SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    789801 8dj2:A (1.5) BS01 CA N/A N/A N/A N/A
    789802 8dj2:B (1.5) BS01 CA N/A N/A N/A N/A
    789803 8dj2:B (1.5) BS02 CA N/A N/A N/A N/A
    789804 8dj3:A (3.2) BS01 SE1 3.4.22.60 GO:0001650 ... P55210 37005499
    789805 8dj6:A (2.5) BS01 peptide ? GO:0003677 ... G7CIP4 N/A
    789806 8dj6:B (2.5) BS01 peptide ? GO:0003677 ... G7CIP4 N/A
    789807 8dj6:C (2.5) BS01 peptide ? GO:0003677 ... G7CIP4 N/A
    789808 8dj6:D (2.5) BS01 peptide ? GO:0003677 ... G7CIP4 N/A
    789809 8dj7:A (2.39) BS01 GAL ? N/A P01857 36814926
    789810 8dj7:B (2.39) BS01 BMA ? N/A P01857 36814926
    789811 8dj9:A (1.54) BS01 IZP 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 36322425
    789812 8dj9:A (1.54) BS02 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 36322425
    789813 8djc:A (2.463) BS01 UAU 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 36950863
    789814 8djc:B (2.463) BS01 UAU 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 36950863
    789815 8djd:A (2.205) BS01 U3E 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 36669575
    789816 8djd:B (2.205) BS01 U3E 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 36669575
    789817 8dje:A (2.374) BS01 U6S 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 36950863
    789818 8dje:B (2.374) BS01 U6S 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 36950863
    789819 8djf:A (1.55) BS01 CA 3.1.1.17 GO:0004341 ... Q6N3R9 36502920
    789820 8djf:A (1.55) BS02 SGU 3.1.1.17 GO:0004341 ... Q6N3R9 36502920
    789821 8djh:A (1.77) BS01 peptide ? GO:0001741 ... P63165 35871297
    789822 8djh:A (1.77) BS02 ZN ? GO:0001741 ... P63165 35871297
    789823 8djh:A (1.77) BS03 ZN ? GO:0001741 ... P63165 35871297
    789824 8djh:A (1.77) BS04 ZN ? GO:0001741 ... P63165 35871297
    789825 8dji:A (1.97) BS01 peptide ? GO:0001741 ... P63165 35871297
    789826 8dji:A (1.97) BS02 ZN ? GO:0001741 ... P63165 35871297
    789827 8dji:A (1.97) BS03 ZN ? GO:0001741 ... P63165 35871297
    789828 8djk:A (3.33) BS01 Y01 1.1.1.34 GO:0000139 ... P00347 35879350
    789829 8djk:A (3.33) BS02 Y01 1.1.1.34 GO:0000139 ... P00347 35879350
    789830 8djk:A (3.33) BS03 Y01 1.1.1.34 GO:0000139 ... P00347 35879350
    789831 8djk:A (3.33) BS04 Y01 1.1.1.34 GO:0000139 ... P00347 35879350
    789832 8djk:A (3.33) BS05 Y01 1.1.1.34 GO:0000139 ... P00347 35879350
    789833 8djk:A (3.33) BS06 AJP 1.1.1.34 GO:0000139 ... P00347 35879350
    789834 8djk:B (3.33) BS01 AJP 2.5.1.39 GO:0004659 ... G3IEF0 35879350
    789835 8djk:B (3.33) BS02 AJP 2.5.1.39 GO:0004659 ... G3IEF0 35879350
    789836 8djk:B (3.33) BS03 Y01 2.5.1.39 GO:0004659 ... G3IEF0 35879350
    789837 8djm:A (3.23) BS01 Y01 1.1.1.34 GO:0000139 ... P00347 35879350
