SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    789001 8dck:F (3.4) BS01 ATP ? GO:0005524 ... Q8FDZ8 36055198
    789002 8dck:F (3.4) BS02 ATP ? GO:0005524 ... Q8FDZ8 36055198
    789003 8dck:F (3.4) BS03 MG ? GO:0005524 ... Q8FDZ8 36055198
    789004 8dck:I (3.4) BS01 ATP ? GO:0005524 ... Q8FDZ8 36055198
    789005 8dck:I (3.4) BS02 MG ? GO:0005524 ... Q8FDZ8 36055198
    789006 8dck:I (3.4) BS03 ATP ? GO:0005524 ... Q8FDZ8 36055198
    789007 8dck:J (3.4) BS01 ATP ? GO:0005524 ... Q8FDZ8 36055198
    789008 8dck:J (3.4) BS02 ATP ? GO:0005524 ... Q8FDZ8 36055198
    789009 8dck:J (3.4) BS03 MG ? GO:0005524 ... Q8FDZ8 36055198
    789010 8dcl:A (1.55) BS01 GDP 5.1.3.13 GO:0000271 ... Q6EF58 36093987
    789011 8dcl:A (1.55) BS02 GDP 5.1.3.13 GO:0000271 ... Q6EF58 36093987
    789012 8dcl:B (1.55) BS01 GDP 5.1.3.13 GO:0000271 ... Q6EF58 36093987
    789013 8dcl:B (1.55) BS02 GDP 5.1.3.13 GO:0000271 ... Q6EF58 36093987
    789014 8dcm:C (2.5) BS01 CA ? GO:0005576 ... A8DS70 36951574
    789015 8dcm:C (2.5) BS02 CA ? GO:0005576 ... A8DS70 36951574
    789016 8dcm:C (2.5) BS03 CA ? GO:0005576 ... A8DS70 36951574
    789017 8dco:A (1.9) BS01 GDP 5.1.3.13 GO:0000271 ... F2X7E5 36093987
    789018 8dco:A (1.9) BS02 GDP 5.1.3.13 GO:0000271 ... F2X7E5 36093987
    789019 8dco:B (1.9) BS01 GDP 5.1.3.13 GO:0000271 ... F2X7E5 36093987
    789020 8dco:B (1.9) BS02 GDP 5.1.3.13 GO:0000271 ... F2X7E5 36093987
    789021 8dcq:A (3.2) BS01 R5K ? GO:0019031 ... A0A0M3KKW9 36511698
    789022 8dcr:R (2.6) BS01 Y00 3.2.1.17 GO:0003796 ... P00720
    P07700
    35835792
    789023 8dcs:R (2.5) BS01 P32 3.2.1.17 GO:0003796 ... P00720
    P07700
    35835792
    789024 8dcz:A (2.38) BS01 4WI 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37637734
    789025 8dcz:B (2.38) BS01 4WI 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37637734
    789026 8dd0:A (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36712934
    789027 8dd0:B (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36712934
    789028 8dd0:C (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36712934
    789029 8dd0:D (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36712934
    789030 8dd0:E (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36712934
    789031 8dd0:F (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36712934
    789032 8dd1:A (2.03) BS01 K36 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37637734
    789033 8dd2:A (2.9) BS01 R5R ? GO:0004888 ... P47870 35933426
    789034 8dd2:A (2.9) BS02 ABU ? GO:0004888 ... P47870 35933426
    789035 8dd2:B (2.9) BS01 R5R ? GO:0004888 ... P14867 35933426
    789036 8dd2:B (2.9) BS02 ABU ? GO:0004888 ... P14867 35933426
    789037 8dd2:C (2.9) BS01 R5R ? GO:0004888 ... P47870 35933426
    789038 8dd2:C (2.9) BS02 ABU ? GO:0004888 ... P47870 35933426
    789039 8dd2:D (2.9) BS01 MAN ? GO:0004888 ... P14867 35933426
    789040 8dd2:D (2.9) BS02 R5R ? GO:0004888 ... P14867 35933426
    789041 8dd2:D (2.9) BS03 R5R ? GO:0004888 ... P14867 35933426
    789042 8dd2:E (2.9) BS01 MAN ? GO:0004888 ... P18507 35933426
    789043 8dd2:E (2.9) BS02 R5R ? GO:0004888 ... P18507 35933426
    789044 8dd3:A (2.9) BS01 ABU ? GO:0004888 ... P47870 35933426
    789045 8dd3:A (2.9) BS02 R63 ? GO:0004888 ... P47870 35933426
    789046 8dd3:B (2.9) BS01 ABU ? GO:0004888 ... P14867 35933426
    789047 8dd3:B (2.9) BS02 R63 ? GO:0004888 ... P14867 35933426
    789048 8dd3:C (2.9) BS01 ABU ? GO:0004888 ... P47870 35933426
    789049 8dd3:C (2.9) BS02 R63 ? GO:0004888 ... P47870 35933426
    789050 8dd3:D (2.9) BS01 MAN ? GO:0004888 ... P14867 35933426
    789051 8dd3:D (2.9) BS02 R63 ? GO:0004888 ... P14867 35933426
    789052 8dd3:D (2.9) BS03 R63 ? GO:0004888 ... P14867 35933426
    789053 8dd3:E (2.9) BS01 MAN ? GO:0004888 ... P18507 35933426
    789054 8dd3:E (2.9) BS02 R63 ? GO:0004888 ... P18507 35933426
    789055 8dd5:A (2.58) BS01 R7L 2.3.1.48 GO:0004402 ... Q92794 N/A
    789056 8dd5:A (2.58) BS02 ZN 2.3.1.48 GO:0004402 ... Q92794 N/A
    789057 8dd6:A (2.3) BS01 K36 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37699927
    789058 8dd7:A (3.3) BS01 FAD ?
