SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    790601 8cvl:2e (2.3) BS02 MG ? GO:0003723 ... Q5SHQ5 36316410
    790602 8cvl:2f (2.3) BS01 rna ? GO:0003735 ... Q5SLP8 36316410
    790603 8cvl:2f (2.3) BS02 MG ? GO:0003735 ... Q5SLP8 36316410
    790604 8cvl:2g (2.3) BS01 rna ? GO:0000049 ... P17291 36316410
    790605 8cvl:2g (2.3) BS02 rna ? GO:0000049 ... P17291 36316410
    790606 8cvl:2h (2.3) BS01 rna ? GO:0003735 ... P0DOY9 36316410
    790607 8cvl:2i (2.3) BS01 rna ? GO:0003723 ... P80374 36316410
    790608 8cvl:2i (2.3) BS02 rna ? GO:0003723 ... P80374 36316410
    790609 8cvl:2j (2.3) BS01 rna ? GO:0000049 ... Q5SHN7 36316410
    790610 8cvl:2k (2.3) BS01 rna ? GO:0003735 ... P80376 36316410
    790611 8cvl:2k (2.3) BS02 MG ? GO:0003735 ... P80376 36316410
    790612 8cvl:2l (2.3) BS01 rna ? GO:0000049 ... Q5SHN3 36316410
    790613 8cvl:2l (2.3) BS02 MG ? GO:0000049 ... Q5SHN3 36316410
    790614 8cvl:2l (2.3) BS03 MG ? GO:0000049 ... Q5SHN3 36316410
    790615 8cvl:2l (2.3) BS04 MG ? GO:0000049 ... Q5SHN3 36316410
    790616 8cvl:2m (2.3) BS01 rna ? GO:0000049 ... P80377 36316410
    790617 8cvl:2m (2.3) BS02 rna ? GO:0000049 ... P80377 36316410
    790618 8cvl:2m (2.3) BS03 rna ? GO:0000049 ... P80377 36316410
    790619 8cvl:2n (2.3) BS01 rna ? GO:0003735 ... P0DOY6 36316410
    790620 8cvl:2n (2.3) BS02 ZN ? GO:0003735 ... P0DOY6 36316410
    790621 8cvl:2o (2.3) BS01 rna ? GO:0003735 ... Q5SJ76 36316410
    790622 8cvl:2o (2.3) BS02 rna ? GO:0003735 ... Q5SJ76 36316410
    790623 8cvl:2p (2.3) BS01 rna ? GO:0003735 ... Q5SJH3 36316410
    790624 8cvl:2q (2.3) BS01 rna ? GO:0003735 ... P0DOY7 36316410
    790625 8cvl:2q (2.3) BS02 MG ? GO:0003735 ... P0DOY7 36316410
    790626 8cvl:2r (2.3) BS01 rna ? GO:0003735 ... Q5SLQ0 36316410
    790627 8cvl:2r (2.3) BS02 MG ? GO:0003735 ... Q5SLQ0 36316410
    790628 8cvl:2s (2.3) BS01 rna ? GO:0000028 ... Q5SHP2 36316410
    790629 8cvl:2t (2.3) BS01 rna ? GO:0003723 ... P80380 36316410
    790630 8cvm:0 (2.66) BS01 rna ? GO:0003735 ... Q6A6J5 36864821
    790631 8cvm:0 (2.66) BS02 ZN ? GO:0003735 ... Q6A6J5 36864821
    790632 8cvm:1 (2.66) BS01 rna ? GO:0003735 ... Q6A5A1 36864821
    790633 8cvm:1 (2.66) BS02 MG ? GO:0003735 ... Q6A5A1 36864821
    790634 8cvm:2 (2.66) BS01 rna ? GO:0003735 ... Q6A7V2 36864821
    790635 8cvm:3 (2.66) BS01 rna ? GO:0003735 ... Q6A6Q7 36864821
    790636 8cvm:4 (2.66) BS01 rna ? GO:0003735 ... Q6A8B4 36864821
    790637 8cvm:4 (2.66) BS02 ZN ? GO:0003735 ... Q6A8B4 36864821
    790638 8cvm:c (2.66) BS01 rna ? GO:0002181 ... Q6A6M9 36864821
    790639 8cvm:c (2.66) BS02 MG ? GO:0002181 ... Q6A6M9 36864821
