SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    790601 8dr3:C (2.2) BS02 AGS ? GO:0000077 ... P38629 35939393
    790602 8dr3:D (2.2) BS01 dna ? GO:0000076 ... P40348 35939393
    790603 8dr3:D (2.2) BS02 AGS ? GO:0000076 ... P40348 35939393
    790604 8dr3:D (2.2) BS03 AGS ? GO:0000076 ... P40348 35939393
    790605 8dr3:E (2.2) BS01 AGS ? GO:0000077 ... P38251 35939393
    790606 8dr3:E (2.2) BS02 GDP ? GO:0000077 ... P38251 35939393
    790607 8dr4:A (2.45) BS01 dna ? GO:0000278 ... P38630 35939393
    790608 8dr4:A (2.45) BS02 dna ? GO:0000278 ... P38630 35939393
    790609 8dr4:A (2.45) BS03 dna ? GO:0000278 ... P38630 35939393
    790610 8dr4:A (2.45) BS04 dna ? GO:0000278 ... P38630 35939393
    790611 8dr4:A (2.45) BS05 AGS ? GO:0000278 ... P38630 35939393
    790612 8dr4:B (2.45) BS01 dna ? GO:0000077 ... P40339 35939393
    790613 8dr4:B (2.45) BS02 AGS ? GO:0000077 ... P40339 35939393
    790614 8dr4:B (2.45) BS03 AGS ? GO:0000077 ... P40339 35939393
    790615 8dr4:C (2.45) BS01 dna ? GO:0000077 ... P38629 35939393
    790616 8dr4:C (2.45) BS02 AGS ? GO:0000077 ... P38629 35939393
    790617 8dr4:C (2.45) BS03 AGS ? GO:0000077 ... P38629 35939393
    790618 8dr4:D (2.45) BS01 AGS ? GO:0000076 ... P40348 35939393
    790619 8dr4:D (2.45) BS02 AGS ? GO:0000076 ... P40348 35939393
    790620 8dr4:E (2.45) BS01 dna ? GO:0000077 ... P38251 35939393
    790621 8dr4:E (2.45) BS02 AGS ? GO:0000077 ... P38251 35939393
    790622 8dr4:E (2.45) BS03 GDP ? GO:0000077 ... P38251 35939393
    790623 8dr5:A (2.76) BS01 dna ? GO:0000278 ... P38630 35939393
    790624 8dr5:A (2.76) BS02 dna ? GO:0000278 ... P38630 35939393
    790625 8dr5:A (2.76) BS03 dna ? GO:0000278 ... P38630 35939393
    790626 8dr5:A (2.76) BS04 dna ? GO:0000278 ... P38630 35939393
    790627 8dr5:A (2.76) BS05 MG ? GO:0000278 ... P38630 35939393
    790628 8dr5:A (2.76) BS06 AGS ? GO:0000278 ... P38630 35939393
    790629 8dr5:B (2.76) BS01 dna ? GO:0000077 ... P40339 35939393
    790630 8dr5:B (2.76) BS02 AGS ? GO:0000077 ... P40339 35939393
    790631 8dr5:B (2.76) BS03 AGS ? GO:0000077 ... P40339 35939393
    790632 8dr5:C (2.76) BS01 dna ? GO:0000077 ... P38629 35939393
    790633 8dr5:C (2.76) BS02 AGS ? GO:0000077 ... P38629 35939393
    790634 8dr5:D (2.76) BS01 AGS ? GO:0000076 ... P40348 35939393
    790635 8dr5:D (2.76) BS02 AGS ? GO:0000076 ... P40348 35939393
    790636 8dr5:E (2.76) BS01 dna ? GO:0000077 ... P38251 35939393
    790637 8dr5:E (2.76) BS02 AGS ? GO:0000077 ... P38251 35939393
    790638 8dr5:E (2.76) BS03 GDP ? GO:0000077 ... P38251 35939393
    790639 8dr6:A (2.39) BS01 dna ? GO:0000278 ... P38630 35939393
    790640 8dr6:A (2.39) BS02 dna ? GO:0000278 ... P38630 35939393
    790641 8dr6:A (2.39) BS03 dna ? GO:0000278 ... P38630 35939393
    790642 8dr6:A (2.39) BS04 AGS ? GO:0000278 ... P38630 35939393
    790643 8dr6:B (2.39) BS01 dna ? GO:0000077 ... P40339 35939393
    790644 8dr6:B (2.39) BS02 AGS ? GO:0000077 ... P40339 35939393
    790645 8dr6:C (2.39) BS01 dna ? GO:0000077 ... P38629 35939393
    790646 8dr6:C (2.39) BS02 AGS ? GO:0000077 ... P38629 35939393
    790647 8dr6:C (2.39) BS03 AGS ? GO:0000077 ... P38629 35939393
    790648 8dr6:D (2.39) BS01 AGS ? GO:0000076 ... P40348 35939393
    790649 8dr6:D (2.39) BS02 AGS ? GO:0000076 ... P40348 35939393
    790650 8dr6:E (2.39) BS01 AGS ? GO:0000077 ... P38251 35939393
    790651 8dr6:E (2.39) BS02 ADP ? GO:0000077 ... P38251 35939393
    790652 8dr7:A (2.7) BS01 dna ? GO:0000278 ... P38630 35939393
    790653 8dr7:A (2.7) BS02 dna ? GO:0000278 ... P38630 35939393
    790654 8dr7:A (2.7) BS03 dna ? GO:0000278 ... P38630 35939393
