SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    790401 8dq3:B (1.67) BS01 MN 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    790402 8dq3:B (1.67) BS02 MN 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    790403 8dq3:B (1.67) BS03 MG 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    790404 8dq3:C (1.67) BS01 MN 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    790405 8dq3:C (1.67) BS02 MN 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    790406 8dq3:C (1.67) BS03 MG 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    790407 8dq3:D (1.67) BS01 MN 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    790408 8dq3:D (1.67) BS02 MN 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    790409 8dq3:D (1.67) BS03 MG 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    790410 8dq4:A (2.35) BS01 MN 1.17.4.1 GO:0004748 ... A5FCJ5 N/A
    790411 8dq4:A (2.35) BS02 MN 1.17.4.1 GO:0004748 ... A5FCJ5 N/A
    790412 8dq4:B (2.35) BS01 MN 1.17.4.1 GO:0004748 ... A5FCJ5 N/A
    790413 8dq4:B (2.35) BS02 MN 1.17.4.1 GO:0004748 ... A5FCJ5 N/A
    790414 8dq5:A (2.1) BS01 MN 1.17.4.1 GO:0004748 ... A5FCJ5 N/A
    790415 8dq5:A (2.1) BS02 MN 1.17.4.1 GO:0004748 ... A5FCJ5 N/A
    790416 8dq5:B (2.1) BS01 MN 1.17.4.1 GO:0004748 ... A5FCJ5 N/A
    790417 8dq5:B (2.1) BS02 MN 1.17.4.1 GO:0004748 ... A5FCJ5 N/A
    790418 8dq6:A (1.56) BS01 CA 5.3.2.1
    5.3.3.12
    GO:0005125 ... Q9LU69 37988455
    790419 8dq6:A (1.56) BS02 CA 5.3.2.1
    5.3.3.12
    GO:0005125 ... Q9LU69 37988455
    790420 8dq6:B (1.56) BS01 CA 5.3.2.1
    5.3.3.12
    GO:0005125 ... Q9LU69 37988455
    790421 8dq6:B (1.56) BS02 CA 5.3.2.1
    5.3.3.12
    GO:0005125 ... Q9LU69 37988455
    790422 8dq6:C (1.56) BS01 CA 5.3.2.1
    5.3.3.12
    GO:0005125 ... Q9LU69 37988455
    790423 8dq7:A (2.1) BS01 FDA 1.4.2.2 GO:0000166 ... F8G0P2 37770699
    790424 8dq7:B (2.1) BS01 FDA 1.4.2.2 GO:0000166 ... F8G0P2 37770699
    790425 8dq8:A (1.9) BS01 NCT 1.4.2.2 GO:0000166 ... F8G0P2 37770699
    790426 8dq8:A (1.9) BS02 FDA 1.4.2.2 GO:0000166 ... F8G0P2 37770699
    790427 8dq8:B (1.9) BS01 NCT 1.4.2.2 GO:0000166 ... F8G0P2 37770699
    790428 8dq8:B (1.9) BS02 FDA 1.4.2.2 GO:0000166 ... F8G0P2 37770699
    790429 8dq9:A (2.8) BS01 ZN 1.1.1.193
    3.5.4.26
    GO:0003824 ... A0A0H3FX83 N/A
    790430 8dq9:B (2.8) BS01 ZN 1.1.1.193
    3.5.4.26
    GO:0003824 ... A0A0H3FX83 N/A
    790431 8dq9:B (2.8) BS02 GDP 1.1.1.193
    3.5.4.26
    GO:0003824 ... A0A0H3FX83 N/A
    790432 8dqb:A (2.5) BS01 ZN 1.1.1.193
    3.5.4.26
    GO:0003824 ... A0A0H3FX83 N/A
    790433 8dqb:A (2.5) BS02 ZN 1.1.1.193
    3.5.4.26
    GO:0003824 ... A0A0H3FX83 N/A
    790434 8dqc:A (2.7) BS01 ZN 1.1.1.193
    3.5.4.26
    GO:0003824 ... A0A0H3FX83 N/A
    790435 8dqc:B (2.7) BS01 ZN 1.1.1.193
    3.5.4.26
    GO:0003824 ... A0A0H3FX83 N/A