    789838 8djm:A (3.23) BS02 Y01 1.1.1.34 GO:0000139 ... P00347 35879350
    789839 8djm:A (3.23) BS03 Y01 1.1.1.34 GO:0000139 ... P00347 35879350
    789840 8djm:A (3.23) BS04 AJP 1.1.1.34 GO:0000139 ... P00347 35879350
    789841 8djm:B (3.23) BS01 AJP 2.5.1.39 GO:0004659 ... G3IEF0 35879350
    789842 8djm:B (3.23) BS02 AJP 2.5.1.39 GO:0004659 ... G3IEF0 35879350
    789843 8djm:B (3.23) BS03 Y01 2.5.1.39 GO:0004659 ... G3IEF0 35879350
    789844 8djq:A (2.8) BS01 peptide ? GO:0003677 ... G7CIP4 N/A
    789845 8djq:B (2.8) BS01 peptide ? GO:0003677 ... G7CIP4 N/A
    789846 8djq:C (2.8) BS01 peptide ? GO:0003677 ... G7CIP4 N/A
    789847 8djq:D (2.8) BS01 peptide ? GO:0003677 ... G7CIP4 N/A
    789848 8djr:A (1.46) BS01 HEM 1.11.1.11 GO:0000302 ... C5WNL8 36575825
    789849 8djs:A (1.19) BS01 HEM 1.11.1.11 GO:0000302 ... C5WNL8 36575825
    789850 8djs:A (1.19) BS02 ASC 1.11.1.11 GO:0000302 ... C5WNL8 36575825
    789851 8djt:A (1.16) BS01 HEM 1.11.1.11 GO:0000302 ... C5WNL8 36575825
    789852 8djt:A (1.16) BS02 ASC 1.11.1.11 GO:0000302 ... C5WNL8 36575825
    789853 8djt:A (1.16) BS03 ASC 1.11.1.11 GO:0000302 ... C5WNL8 36575825
    789854 8djt:A (1.16) BS04 ASC 1.11.1.11 GO:0000302 ... C5WNL8 36575825
    789855 8djt:A (1.16) BS05 ASC 1.11.1.11 GO:0000302 ... C5WNL8 36575825
    789856 8dju:A (1.5) BS01 HEM 1.11.1.11 GO:0000302 ... C5WNL8 36575825
    789857 8dju:A (1.5) BS02 SIV 1.11.1.11 GO:0000302 ... C5WNL8 36575825
    789858 8djv:A (2.08) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    789859 8djv:A (2.08) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    789860 8djv:A (2.08) BS03 U3U 3.1.-.- GO:0003723 ... C3W5S0 36655124
    789861 8djw:A (1.8) BS01 HEM 1.11.1.11 GO:0000302 ... C5WNL8 36575825
    789862 8djw:A (1.8) BS02 OXY 1.11.1.11 GO:0000302 ... C5WNL8 36575825
    789863 8djx:A (1.34) BS01 HEM 1.11.1.11 GO:0000302 ... C5WNL8 36575825
    789864 8djy:A (2.5) BS01 U3L 3.1.-.- GO:0003723 ... C3W5S0 36655124
    789865 8djy:A (2.5) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    789866 8djy:A (2.5) BS03 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    789867 8djz:A (1.55) BS01 CA 3.1.1.17 GO:0004341 ... Q6N3R9 36502920
    789868 8djz:A (1.55) BS02 SJ3 3.1.1.17 GO:0004341 ... Q6N3R9 36502920
    789869 8dk0:A (1.55) BS01 CA 3.1.1.17 GO:0004341 ... Q6N3R9 36502920
    789870 8dk0:A (1.55) BS02 YVR 3.1.1.17 GO:0004341 ... Q6N3R9 36502920
    789871 8dk2:C (4.1) BS01 dna N/A N/A N/A 36206765
    789872 8dk2:C (4.1) BS02 AGS N/A N/A N/A 36206765
    789873 8dk2:C (4.1) BS03 MG N/A N/A N/A 36206765
    789874 8dk2:C (4.1) BS04 AGS N/A N/A N/A 36206765
    789875 8dk2:D (4.1) BS01 dna N/A N/A N/A 36206765
    789876 8dk2:D (4.1) BS02 AGS N/A N/A N/A 36206765
    789877 8dk2:D (4.1) BS03 MG N/A N/A N/A 36206765
    789878 8dk3:A (3.28) BS01 AGS N/A N/A N/A 36206765