    790640 8cvm:d (2.66) BS01 rna ? GO:0003735 ... Q6A6M6 36864821
    790641 8cvm:e (2.66) BS01 rna ? GO:0003735 ... Q6A6M7 36864821
    790642 8cvm:f (2.66) BS01 rna ? GO:0000049 ... Q6A6N8 36864821
    790643 8cvm:f (2.66) BS02 rna ? GO:0000049 ... Q6A6N8 36864821
    790644 8cvm:f (2.66) BS03 rna ? GO:0000049 ... Q6A6N8 36864821
    790645 8cvm:g (2.66) BS01 rna ? GO:0002181 ... Q6A6P1 36864821
    790646 8cvm:i (2.66) BS01 rna ? GO:0003729 ... Q6A6T3 36864821
    790647 8cvm:j (2.66) BS01 rna ? GO:0003735 ... Q6A6N6 36864821
    790648 8cvm:k (2.66) BS01 rna ? GO:0003735 ... Q6A6P5 36864821
    790649 8cvm:k (2.66) BS02 MG ? GO:0003735 ... Q6A6P5 36864821
    790650 8cvm:l (2.66) BS01 rna ? GO:0003735 ... Q6A6N3 36864821
    790651 8cvm:l (2.66) BS02 rna ? GO:0003735 ... Q6A6N3 36864821
    790652 8cvm:m (2.66) BS01 rna ? GO:0003735 ... Q6A6R2 36864821
    790653 8cvm:n (2.66) BS01 rna ? GO:0003735 ... Q6A6P2 36864821
    790654 8cvm:n (2.66) BS02 rna ? GO:0003735 ... Q6A6P2 36864821
    790655 8cvm:o (2.66) BS01 rna ? GO:0003735 ... Q6A7T1 36864821
    790656 8cvm:p (2.66) BS01 rna ? GO:0000027 ... Q6A7V3 36864821
    790657 8cvm:q (2.66) BS01 rna ? GO:0003723 ... Q6A9I3 36864821
    790658 8cvm:r (2.66) BS01 rna ? GO:0003735 ... Q6A6N1 36864821
    790659 8cvm:s (2.66) BS01 rna ? GO:0003735 ... Q6A6M8 36864821
    790660 8cvm:t (2.66) BS01 rna ? GO:0003723 ... Q6A6N7 36864821
    790661 8cvm:u (2.66) BS01 rna ? GO:0003723 ... Q6AAC8 36864821
    790662 8cvm:u (2.66) BS02 rna ? GO:0003723 ... Q6AAC8 36864821
    790663 8cvm:v (2.66) BS01 rna ? GO:0003735 ... Q6A9I2 36864821
    790664 8cvm:v (2.66) BS02 rna ? GO:0003735 ... Q6A9I2 36864821
    790665 8cvm:w (2.66) BS01 rna ? GO:0003735 ... A0A2B7I7B7 36864821
    790666 8cvm:w (2.66) BS02 ZN ? GO:0003735 ... A0A2B7I7B7 36864821
    790667 8cvm:x (2.66) BS01 rna ? GO:0003735 ... Q6A6N4 36864821
    790668 8cvm:y (2.66) BS01 rna ? GO:0003735 ... Q6A6P4 36864821
    790669 8cvm:y (2.66) BS02 rna ? GO:0003735 ... Q6A6P4 36864821
    790670 8cvm:z (2.66) BS01 rna ? GO:0003735 ... A0A2B7I771 36864821
    790671 8cvm:z (2.66) BS02 ZN ? GO:0003735 ... A0A2B7I771 36864821
    790672 8cvn:A (2.4) BS01 NAI 1.1.1.-
    1.1.1.141
    1.1.1.232
    GO:0001822 ... P15428 36774348
    790673 8cvn:A (2.4) BS02 SWL 1.1.1.-
    1.1.1.141
    1.1.1.232
    GO:0001822 ... P15428 36774348
    790674 8cvn:B (2.4) BS01 NAI 1.1.1.-
    1.1.1.141
    1.1.1.232
    GO:0001822 ... P15428 36774348
    790675 8cvn:B (2.4) BS02 SWL 1.1.1.-
    1.1.1.141
    1.1.1.232
    GO:0001822 ... P15428 36774348
    790676 8cvo:E (2.95) BS01 rna ? GO:0003723 ... Q6A6P3 36864821
