SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    791001 8dv8:B (1.7) BS01 TZ3 ? N/A P03372 36517522
    791002 8dvb:A (2.19) BS01 TZI ? N/A P03372 36517522
    791003 8dvb:B (2.19) BS01 TZI ? N/A P03372 36517522
    791004 8dvc:A (2.638) BS01 TZU ? GO:0046872 ... A0A0M5I297 37264151
    791005 8dvc:B (2.638) BS01 TZU ? GO:0046872 ... A0A0M5I297 37264151
    791006 8dvc:C (2.638) BS01 TZU ? GO:0046872 ... A0A0M5I297 37264151
    791007 8dvc:D (2.638) BS01 TZU ? GO:0046872 ... A0A0M5I297 37264151
    791008 8dvc:E (2.638) BS01 TZU ? GO:0046872 ... A0A0M5I297 37264151
    791009 8dvd:H (4.12) BS01 BMA N/A N/A N/A 36344847
    791010 8dvd:H (4.12) BS02 MAN N/A N/A N/A 36344847
    791011 8dvd:L (4.12) BS01 MAN N/A N/A N/A 36344847
    791012 8dve:A (3.84) BS01 CFF ? GO:0003151 ... P11716 37224245
    791013 8dve:A (3.84) BS02 CA ? GO:0003151 ... P11716 37224245
    791014 8dve:A (3.84) BS03 ATP ? GO:0003151 ... P11716 37224245
    791015 8dve:A (3.84) BS04 ZN ? GO:0003151 ... P11716 37224245
    791016 8dve:D (3.84) BS01 CFF ? GO:0003151 ... P11716 37224245
    791017 8dve:D (3.84) BS02 CA ? GO:0003151 ... P11716 37224245
    791018 8dve:D (3.84) BS03 ATP ? GO:0003151 ... P11716 37224245
    791019 8dve:D (3.84) BS04 ZN ? GO:0003151 ... P11716 37224245
    791020 8dve:G (3.84) BS01 CFF ? GO:0003151 ... P11716 37224245
    791021 8dve:G (3.84) BS02 CA ? GO:0003151 ... P11716 37224245
    791022 8dve:G (3.84) BS03 ATP ? GO:0003151 ... P11716 37224245
    791023 8dve:G (3.84) BS04 ZN ? GO:0003151 ... P11716 37224245
    791024 8dve:J (3.84) BS01 CFF ? GO:0003151 ... P11716 37224245
    791025 8dve:J (3.84) BS02 CA ? GO:0003151 ... P11716 37224245
    791026 8dve:J (3.84) BS03 ATP ? GO:0003151 ... P11716 37224245
    791027 8dve:J (3.84) BS04 ZN ? GO:0003151 ... P11716 37224245
    791028 8dvf:A (3.3) BS01 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791029 8dvf:B (3.3) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    791030 8dvf:B (3.3) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791031 8dvf:B (3.3) BS03 MG 3.6.4.- GO:0003677 ... P04530 37474605
    791032 8dvf:B (3.3) BS04 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791033 8dvf:C (3.3) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    791034 8dvf:C (3.3) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791035 8dvf:C (3.3) BS03 MG 3.6.4.- GO:0003677 ... P04530 37474605
    791036 8dvf:C (3.3) BS04 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791037 8dvf:D (3.3) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    791038 8dvf:D (3.3) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791039 8dvf:D (3.3) BS03 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791040 8dvf:E (3.3) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    791041 8dvf:E (3.3) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791042 8dvf:E (3.3) BS03 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791043 8dvf:F (3.3) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    791044 8dvf:F (3.3) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791045 8dvf:H (3.3) BS01 dna 2.7.7.- GO:0003896 ... P04520 37474605
    791046 8dvg:A (2.594) BS01 peptide ? N/A P04439 37604828
    791047 8dvh:A (1.9) BS01 BO2 3.4.21.53 GO:0004176 ... P42425 36232729
    791048 8dvh:B (1.9) BS01 BO2 3.4.21.53 GO:0004176 ... P42425 36232729
    791049 8dvi:A (3.2) BS01 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791050 8dvi:B (3.2) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    791051 8dvi:B (3.2) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791052 8dvi:B (3.2) BS03 MG 3.6.4.- GO:0003677 ... P04530 37474605