    789879 8dk3:A (3.28) BS02 AGS N/A N/A N/A 36206765
    789880 8dk3:B (3.28) BS01 AGS N/A N/A N/A 36206765
    789881 8dk3:B (3.28) BS02 AGS N/A N/A N/A 36206765
    789882 8dk4:A (2.6) BS01 peptide ? GO:0003677 ... P37231 N/A
    789883 8dk4:A (2.6) BS02 SJ9 ? GO:0003677 ... P37231 N/A
    789884 8dk5:A (2.71) BS01 dna ? GO:0000786 ... P68431 37327775
    789885 8dk5:A (2.71) BS02 dna ? GO:0000786 ... P68431 37327775
    789886 8dk5:B (2.71) BS01 dna ? GO:0000781 ... P62805 37327775
    789887 8dk5:B (2.71) BS02 dna ? GO:0000781 ... P62805 37327775
    789888 8dk5:C (2.71) BS01 dna ? GO:0000786 ... Q16777 37327775
    789889 8dk5:C (2.71) BS02 dna ? GO:0000786 ... Q16777 37327775
    789890 8dk5:D (2.71) BS01 dna ? GO:0000786 ... Q16778 37327775
    789891 8dk5:D (2.71) BS02 dna ? GO:0000786 ... Q16778 37327775
    789892 8dk5:E (2.71) BS01 dna ? GO:0000786 ... P68431 37327775
    789893 8dk5:E (2.71) BS02 dna ? GO:0000786 ... P68431 37327775
    789894 8dk5:F (2.71) BS01 dna ? GO:0000781 ... P62805 37327775
    789895 8dk5:F (2.71) BS02 dna ? GO:0000781 ... P62805 37327775
    789896 8dk5:G (2.71) BS01 dna ? GO:0000786 ... Q16777 37327775
    789897 8dk5:G (2.71) BS02 dna ? GO:0000786 ... Q16777 37327775
    789898 8dk5:H (2.71) BS01 dna ? GO:0000786 ... Q16778 37327775
    789899 8dk5:H (2.71) BS02 dna ? GO:0000786 ... Q16778 37327775
    789900 8dk7:A (2.46) BS01 rna N/A N/A N/A 36413497
    789901 8dk7:B (2.46) BS01 rna N/A N/A N/A 36413497
    789902 8dk7:D (2.46) BS01 rna N/A N/A N/A 36413497
    789903 8dk7:E (2.46) BS01 rna N/A N/A N/A 36413497
    789904 8dk9:A (2.5) BS01 peptide ? GO:0003677 ... G7CIP4 N/A
    789905 8dk9:B (2.5) BS01 peptide ? GO:0003677 ... G7CIP4 N/A
    789906 8dk9:C (2.5) BS01 peptide ? GO:0003677 ... G7CIP4 N/A
    789907 8dk9:D (2.5) BS01 peptide ? GO:0003677 ... G7CIP4 N/A
    789908 8dkb:A (2.58) BS01 SJI ? GO:0006355 ... O95619 36562986
    789909 8dkb:B (2.58) BS01 SJI ? GO:0006355 ... O95619 36562986
    789910 8dkb:C (2.58) BS01 SJI ? GO:0006355 ... O95619 36562986
    789911 8dkb:C (2.58) BS02 SJI ? GO:0006355 ... O95619 36562986
    789912 8dkb:D (2.58) BS01 SJI ? GO:0006355 ... O95619 36562986
    789913 8dkb:D (2.58) BS02 SJI ? GO:0006355 ... O95619 36562986
    789914 8dkb:E (2.58) BS01 SJI ? GO:0006355 ... O95619 36562986
    789915 8dkb:F (2.58) BS01 SJI ? GO:0006355 ... O95619 36562986
    789916 8dkb:F (2.58) BS02 SJI ? GO:0006355 ... O95619 36562986
    789917 8dkb:G (2.58) BS01 SJI ? GO:0006355 ... O95619 36562986
    789918 8dkb:G (2.58) BS02 SJI ? GO:0006355 ... O95619 36562986
    789919 8dkb:H (2.58) BS01 SJI ? GO:0006355 ... O95619 36562986
    789920 8dkg:A (1.85) BS01 NAI 1.5.1.2 GO:0004735 ... P32322 36713721
    789921 8dkg:B (1.85) BS01 NAI 1.5.1.2 GO:0004735 ... P32322 36713721
