SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3948 3949 3950 3951 3952 3953 3954 3955 3956 3957 3958 3959 3960 3961 3962 3963 3964 3965 3966 3967 3968 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    791401 8d1k:A (2.28) BS01 CA ? GO:0005229 ... O76090 35789156
    791402 8d1k:B (2.28) BS01 CA ? GO:0005229 ... O76090 35789156
    791403 8d1k:C (2.28) BS01 CA ? GO:0005229 ... O76090 35789156
    791404 8d1k:D (2.28) BS01 CA ? GO:0005229 ... O76090 35789156
    791405 8d1k:E (2.28) BS01 CA ? GO:0005229 ... O76090 35789156
    791406 8d1l:A (2.12) BS01 CA ? GO:0005229 ... O76090 35789156
    791407 8d1l:B (2.12) BS01 CA ? GO:0005229 ... O76090 35789156
    791408 8d1l:C (2.12) BS01 CA ? GO:0005229 ... O76090 35789156
    791409 8d1l:D (2.12) BS01 CA ? GO:0005229 ... O76090 35789156
    791410 8d1l:E (2.12) BS01 CA ? GO:0005229 ... O76090 35789156
    791411 8d1n:A (1.93) BS01 CA ? GO:0005254 ... E1BF86 35789156
    791412 8d1n:A (1.93) BS02 DU0 ? GO:0005254 ... E1BF86 35789156
    791413 8d1n:B (1.93) BS01 CA ? GO:0005254 ... E1BF86 35789156
    791414 8d1n:B (1.93) BS02 DU0 ? GO:0005254 ... E1BF86 35789156
    791415 8d1n:C (1.93) BS01 CA ? GO:0005254 ... E1BF86 35789156
    791416 8d1n:C (1.93) BS02 DU0 ? GO:0005254 ... E1BF86 35789156
    791417 8d1n:D (1.93) BS01 CA ? GO:0005254 ... E1BF86 35789156
    791418 8d1n:D (1.93) BS02 DU0 ? GO:0005254 ... E1BF86 35789156
    791419 8d1n:E (1.93) BS01 CA ? GO:0005254 ... E1BF86 35789156
    791420 8d1n:E (1.93) BS02 DU0 ? GO:0005254 ... E1BF86 35789156
    791421 8d1o:A (2.44) BS01 CA ? GO:0005254 ... O76090 35789156
    791422 8d1o:B (2.44) BS01 CA ? GO:0005254 ... O76090 35789156
    791423 8d1o:C (2.44) BS01 CA ? GO:0005254 ... O76090 35789156
    791424 8d1o:D (2.44) BS01 CA ? GO:0005254 ... O76090 35789156
    791425 8d1o:E (2.44) BS01 CA ? GO:0005254 ... O76090 35789156
    791426 8d1p:A (1.88) BS01 H5V ? GO:0005524 ... W4J0F1 36275624
    791427 8d1q:A (2.15) BS01 3BH ? GO:0005524 ... W4J0F1 36275624
    791428 8d1r:A (2.19) BS01 PVF 2.3.1.- GO:0005576 ... P9WFK7 36037791
    791429 8d1s:A (2.25) BS01 TO1 ? GO:0005524 ... W4J0F1 36275624
    791430 8d1t:A (2.94) BS01 PXW 3.4.19.12 GO:0004843 ... Q70CQ3 N/A
    791431 8d1t:A (2.94) BS02 ZN 3.4.19.12 GO:0004843 ... Q70CQ3 N/A
    791432 8d1u:A (1.302) BS01 UT7 2.3.1.180 GO:0004315 ... P0A6R0 36862094
    791433 8d1v:A (2.82) BS01 rna ? N/A A0A401FT36 36190192
    791434 8d1v:A (2.82) BS02 rna ? N/A A0A401FT36 36190192
    791435 8d1v:A (2.82) BS03 ZN ? N/A A0A401FT36 36190192
    791436 8d1v:A (2.82) BS04 ZN ? N/A A0A401FT36 36190192
    791437 8d1v:A (2.82) BS05 ZN ? N/A A0A401FT36 36190192
    791438 8d1v:A (2.82) BS06 ZN ? N/A A0A401FT36 36190192
    791439 8d1w:A (2.1) BS01 HFY ? GO:0005524 ... W4J0F1 N/A
    791440 8d1x:A (2.8) BS01 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... B4RJ22 N/A
    791441 8d1x:B (2.8) BS01 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... B4RJ22 N/A
    791442 8d1x:C (2.8) BS01 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... B4RJ22 N/A
    791443 8d1x:D (2.8) BS01 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... B4RJ22 N/A