    791053 8dvi:B (3.2) BS04 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791054 8dvi:C (3.2) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    791055 8dvi:C (3.2) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791056 8dvi:C (3.2) BS03 MG 3.6.4.- GO:0003677 ... P04530 37474605
    791057 8dvi:C (3.2) BS04 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791058 8dvi:D (3.2) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    791059 8dvi:D (3.2) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791060 8dvi:D (3.2) BS03 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791061 8dvi:E (3.2) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    791062 8dvi:E (3.2) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791063 8dvi:E (3.2) BS03 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791064 8dvi:F (3.2) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    791065 8dvi:F (3.2) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791066 8dvi:H (3.2) BS01 dna 2.7.7.- GO:0003896 ... P04520 37474605
    791067 8dvl:A (2.5) BS01 peptide ? N/A O75581 36893429
    791068 8dvl:A (2.5) BS02 CA ? N/A O75581 36893429
    791069 8dvm:A (2.0) BS01 peptide ? N/A O75581 36893429
    791070 8dvm:A (2.0) BS02 CA ? N/A O75581 36893429
    791071 8dvm:A (2.0) BS03 CA ? N/A O75581 36893429
    791072 8dvn:A (2.53) BS01 CA ? N/A O75581 36893429
    791073 8dvn:A (2.53) BS02 CA ? N/A O75581 36893429
    791074 8dvn:A (2.53) BS03 CA ? N/A O75581 36893429
    791075 8dvn:A (2.53) BS04 CA ? N/A O75581 36893429
    791076 8dvo:A (2.33) BS01 MN ? GO:0003723 ... C6H0Y9 N/A
    791077 8dvo:A (2.33) BS02 MN ? GO:0003723 ... C6H0Y9 N/A
    791078 8dvo:A (2.33) BS03 U0I ? GO:0003723 ... C6H0Y9 N/A
    791079 8dvo:A (2.33) BS04 QQ4 ? GO:0003723 ... C6H0Y9 N/A
    791080 8dvp:A (1.54) BS01 dna 3.2.2.31 GO:0000701 ... P83847 36631987
    791081 8dvp:A (1.54) BS02 dna 3.2.2.31 GO:0000701 ... P83847 36631987
    791082 8dvp:A (1.54) BS03 SF4 3.2.2.31 GO:0000701 ... P83847 36631987
    791083 8dvp:A (1.54) BS04 CA 3.2.2.31 GO:0000701 ... P83847 36631987
    791084 8dvp:A (1.54) BS05 CA 3.2.2.31 GO:0000701 ... P83847 36631987
    791085 8dvp:A (1.54) BS06 CA 3.2.2.31 GO:0000701 ... P83847 36631987
    791086 8dvr:A (3.3) BS01 rna 3.6.4.13 GO:0002230 ... O95786 36272408
    791087 8dvr:A (3.3) BS02 ZN 3.6.4.13 GO:0002230 ... O95786 36272408
    791088 8dvr:A (3.3) BS03 GTP 3.6.4.13 GO:0002230 ... O95786 36272408
    791089 8dvs:A (3.0) BS01 rna 3.6.4.13 GO:0002230 ... O95786 36272408
    791090 8dvs:A (3.0) BS02 ZN 3.6.4.13 GO:0002230 ... O95786 36272408
    791091 8dvs:A (3.0) BS03 ADP 3.6.4.13 GO:0002230 ... O95786 36272408
    791092 8dvu:A (2.9) BS01 rna 3.6.4.13 GO:0002230 ... O95786 36272408
    791093 8dvu:A (2.9) BS02 ZN 3.6.4.13 GO:0002230 ... O95786 36272408
    791094 8dvu:A (2.9) BS03 ADP 3.6.4.13 GO:0002230 ... O95786 36272408
    791095 8dvv:A (3.68) BS01 CA ? GO:0001666 ... E9Q401 N/A
    791096 8dvv:A (3.68) BS02 ZN ? GO:0001666 ... E9Q401 N/A
    791097 8dvv:B (3.68) BS01 CA ? GO:0001666 ... E9Q401 N/A
    791098 8dvv:B (3.68) BS02 ZN ? GO:0001666 ... E9Q401 N/A
    791099 8dvv:C (3.68) BS01 CA ? GO:0001666 ... E9Q401 N/A
    791100 8dvv:C (3.68) BS02 ZN ? GO:0001666 ... E9Q401 N/A
    791101 8dvv:D (3.68) BS01 CA ? GO:0001666 ... E9Q401 N/A
    791102 8dvv:D (3.68) BS02 ZN ? GO:0001666 ... E9Q401 N/A