    790655 8dr7:A (2.7) BS04 AGS ? GO:0000278 ... P38630 35939393
    790656 8dr7:B (2.7) BS01 dna ? GO:0000077 ... P40339 35939393
    790657 8dr7:B (2.7) BS02 AGS ? GO:0000077 ... P40339 35939393
    790658 8dr7:B (2.7) BS03 AGS ? GO:0000077 ... P40339 35939393
    790659 8dr7:C (2.7) BS01 dna ? GO:0000077 ... P38629 35939393
    790660 8dr7:C (2.7) BS02 AGS ? GO:0000077 ... P38629 35939393
    790661 8dr7:C (2.7) BS03 AGS ? GO:0000077 ... P38629 35939393
    790662 8dr7:D (2.7) BS01 AGS ? GO:0000076 ... P40348 35939393
    790663 8dr7:E (2.7) BS01 AGS ? GO:0000077 ... P38251 35939393
    790664 8dr7:E (2.7) BS02 GDP ? GO:0000077 ... P38251 35939393
    790665 8dr9:A (1.5) BS01 NAD 1.2.1.3 GO:0004029 ... P05091 N/A
    790666 8dr9:B (1.5) BS01 NAD 1.2.1.3 GO:0004029 ... P05091 N/A
    790667 8drb:A (2.59) BS01 TBW 4.2.1.1 GO:0004089 ... Q50940 36655133
    790668 8drb:A (2.59) BS02 ZN 4.2.1.1 GO:0004089 ... Q50940 36655133
    790669 8drb:C (2.59) BS01 TBW 4.2.1.1 GO:0004089 ... Q50940 36655133
    790670 8drb:C (2.59) BS02 ZN 4.2.1.1 GO:0004089 ... Q50940 36655133
    790671 8drb:E (2.59) BS01 TBW 4.2.1.1 GO:0004089 ... Q50940 36655133
    790672 8drb:E (2.59) BS02 ZN 4.2.1.1 GO:0004089 ... Q50940 36655133
    790673 8drb:G (2.59) BS01 TBW 4.2.1.1 GO:0004089 ... Q50940 36655133
    790674 8drb:G (2.59) BS02 ZN 4.2.1.1 GO:0004089 ... Q50940 36655133
    790675 8drd:A (1.89) BS01 HEC ? GO:0005506 ... P0ABE7 36154053
    790676 8drd:B (1.89) BS01 HEC ? GO:0005506 ... P0ABE7 36154053
    790677 8drf:A (1.7) BS01 HEC ? GO:0005506 ... P0ABE7 36154053
    790678 8drf:A (1.7) BS02 ZN ? GO:0005506 ... P0ABE7 36154053
    790679 8drj:A (2.4) BS01 HEC ? GO:0005506 ... P0ABE7 36154053
    790680 8drj:C (2.4) BS01 HEC ? GO:0005506 ... P0ABE7 36154053
    790681 8drl:A (1.65) BS01 HEC ? GO:0005506 ... P0ABE7 36154053
    790682 8drl:A (1.65) BS02 ZN ? GO:0005506 ... P0ABE7 36154053
    790683 8drm:A (1.55) BS01 HEC ? GO:0005506 ... P0ABE7 36154053
    790684 8drm:A (1.55) BS02 ZN ? GO:0005506 ... P0ABE7 36154053
    790685 8drp:A (2.84) BS01 CFF ? GO:0003151 ... P11716 37224245
    790686 8drp:A (2.84) BS02 ATP ? GO:0003151 ... P11716 37224245
    790687 8drp:A (2.84) BS03 ZN ? GO:0003151 ... P11716 37224245
    790688 8drp:B (2.84) BS01 CFF ? GO:0003151 ... P11716 37224245
    790689 8drp:B (2.84) BS02 ATP ? GO:0003151 ... P11716 37224245
    790690 8drp:B (2.84) BS03 ZN ? GO:0003151 ... P11716 37224245
    790691 8drp:C (2.84) BS01 CFF ? GO:0003151 ... P11716 37224245
    790692 8drp:C (2.84) BS02 ATP ? GO:0003151 ... P11716 37224245
    790693 8drp:C (2.84) BS03 ZN ? GO:0003151 ... P11716 37224245
    790694 8drp:D (2.84) BS01 CFF ? GO:0003151 ... P11716 37224245
    790695 8drp:D (2.84) BS02 ATP ? GO:0003151 ... P11716 37224245
    790696 8drp:D (2.84) BS03 ZN ? GO:0003151 ... P11716 37224245
    790697 8ds7:H (1.88) BS01 peptide N/A N/A N/A N/A
    790698 8ds7:L (1.88) BS01 peptide N/A N/A N/A N/A
    790699 8ds8:A (1.84) BS01 peptide ? GO:0003682 ... O15417 37938770
    790700 8ds8:B (1.84) BS01 peptide ? GO:0003682 ... O15417 37938770
    790701 8dsc:A (1.321) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    790702 8dsc:A (1.321) BS02 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    790703 8dsc:A (1.321) BS03 TIE 2.4.2.12 GO:0005125 ... P43490 36746631
    790704 8dsc:A (1.321) BS04 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    790705 8dsc:B (1.321) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    790706 8dsc:B (1.321) BS02 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    790707 8dsc:B (1.321) BS03 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    790708 8dsc:B (1.321) BS04 TIE 2.4.2.12 GO:0005125 ... P43490 36746631
