SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    790201 8cvk:1V (2.5) BS01 rna ? GO:0003723 ... P60492 36316410
    790202 8cvk:1V (2.5) BS02 MG ? GO:0003723 ... P60492 36316410
    790203 8cvk:1V (2.5) BS03 MG ? GO:0003723 ... P60492 36316410
    790204 8cvk:1V (2.5) BS04 MG ? GO:0003723 ... P60492 36316410
    790205 8cvk:1V (2.5) BS05 MG ? GO:0003723 ... P60492 36316410
    790206 8cvk:1V (2.5) BS06 MG ? GO:0003723 ... P60492 36316410
    790207 8cvk:1W (2.5) BS01 rna ? GO:0003735 ... Q5SHP3 36316410
    790208 8cvk:1W (2.5) BS02 MG ? GO:0003735 ... Q5SHP3 36316410
    790209 8cvk:1W (2.5) BS03 MG ? GO:0003735 ... Q5SHP3 36316410
    790210 8cvk:1W (2.5) BS04 MG ? GO:0003735 ... Q5SHP3 36316410
    790211 8cvk:1X (2.5) BS01 rna ? GO:0003735 ... Q5SHP0 36316410
    790212 8cvk:1X (2.5) BS02 MG ? GO:0003735 ... Q5SHP0 36316410
    790213 8cvk:1X (2.5) BS03 MG ? GO:0003735 ... Q5SHP0 36316410
    790214 8cvk:1X (2.5) BS04 MG ? GO:0003735 ... Q5SHP0 36316410
    790215 8cvk:1X (2.5) BS05 MG ? GO:0003735 ... Q5SHP0 36316410
    790216 8cvk:1X (2.5) BS06 MG ? GO:0003735 ... Q5SHP0 36316410
    790217 8cvk:1Y (2.5) BS01 rna ? GO:0003723 ... Q5SHP9 36316410
    790218 8cvk:1Y (2.5) BS02 MG ? GO:0003723 ... Q5SHP9 36316410
    790219 8cvk:1Y (2.5) BS03 ZN ? GO:0003723 ... Q5SHP9 36316410
    790220 8cvk:1Z (2.5) BS01 rna ? GO:0003723 ... Q5SHZ1 36316410
    790221 8cvk:1Z (2.5) BS02 rna ? GO:0003723 ... Q5SHZ1 36316410
    790222 8cvk:1Z (2.5) BS03 MG ? GO:0003723 ... Q5SHZ1 36316410
    790223 8cvk:1b (2.5) BS01 rna ? GO:0003735 ... P80371 36316410
    790224 8cvk:1c (2.5) BS01 rna ? GO:0003676 ... P80372 36316410
    790225 8cvk:1d (2.5) BS01 rna ? GO:0003723 ... P80373 36316410
    790226 8cvk:1d (2.5) BS02 SF4 ? GO:0003723 ... P80373 36316410
    790227 8cvk:1e (2.5) BS01 rna ? GO:0003723 ... Q5SHQ5 36316410
    790228 8cvk:1e (2.5) BS02 MG ? GO:0003723 ... Q5SHQ5 36316410
    790229 8cvk:1e (2.5) BS03 MG ? GO:0003723 ... Q5SHQ5 36316410
    790230 8cvk:1f (2.5) BS01 rna ? GO:0003735 ... Q5SLP8 36316410
    790231 8cvk:1g (2.5) BS01 rna ? GO:0000049 ... P17291 36316410
    790232 8cvk:1g (2.5) BS02 rna ? GO:0000049 ... P17291 36316410
    790233 8cvk:1h (2.5) BS01 rna ? GO:0003735 ... P0DOY9 36316410
    790234 8cvk:1i (2.5) BS01 rna ? GO:0003723 ... P80374 36316410
    790235 8cvk:1j (2.5) BS01 rna ? GO:0000049 ... Q5SHN7 36316410
    790236 8cvk:1k (2.5) BS01 rna ? GO:0003735 ... P80376 36316410
    790237 8cvk:1k (2.5) BS02 MG ? GO:0003735 ... P80376 36316410
    790238 8cvk:1l (2.5) BS01 rna ? GO:0000049 ... Q5SHN3 36316410
    790239 8cvk:1l (2.5) BS02 rna ? GO:0000049 ... Q5SHN3 36316410
    790240 8cvk:1l (2.5) BS03 MG ? GO:0000049 ... Q5SHN3 36316410
