821
    789142 8crx:I (2.78) BS01 rna ? GO:0000049 ... Q6A6L4 36864821
    789143 8crx:J (2.78) BS01 rna ? GO:0003723 ... A0A2B7JN42 36864821
    789144 8crx:J (2.78) BS02 rna ? GO:0003723 ... A0A2B7JN42 36864821
    789145 8crx:K (2.78) BS01 rna ? GO:0003735 ... Q6A6Q9 36864821
    789146 8crx:L (2.78) BS01 rna ? GO:0000049 ... Q6A6L2 36864821
    789147 8crx:M (2.78) BS01 rna N/A GO:0000049 ... Q6A6M5 36864821
    789148 8crx:N (2.78) BS01 rna ? GO:0000049 ... Q6A6Q8 36864821
    789149 8crx:N (2.78) BS02 rna ? GO:0000049 ... Q6A6Q8 36864821
    789150 8crx:O (2.78) BS01 rna ? GO:0003735 ... Q6A7P5 36864821
    789151 8crx:O (2.78) BS02 rna ? GO:0003735 ... Q6A7P5 36864821
    789152 8crx:P (2.78) BS01 rna ? GO:0003735 ... Q6A7S4 36864821
    789153 8crx:Q (2.78) BS01 rna ? GO:0003735 ... Q6A6N5 36864821
    789154 8crx:R (2.78) BS01 rna ? GO:0003735 ... Q6A5N1 36864821
    789155 8crx:S (2.78) BS01 rna ? GO:0003735 ... Q6A6N9 36864821
    789156 8crx:S (2.78) BS02 ZN ? GO:0003735 ... Q6A6N9 36864821
    789157 8crx:T (2.78) BS01 rna ? GO:0003723 ... Q6A9B3 36864821
    789158 8crx:U (2.78) BS01 rna ? GO:0000028 ... Q6A6N0 36864821
    789159 8crx:X (2.78) BS01 rna N/A N/A Q6AAZ0 36864821
    789160 8crx:X (2.78) BS02 rna N/A N/A Q6AAZ0 36864821
    789161 8crx:c (2.78) BS01 rna ? GO:0002181 ... Q6A6M9 36864821
    789162 8crx:c (2.78) BS02 MG ? GO:0002181 ... Q6A6M9 36864821
    789163 8crx:d (2.78) BS01 rna ? GO:0003735 ... Q6A6M6 36864821
    789164 8crx:e (2.78) BS01 rna ? GO:0003735 ... A0A2B7I5M5 36864821
    789165 8crx:f (2.78) BS01 rna ? GO:0000049 ... A0A3E2DDM1 36864821
    789166 8crx:f (2.78) BS02 rna ? GO:0000049 ... A0A3E2DDM1 36864821
    789167 8crx:f (2.78) BS03 rna ? GO:0000049 ... A0A3E2DDM1 36864821
    789168 8crx:g (2.78) BS01 rna ? GO:0002181 ... Q6A6P1 36864821
    789169 8crx:i (2.78) BS01 rna ? GO:0003729 ... A0A2B7I6I7 36864821
    789170 8crx:j (2.78) BS01 rna ? GO:0003735 ... A0A2B7JMZ8 36864821
    789171 8crx:j (2.78) BS02 rna ? GO:0003735 ... A0A2B7JMZ8 36864821
    789172 8crx:k (2.78) BS01 rna ? GO:0003735 ... Q6A6P5 36864821
    789173 8crx:k (2.78) BS02 MG ? GO:0003735 ... Q6A6P5 36864821
    789174 8crx:l (2.78) BS01 rna ? GO:0003735 ... Q6A6N3 36864821
    789175 8crx:l (2.78) BS02 rna ? GO:0003735 ... Q6A6N3 36864821
    789176 8crx:m (2.78) BS01 rna N/A GO:0003735 ... A0A8B2VJI7 36864821
    789177 8crx:n (2.78) BS01 rna ? GO:0003735 ... Q6A6P2 36864821
    789178 8crx:n (2.78) BS02 rna ? GO:0003735 ... Q6A6P2 36864821
    789179 8crx:o (2.78) BS01 rna ? GO:0003735 ... Q6A7T1 36864821
    789180 8crx:o (2.78) BS02 rna ? GO:0003735 ... Q6A7T1 36864821
    789181 8crx:p (2.78) BS01 rna ? GO:0000027 ... Q6A7V3 36864821
    789182 8crx:q (2.78) BS01 rna N/A GO:0003723 ... Q6A9I3 36864821
    789183 8crx:r (2.78) BS01 rna ? GO:0003735 ... Q6A6N1 36864821
    789184 8crx:s (2.78) BS01 rna ? GO:0003735 ... Q6A6M8 36864821
    789185 8crx:t (2.78) BS01 rna N/A GO:0003723 ... Q6A6N7 36864821
    789186 8crx:u (2.78) BS01 rna ? GO:0003723 ... Q6AAC8 36864821
    789187 8crx:u (2.78) BS02 rna ? GO:0003723 ... Q6AAC8 36864821
    789188 8crx:v (2.78) BS01 rna ? GO:0003735 ... Q6A9I2 36864821
    789189 8crx:v (2.78) BS02 rna ? GO:0003735 ... Q6A9I2 36864821
    789190 8crx:w (2.78) BS01 rna ? GO:0003735 ... A0A2B7I7B7 36864821
    789191 8crx:w (2.78) BS02 ZN ? GO:0003735 ... A0A2B7I7B7 36864821
    789192 8crx:x (2.78) BS01 rna ? GO:0003735 ... Q6A6N4 36864821
    789193 8crx:y (2.78) BS01 rna ? GO:0003735 ... Q6A6P4 36864821
    789194 8crx:y (2.78) BS02 rna ? GO:0003735 ... Q6A6P4 36864821
    789195 8crx:z (2.78) BS01 rna ? GO:0003735 ... A0A2B7I771 36864821
    789196 8crx:z (2.78) BS02 ZN ? GO:0003735 ... A0A2B7I771 36864821
    789197 8cs0:A (1.65) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 35969672
    789198 8cs0:A (1.65) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 35969672
    789199 8cs9:L (2.74) BS01 CLR ? GO:0005515 ... Q02094 35835865
    789200 8cs9:L (2.74) BS02 CLR ? GO:0005515 ... Q02094 35835865

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).