    791444 8d1x:E (2.8) BS01 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... B4RJ22 N/A
    791445 8d1x:F (2.8) BS01 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... B4RJ22 N/A
    791446 8d1y:A (1.9) BS01 Q3V ? GO:0005524 ... W4J0F1 36275624
    791447 8d20:A (1.95) BS01 MTA ? GO:0005524 ... W4J0F1 36275624
    791448 8d22:A (2.0) BS01 Q8L ? GO:0005524 ... W4J0F1 36275624
    791449 8d23:A (2.14) BS01 PVU 2.3.1.- GO:0005576 ... P9WFK7 36037791
    791450 8d24:A (1.75) BS01 3FD ? GO:0005524 ... W4J0F1 36275624
    791451 8d25:A (2.05) BS01 PV3 2.3.1.- GO:0005576 ... P9WFK7 36037791
    791452 8d29:A (1.81) BS01 rna N/A N/A N/A 36413497
    791453 8d29:B (1.81) BS01 rna N/A N/A N/A 36413497
    791454 8d29:D (1.81) BS01 rna N/A N/A N/A 36413497
    791455 8d29:E (1.81) BS01 rna N/A N/A N/A 36413497
    791456 8d29:G (1.81) BS01 rna N/A N/A N/A 36413497
    791457 8d29:H (1.81) BS01 rna N/A N/A N/A 36413497
    791458 8d29:H (1.81) BS02 rna N/A N/A N/A 36413497
    791459 8d29:I (1.81) BS01 rna N/A N/A N/A 36413497
    791460 8d29:L (1.81) BS01 rna N/A N/A N/A 36413497
    791461 8d29:L (1.81) BS02 rna N/A N/A N/A 36413497
    791462 8d2k:A (2.43) BS01 rna ? GO:0003676 ... A0LWB3 38348449
    791463 8d2k:A (2.43) BS02 dna ? GO:0003676 ... A0LWB3 38348449
    791464 8d2k:A (2.43) BS03 dna ? GO:0003676 ... A0LWB3 38348449
    791465 8d2k:A (2.43) BS04 dna ? GO:0003676 ... A0LWB3 38348449
    791466 8d2k:A (2.43) BS05 MG ? GO:0003676 ... A0LWB3 38348449
    791467 8d2k:A (2.43) BS06 MG ? GO:0003676 ... A0LWB3 38348449
    791468 8d2k:A (2.43) BS07 MG ? GO:0003676 ... A0LWB3 38348449
    791469 8d2k:A (2.43) BS08 MG ? GO:0003676 ... A0LWB3 38348449
    791470 8d2k:A (2.43) BS09 MG ? GO:0003676 ... A0LWB3 38348449
    791471 8d2l:A (2.21) BS01 rna ? GO:0003676 ... A0LWB3 38348449
    791472 8d2l:A (2.21) BS02 dna ? GO:0003676 ... A0LWB3 38348449
    791473 8d2l:A (2.21) BS03 dna ? GO:0003676 ... A0LWB3 38348449
    791474 8d2l:A (2.21) BS04 dna ? GO:0003676 ... A0LWB3 38348449
    791475 8d2l:A (2.21) BS05 MG ? GO:0003676 ... A0LWB3 38348449
    791476 8d2l:A (2.21) BS06 MG ? GO:0003676 ... A0LWB3 38348449
    791477 8d2l:A (2.21) BS07 MG ? GO:0003676 ... A0LWB3 38348449
    791478 8d2l:A (2.21) BS08 MG ? GO:0003676 ... A0LWB3 38348449
    791479 8d2l:A (2.21) BS09 MG ? GO:0003676 ... A0LWB3 38348449
    791480 8d2l:A (2.21) BS10 MG ? GO:0003676 ... A0LWB3 38348449
    791481 8d2m:A (1.821) BS01 dna 3.4.-.-
    4.-.-.-
    GO:0003697 ... P76318 35934051
    791482 8d2m:B (1.821) BS01 dna 3.4.-.-
    4.-.-.-
    GO:0003697 ... P76318 35934051
    791483 8d2n:A (2.88) BS01 rna ? GO:0003676 ... A0LWB3 38348449
    791484 8d2n:A (2.88) BS02 dna ? GO:0003676 ... A0LWB3 38348449
    791485 8d2n:A (2.88) BS03 dna ? GO:0003676 ... A0LWB3 38348449
    791486 8d2n:A (2.88) BS04 MG ? GO:0003676 ... A0LWB3 38348449
    791487 8d2o:A (2.66) BS01 rna ? GO:0003676 ... A0LWB3 38348449
    791488 8d2o:A (2.66) BS02 dna ? GO:0003676 ... A0LWB3 38348449
    791489 8d2o:A (2.66) BS03 dna ? GO:0003676 ... A0LWB3 38348449
    791490 8d2o:A (2.66) BS04 dna ? GO:0003676 ... A0LWB3 38348449
    791491 8d2o:A (2.66) BS05 MG ? GO:0003676 ... A0LWB3 38348449