    790436 8dqd:A (1.78) BS01 UD2 2.4.1.290 GO:0016757 ... A0A0M4SVA9 38019455
    790437 8dqf:A (2.8) BS01 VGV 4.2.1.1 GO:0004089 ... Q50940 36655133
    790438 8dqf:A (2.8) BS02 ZN 4.2.1.1 GO:0004089 ... Q50940 36655133
    790439 8dqf:C (2.8) BS01 VGV 4.2.1.1 GO:0004089 ... Q50940 36655133
    790440 8dqf:C (2.8) BS02 ZN 4.2.1.1 GO:0004089 ... Q50940 36655133
    790441 8dqf:E (2.8) BS01 VGV 4.2.1.1 GO:0004089 ... Q50940 36655133
    790442 8dqf:E (2.8) BS02 ZN 4.2.1.1 GO:0004089 ... Q50940 36655133
    790443 8dqf:G (2.8) BS01 VGV 4.2.1.1 GO:0004089 ... Q50940 36655133
    790444 8dqf:G (2.8) BS02 ZN 4.2.1.1 GO:0004089 ... Q50940 36655133
    790445 8dqg:A (1.49) BS01 ANP ? GO:0004812 ... A0A3G3IHP7 36395426
    790446 8dqg:A (1.49) BS02 MG ? GO:0004812 ... A0A3G3IHP7 36395426
    790447 8dqg:D (1.49) BS01 ANP ? GO:0004812 ... A0A3G3IHP7 36395426
    790448 8dqg:D (1.49) BS02 T7Q ? GO:0004812 ... A0A3G3IHP7 36395426
    790449 8dqg:D (1.49) BS03 MG ? GO:0004812 ... A0A3G3IHP7 36395426
    790450 8dqh:A (1.52) BS01 ATP ? GO:0004812 ... A0A3G3IHP7 36395426
    790451 8dqh:A (1.52) BS02 MG ? GO:0004812 ... A0A3G3IHP7 36395426
    790452 8dqh:D (1.52) BS01 ATP ? GO:0004812 ... A0A3G3IHP7 36395426
    790453 8dqh:D (1.52) BS02 T7Q ? GO:0004812 ... A0A3G3IHP7 36395426
    790454 8dqh:D (1.52) BS03 MG ? GO:0004812 ... A0A3G3IHP7 36395426
    790455 8dqi:A (1.54) BS01 ATP ? GO:0004812 ... A0A3G3IHP7 36395426
    790456 8dqi:D (1.54) BS01 ATP ? GO:0004812 ... A0A3G3IHP7 36395426
    790457 8dqi:D (1.54) BS02 T7Q ? GO:0004812 ... A0A3G3IHP7 36395426
    790458 8dqi:D (1.54) BS03 MG ? GO:0004812 ... A0A3G3IHP7 36395426
    790459 8dqj:A (1.54) BS01 AMP ? GO:0004812 ... A0A3G3IHP7 36395426
    790460 8dqj:D (1.54) BS01 ATP ? GO:0004812 ... A0A3G3IHP7 36395426
    790461 8dqj:D (1.54) BS02 T7Q ? GO:0004812 ... A0A3G3IHP7 36395426
    790462 8dqj:D (1.54) BS03 MG ? GO:0004812 ... A0A3G3IHP7 36395426
    790463 8dqn:A (1.8) BS01 ZN N/A GO:0008798 ... N/A 37221236
    790464 8dqn:A (1.8) BS02 ZN N/A GO:0008798 ... N/A 37221236
    790465 8dqn:B (1.8) BS01 ZN N/A GO:0008798 ... N/A 37221236
    790466 8dqn:B (1.8) BS02 ZN N/A GO:0008798 ... N/A 37221236
    790467 8dqn:C (1.8) BS01 ZN N/A GO:0008798 ... N/A 37221236
    790468 8dqn:C (1.8) BS02 ZN N/A GO:0008798 ... N/A 37221236
    790469 8dqn:D (1.8) BS01 ZN N/A GO:0008798 ... N/A 37221236
    790470 8dqn:D (1.8) BS02 ZN N/A GO:0008798 ... N/A 37221236
    790471 8dqn:E (1.8) BS01 ZN N/A GO:0008798 ... N/A 37221236
    790472 8dqn:E (1.8) BS02 ZN N/A GO:0008798 ... N/A 37221236
    790473 8dqn:F (1.8) BS01 ZN N/A GO:0008798 ... N/A 37221236
    790474 8dqn:F (1.8) BS02 ZN N/A GO:0008798 ... N/A 37221236
    790475 8dqn:G (1.8) BS01 ZN N/A GO:0008798 ... N/A 37221236
    790476 8dqn:G (1.8) BS02 ZN N/A GO:0008798 ... N/A 37221236
    790477 8dqn:H (1.8) BS01 ZN N/A GO:0008798 ... N/A 37221236