    790241 8cvk:1m (2.5) BS01 rna ? GO:0000049 ... P80377 36316410
    790242 8cvk:1m (2.5) BS02 rna ? GO:0000049 ... P80377 36316410
    790243 8cvk:1m (2.5) BS03 rna ? GO:0000049 ... P80377 36316410
    790244 8cvk:1m (2.5) BS04 MG ? GO:0000049 ... P80377 36316410
    790245 8cvk:1n (2.5) BS01 rna ? GO:0003735 ... P0DOY6 36316410
    790246 8cvk:1n (2.5) BS02 ZN ? GO:0003735 ... P0DOY6 36316410
    790247 8cvk:1o (2.5) BS01 rna ? GO:0003735 ... Q5SJ76 36316410
    790248 8cvk:1o (2.5) BS02 rna ? GO:0003735 ... Q5SJ76 36316410
    790249 8cvk:1p (2.5) BS01 rna ? GO:0003735 ... Q5SJH3 36316410
    790250 8cvk:1q (2.5) BS01 rna ? GO:0003735 ... P0DOY7 36316410
    790251 8cvk:1r (2.5) BS01 rna ? GO:0003735 ... Q5SLQ0 36316410
    790252 8cvk:1s (2.5) BS01 rna ? GO:0000028 ... Q5SHP2 36316410
    790253 8cvk:1t (2.5) BS01 rna ? GO:0003723 ... P80380 36316410
    790254 8cvk:20 (2.5) BS01 rna ? GO:0003735 ... P60493 36316410
    790255 8cvk:20 (2.5) BS02 rna ? GO:0003735 ... P60493 36316410
    790256 8cvk:20 (2.5) BS03 rna ? GO:0003735 ... P60493 36316410
    790257 8cvk:21 (2.5) BS01 rna ? GO:0003735 ... P60494 36316410
    790258 8cvk:21 (2.5) BS02 rna ? GO:0003735 ... P60494 36316410
    790259 8cvk:22 (2.5) BS01 rna ? GO:0003735 ... Q5SHP6 36316410
    790260 8cvk:23 (2.5) BS01 rna ? GO:0003735 ... Q5SHQ6 36316410
    790261 8cvk:23 (2.5) BS02 rna ? GO:0003735 ... Q5SHQ6 36316410
    790262 8cvk:23 (2.5) BS03 MG ? GO:0003735 ... Q5SHQ6 36316410
    790263 8cvk:24 (2.5) BS01 rna ? GO:0003735 ... Q5SJE1 36316410
    790264 8cvk:24 (2.5) BS02 ZN ? GO:0003735 ... Q5SJE1 36316410
    790265 8cvk:25 (2.5) BS01 rna ? GO:0003735 ... P80339 36316410
    790266 8cvk:25 (2.5) BS02 MG ? GO:0003735 ... P80339 36316410
    790267 8cvk:25 (2.5) BS03 ZN ? GO:0003735 ... P80339 36316410
    790268 8cvk:26 (2.5) BS01 rna ? GO:0003735 ... P35871 36316410
    790269 8cvk:26 (2.5) BS02 MG ? GO:0003735 ... P35871 36316410
    790270 8cvk:26 (2.5) BS03 ZN ? GO:0003735 ... P35871 36316410
    790271 8cvk:27 (2.5) BS01 rna ? GO:0003735 ... P80340 36316410
    790272 8cvk:28 (2.5) BS01 rna ? GO:0003735 ... Q5SKU1 36316410
    790273 8cvk:28 (2.5) BS02 MG ? GO:0003735 ... Q5SKU1 36316410
    790274 8cvk:29 (2.5) BS01 rna ? GO:0003735 ... Q5SHR2 36316410
    790275 8cvk:29 (2.5) BS02 ZN ? GO:0003735 ... Q5SHR2 36316410
    790276 8cvk:2D (2.5) BS01 rna ? GO:0002181 ... P60405 36316410
    790277 8cvk:2D (2.5) BS02 rna ? GO:0002181 ... P60405 36316410
    790278 8cvk:2D (2.5) BS03 MG ? GO:0002181 ... P60405 36316410
    790279 8cvk:2D (2.5) BS04 MG ? GO:0002181 ... P60405 36316410
    790280 8cvk:2D (2.5) BS05 MG ? GO:0002181 ... P60405 36316410