    2.1.1.63
    GO:0000166 ... E5BBQ0
    O77059
    37100907
    789059 8dd9:A (2.04) BS01 B1S 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37637734
    789060 8ddb:A (2.15) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    789061 8ddb:A (2.15) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    789062 8ddb:A (2.15) BS03 R6X 3.1.-.- GO:0003723 ... C3W5S0 36655124
    789063 8dde:A (2.22) BS01 R7C 3.1.-.- GO:0003723 ... C3W5S0 36655124
    789064 8dde:A (2.22) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    789065 8dde:A (2.22) BS03 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    789066 8ddm:A (2.78) BS01 K36 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37651467
    789067 8ddq:A (2.7) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789068 8ddq:A (2.7) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789069 8ddq:A (2.7) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789070 8ddq:B (2.7) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789071 8ddq:B (2.7) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789072 8ddq:B (2.7) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789073 8ddq:C (2.7) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789074 8ddq:C (2.7) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789075 8ddq:C (2.7) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789076 8ddq:D (2.7) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789077 8ddq:D (2.7) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789078 8ddq:D (2.7) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789079 8ddr:A (3.2) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789080 8ddr:A (3.2) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789081 8ddr:B (3.2) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789082 8ddr:B (3.2) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789083 8ddr:C (3.2) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789084 8ddr:C (3.2) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789085 8ddr:D (3.2) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789086 8ddr:D (3.2) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789087 8dds:A (3.5) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789088 8dds:A (3.5) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789089 8dds:A (3.5) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    789090 8dds:A (3.5) BS04 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789091 8dds:B (3.5) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789092 8dds:B (3.5) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789093 8dds:B (3.5) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789094 8dds:B (3.5) BS04 PIO ? GO:0005216 ... J9SQF3 36283409
    789095 8dds:C (3.5) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789096 8dds:C (3.5) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789097 8dds:C (3.5) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789098 8dds:C (3.5) BS04 PIO ? GO:0005216 ... J9SQF3 36283409
    789099 8dds:D (3.5) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789100 8dds:D (3.5) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789101 8dds:D (3.5) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789102 8dds:D (3.5) BS04 PIO ? GO:0005216 ... J9SQF3 36283409
    789103 8ddt:A (3.1) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789104 8ddt:A (3.1) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789105 8ddt:A (3.1) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    789106 8ddt:B (3.1) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789107 8ddt:B (3.1) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789108 8ddt:B (3.1) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789109 8ddt:B (3.1) BS04 PIO ? GO:0005216 ... J9SQF3 36283409
    789110 8ddt:C (3.1) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789111 8ddt:C (3.1) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789112 8ddt:C (3.1) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    789113 8ddt:D (3.1) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789114 8ddt:D (3.1) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789115 8ddt:D (3.1) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    789116 8ddu:A (3.0) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789117 8ddu:A (3.0) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789118 8ddu:A (3.0) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    789119 8ddu:B (3.0) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789120 8ddu:B (3.0) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789121 8ddu:B (3.0) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    789122 8ddu:C (3.0) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789123 8ddu:C (3.0) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789124 8ddu:C (3.0) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    789125 8ddu:D (3.0) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789126 8ddu:D (3.0) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789127 8ddu:D (3.0) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    789128 8ddv:A (3.2) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789129 8ddv:A (3.2) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789130 8ddv:A (3.2) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    789131 8ddv:A (3.2) BS04 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789132 8ddv:B (3.2) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789133 8ddv:B (3.2) BS02 PIO ? GO:0005216 ... J9SQF3 36283409
