SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    789401 8dft:G (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789402 8dft:G (4.1) BS03 TT0 ? N/A A3MU74 36750723
    789403 8dft:G (4.1) BS04 TT0 ? N/A A3MU74 36750723
    789404 8dft:H (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789405 8dft:H (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789406 8dft:H (4.1) BS03 TT0 ? N/A A3MU74 36750723
    789407 8dft:H (4.1) BS04 TT0 ? N/A A3MU74 36750723
    789408 8dft:I (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789409 8dft:I (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789410 8dft:I (4.1) BS03 TT0 ? N/A A3MU74 36750723
    789411 8dft:I (4.1) BS04 TT0 ? N/A A3MU74 36750723
    789412 8dft:J (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789413 8dft:J (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789414 8dft:J (4.1) BS03 TT0 ? N/A A3MU74 36750723
    789415 8dft:J (4.1) BS04 TT0 ? N/A A3MU74 36750723
    789416 8dft:K (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789417 8dft:K (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789418 8dft:K (4.1) BS03 TT0 ? N/A A3MU74 36750723
    789419 8dft:K (4.1) BS04 TT0 ? N/A A3MU74 36750723
    789420 8dft:L (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789421 8dft:L (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789422 8dft:L (4.1) BS03 TT0 ? N/A A3MU74 36750723
    789423 8dft:L (4.1) BS04 TT0 ? N/A A3MU74 36750723
    789424 8dft:M (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789425 8dft:M (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789426 8dft:M (4.1) BS03 TT0 ? N/A A3MU74 36750723
    789427 8dft:M (4.1) BS04 TT0 ? N/A A3MU74 36750723
    789428 8dft:N (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789429 8dft:N (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789430 8dft:N (4.1) BS03 TT0 ? N/A A3MU74 36750723
    789431 8dft:N (4.1) BS04 TT0 ? N/A A3MU74 36750723
    789432 8dft:O (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789433 8dft:O (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789434 8dft:O (4.1) BS03 TT0 ? N/A A3MU74 36750723
    789435 8dft:O (4.1) BS04 TT0 ? N/A A3MU74 36750723
    789436 8dft:P (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789437 8dft:P (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789438 8dft:P (4.1) BS03 TT0 ? N/A A3MU74 36750723
    789439 8dft:P (4.1) BS04 TT0 ? N/A A3MU74 36750723
    789440 8dft:Q (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789441 8dft:Q (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789442 8dft:Q (4.1) BS03 TT0 ? N/A A3MU74 36750723
    789443 8dft:Q (4.1) BS04 TT0 ? N/A A3MU74 36750723
    789444 8dft:R (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789445 8dft:R (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789446 8dft:R (4.1) BS03 TT0 ? N/A A3MU74 36750723
    789447 8dft:R (4.1) BS04 TT0 ? N/A A3MU74 36750723
    789448 8dft:S (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789449 8dft:S (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789450 8dft:S (4.1) BS03 TT0 ? N/A A3MU74 36750723
    789451 8dft:S (4.1) BS04 TT0 ? N/A A3MU74 36750723
    789452 8dft:T (4.1) BS01 TT0 ? N/A A3MU74 36750723
    789453 8dft:T (4.1) BS02 TT0 ? N/A A3MU74 36750723
    789454 8dft:T (4.1) BS03 TT0 ? N/A A3MU74 36750723
    789455 8dfu:0 (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789456 8dfu:1 (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789457 8dfu:2 (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789458 8dfu:3 (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789459 8dfu:A (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789460 8dfu:A (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789461 8dfu:B (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789462 8dfu:B (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789463 8dfu:B (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789464 8dfu:C (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789465 8dfu:C (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789466 8dfu:D (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789467 8dfu:D (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789468 8dfu:E (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789469 8dfu:E (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789470 8dfu:F (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789471 8dfu:F (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789472 8dfu:G (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789473 