    790478 8dqn:H (1.8) BS02 ZN N/A GO:0008798 ... N/A 37221236
    790479 8dqo:A (1.9) BS01 CA ? GO:0009805 ... Q8LF28 36737607
    790480 8dqo:B (1.9) BS01 CA ? GO:0009805 ... Q8LF28 36737607
    790481 8dqp:A (2.48) BS01 T83 ? GO:0009805 ... Q8LF28 36737607
    790482 8dqp:A (2.48) BS02 CA ? GO:0009805 ... Q8LF28 36737607
    790483 8dqp:B (2.48) BS01 CA ? GO:0009805 ... Q8LF28 36737607
    790484 8dqq:A (2.33) BS01 07L ? GO:0009805 ... Q8LF28 36737607
    790485 8dqq:A (2.33) BS02 CA ? GO:0009805 ... Q8LF28 36737607
    790486 8dqq:B (2.33) BS01 CA ? GO:0009805 ... Q8LF28 36737607
    790487 8dqr:A (2.26) BS01 COA ? GO:0009805 ... Q8LF28 36737607
    790488 8dqr:A (2.26) BS02 CA ? GO:0009805 ... Q8LF28 36737607
    790489 8dqs:A (2.45) BS01 MN ? GO:0003723 ... C6H0Y9 N/A
    790490 8dqs:A (2.45) BS02 MN ? GO:0003723 ... C6H0Y9 N/A
    790491 8dqs:A (2.45) BS03 T8I ? GO:0003723 ... C6H0Y9 N/A
    790492 8dqs:A (2.45) BS04 QQ4 ? GO:0003723 ... C6H0Y9 N/A
    790493 8dqt:A (1.31) BS01 U35 2.7.11.1 GO:0004672 ... O15530 37311034
    790494 8dqt:A (1.31) BS02 U35 2.7.11.1 GO:0004672 ... O15530 37311034
    790495 8dqv:A (1.52) BS01 O 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    790496 8dqv:A (1.52) BS02 MG 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    790497 8dqv:A (1.52) BS03 FCO 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    790498 8dqv:A (1.52) BS04 F3S 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    790499 8dqv:B (1.52) BS01 VK3 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    790500 8dqv:B (1.52) BS02 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    790501 8dqv:B (1.52) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    790502 8dqv:B (1.52) BS04 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    790503 8dqv:C (1.52) BS01 O 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    790504 8dqv:C (1.52) BS02 MG 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    790505 8dqv:C (1.52) BS03 FCO 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    790506 8dqv:C (1.52) BS04 F3S 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    790507 8dqv:D (1.52) BS01 VK3 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    790508 8dqv:D (1.52) BS02 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    790509 8dqv:D (1.52) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    790510 8dqv:D (1.52) BS04 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    790511 8dqw:A (2.1) BS01 dna ? GO:0000077 ... P32641 35939393
    790512 8dqw:A (2.1) BS02 dna ? GO:0000077 ... P32641 35939393
    790513 8dqw:A (2.1) BS03 AGS ? GO:0000077 ... P32641 35939393
    790514 8dqw:A (2.1) BS04 MG ? GO:0000077 ... P32641 35939393
    790515 8dqw:B (2.1) BS01 dna ? GO:0000077 ... P40339 35939393
    790516 8dqw:B (2.1) BS02 AGS ? GO:0000077 ... P40339 35939393