    790677 8cvo:G (2.95) BS01 rna ? GO:0003676 ... Q6A6N2 36864821
    790678 8cvo:I (2.95) BS01 rna ? GO:0000049 ... Q6A6L4 36864821
    790679 8cvo:J (2.95) BS01 rna ? GO:0003723 ... Q6A6T4 36864821
    790680 8cvo:M (2.95) BS01 rna ? GO:0000049 ... Q6A6M5 36864821
    790681 8cvo:N (2.95) BS01 rna ? GO:0000049 ... Q6A6Q8 36864821
    790682 8cvo:S (2.95) BS01 rna ? GO:0003735 ... Q6A6N9 36864821
    790683 8cvo:S (2.95) BS02 ZN ? GO:0003735 ... Q6A6N9 36864821
    790684 8cvo:U (2.95) BS01 rna ? GO:0000028 ... Q6A6N0 36864821
    790685 8cvp:B (3.4) BS01 ZN ? GO:0005515 ... Q96SW2 36378961
    790686 8cvq:A (1.65) BS01 OYH 3.1.4.- GO:0005634 ... Q9NUW8 37181631
    790687 8cvq:B (1.65) BS01 OYH 3.1.4.- GO:0005634 ... Q9NUW8 37181631
    790688 8cvr:H (2.7) BS01 LDZ 3.4.25.1 GO:0004298 ... P28072 35858375
    790689 8cvr:I (2.7) BS01 LDZ 3.4.25.1 GO:0004298 ... Q99436 35858375
    790690 8cvr:I (2.7) BS02 LDZ 3.4.25.1 GO:0004298 ... Q99436 35858375
    790691 8cvr:J (2.7) BS01 LDZ 3.4.25.1 GO:0000502 ... P49720 35858375
    790692 8cvr:L (2.7) BS01 LDZ 3.4.25.1 GO:0004298 ... P28074 35858375
    790693 8cvr:M (2.7) BS01 LDZ 3.4.25.1 GO:0000502 ... P20618 35858375
    790694 8cvr:V (2.7) BS01 LDZ 3.4.25.1 GO:0004298 ... P28072 35858375
    790695 8cvr:W (2.7) BS01 LDZ 3.4.25.1 GO:0004298 ... Q99436 35858375
    790696 8cvr:W (2.7) BS02 LDZ 3.4.25.1 GO:0004298 ... Q99436 35858375
    790697 8cvr:X (2.7) BS01 LDZ 3.4.25.1 GO:0000502 ... P49720 35858375
    790698 8cvr:Z (2.7) BS01 LDZ 3.4.25.1 GO:0004298 ... P28074 35858375
    790699 8cvr:a (2.7) BS01 LDZ 3.4.25.1 GO:0000502 ... P20618 35858375
    790700 8cvs:H (3.1) BS01 LDZ 3.4.25.1 GO:0004298 ... Q99436 35858375
    790701 8cvs:H (3.1) BS02 LDZ 3.4.25.1 GO:0004298 ... Q99436 35858375
    790702 8cvs:I (3.1) BS01 LDZ 3.4.25.1 GO:0000502 ... P49720 35858375
    790703 8cvs:K (3.1) BS01 LDZ 3.4.25.1 GO:0004298 ... P28074 35858375
    790704 8cvs:L (3.1) BS01 LDZ 3.4.25.1 GO:0000502 ... P20618 35858375
    790705 8cvs:N (3.1) BS01 LDZ 3.4.25.1 GO:0004298 ... P28072 35858375
    790706 8cvs:V (3.1) BS01 LDZ 3.4.25.1 GO:0004298 ... Q99436 35858375
    790707 8cvs:V (3.1) BS02 LDZ 3.4.25.1 GO:0004298 ... Q99436 35858375
    790708 8cvs:W (3.1) BS01 LDZ 3.4.25.1 GO:0000502 ... P49720 35858375
    790709 8cvs:Y (3.1) BS01 LDZ 3.4.25.1 GO:0004298 ... P28074 35858375
    790710 8cvs:Z (3.1) BS01 LDZ 3.4.25.1 GO:0000502 ... P20618 35858375
    790711 8cvs:b (3.1) BS01 LDZ 3.4.25.1 GO:0004298 ... P28072 35858375
    790712 8cvs:c (3.1) BS01 IHP ? GO:0005515 ... Q14997 35858375
    790713 8cvs:c (3.1) BS02 IHP ? GO:0005515 ... Q14997 35858375