8dfu:G (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789474 8dfu:G (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789475 8dfu:H (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789476 8dfu:H (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789477 8dfu:H (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789478 8dfu:I (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789479 8dfu:I (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789480 8dfu:I (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789481 8dfu:J (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789482 8dfu:J (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789483 8dfu:J (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789484 8dfu:K (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789485 8dfu:K (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789486 8dfu:K (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789487 8dfu:L (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789488 8dfu:L (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789489 8dfu:L (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789490 8dfu:M (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789491 8dfu:M (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789492 8dfu:M (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789493 8dfu:N (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789494 8dfu:N (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789495 8dfu:N (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789496 8dfu:O (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789497 8dfu:O (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789498 8dfu:O (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789499 8dfu:P (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789500 8dfu:P (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789501 8dfu:Q (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789502 8dfu:Q (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789503 8dfu:Q (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789504 8dfu:R (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789505 8dfu:R (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789506 8dfu:R (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789507 8dfu:S (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789508 8dfu:S (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789509 8dfu:S (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789510 8dfu:T (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789511 8dfu:T (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789512 8dfu:T (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789513 8dfu:U (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789514 8dfu:U (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789515 8dfu:U (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789516 8dfu:V (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789517 8dfu:V (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789518 8dfu:V (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789519 8dfu:W (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789520 8dfu:W (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789521 8dfu:W (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789522 8dfu:X (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789523 8dfu:X (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789524 8dfu:X (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789525 8dfu:Y (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789526 8dfu:Y (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789527 8dfu:Y (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789528 8dfu:Z (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789529 8dfu:Z (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    789530 8dfv:A (3.06) BS01 rna 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789531 8dfv:A (3.06) BS02 CA 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789532 8dfv:A (3.06) BS03 CA 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789533 8dfv:A (3.06) BS04 CA 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789534 8dfv:A (3.06) BS05 CA 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789535 8dfv:K (3.06) BS01 rna ? GO:0003723 ... Q9VJY9 36182693
    789536 8dg1:B (1.95) BS01 CU ? GO:0003756 ... P0AEG4 36760747
    789537 8dg2:B (1.95) BS01 CU ? GO:0003756 ... P0AEG4 36760747