    790281 8cvk:2D (2.5) BS06 MG ? GO:0002181 ... P60405 36316410
    790282 8cvk:2E (2.5) BS01 rna ? GO:0003735 ... Q5SHN8 36316410
    790283 8cvk:2E (2.5) BS02 MG ? GO:0003735 ... Q5SHN8 36316410
    790284 8cvk:2E (2.5) BS03 MG ? GO:0003735 ... Q5SHN8 36316410
    790285 8cvk:2F (2.5) BS01 rna ? GO:0003735 ... Q5SHN9 36316410
    790286 8cvk:2F (2.5) BS02 MG ? GO:0003735 ... Q5SHN9 36316410
    790287 8cvk:2F (2.5) BS03 MG ? GO:0003735 ... Q5SHN9 36316410
    790288 8cvk:2F (2.5) BS04 MG ? GO:0003735 ... Q5SHN9 36316410
    790289 8cvk:2G (2.5) BS01 rna ? GO:0000049 ... Q5SHQ0 36316410
    790290 8cvk:2G (2.5) BS02 rna ? GO:0000049 ... Q5SHQ0 36316410
    790291 8cvk:2G (2.5) BS03 rna ? GO:0000049 ... Q5SHQ0 36316410
    790292 8cvk:2G (2.5) BS04 MG ? GO:0000049 ... Q5SHQ0 36316410
    790293 8cvk:2H (2.5) BS01 rna ? GO:0002181 ... P0DOY8 36316410
    790294 8cvk:2I (2.5) BS01 rna ? GO:0003735 ... Q5SLQ1 36316410
    790295 8cvk:2N (2.5) BS01 rna ? GO:0003729 ... P60488 36316410
    790296 8cvk:2O (2.5) BS01 rna ? GO:0003735 ... Q5SHP8 36316410
    790297 8cvk:2O (2.5) BS02 rna ? GO:0003735 ... Q5SHP8 36316410
    790298 8cvk:2P (2.5) BS01 rna ? GO:0003735 ... Q5SHQ7 36316410
    790299 8cvk:2Q (2.5) BS01 rna ? GO:0003735 ... P60489 36316410
    790300 8cvk:2Q (2.5) BS02 rna ? GO:0003735 ... P60489 36316410
    790301 8cvk:2Q (2.5) BS03 rna ? GO:0003735 ... P60489 36316410
    790302 8cvk:2Q (2.5) BS04 rna ? GO:0003735 ... P60489 36316410
    790303 8cvk:2Q (2.5) BS05 MG ? GO:0003735 ... P60489 36316410
    790304 8cvk:2Q (2.5) BS06 MG ? GO:0003735 ... P60489 36316410
    790305 8cvk:2R (2.5) BS01 rna ? GO:0003735 ... Q9Z9H5 36316410
    790306 8cvk:2S (2.5) BS01 rna ? GO:0003735 ... Q5SHQ4 36316410
    790307 8cvk:2S (2.5) BS02 rna ? GO:0003735 ... Q5SHQ4 36316410
    790308 8cvk:2T (2.5) BS01 rna ? GO:0003735 ... P60490 36316410
    790309 8cvk:2T (2.5) BS02 rna ? GO:0003735 ... P60490 36316410
    790310 8cvk:2T (2.5) BS03 MG ? GO:0003735 ... P60490 36316410
    790311 8cvk:2U (2.5) BS01 rna ? GO:0000027 ... P60491 36316410
    790312 8cvk:2U (2.5) BS02 MG ? GO:0000027 ... P60491 36316410
    790313 8cvk:2V (2.5) BS01 rna ? GO:0003723 ... P60492 36316410
    790314 8cvk:2V (2.5) BS02 MG ? GO:0003723 ... P60492 36316410
    790315 8cvk:2W (2.5) BS01 rna ? GO:0003735 ... Q5SHP3 36316410
    790316 8cvk:2W (2.5) BS02 MG ? GO:0003735 ... Q5SHP3 36316410
    790317 8cvk:2W (2.5) BS03 MG ? GO:0003735 ... Q5SHP3 36316410
    790318 8cvk:2X (2.5) BS01 rna ? GO:0003735 ... Q5SHP0 36316410
    790319 8cvk:2X (2.5) BS02 MG ? GO:0003735 ... Q5SHP0 36316410
    790320 8cvk:2Y (2.5) BS01 rna ? GO:0003723 ... Q5SHP9 36316410