    790714 8cvt:A (3.0) BS01 ATP ? GO:0000502 ... P35998 35858375
    790715 8cvt:B (3.0) BS01 ATP ? GO:0000502 ... P62191 35858375
    790716 8cvt:C (3.0) BS01 ATP ? GO:0000502 ... P62195 35858375
    790717 8cvt:D (3.0) BS01 ATP ? GO:0000502 ... P43686 35858375
    790718 8cvt:F (3.0) BS01 ATP ? GO:0000502 ... P17980 35858375
    790719 8cvt:N (3.0) BS01 LDZ 3.4.25.1 GO:0000502 ... P28072 35858375
    790720 8cvt:O (3.0) BS01 LDZ 3.4.25.1 GO:0000502 ... Q99436 35858375
    790721 8cvt:O (3.0) BS02 LDZ 3.4.25.1 GO:0000502 ... Q99436 35858375
    790722 8cvt:P (3.0) BS01 LDZ 3.4.25.1 GO:0000502 ... P49720 35858375
    790723 8cvt:R (3.0) BS01 LDZ 3.4.25.1 GO:0000502 ... P28074 35858375
    790724 8cvt:S (3.0) BS01 LDZ 3.4.25.1 GO:0000502 ... P20618 35858375
    790725 8cvt:c (3.0) BS01 ZN 3.4.19.- GO:0000502 ... O00487 35858375
    790726 8cvt:n (3.0) BS01 LDZ 3.4.25.1 GO:0000502 ... P28072 35858375
    790727 8cvt:o (3.0) BS01 LDZ 3.4.25.1 GO:0000502 ... Q99436 35858375
    790728 8cvt:r (3.0) BS01 LDZ 3.4.25.1 GO:0000502 ... P28074 35858375
    790729 8cvx:A (3.5) BS01 G6P 2.4.1.11 GO:0004373 ... P13807 35793618
    790730 8cvx:B (3.5) BS01 G6P 2.4.1.11 GO:0004373 ... P13807 35793618
    790731 8cvx:C (3.5) BS01 G6P 2.4.1.11 GO:0004373 ... P13807 35793618
    790732 8cvx:D (3.5) BS01 G6P 2.4.1.11 GO:0004373 ... P13807 35793618
    790733 8cw2:A (1.811) BS01 OYR 3.1.4.- GO:0005634 ... Q9NUW8 37181631
    790734 8cw2:B (1.811) BS01 OYR 3.1.4.- GO:0005634 ... Q9NUW8 37181631
    790735 8cw4:1A (3.0) BS01 PGW ? N/A Q46696 36513067
    790736 8cw4:1B (3.0) BS01 PGW ? N/A Q46696 36513067
    790737 8cw4:1B (3.0) BS02 PGW ? N/A Q46696 36513067
    790738 8cw4:1B (3.0) BS03 PGW ? N/A Q46696 36513067
    790739 8cw4:1C (3.0) BS01 PGW ? N/A Q46696 36513067
    790740 8cw4:1C (3.0) BS02 PGW ? N/A Q46696 36513067
    790741 8cw4:1C (3.0) BS03 PGW ? N/A Q46696 36513067
    790742 8cw4:1D (3.0) BS01 PGW ? N/A Q46696 36513067
    790743 8cw4:1D (3.0) BS02 PGW ? N/A Q46696 36513067
    790744 8cw4:1D (3.0) BS03 PGW ? N/A Q46696 36513067
    790745 8cw4:1E (3.0) BS01 PGW ? N/A Q46696 36513067
    790746 8cw4:1E (3.0) BS02 PGW ? N/A Q46696 36513067
    790747 8cw4:1E (3.0) BS03 PGW ? N/A Q46696 36513067
    790748 8cw4:1F (3.0) BS01 PGW ? N/A Q46696 36513067
    790749 8cw4:1F (3.0) BS02 PGW ? N/A Q46696 36513067
    790750 8cw4:1G (3.0) BS01 PGW ? N/A Q46696 36513067
    790751 8cw4:1G (3.0) BS02 PGW ? N/A Q46696 36513067
    790752 8cw4:1G (3.0) BS03 PGW ? N/A Q46696 36513067
    790753 8cw4:1H (3.0) BS01 PGW ? N/A Q46696 36513067
    790754 8cw4:1H (3.0) BS02 PGW ? N/A Q46696 36513067