    789538 8dg5:A (3.26) BS01 rna 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789539 8dg5:A (3.26) BS02 MG 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789540 8dg5:A (3.26) BS03 U5P 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789541 8dg5:A (3.26) BS04 MG 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789542 8dg5:K (3.26) BS01 rna ? GO:0003723 ... Q9VJY9 36182693
    789543 8dg6:A (1.986) BS01 S7X 3.4.21.46 GO:0004252 ... P00746 36272185
    789544 8dg7:A (3.32) BS01 rna 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789545 8dg7:A (3.32) BS02 rna 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789546 8dg7:A (3.32) BS03 MG 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789547 8dg7:A (3.32) BS04 MG 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789548 8dg7:A (3.32) BS05 U5P 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789549 8dg7:K (3.32) BS01 rna ? GO:0003723 ... Q9VJY9 36182693
    789550 8dg7:K (3.32) BS02 rna ? GO:0003723 ... Q9VJY9 36182693
    789551 8dga:A (3.73) BS01 rna 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789552 8dga:A (3.73) BS02 rna 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789553 8dga:A (3.73) BS03 U5P 3.1.26.3 GO:0003676 ... Q9VCU9 36182693
    789554 8dga:K (3.73) BS01 rna ? GO:0003723 ... Q9VJY9 36182693
    789555 8dga:K (3.73) BS02 rna ? GO:0003723 ... Q9VJY9 36182693
    789556 8dgb:A (2.87) BS01 B1S 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37637734
    789557 8dgb:B (2.87) BS01 B1S 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37637734
    789558 8dgc:A (3.4) BS01 ATP N/A N/A N/A 35951700
    789559 8dgc:B (3.4) BS01 ATP N/A N/A N/A 35951700
    789560 8dgc:C (3.4) BS01 ATP N/A N/A N/A 35951700
    789561 8dgc:D (3.4) BS01 ATP N/A N/A N/A 35951700
    789562 8dgc:E (3.4) BS01 ATP 3.1.21.-
    3.6.4.-
    GO:0004519 ... A0A7G3WWS0 35951700
    789563 8dgc:F (3.4) BS01 ATP 3.1.21.-
    3.6.4.-
    GO:0004519 ... A0A7G3WWS0 35951700
    789564 8dgc:G (3.4) BS01 ATP 3.1.21.-
    3.6.4.-
    GO:0004519 ... A0A7G3WWS0 35951700
    789565 8dgc:H (3.4) BS01 ATP 3.1.21.-
    3.6.4.-
    GO:0004519 ... A0A7G3WWS0 35951700
    789566 8dgd:A (1.9) BS01 ZN ? GO:0005829 ... A0A0H3GUR8 N/A
    789567 8dge:A (1.89) BS01 CA N/A GO:0005975 ... N/A 37500984
    789568 8dge:A (1.89) BS02 MN N/A GO:0005975 ... N/A 37500984
    789569 8dge:B (1.89) BS01 CA N/A GO:0005975 ... N/A 37500984
    789570 8dge:B (1.89) BS02 MN N/A GO:0005975 ... N/A 37500984
    789571 8dge:C (1.89) BS01 CA N/A GO:0005975 ... N/A 37500984
    789572 8dge:C (1.89) BS02 MN N/A GO:0005975 ... N/A 37500984
    789573 8dge:D (1.89) BS01 CA N/A GO:0005975 ... N/A 37500984
    789574 8dge:D (1.89) BS02 MN N/A GO:0005975 ... N/A 37500984
    789575 8dgf:A (2.9) BS01 ATP N/A GO:0016887 ... N/A 35951700
    789576 8dgf:B (2.9) BS01 ATP N/A GO:0016887 ... N/A 35951700
    789577 8dgf:C (2.9) BS01 ATP N/A GO:0016887 ... N/A 35951700
    789578 8dgf:D (2.9) BS01 ATP N/A GO:0016887 ... N/A 35951700
    789579 8dgh:A (-1.00) BS01 peptide ? GO:0000086 ... P0DP23 36070238
    789580 8dgk:A (-1.00) BS01 peptide ? GO:0000086 ... P0DP23 36070238
    789581 8dgm:A (3.2) BS01 peptide ? GO:0000165 ... P62258 37336884
    789582 8dgn:A (3.16) BS01 peptide ? GO:0000165 ... P62258 37336884
    789583 8dgo:B (2.3) BS01 peptide ? GO:0001784 ... P62993 37336884
    789584 8dgp:A (2.7) BS01 peptide ? GO:0000165 ... P62258 37336884
    789585 8dgp:B (2.7) BS01 peptide ? GO:0000165 ... P62258 37336884
    789586 8dgp:C (2.7) BS01 peptide ? GO:0000165 ... P62258 37336884
    789587 8dgp:D (2.7) BS01 peptide ? GO:0000165 ... P62258 37336884
    789588 8dgq:A (1.95) BS01 peptide ? N/A P20936 36417908
    789589 8dgq:B (1.95) BS01 peptide ? N/A P20936 36417908
    789590 8dgs:A (4.3) BS01 AGS 2.7.11.1 GO:0000165 ... P15056 37516774
    789591 8dgs:A (4.3) BS02 ZN 2.7.11.1 GO:0000165 ... P15056 37516774
    789592 8dgs:A (4.3) BS03 ZN 2.7.11.1 GO:0000165 ... P15056 37516774
    789593 8dgs:B (4.3) BS01 AGS 2.7.12.2 GO:0000165 ... Q02750 37516774
    789594 8dgs:B (4.3) BS02 LCJ 2.7.12.2 GO:0000165 ... Q02750 37516774
    789595 8dgs:E (4.3) BS01 MG 3.6.5.2 GO:0003924 ... P01116 37516774
    789596 8dgs:E (4.3) BS02 GNP 3.6.5.2 GO:0003924 ... P01116 37516774
    789597 8dgt:A (3.9) BS01 AGS 2.7.11.1 GO:0000165 ... P15056 37516774
    789598 8dgt:A (3.9) BS02 ZN 2.7.11.1 GO:0000165 ... P15056 37516774
    789599 8dgt:A (3.9) BS03 ZN 2.7.11.1 GO:0000165 ... P15056 37516774
    789600 8dgt:B (3.9) BS01 MG 2.7.12.2 GO:0000165 ... Q02750 37516774

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).