SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    789201 8de8:B (2.82) BS03 K ? GO:0005267 ... F1QAI2 36841877
    789202 8de8:B (2.82) BS04 K ? GO:0005267 ... F1QAI2 36841877
    789203 8de8:B (2.82) BS05 K ? GO:0005267 ... F1QAI2 36841877
    789204 8de8:B (2.82) BS06 K ? GO:0005267 ... F1QAI2 36841877
    789205 8de9:A (3.4) BS01 PEV ? GO:0005267 ... F1QAI2 36841877
    789206 8de9:A (3.4) BS02 K ? GO:0005267 ... F1QAI2 36841877
    789207 8de9:A (3.4) BS03 K ? GO:0005267 ... F1QAI2 36841877
    789208 8de9:A (3.4) BS04 K ? GO:0005267 ... F1QAI2 36841877
    789209 8de9:B (3.4) BS01 PEV ? GO:0005267 ... F1QAI2 36841877
    789210 8de9:B (3.4) BS02 K ? GO:0005267 ... F1QAI2 36841877
    789211 8de9:B (3.4) BS03 K ? GO:0005267 ... F1QAI2 36841877
    789212 8de9:B (3.4) BS04 K ? GO:0005267 ... F1QAI2 36841877
    789213 8dea:A (2.214) BS01 R7X 3.4.21.46 GO:0004252 ... P00746 36272185
    789214 8dea:B (2.214) BS01 R7X 3.4.21.46 GO:0004252 ... P00746 36272185
    789215 8dea:C (2.214) BS01 R7X 3.4.21.46 GO:0004252 ... P00746 36272185
    789216 8dea:D (2.214) BS01 R7X 3.4.21.46 GO:0004252 ... P00746 36272185
    789217 8deb:A (1.94) BS01 NAP ? GO:0000166 ... I9VY56 37437886
    789218 8deb:B (1.94) BS01 NAP ? GO:0000166 ... I9VY56 37437886
    789219 8deg:A (2.79) BS01 SIQ 2.7.11.25 GO:0004672 ... Q12852 36469401
    789220 8dej:A (2.86) BS01 rna 3.1.-.- GO:0003723 ... Q72WF9 36805026
    789221 8dej:B (2.86) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789222 8dej:B (2.86) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    789223 8dej:C (2.86) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789224 8dej:C (2.86) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    789225 8dej:D (2.86) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789226 8dej:D (2.86) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    789227 8dej:E (2.86) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789228 8dej:E (2.86) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    789229 8dej:F (2.86) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789230 8dej:F (2.86) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    789231 8dej:G (2.86) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789232 8dej:G (2.86) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    789233 8dej:H (2.86) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789234 8dej:I (2.86) BS01 rna ? N/A Q72WF8 36805026
    789235 8dej:I (2.86) BS02 dna ? N/A Q72WF8 36805026
    789236 8dej:I (2.86) BS03 dna ? N/A Q72WF8 36805026
    789237 8dej:J (2.86) BS01 dna ? N/A Q72WF8 36805026
    789238 8dej:J (2.86) BS02 dna ? N/A Q72WF8 36805026
    789239 8dej:K (2.86) BS01 dna ? N/A Q72WF8 36805026
    789240 8dej:K (2.86) BS02 dna ? N/A Q72WF8 36805026
    789241 8dek:A (2.5) BS01 ZN ? N/A B2UKY7 36049519
    789242 8dek:B (2.5) BS01 ZN ? N/A B2UKY7 36049519
    789243 8del:A (2.56) BS01 ZN N/A GO:0005506 ... N/A 36106943
    789244 8del:B (2.56) BS01 ZN N/A GO:0005506 ... N/A 36106943
    789245 8del:C (2.56) BS01 ZN N/A GO:0005506 ... N/A 36106943
    789246 8deo:A (2.3) BS01 CA ? N/A Q5HKE8 36702253
    789247 8deo:B (2.3) BS01 CA ? N/A Q5HKE8 36702253
    789248 8dep:A (3.6) BS01 AJP ? GO:0005506 ... P0ABE7
    P41440
    36071163
    789249 8der:L (3.3) BS01 BMA N/A N/A N/A 37295404
    789250 8des:A (2.6) BS01 peptide ? GO:0005198 ... A0A6G9L6B3 36255280
    789251 8deu:B (2.95) BS01 peptide ? GO:0005886 ... Q5F725 36121287