    790517 8dqw:C (2.1) BS01 dna ? GO:0000077 ... P38629 35939393
    790518 8dqw:C (2.1) BS02 AGS ? GO:0000077 ... P38629 35939393
    790519 8dqw:C (2.1) BS03 AGS ? GO:0000077 ... P38629 35939393
    790520 8dqw:D (2.1) BS01 dna ? GO:0000076 ... P40348 35939393
    790521 8dqw:D (2.1) BS02 AGS ? GO:0000076 ... P40348 35939393
    790522 8dqw:D (2.1) BS03 AGS ? GO:0000076 ... P40348 35939393
    790523 8dqw:E (2.1) BS01 dna ? GO:0000077 ... P38251 35939393
    790524 8dqw:E (2.1) BS02 AGS ? GO:0000077 ... P38251 35939393
    790525 8dqw:E (2.1) BS03 GDP ? GO:0000077 ... P38251 35939393
    790526 8dqx:A (2.1) BS01 dna ? GO:0000278 ... P38630 35939393
    790527 8dqx:A (2.1) BS02 dna ? GO:0000278 ... P38630 35939393
    790528 8dqx:A (2.1) BS03 dna ? GO:0000278 ... P38630 35939393
    790529 8dqx:A (2.1) BS04 AGS ? GO:0000278 ... P38630 35939393
    790530 8dqx:B (2.1) BS01 dna ? GO:0000077 ... P40339 35939393
    790531 8dqx:B (2.1) BS02 AGS ? GO:0000077 ... P40339 35939393
    790532 8dqx:B (2.1) BS03 AGS ? GO:0000077 ... P40339 35939393
    790533 8dqx:C (2.1) BS01 AGS ? GO:0000077 ... P38629 35939393
    790534 8dqx:C (2.1) BS02 AGS ? GO:0000077 ... P38629 35939393
    790535 8dqx:D (2.1) BS01 AGS ? GO:0000076 ... P40348 35939393
    790536 8dqx:D (2.1) BS02 AGS ? GO:0000076 ... P40348 35939393
    790537 8dqx:E (2.1) BS01 AGS ? GO:0000077 ... P38251 35939393
    790538 8dqx:E (2.1) BS02 GDP ? GO:0000077 ... P38251 35939393
    790539 8dqz:A (2.92) BS01 dna ? GO:0000278 ... P38630 35939393
    790540 8dqz:A (2.92) BS02 dna ? GO:0000278 ... P38630 35939393
    790541 8dqz:A (2.92) BS03 AGS ? GO:0000278 ... P38630 35939393
    790542 8dqz:B (2.92) BS01 dna ? GO:0000077 ... P40339 35939393
    790543 8dqz:B (2.92) BS02 AGS ? GO:0000077 ... P40339 35939393
    790544 8dqz:C (2.92) BS01 dna ? GO:0000077 ... P38629 35939393
    790545 8dqz:C (2.92) BS02 AGS ? GO:0000077 ... P38629 35939393
    790546 8dqz:C (2.92) BS03 MG ? GO:0000077 ... P38629 35939393
    790547 8dqz:C (2.92) BS04 AGS ? GO:0000077 ... P38629 35939393
    790548 8dqz:D (2.92) BS01 AGS ? GO:0000076 ... P40348 35939393
    790549 8dqz:D (2.92) BS02 AGS ? GO:0000076 ... P40348 35939393
    790550 8dqz:E (2.92) BS01 AGS ? GO:0000077 ... P38251 35939393
    790551 8dqz:E (2.92) BS02 GDP ? GO:0000077 ... P38251 35939393
    790552 8dr0:A (2.42) BS01 dna ? GO:0000278 ... P38630 35939393
    790553 8dr0:A (2.42) BS02 dna ? GO:0000278 ... P38630 35939393
    790554 8dr0:A (2.42) BS03 AGS ? GO:0000278 ... P38630 35939393
    790555 8dr0:A (2.42) BS04 MG ? GO:0000278 ... P38630 35939393
    790556 8dr0:B (2.42) BS01 dna ? GO:0000077 ... P40339 35939393
    790557 8dr0:B (2.42) BS02 AGS ? GO:0000077 ... P40339 35939393
    790558 8dr0:B (2.42) BS03 AGS ? GO:0000077 ... P40339 35939393
    790559 8dr0:C (2.42) BS01 dna ? GO:0000077 ... P38629 35939393