    790321 8cvk:2Y (2.5) BS02 ZN ? GO:0003723 ... Q5SHP9 36316410
    790322 8cvk:2Z (2.5) BS01 rna ? GO:0003723 ... Q5SHZ1 36316410
    790323 8cvk:2Z (2.5) BS02 rna ? GO:0003723 ... Q5SHZ1 36316410
    790324 8cvk:2Z (2.5) BS03 MG ? GO:0003723 ... Q5SHZ1 36316410
    790325 8cvk:2b (2.5) BS01 rna ? GO:0003735 ... P80371 36316410
    790326 8cvk:2c (2.5) BS01 rna ? GO:0003676 ... P80372 36316410
    790327 8cvk:2d (2.5) BS01 rna ? GO:0003723 ... P80373 36316410
    790328 8cvk:2d (2.5) BS02 MG ? GO:0003723 ... P80373 36316410
    790329 8cvk:2d (2.5) BS03 SF4 ? GO:0003723 ... P80373 36316410
    790330 8cvk:2e (2.5) BS01 rna ? GO:0003723 ... Q5SHQ5 36316410
    790331 8cvk:2e (2.5) BS02 MG ? GO:0003723 ... Q5SHQ5 36316410
    790332 8cvk:2f (2.5) BS01 rna ? GO:0003735 ... Q5SLP8 36316410
    790333 8cvk:2g (2.5) BS01 rna ? GO:0000049 ... P17291 36316410
    790334 8cvk:2g (2.5) BS02 rna ? GO:0000049 ... P17291 36316410
    790335 8cvk:2g (2.5) BS03 MG ? GO:0000049 ... P17291 36316410
    790336 8cvk:2h (2.5) BS01 rna ? GO:0003735 ... P0DOY9 36316410
    790337 8cvk:2i (2.5) BS01 rna ? GO:0003723 ... P80374 36316410
    790338 8cvk:2i (2.5) BS02 rna ? GO:0003723 ... P80374 36316410
    790339 8cvk:2j (2.5) BS01 rna ? GO:0000049 ... Q5SHN7 36316410
    790340 8cvk:2k (2.5) BS01 rna ? GO:0003735 ... P80376 36316410
    790341 8cvk:2k (2.5) BS02 MG ? GO:0003735 ... P80376 36316410
    790342 8cvk:2l (2.5) BS01 rna ? GO:0000049 ... Q5SHN3 36316410
    790343 8cvk:2l (2.5) BS02 rna ? GO:0000049 ... Q5SHN3 36316410
    790344 8cvk:2l (2.5) BS03 MG ? GO:0000049 ... Q5SHN3 36316410
    790345 8cvk:2l (2.5) BS04 MG ? GO:0000049 ... Q5SHN3 36316410
    790346 8cvk:2l (2.5) BS05 MG ? GO:0000049 ... Q5SHN3 36316410
    790347 8cvk:2m (2.5) BS01 rna ? GO:0000049 ... P80377 36316410
    790348 8cvk:2m (2.5) BS02 rna ? GO:0000049 ... P80377 36316410
    790349 8cvk:2n (2.5) BS01 rna ? GO:0003735 ... P0DOY6 36316410
    790350 8cvk:2n (2.5) BS02 ZN ? GO:0003735 ... P0DOY6 36316410
    790351 8cvk:2o (2.5) BS01 rna ? GO:0003735 ... Q5SJ76 36316410
    790352 8cvk:2o (2.5) BS02 rna ? GO:0003735 ... Q5SJ76 36316410
    790353 8cvk:2p (2.5) BS01 rna ? GO:0003735 ... Q5SJH3 36316410
    790354 8cvk:2q (2.5) BS01 rna ? GO:0003735 ... P0DOY7 36316410
    790355 8cvk:2q (2.5) BS02 MG ? GO:0003735 ... P0DOY7 36316410
    790356 8cvk:2q (2.5) BS03 MG ? GO:0003735 ... P0DOY7 36316410
    790357 8cvk:2r (2.5) BS01 rna ? GO:0003735 ... Q5SLQ0 36316410
    790358 8cvk:2s (2.5) BS01 rna ? GO:0000028 ... Q5SHP2 36316410
    790359 8cvk:2t (2.5) BS01 rna ? GO:0003723 ... P80380 36316410
    790360 8cvl:10 (2.3) BS01 rna ? GO:0003735 ... P60493 36316410