    789252 8dev:B (3.08) BS01 peptide ? GO:0005886 ... Q5F725 36121287
    789253 8dew:B (2.89) BS01 peptide ? GO:0005886 ... Q5F725 36121287
    789254 8dex:A (2.7) BS01 rna 3.1.-.- GO:0003723 ... Q72WF9 36805026
    789255 8dex:B (2.7) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789256 8dex:C (2.7) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789257 8dex:D (2.7) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789258 8dex:E (2.7) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789259 8dex:F (2.7) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789260 8dex:G (2.7) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789261 8dex:H (2.7) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789262 8dex:I (2.7) BS01 rna ? N/A Q72WF8 36805026
    789263 8dey:A (3.7) BS01 ZN ? N/A Q96SW2 36863346
    789264 8dey:A (3.7) BS02 LWK ? N/A Q96SW2 36863346
    789265 8dey:C (3.7) BS01 LWK ? N/A Q9UKS7 36863346
    789266 8dey:C (3.7) BS02 ZN ? N/A Q9UKS7 36863346
    789267 8dey:C (3.7) BS03 ZN ? N/A Q9UKS7 36863346
    789268 8dey:D (3.7) BS01 ZN ? N/A Q96SW2 36863346
    789269 8dey:F (3.7) BS01 ZN ? N/A Q9UKS7 36863346
    789270 8dey:F (3.7) BS02 ZN ? N/A Q9UKS7 36863346
    789271 8df2:A (2.35) BS01 ZN ? N/A B2UKY7 36049519
    789272 8df2:A (2.35) BS02 CA ? N/A B2UKY7 36049519
    789273 8df2:B (2.35) BS01 ZN ? N/A B2UKY7 36049519
    789274 8df2:B (2.35) BS02 CA ? N/A B2UKY7 36049519
    789275 8df2:C (2.35) BS01 ZN ? N/A B2UKY7 36049519
    789276 8df2:C (2.35) BS02 CA ? N/A B2UKY7 36049519
    789277 8df2:D (2.35) BS01 ZN ? N/A B2UKY7 36049519
    789278 8df2:D (2.35) BS02 CA ? N/A B2UKY7 36049519
    789279 8df5:E (2.7) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 35762884
    789280 8df5:F (2.7) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 35762884
    789281 8df7:A (3.52) BS01 dna ? GO:0003677 ... Q977W1 35969036
    789282 8df7:A (3.52) BS02 dna ? GO:0003677 ... Q977W1 35969036
    789283 8df7:B (3.52) BS01 dna ? GO:0003677 ... Q977W1 35969036
    789284 8df7:B (3.52) BS02 dna ? GO:0003677 ... Q977W1 35969036
    789285 8df8:A (2.92) BS01 dna ? GO:0003677 ... Q977W1 35969036
    789286 8df8:A (2.92) BS02 dna ? GO:0003677 ... Q977W1 35969036
    789287 8df8:A (2.92) BS03 PO3 ? GO:0003677 ... Q977W1 35969036
    789288 8df8:B (2.92) BS01 dna ? GO:0003677 ... Q977W1 35969036
    789289 8df8:B (2.92) BS02 dna ? GO:0003677 ... Q977W1 35969036
    789290 8df9:A (3.24) BS01 dna ? GO:0003677 ... Q977W1 35969036
    789291 8df9:A (3.24) BS02 dna ? GO:0003677 ... Q977W1 35969036
    789292 8df9:A (3.24) BS03 MG ? GO:0003677 ... Q977W1 35969036
    789293 8df9:A (3.24) BS04 MG ? GO:0003677 ... Q977W1 35969036
    789294 8df9:B (3.24) BS01 dna ? GO:0003677 ... Q977W1 35969036
    789295 8df9:B (3.24) BS02 dna ? GO:0003677 ... Q977W1 35969036
    789296 8df9:B (3.24) BS03 dna ? GO:0003677 ... Q977W1 35969036
    789297 8df9:B (3.24) BS04 dna ? GO:0003677 ... Q977W1 35969036
    789298 8df9:B (3.24) BS05 MG ? GO:0003677 ... Q977W1 35969036
    789299 8df9:B (3.24) BS06 MG ? GO:0003677 ... Q977W1 35969036
    789300 8df9:B (3.24) BS07 MG ? GO:0003677 ... Q977W1 35969036
    789301 8dfa:A (2.8) BS01 rna 3.1.-.- GO:0003723 ... Q72WF9 36805026