    790560 8dr0:C (2.42) BS02 AGS ? GO:0000077 ... P38629 35939393
    790561 8dr0:C (2.42) BS03 AGS ? GO:0000077 ... P38629 35939393
    790562 8dr0:D (2.42) BS01 AGS ? GO:0000076 ... P40348 35939393
    790563 8dr0:D (2.42) BS02 AGS ? GO:0000076 ... P40348 35939393
    790564 8dr0:E (2.42) BS01 AGS ? GO:0000077 ... P38251 35939393
    790565 8dr0:E (2.42) BS02 GDP ? GO:0000077 ... P38251 35939393
    790566 8dr1:A (2.14) BS01 dna ? GO:0000278 ... P38630 35939393
    790567 8dr1:A (2.14) BS02 dna ? GO:0000278 ... P38630 35939393
    790568 8dr1:A (2.14) BS03 dna ? GO:0000278 ... P38630 35939393
    790569 8dr1:A (2.14) BS04 dna ? GO:0000278 ... P38630 35939393
    790570 8dr1:A (2.14) BS05 AGS ? GO:0000278 ... P38630 35939393
    790571 8dr1:B (2.14) BS01 dna ? GO:0000077 ... P40339 35939393
    790572 8dr1:B (2.14) BS02 AGS ? GO:0000077 ... P40339 35939393
    790573 8dr1:B (2.14) BS03 AGS ? GO:0000077 ... P40339 35939393
    790574 8dr1:C (2.14) BS01 dna ? GO:0000077 ... P38629 35939393
    790575 8dr1:C (2.14) BS02 AGS ? GO:0000077 ... P38629 35939393
    790576 8dr1:C (2.14) BS03 AGS ? GO:0000077 ... P38629 35939393
    790577 8dr1:D (2.14) BS01 dna ? GO:0000076 ... P40348 35939393
    790578 8dr1:D (2.14) BS02 AGS ? GO:0000076 ... P40348 35939393
    790579 8dr1:D (2.14) BS03 AGS ? GO:0000076 ... P40348 35939393
    790580 8dr1:E (2.14) BS01 dna ? GO:0000077 ... P38251 35939393
    790581 8dr1:E (2.14) BS02 AGS ? GO:0000077 ... P38251 35939393
    790582 8dr1:E (2.14) BS03 GDP ? GO:0000077 ... P38251 35939393
    790583 8dr2:A (2.81) BS01 TE3 4.2.1.1 GO:0004089 ... Q50940 36655133
    790584 8dr2:A (2.81) BS02 ZN 4.2.1.1 GO:0004089 ... Q50940 36655133
    790585 8dr2:C (2.81) BS01 TE3 4.2.1.1 GO:0004089 ... Q50940 36655133
    790586 8dr2:C (2.81) BS02 ZN 4.2.1.1 GO:0004089 ... Q50940 36655133
    790587 8dr2:E (2.81) BS01 TE3 4.2.1.1 GO:0004089 ... Q50940 36655133
    790588 8dr2:E (2.81) BS02 ZN 4.2.1.1 GO:0004089 ... Q50940 36655133
    790589 8dr2:G (2.81) BS01 TE3 4.2.1.1 GO:0004089 ... Q50940 36655133
    790590 8dr2:G (2.81) BS02 ZN 4.2.1.1 GO:0004089 ... Q50940 36655133
    790591 8dr3:A (2.2) BS01 dna ? GO:0000278 ... P38630 35939393
    790592 8dr3:A (2.2) BS02 dna ? GO:0000278 ... P38630 35939393
    790593 8dr3:A (2.2) BS03 dna ? GO:0000278 ... P38630 35939393
    790594 8dr3:A (2.2) BS04 dna ? GO:0000278 ... P38630 35939393
    790595 8dr3:A (2.2) BS05 AGS ? GO:0000278 ... P38630 35939393
    790596 8dr3:B (2.2) BS01 dna ? GO:0000077 ... P40339 35939393
    790597 8dr3:B (2.2) BS02 dna ? GO:0000077 ... P40339 35939393
    790598 8dr3:B (2.2) BS03 AGS ? GO:0000077 ... P40339 35939393
    790599 8dr3:B (2.2) BS04 AGS ? GO:0000077 ... P40339 35939393
    790600 8dr3:C (2.2) BS01 dna ? GO:0000077 ... P38629 35939393

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).