    789134 8ddv:B (3.2) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789135 8ddv:C (3.2) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789136 8ddv:C (3.2) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789137 8ddv:C (3.2) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789138 8ddv:C (3.2) BS04 PIO ? GO:0005216 ... J9SQF3 36283409
    789139 8ddv:D (3.2) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789140 8ddv:D (3.2) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789141 8ddv:D (3.2) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789142 8ddv:D (3.2) BS04 PIO ? GO:0005216 ... J9SQF3 36283409
    789143 8ddw:A (4.7) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789144 8ddw:B (4.7) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789145 8ddw:C (4.7) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789146 8ddw:D (4.7) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789147 8ddx:A (3.8) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789148 8ddx:A (3.8) BS02 PIO ? GO:0005216 ... J9SQF3 36283409
    789149 8ddx:A (3.8) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789150 8ddx:A (3.8) BS04 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789151 8ddx:B (3.8) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789152 8ddx:B (3.8) BS02 PIO ? GO:0005216 ... J9SQF3 36283409
    789153 8ddx:B (3.8) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789154 8ddx:C (3.8) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789155 8ddx:C (3.8) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789156 8ddx:C (3.8) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    789157 8ddx:D (3.8) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    789158 8ddx:D (3.8) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789159 8ddx:D (3.8) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    789160 8ddx:D (3.8) BS04 PIO ? GO:0005216 ... J9SQF3 36283409
    789161 8de0:A (1.72) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    789162 8de0:B (1.72) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    789163 8de0:C (1.72) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    789164 8de0:D (1.72) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    789165 8de1:A (1.56) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    789166 8de1:B (1.56) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    789167 8de1:C (1.56) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    789168 8de1:D (1.56) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    789169 8de2:A (2.45) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    789170 8de2:B (2.45) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    789171 8de2:C (2.45) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    789172 8de2:D (2.45) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    789173 8de3:A (3.3) BS01 COC ? GO:0016020 ... F1RN70 N/A
    789174 8de3:A (3.3) BS02 Y01 ? GO:0016020 ... F1RN70 N/A
    789175 8de3:A (3.3) BS03 Y01 ? GO:0016020 ... F1RN70 N/A
    789176 8de4:A (2.9) BS01 B40 ? GO:0016020 ... F1RN70 N/A
    789177 8de4:A (2.9) BS02 Y01 ? GO:0016020 ... F1RN70 N/A
    789178 8de4:A (2.9) BS03 Y01 ? GO:0016020 ... F1RN70 N/A
    789179 8de5:A (2.02) BS01 NAD 1.2.1.12 GO:0004365 ... Q8X1X3 37709188
    789180 8de5:A (2.02) BS02 J0M 1.2.1.12 GO:0004365 ... Q8X1X3 37709188
    789181 8de6:A (3.2) BS01 BMA ? GO:0005579 ... P02748 36639734
    789182 8de6:A (3.2) BS02 CA ? GO:0005579 ... P02748 36639734
    789183 8de6:C (3.2) BS01 CA ? GO:0005579 ... P02748 36639734
    789184 8de6:G (3.2) BS01 BMA ? GO:0005579 ... P02748 36639734
    789185 8de6:G (3.2) BS02 BMA ? GO:0005579 ... P02748 36639734
    789186 8de6:G (3.2) BS03 CA ? GO:0005579 ... P02748 36639734
    789187 8de7:A (3.27) BS01 K ? GO:0005267 ... F1QAI2 36841877
    789188 8de7:A (3.27) BS02 K ? GO:0005267 ... F1QAI2 36841877
    789189 8de7:A (3.27) BS03 K ? GO:0005267 ... F1QAI2 36841877
    789190 8de7:B (3.27) BS01 K ? GO:0005267 ... F1QAI2 36841877
    789191 8de7:B (3.27) BS02 K ? GO:0005267 ... F1QAI2 36841877
    789192 8de7:B (3.27) BS03 K ? GO:0005267 ... F1QAI2 36841877
    789193 8de8:A (2.82) BS01 D21 ? GO:0005267 ... F1QAI2 36841877
    789194 8de8:A (2.82) BS02 D21 ? GO:0005267 ... F1QAI2 36841877
    789195 8de8:A (2.82) BS03 K ? GO:0005267 ... F1QAI2 36841877
    789196 8de8:A (2.82) BS04 K ? GO:0005267 ... F1QAI2 36841877
    789197 8de8:A (2.82) BS05 K ? GO:0005267 ... F1QAI2 36841877
    789198 8de8:A (2.82) BS06 K ? GO:0005267 ... F1QAI2 36841877
    789199 8de8:B (2.82) BS01 D21 ? GO:0005267 ... F1QAI2 36841877
    789200 8de8:B (2.82) BS02 D21 ? GO:0005267 ... F1QAI2 36841877

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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