    789302 8dfa:B (2.8) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789303 8dfa:B (2.8) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    789304 8dfa:C (2.8) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789305 8dfa:C (2.8) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    789306 8dfa:D (2.8) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789307 8dfa:D (2.8) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    789308 8dfa:E (2.8) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789309 8dfa:E (2.8) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    789310 8dfa:F (2.8) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789311 8dfa:G (2.8) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789312 8dfa:H (2.8) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789313 8dfa:I (2.8) BS01 rna ? N/A Q72WF8 36805026
    789314 8dfa:I (2.8) BS02 dna ? N/A Q72WF8 36805026
    789315 8dfa:J (2.8) BS01 dna ? N/A Q72WF8 36805026
    789316 8dfb:A (3.17) BS01 dna ? GO:0003677 ... Q977W1 35969036
    789317 8dfb:A (3.17) BS02 dna ? GO:0003677 ... Q977W1 35969036
    789318 8dfb:B (3.17) BS01 dna ? GO:0003677 ... Q977W1 35969036
    789319 8dfb:B (3.17) BS02 dna ? GO:0003677 ... Q977W1 35969036
    789320 8dfc:A (2.48) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 38575747
    789321 8dfc:A (2.48) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 38575747
    789322 8dfc:B (2.48) BS01 CLF 1.18.6.1 GO:0005524 ... P07329 38575747
    789323 8dfc:B (2.48) BS02 FE 1.18.6.1 GO:0005524 ... P07329 38575747
    789324 8dfc:B (2.48) BS03 FE 1.18.6.1 GO:0005524 ... P07329 38575747
    789325 8dfc:C (2.48) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 38575747
    789326 8dfc:C (2.48) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 38575747
    789327 8dfc:D (2.48) BS01 FE 1.18.6.1 GO:0005524 ... P07329 38575747
    789328 8dfc:D (2.48) BS02 CLF 1.18.6.1 GO:0005524 ... P07329 38575747
    789329 8dfc:D (2.48) BS03 FE 1.18.6.1 GO:0005524 ... P07329 38575747
    789330 8dfc:E (2.48) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 38575747
    789331 8dfc:E (2.48) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    789332 8dfc:E (2.48) BS03 ALF 1.18.6.1 GO:0005524 ... P00459 38575747
    789333 8dfc:E (2.48) BS04 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    789334 8dfc:F (2.48) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 38575747
    789335 8dfc:F (2.48) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    789336 8dfc:F (2.48) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    789337 8dfc:F (2.48) BS04 ALF 1.18.6.1 GO:0005524 ... P00459 38575747
    789338 8dfd:A (2.12) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 38575747
    789339 8dfd:A (2.12) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 38575747
    789340 8dfd:B (2.12) BS01 CLF 1.18.6.1 GO:0005524 ... P07329 38575747
    789341 8dfd:B (2.12) BS02 FE 1.18.6.1 GO:0005524 ... P07329 38575747
    789342 8dfd:B (2.12) BS03 FE 1.18.6.1 GO:0005524 ... P07329 38575747
    789343 8dfd:C (2.12) BS01 ICS 1.18.6.1 GO:0005524 ... P07328 38575747
    789344 8dfd:C (2.12) BS02 CLF 1.18.6.1 GO:0005524 ... P07328 38575747
    789345 8dfd:D (2.12) BS01 FE 1.18.6.1 GO:0005524 ... P07329 38575747
    789346 8dfd:D (2.12) BS02 CLF 1.18.6.1 GO:0005524 ... P07329 38575747
    789347 8dfd:D (2.12) BS03 FE 1.18.6.1 GO:0005524 ... P07329 38575747
    789348 8dfd:E (2.12) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 38575747
    789349 8dfd:E (2.12) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    789350 8dfd:E (2.12) BS03 ALF 1.18.6.1 GO:0005524 ... P00459 38575747
    789351 8dfd:E (2.12) BS04 MG 1.18.6.1 GO:0005524 ... P00459 38575747