    791103 8dvw:A (2.29) BS01 UD2 2.4.1.290 GO:0016757 ... A0A0M4SVA9 38019455
    791104 8dvx:A (1.5) BS01 HEC ? GO:0005739 ... P62895 37443314
    791105 8dvx:A (1.5) BS02 FC6 ? GO:0005739 ... P62895 37443314
    791106 8dvx:B (1.5) BS01 HEC ? GO:0005739 ... P62895 37443314
    791107 8dvx:B (1.5) BS02 FC6 ? GO:0005739 ... P62895 37443314
    791108 8dvx:B (1.5) BS03 FC6 ? GO:0005739 ... P62895 37443314
    791109 8dvx:C (1.5) BS01 FC6 ? GO:0005739 ... P62895 37443314
    791110 8dvx:C (1.5) BS02 HEC ? GO:0005739 ... P62895 37443314
    791111 8dvx:C (1.5) BS03 FC6 ? GO:0005739 ... P62895 37443314
    791112 8dvx:D (1.5) BS01 FC6 ? GO:0005739 ... P62895 37443314
    791113 8dvx:D (1.5) BS02 HEC ? GO:0005739 ... P62895 37443314
    791114 8dvy:A (2.36) BS01 dna 3.2.2.31 GO:0000701 ... P83847 36631987
    791115 8dvy:A (2.36) BS02 dna 3.2.2.31 GO:0000701 ... P83847 36631987
    791116 8dvy:A (2.36) BS03 SF4 3.2.2.31 GO:0000701 ... P83847 36631987
    791117 8dvy:A (2.36) BS04 CA 3.2.2.31 GO:0000701 ... P83847 36631987
    791118 8dvy:A (2.36) BS05 CA 3.2.2.31 GO:0000701 ... P83847 36631987
    791119 8dvy:A (2.36) BS06 CA 3.2.2.31 GO:0000701 ... P83847 36631987
    791120 8dvz:A (2.27) BS01 UD2 2.4.1.290 GO:0016757 ... A0A0M4SVA9 38019455
    791121 8dw0:A (1.68) BS01 dna 3.2.2.31 GO:0000701 ... P83847 36631987
    791122 8dw0:A (1.68) BS02 dna 3.2.2.31 GO:0000701 ... P83847 36631987
    791123 8dw0:A (1.68) BS03 SF4 3.2.2.31 GO:0000701 ... P83847 36631987
    791124 8dw1:A (1.849) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 36516684
    791125 8dw1:A (1.849) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 36516684
    791126 8dw4:A (2.49) BS01 dna 3.2.2.31 GO:0000701 ... P83847 36631987
    791127 8dw4:A (2.49) BS02 dna 3.2.2.31 GO:0000701 ... P83847 36631987
    791128 8dw4:A (2.49) BS03 SF4 3.2.2.31 GO:0000701 ... P83847 36631987
    791129 8dw5:A (1.52) BS01 FQ7 ? GO:0001523 ... P02766 36364032
    791130 8dw6:A (3.5) BS01 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791131 8dw6:B (3.5) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    791132 8dw6:B (3.5) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791133 8dw6:B (3.5) BS03 MG 3.6.4.- GO:0003677 ... P04530 37474605
    791134 8dw6:B (3.5) BS04 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791135 8dw6:C (3.5) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    791136 8dw6:C (3.5) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791137 8dw6:C (3.5) BS03 MG 3.6.4.- GO:0003677 ... P04530 37474605
    791138 8dw6:C (3.5) BS04 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791139 8dw6:D (3.5) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    791140 8dw6:D (3.5) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791141 8dw6:D (3.5) BS03 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791142 8dw6:E (3.5) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    791143 8dw6:E (3.5) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791144 8dw6:E (3.5) BS03 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791145 8dw6:F (3.5) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    791146 8dw6:F (3.5) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    791147 8dw6:H (3.5) BS01 dna 2.7.7.- GO:0003896 ... P04520 37474605
    791148 8dw6:H (3.5) BS02 ZN 2.7.7.- GO:0003896 ... P04520 37474605
    791149 8dw7:A (1.96) BS01 dna 3.2.2.31 GO:0000701 ... P83847 36631987
    791150 8dw7:A (1.96) BS02 dna 3.2.2.31 GO:0000701 ... P83847 36631987
    791151 8dw7:A (1.96) BS03 SF4 3.2.2.31 GO:0000701 ... P83847 36631987