    790709 8dsd:A (1.429) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    790710 8dsd:A (1.429) BS02 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    790711 8dsd:A (1.429) BS03 TIW 2.4.2.12 GO:0005125 ... P43490 36746631
    790712 8dsd:A (1.429) BS04 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    790713 8dsd:B (1.429) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    790714 8dsd:B (1.429) BS02 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    790715 8dsd:B (1.429) BS03 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    790716 8dsd:B (1.429) BS04 TIW 2.4.2.12 GO:0005125 ... P43490 36746631
    790717 8dse:A (1.428) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    790718 8dse:A (1.428) BS02 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    790719 8dse:A (1.428) BS03 QCT 2.4.2.12 GO:0005125 ... P43490 36746631
    790720 8dse:A (1.428) BS04 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    790721 8dse:B (1.428) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    790722 8dse:B (1.428) BS02 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    790723 8dse:B (1.428) BS03 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    790724 8dse:B (1.428) BS04 QCT 2.4.2.12 GO:0005125 ... P43490 36746631
    790725 8dsf:A (1.5) BS01 ZN 2.3.2.27 N/A Q13490 36864023
    790726 8dsf:A (1.5) BS02 TO0 2.3.2.27 N/A Q13490 36864023
    790727 8dsf:B (1.5) BS01 ZN 2.3.2.27 N/A Q13490 36864023
    790728 8dsf:B (1.5) BS02 TO0 2.3.2.27 N/A Q13490 36864023
    790729 8dsf:C (1.5) BS01 TO0 2.3.2.27 N/A Q13490 36864023
    790730 8dsf:C (1.5) BS02 ZN 2.3.2.27 N/A Q13490 36864023
    790731 8dsf:C (1.5) BS03 TO0 2.3.2.27 N/A Q13490 36864023
    790732 8dsf:D (1.5) BS01 ZN 2.3.2.27 N/A Q13490 36864023
    790733 8dsf:D (1.5) BS02 TO0 2.3.2.27 N/A Q13490 36864023
    790734 8dsg:A (1.87) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 36875868
    790735 8dsg:B (1.87) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 36875868
    790736 8dsg:C (1.87) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 36875868
    790737 8dsg:D (1.87) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 36875868
    790738 8dsh:A (2.2) BS01 A12 2.4.2.12 GO:0005125 ... P43490 36746631
    790739 8dsh:A (2.2) BS02 QCT 2.4.2.12 GO:0005125 ... P43490 36746631
    790740 8dsh:A (2.2) BS03 A12 2.4.2.12 GO:0005125 ... P43490 36746631
    790741 8dsh:B (2.2) BS01 A12 2.4.2.12 GO:0005125 ... P43490 36746631
    790742 8dsh:B (2.2) BS02 A12 2.4.2.12 GO:0005125 ... P43490 36746631
    790743 8dsh:B (2.2) BS03 QCT 2.4.2.12 GO:0005125 ... P43490 36746631
    790744 8dsi:A (1.43) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    790745 8dsi:A (1.43) BS02 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    790746 8dsi:A (1.43) BS03 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    790747 8dsi:B (1.43) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    790748 8dsi:B (1.43) BS02 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    790749 8dsi:B (1.43) BS03 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    790750 8dsj:A (2.8) BS01 CU 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 36880254
    790751 8dsj:A (2.8) BS02 CU 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 36880254
    790752 8dsj:K (2.8) BS01 CU 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 36880254
    790753 8dsj:K (2.8) BS02 CU 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 36880254