    790361 8cvl:10 (2.3) BS02 rna ? GO:0003735 ... P60493 36316410
    790362 8cvl:10 (2.3) BS03 rna ? GO:0003735 ... P60493 36316410
    790363 8cvl:10 (2.3) BS04 MG ? GO:0003735 ... P60493 36316410
    790364 8cvl:10 (2.3) BS05 MG ? GO:0003735 ... P60493 36316410
    790365 8cvl:10 (2.3) BS06 MG ? GO:0003735 ... P60493 36316410
    790366 8cvl:11 (2.3) BS01 rna ? GO:0003735 ... P60494 36316410
    790367 8cvl:11 (2.3) BS02 rna ? GO:0003735 ... P60494 36316410
    790368 8cvl:11 (2.3) BS03 MG ? GO:0003735 ... P60494 36316410
    790369 8cvl:11 (2.3) BS04 MG ? GO:0003735 ... P60494 36316410
    790370 8cvl:12 (2.3) BS01 rna ? GO:0003735 ... Q5SHP6 36316410
    790371 8cvl:12 (2.3) BS02 MG ? GO:0003735 ... Q5SHP6 36316410
    790372 8cvl:13 (2.3) BS01 rna ? GO:0003735 ... Q5SHQ6 36316410
    790373 8cvl:13 (2.3) BS02 rna ? GO:0003735 ... Q5SHQ6 36316410
    790374 8cvl:13 (2.3) BS03 MG ? GO:0003735 ... Q5SHQ6 36316410
    790375 8cvl:13 (2.3) BS04 MG ? GO:0003735 ... Q5SHQ6 36316410
    790376 8cvl:14 (2.3) BS01 rna ? GO:0003735 ... Q5SJE1 36316410
    790377 8cvl:14 (2.3) BS02 rna ? GO:0003735 ... Q5SJE1 36316410
    790378 8cvl:14 (2.3) BS03 MG ? GO:0003735 ... Q5SJE1 36316410
    790379 8cvl:14 (2.3) BS04 ZN ? GO:0003735 ... Q5SJE1 36316410
    790380 8cvl:15 (2.3) BS01 rna ? GO:0003735 ... P80339 36316410
    790381 8cvl:15 (2.3) BS02 MG ? GO:0003735 ... P80339 36316410
    790382 8cvl:15 (2.3) BS03 ZN ? GO:0003735 ... P80339 36316410
    790383 8cvl:16 (2.3) BS01 rna ? GO:0003735 ... P35871 36316410
    790384 8cvl:16 (2.3) BS02 MG ? GO:0003735 ... P35871 36316410
    790385 8cvl:16 (2.3) BS03 ZN ? GO:0003735 ... P35871 36316410
    790386 8cvl:17 (2.3) BS01 rna ? GO:0003735 ... P80340 36316410
    790387 8cvl:17 (2.3) BS02 MG ? GO:0003735 ... P80340 36316410
    790388 8cvl:17 (2.3) BS03 MG ? GO:0003735 ... P80340 36316410
    790389 8cvl:18 (2.3) BS01 rna ? GO:0003735 ... Q5SKU1 36316410
    790390 8cvl:18 (2.3) BS02 MG ? GO:0003735 ... Q5SKU1 36316410
    790391 8cvl:18 (2.3) BS03 MG ? GO:0003735 ... Q5SKU1 36316410
    790392 8cvl:18 (2.3) BS04 MG ? GO:0003735 ... Q5SKU1 36316410
    790393 8cvl:19 (2.3) BS01 rna ? GO:0003735 ... Q5SHR2 36316410
    790394 8cvl:19 (2.3) BS02 ZN ? GO:0003735 ... Q5SHR2 36316410
    790395 8cvl:1D (2.3) BS01 rna ? GO:0002181 ... P60405 36316410
    790396 8cvl:1D (2.3) BS02 rna ? GO:0002181 ... P60405 36316410
    790397 8cvl:1D (2.3) BS03 MG ? GO:0002181 ... P60405 36316410
    790398 8cvl:1D (2.3) BS04 MG ? GO:0002181 ... P60405 36316410
    790399 8cvl:1D (2.3) BS05 MG ? GO:0002181 ... P60405 36316410
    790400 8cvl:1D (2.3) BS06 MG ? GO:0002181 ... P60405 36316410

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).