    791152 8dw7:A (1.96) BS04 CA 3.2.2.31 GO:0000701 ... P83847 36631987
    791153 8dw7:D (1.96) BS01 dna 3.2.2.31 GO:0000701 ... P83847 36631987
    791154 8dw7:D (1.96) BS02 dna 3.2.2.31 GO:0000701 ... P83847 36631987
    791155 8dw7:D (1.96) BS03 SF4 3.2.2.31 GO:0000701 ... P83847 36631987
    791156 8dw7:D (1.96) BS04 CA 3.2.2.31 GO:0000701 ... P83847 36631987
    791157 8dw8:A (2.58) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 36516684
    791158 8dw8:A (2.58) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 36516684
    791159 8dwb:AAA (1.602) BS01 SIA 3.2.1.18 GO:0004308 ... Q8AZ87 36640354
    791160 8dwb:AAA (1.602) BS02 CA 3.2.1.18 GO:0004308 ... Q8AZ87 36640354
    791161 8dwc:R (2.87) BS01 peptide ? GO:0004888 ... Q96LB2 36302898
    791162 8dwd:A (1.68) BS01 dna 3.2.2.31 GO:0000701 ... P83847 N/A
    791163 8dwd:A (1.68) BS02 dna 3.2.2.31 GO:0000701 ... P83847 N/A
    791164 8dwd:A (1.68) BS03 SF4 3.2.2.31 GO:0000701 ... P83847 N/A
    791165 8dwd:A (1.68) BS04 CA 3.2.2.31 GO:0000701 ... P83847 N/A
    791166 8dwd:A (1.68) BS05 CA 3.2.2.31 GO:0000701 ... P83847 N/A
    791167 8dwe:A (2.2) BS01 dna 3.2.2.31 GO:0000701 ... P83847 N/A
    791168 8dwe:A (2.2) BS02 dna 3.2.2.31 GO:0000701 ... P83847 N/A
    791169 8dwe:A (2.2) BS03 SF4 3.2.2.31 GO:0000701 ... P83847 N/A
    791170 8dwe:A (2.2) BS04 CA 3.2.2.31 GO:0000701 ... P83847 N/A
    791171 8dwe:A (2.2) BS05 CA 3.2.2.31 GO:0000701 ... P83847 N/A
    791172 8dwe:D (2.2) BS01 dna 3.2.2.31 GO:0000701 ... P83847 N/A
    791173 8dwe:D (2.2) BS02 dna 3.2.2.31 GO:0000701 ... P83847 N/A
    791174 8dwe:D (2.2) BS03 SF4 3.2.2.31 GO:0000701 ... P83847 N/A
    791175 8dwe:D (2.2) BS04 CA 3.2.2.31 GO:0000701 ... P83847 N/A
    791176 8dwe:D (2.2) BS05 CA 3.2.2.31 GO:0000701 ... P83847 N/A
    791177 8dwf:A (2.6) BS01 dna 3.2.2.31 GO:0000701 ... P83847 N/A
    791178 8dwf:A (2.6) BS02 dna 3.2.2.31 GO:0000701 ... P83847 N/A
    791179 8dwf:A (2.6) BS03 SF4 3.2.2.31 GO:0000701 ... P83847 N/A
    791180 8dwf:A (2.6) BS04 CA 3.2.2.31 GO:0000701 ... P83847 N/A
    791181 8dwf:A (2.6) BS05 CA 3.2.2.31 GO:0000701 ... P83847 N/A
    791182 8dwf:D (2.6) BS01 dna 3.2.2.31 GO:0000701 ... P83847 N/A
    791183 8dwf:D (2.6) BS02 dna 3.2.2.31 GO:0000701 ... P83847 N/A
    791184 8dwf:D (2.6) BS03 SF4 3.2.2.31 GO:0000701 ... P83847 N/A
    791185 8dwf:D (2.6) BS04 CA 3.2.2.31 GO:0000701 ... P83847 N/A
    791186 8dwf:D (2.6) BS05 CA 3.2.2.31 GO:0000701 ... P83847 N/A
    791187 8dwg:R (2.71) BS01 peptide ? GO:0004888 ... Q96LB2 36302898
    791188 8dwg:R (2.71) BS02 U39 ? GO:0004888 ... Q96LB2 36302898
    791189 8dwh:R (3.25) BS01 U2U ? GO:0004888 ... Q96LB2 36302898
    791190 8dwj:A (3.9) BS01 rna 2.7.7.- GO:0003896 ... P04520 37474605
    791191 8dwj:A (3.9) BS02 dna 2.7.7.- GO:0003896 ... P04520 37474605
    791192 8dwj:A (3.9) BS03 ZN 2.7.7.- GO:0003896 ... P04520 37474605
    791193 8dwk:A (2.5) BS01 peptide 3.1.3.16 GO:0016787 ... P62136 37002212
    791194 8dwk:A (2.5) BS02 MN 3.1.3.16 GO:0016787 ... P62136 37002212
    791195 8dwk:A (2.5) BS03 MN 3.1.3.16 GO:0016787 ... P62136 37002212
    791196 8dwk:B (2.5) BS01 peptide 3.1.3.16 GO:0016787 ... P62136 37002212
    791197 8dwk:B (2.5) BS02 MN 3.1.3.16 GO:0016787 ... P62136 37002212
    791198 8dwk:B (2.5) BS03 MN 3.1.3.16 GO:0016787 ... P62136 37002212
    791199 8dwl:A (2.0) BS01 ZN 3.1.3.16 GO:0016787 ... P62136 37002212
    791200 8dwl:A (2.0) BS02 ZN 3.1.3.16 GO:0016787 ... P62136 37002212

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).