    789922 8dkg:C (1.85) BS01 NAI 1.5.1.2 GO:0004735 ... P32322 36713721
    789923 8dkg:D (1.85) BS01 NAI 1.5.1.2 GO:0004735 ... P32322 36713721
    789924 8dkg:E (1.85) BS01 NAI 1.5.1.2 GO:0004735 ... P32322 36713721
    789925 8dkm:P (3.39) BS01 IYY ? N/A O60931 36113465
    789926 8dkn:A (1.95) BS01 peptide ? GO:0003677 ... P37231 36179791
    789927 8dkn:A (1.95) BS02 EEY ? GO:0003677 ... P37231 36179791
    789928 8dko:A (1.8) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0003842 ... F7X6I3 36448708
    789929 8dko:A (1.8) BS02 TFB 1.2.1.88
    1.5.5.2
    GO:0003842 ... F7X6I3 36448708
    789930 8dko:B (1.8) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0003842 ... F7X6I3 36448708
    789931 8dko:B (1.8) BS02 TFB 1.2.1.88
    1.5.5.2
    GO:0003842 ... F7X6I3 36448708
    789932 8dkp:A (1.23) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0003842 ... F7X6I3 36448708
    789933 8dkp:A (1.23) BS02 TFB 1.2.1.88
    1.5.5.2
    GO:0003842 ... F7X6I3 36448708
    789934 8dkp:B (1.23) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0003842 ... F7X6I3 36448708
    789935 8dkp:B (1.23) BS02 TFB 1.2.1.88
    1.5.5.2
    GO:0003842 ... F7X6I3 36448708
    789936 8dkq:A (1.72) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0003842 ... F7X6I3 36448708
    789937 8dkq:A (1.72) BS02 SJU 1.2.1.88
    1.5.5.2
    GO:0003842 ... F7X6I3 36448708
    789938 8dkq:B (1.72) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0003842 ... F7X6I3 36448708
    789939 8dkq:B (1.72) BS02 SJU 1.2.1.88
    1.5.5.2
    GO:0003842 ... F7X6I3 36448708
    789940 8dkr:A (2.05) BS01 MG 3.1.-.- N/A A0A2K8HL37 36007626
    789941 8dkr:B (2.05) BS01 MG 3.1.-.- N/A A0A2K8HL37 36007626
    789942 8dks:A (2.45) BS01 SO9 2.7.11.1 GO:0000287 ... Q9NWZ3 35863718
    789943 8dks:B (2.45) BS01 SO9 2.7.11.1 GO:0000287 ... Q9NWZ3 35863718
    789944 8dkt:A (2.38) BS01 GDP ? GO:0005525 ... P42207 36576069
    789945 8dkt:A (2.38) BS02 GTP ? GO:0005525 ... P42207 36576069
    789946 8dkt:B (2.38) BS01 GDP ? GO:0005525 ... P54359 36576069
    789947 8dkt:B (2.38) BS02 GTP ? GO:0005525 ... P54359 36576069
    789948 8dku:A (3.2) BS01 UBO ? GO:0005515 ... O67181 36064941
    789949 8dku:A (3.2) BS02 UBH ? GO:0005515 ... O67181 36064941
    789950 8dkv:A (1.59) BS01 peptide ? GO:0003677 ... P37231 36179791
    789951 8dkv:A (1.59) BS02 SKL ? GO:0003677 ... P37231 36179791
    789952 8dky:A (1.61) BS01 U90 ? N/A O67181 36064941
    789953 8dky:B (1.61) BS01 U90 ? N/A O67181 36064941
    789954 8dl1:A (2.09) BS01 GLC N/A GO:0005975 ... N/A 37500984
    789955 8dl1:A (2.09) BS02 GLC N/A GO:0005975 ... N/A 37500984
    789956 8dl1:A (2.09) BS03 GLC N/A GO:0005975 ... N/A 37500984
    789957 8dl1:A (2.09) BS04 GLC N/A GO:0005975 ... N/A 37500984
    789958 8dl1:A (2.09) BS05 GLC N/A GO:0005975 ... N/A 37500984