    790754 8dsk:A (1.63) BS01 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    790755 8dsk:A (1.63) BS02 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    790756 8dsk:A (1.63) BS03 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    790757 8dsk:A (1.63) BS04 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    790758 8dsk:B (1.63) BS01 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    790759 8dsk:B (1.63) BS02 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    790760 8dsk:B (1.63) BS03 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    790761 8dsk:B (1.63) BS04 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    790762 8dsk:C (1.63) BS01 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    790763 8dsk:C (1.63) BS02 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    790764 8dsk:C (1.63) BS03 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    790765 8dsk:C (1.63) BS04 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    790766 8dsk:D (1.63) BS01 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    790767 8dsk:D (1.63) BS02 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    790768 8dsk:D (1.63) BS03 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    790769 8dsk:D (1.63) BS04 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    790770 8dsl:A (2.05) BS01 CU 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 36880254
    790771 8dsl:A (2.05) BS02 CU 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 36880254
    790772 8dsl:B (2.05) BS01 CU 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 36880254
    790773 8dsl:B (2.05) BS02 CU 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 36880254
    790774 8dsm:A (2.75) BS01 TK0 2.4.2.12 GO:0005125 ... P43490 N/A
    790775 8dsm:B (2.75) BS01 TK0 2.4.2.12 GO:0005125 ... P43490 N/A
    790776 8dsm:B (2.75) BS02 TK0 2.4.2.12 GO:0005125 ... P43490 N/A
    790777 8dsm:C (2.75) BS01 TK0 2.4.2.12 GO:0005125 ... P43490 N/A
    790778 8dsm:C (2.75) BS02 TK0 2.4.2.12 GO:0005125 ... P43490 N/A
    790779 8dsm:D (2.75) BS01 TK0 2.4.2.12 GO:0005125 ... P43490 N/A
    790780 8dsm:D (2.75) BS02 TK0 2.4.2.12 GO:0005125 ... P43490 N/A
    790781 8dsn:A (2.8) BS01 CU 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 36880254
    790782 8dsn:A (2.8) BS02 CU 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 36880254
    790783 8dsn:K (2.8) BS01 CU 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 36880254
    790784 8dsn:K (2.8) BS02 CU 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 36880254
    790785 8dso:B (2.334) BS01 TOO 2.7.10.2 GO:0004672 ... Q06187 36864023
    790786 8dso:D (2.334) BS01 TOO 2.3.2.27 N/A Q13490 36864023
    790787 8dso:D (2.334) BS02 ZN 2.3.2.27 N/A Q13490 36864023
    790788 8dsr:A (2.85) BS01 TWU 3.4.23.- GO:0004190 ... Q8IAS0 36216349
    790789 8dsr:B (2.85) BS01 TWU 3.4.23.- GO:0004190 ... Q8IAS0 36216349
    790790 8dsu:A (1.86) BS01 V2M 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36992489
    790791 8dsu:B (1.86) BS01 V2M 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36992489
    790792 8dsv:A (2.5) BS01 FDA 1.4.2.2 GO:0000166 ... F8G0P2 37770699
    790793 8dsv:B (2.5) BS01 FDA 1.4.2.2 GO:0000166 ... F8G0P2 37770699
    790794 8dsv:B (2.5) BS02 TXU 1.4.2.2 GO:0000166 ... F8G0P2 37770699
    790795 8dsw:A (2.39) BS01 MG 2.7.10.1 GO:0004672 ... P00533 N/A
    790796 8dsw:A (2.39) BS02 ANP 2.7.10.1 GO:0004672 ... P00533 N/A
    790797 8dsy:A (2.95) BS01 TJC ? GO:0003677 ... P37231 36179791
    790798 8dsy:B (2.95) BS01 TJC ? GO:0003677 ... P37231 36179791
    790799 8dsz:A (2.5) BS01 TJO ? GO:0003677 ... P37231 36179791
    790800 8dsz:B (2.5) BS01 TJO ? GO:0003677 ... P37231 36179791

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).