    789352 8dfd:E (2.12) BS05 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    789353 8dfd:F (2.12) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 38575747
    789354 8dfd:F (2.12) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    789355 8dfd:F (2.12) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    789356 8dfd:F (2.12) BS04 ALF 1.18.6.1 GO:0005524 ... P00459 38575747
    789357 8dfd:F (2.12) BS05 MG 1.18.6.1 GO:0005524 ... P00459 38575747
    789358 8dfd:G (2.12) BS01 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    789359 8dfd:G (2.12) BS02 ALF 1.18.6.1 GO:0005524 ... P00459 38575747
    789360 8dfd:G (2.12) BS03 SF4 1.18.6.1 GO:0005524 ... P00459 38575747
    789361 8dfd:G (2.12) BS04 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    789362 8dfd:H (2.12) BS01 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    789363 8dfd:H (2.12) BS02 SF4 1.18.6.1 GO:0005524 ... P00459 38575747
    789364 8dfd:H (2.12) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    789365 8dfd:H (2.12) BS04 ALF 1.18.6.1 GO:0005524 ... P00459 38575747
    789366 8dfo:A (3.1) BS01 rna 3.1.-.- GO:0003723 ... Q72WF9 36805026
    789367 8dfo:B (3.1) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789368 8dfo:C (3.1) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789369 8dfo:D (3.1) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789370 8dfo:E (3.1) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789371 8dfo:F (3.1) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789372 8dfo:G (3.1) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789373 8dfo:H (3.1) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789374 8dfo:I (3.1) BS01 rna ? N/A Q72WF8 36805026
    789375 8dfr:A (1.7) BS01 NDP 1.5.1.3 GO:0003723 ... P00378 N/A
    789376 8dfs:A (3.0) BS01 rna 3.1.-.- GO:0003723 ... Q72WF9 36805026
    789377 8dfs:B (3.0) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789378 8dfs:C (3.0) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789379 8dfs:D (3.0) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789380 8dfs:E (3.0) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789381 8dfs:F (3.0) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789382 8dfs:G (3.0) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789383 8dfs:H (3.0) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    789384 8dfs:I (3.0) BS01 rna ? N/A Q72WF8 36805026
    789385 8dft:A (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789386 8dft:A (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789387 8dft:A (4.1) BS03 TT0 ? N/A A3MU74 36750723
    789388 8dft:A (4.1) BS04 TT0 ? N/A A3MU74 36750723
    789389 8dft:B (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789390 8dft:B (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789391 8dft:C (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789392 8dft:C (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789393 8dft:D (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789394 8dft:D (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789395 8dft:E (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789396 8dft:E (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789397 8dft:F (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789398 8dft:F (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789399 8dft:F (4.1) BS03 TT0 ? N/A A3MU74 36750723
    789400 8dft:G (4.1) BS01 TT0 ? N/A A3MU74 36750723

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).