    789959 8dl1:A (2.09) BS06 GLC N/A GO:0005975 ... N/A 37500984
    789960 8dl1:A (2.09) BS07 GLC N/A GO:0005975 ... N/A 37500984
    789961 8dl1:A (2.09) BS08 GLC N/A GO:0005975 ... N/A 37500984
    789962 8dl1:A (2.09) BS09 GLC N/A GO:0005975 ... N/A 37500984
    789963 8dl1:A (2.09) BS10 GLC N/A GO:0005975 ... N/A 37500984
    789964 8dl1:A (2.09) BS11 GLC N/A GO:0005975 ... N/A 37500984
    789965 8dl1:A (2.09) BS12 CA N/A GO:0005975 ... N/A 37500984
    789966 8dl1:A (2.09) BS13 MN N/A GO:0005975 ... N/A 37500984
    789967 8dl1:B (2.09) BS01 GLC N/A GO:0005975 ... N/A 37500984
    789968 8dl1:B (2.09) BS02 GLC N/A GO:0005975 ... N/A 37500984
    789969 8dl1:B (2.09) BS03 GLC N/A GO:0005975 ... N/A 37500984
    789970 8dl1:B (2.09) BS04 GLC N/A GO:0005975 ... N/A 37500984
    789971 8dl1:B (2.09) BS05 GLC N/A GO:0005975 ... N/A 37500984
    789972 8dl1:B (2.09) BS06 GLC N/A GO:0005975 ... N/A 37500984
    789973 8dl1:B (2.09) BS07 GLC N/A GO:0005975 ... N/A 37500984
    789974 8dl1:B (2.09) BS08 GLC N/A GO:0005975 ... N/A 37500984
    789975 8dl1:B (2.09) BS09 GLC N/A GO:0005975 ... N/A 37500984
    789976 8dl1:B (2.09) BS10 GLC N/A GO:0005975 ... N/A 37500984
    789977 8dl1:B (2.09) BS11 CA N/A GO:0005975 ... N/A 37500984
    789978 8dl1:B (2.09) BS12 MN N/A GO:0005975 ... N/A 37500984
    789979 8dl1:C (2.09) BS01 GLC N/A GO:0005975 ... N/A 37500984
    789980 8dl1:C (2.09) BS02 GLC N/A GO:0005975 ... N/A 37500984
    789981 8dl1:C (2.09) BS03 GLC N/A GO:0005975 ... N/A 37500984
    789982 8dl1:C (2.09) BS04 GLC N/A GO:0005975 ... N/A 37500984
    789983 8dl1:C (2.09) BS05 GLC N/A GO:0005975 ... N/A 37500984
    789984 8dl1:C (2.09) BS06 GLC N/A GO:0005975 ... N/A 37500984
    789985 8dl1:C (2.09) BS07 GLC N/A GO:0005975 ... N/A 37500984
    789986 8dl1:C (2.09) BS08 GLC N/A GO:0005975 ... N/A 37500984
    789987 8dl1:C (2.09) BS09 GLC N/A GO:0005975 ... N/A 37500984
    789988 8dl1:C (2.09) BS10 GLC N/A GO:0005975 ... N/A 37500984
    789989 8dl1:C (2.09) BS11 GLC N/A GO:0005975 ... N/A 37500984
    789990 8dl1:C (2.09) BS12 CA N/A GO:0005975 ... N/A 37500984
    789991 8dl1:C (2.09) BS13 MN N/A GO:0005975 ... N/A 37500984
    789992 8dl1:D (2.09) BS01 GLC N/A GO:0005975 ... N/A 37500984
    789993 8dl1:D (2.09) BS02 GLC N/A GO:0005975 ... N/A 37500984
    789994 8dl1:D (2.09) BS03 GLC N/A GO:0005975 ... N/A 37500984
    789995 8dl1:D (2.09) BS04 GLC N/A GO:0005975 ... N/A 37500984
    789996 8dl1:D (2.09) BS05 GLC N/A GO:0005975 ... N/A 37500984
    789997 8dl1:D (2.09) BS06 GLC N/A GO:0005975 ... N/A 37500984
    789998 8dl1:D (2.09) BS07 GLC N/A GO:0005975 ... N/A 37500984
    789999 8dl1:D (2.09) BS08 GLC N/A GO:0005975 ... N/A 37500984
    790000 8dl1:D (2.09) BS09 GLC N/A GO:0005975 ... N/A 37500984

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).