    790755 8cw4:1H (3.0) BS03 PGW ? N/A Q46696 36513067
    790756 8cw4:1I (3.0) BS01 PGW ? N/A Q46696 36513067
    790757 8cw4:1I (3.0) BS02 PGW ? N/A Q46696 36513067
    790758 8cw4:1I (3.0) BS03 PGW ? N/A Q46696 36513067
    790759 8cw4:1J (3.0) BS01 PGW ? N/A Q46696 36513067
    790760 8cw4:1J (3.0) BS02 PGW ? N/A Q46696 36513067
    790761 8cw4:1K (3.0) BS01 PGW ? N/A Q46696 36513067
    790762 8cw4:1K (3.0) BS02 PGW ? N/A Q46696 36513067
    790763 8cw4:1L (3.0) BS01 PGW ? N/A Q46696 36513067
    790764 8cw4:1L (3.0) BS02 PGW ? N/A Q46696 36513067
    790765 8cw4:1L (3.0) BS03 PGW ? N/A Q46696 36513067
    790766 8cw4:1M (3.0) BS01 PGW ? N/A Q46696 36513067
    790767 8cw4:1M (3.0) BS02 PGW ? N/A Q46696 36513067
    790768 8cw4:1M (3.0) BS03 PGW ? N/A Q46696 36513067
    790769 8cw4:1N (3.0) BS01 PGW ? N/A Q46696 36513067
    790770 8cw4:1N (3.0) BS02 PGW ? N/A Q46696 36513067
    790771 8cw4:2A (3.0) BS01 PGW ? N/A Q46696 36513067
    790772 8cw4:2B (3.0) BS01 PGW ? N/A Q46696 36513067
    790773 8cw4:2B (3.0) BS02 PGW ? N/A Q46696 36513067
    790774 8cw4:2B (3.0) BS03 PGW ? N/A Q46696 36513067
    790775 8cw4:2C (3.0) BS01 PGW ? N/A Q46696 36513067
    790776 8cw4:2C (3.0) BS02 PGW ? N/A Q46696 36513067
    790777 8cw4:2C (3.0) BS03 PGW ? N/A Q46696 36513067
    790778 8cw4:2D (3.0) BS01 PGW ? N/A Q46696 36513067
    790779 8cw4:2D (3.0) BS02 PGW ? N/A Q46696 36513067
    790780 8cw4:2E (3.0) BS01 PGW ? N/A Q46696 36513067
    790781 8cw4:2E (3.0) BS02 PGW ? N/A Q46696 36513067
    790782 8cw4:2F (3.0) BS01 PGW ? N/A Q46696 36513067
    790783 8cw4:2F (3.0) BS02 PGW ? N/A Q46696 36513067
    790784 8cw4:2F (3.0) BS03 PGW ? N/A Q46696 36513067
    790785 8cw4:2G (3.0) BS01 PGW ? N/A Q46696 36513067
    790786 8cw4:2G (3.0) BS02 PGW ? N/A Q46696 36513067
    790787 8cw4:2G (3.0) BS03 PGW ? N/A Q46696 36513067
    790788 8cw4:2H (3.0) BS01 PGW ? N/A Q46696 36513067
    790789 8cw4:2H (3.0) BS02 PGW ? N/A Q46696 36513067
    790790 8cw4:2H (3.0) BS03 PGW ? N/A Q46696 36513067
    790791 8cw4:2I (3.0) BS01 PGW ? N/A Q46696 36513067
    790792 8cw4:2I (3.0) BS02 PGW ? N/A Q46696 36513067
    790793 8cw4:2I (3.0) BS03 PGW ? N/A Q46696 36513067
    790794 8cw4:2J (3.0) BS01 PGW ? N/A Q46696 36513067
    790795 8cw4:2J (3.0) BS02 PGW ? N/A Q46696 36513067
    790796 8cw4:2J (3.0) BS03 PGW ? N/A Q46696 36513067
    790797 8cw4:2K (3.0) BS01 PGW ? N/A Q46696 36513067
    790798 8cw4:2K (3.0) BS02 PGW ? N/A Q46696 36513067
    790799 8cw4:2K (3.0) BS03 PGW ? N/A Q46696 36513067
    790800 8cw4:2L (3.0) BS01 PGW ? N/A Q46696 36513067

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).