    791492 8d2p:A (2.78) BS01 rna ? GO:0003676 ... A0LWB3 38348449
    791493 8d2p:A (2.78) BS02 dna ? GO:0003676 ... A0LWB3 38348449
    791494 8d2p:A (2.78) BS03 MG ? GO:0003676 ... A0LWB3 38348449
    791495 8d2p:A (2.78) BS04 MG ? GO:0003676 ... A0LWB3 38348449
    791496 8d2p:A (2.78) BS05 MG ? GO:0003676 ... A0LWB3 38348449
    791497 8d2p:A (2.78) BS06 MG ? GO:0003676 ... A0LWB3 38348449
    791498 8d2q:A (2.58) BS01 rna ? GO:0003676 ... A0LWB3 38348449
    791499 8d2q:A (2.58) BS02 dna ? GO:0003676 ... A0LWB3 38348449
    791500 8d2q:A (2.58) BS03 dna ? GO:0003676 ... A0LWB3 38348449
    791501 8d2q:A (2.58) BS04 dna ? GO:0003676 ... A0LWB3 38348449
    791502 8d2q:A (2.58) BS05 MG ? GO:0003676 ... A0LWB3 38348449
    791503 8d2s:A (2.9) BS01 ZGS ? GO:0005789 ... Q6DEJ6 37156797
    791504 8d2s:A (2.9) BS02 ZGS ? GO:0005789 ... Q6DEJ6 37156797
    791505 8d2s:A (2.9) BS03 ZGS ? GO:0005789 ... Q6DEJ6 37156797
    791506 8d2u:A (3.3) BS01 ZGS ? GO:0005789 ... Q6DEJ6 37156797
    791507 8d2v:A (4.1) BS01 ZGS ? GO:0005789 ... Q6DEJ6 37156797
    791508 8d2w:A (3.4) BS01 ZGS ? GO:0005789 ... Q6DEJ6 37156797
    791509 8d2x:A (3.4) BS01 ZGS ? GO:0005789 ... Q6DEJ6 37156797
    791510 8d2y:A (1.22) BS01 EPE 4.1.1.116 GO:0003824 ... Q8ZNC4 36265649
    791511 8d2z:A (1.85) BS01 ZN 3.5.2.6 GO:0008800 ... B4EIY5 N/A
    791512 8d2z:B (1.85) BS01 ZN 3.5.2.6 GO:0008800 ... B4EIY5 N/A
    791513 8d32:A (1.85) BS01 SF0 2.5.1.17 GO:0005737 ... P9WP99 39012171
    791514 8d32:A (1.85) BS02 3PO 2.5.1.17 GO:0005737 ... P9WP99 39012171
    791515 8d33:A (2.46) BS01 dna 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    791516 8d33:A (2.46) BS02 dna 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    791517 8d33:A (2.46) BS03 CA 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    791518 8d33:A (2.46) BS04 DCP 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    791519 8d35:A () BS01 peptide 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A N/A N/A
    791520 8d36:H (1.45) BS01 peptide N/A N/A N/A 35857439
    791521 8d36:L (1.45) BS01 peptide N/A N/A N/A 35857439
    791522 8d37:A (2.65) BS01 dna 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    791523 8d37:A (2.65) BS02 dna 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    791524 8d37:A (2.65) BS03 CA 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    791525 8d37:A (2.65) BS04 DCP 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    791526 8d39:A (1.268) BS01 QDB ? GO:0004497 ... Q2IU02 36043399
    791527 8d39:A (1.268) BS02 HEM ? GO:0004497 ... Q2IU02 36043399
    791528 8d3a:H (2.9) BS01 BMA N/A N/A N/A 36225920
    791529 8d3a:H (2.9) BS02 MAN N/A N/A N/A 36225920
    791530 8d3a:H (2.9) BS03 MAN N/A N/A N/A 36225920
    791531 8d3c:A (3.1) BS01 CA ? N/A P04275 35776905
    791532 8d3c:A (3.1) BS02 CA ? N/A P04275 35776905
    791533 8d3c:A (3.1) BS03 CA ? N/A P04275 35776905
    791534 8d3c:B (3.1) BS01 CA ? N/A P04275 35776905
    791535 8d3c:B (3.1) BS02 CA ? N/A P04275 35776905
    791536 8d3c:B (3.1) BS03 CA ? N/A P04275 35776905
    791537 8d3c:C (3.1) BS01 CA ? N/A P04275 35776905
    791538 8d3c:C (3.1) BS02 CA ? N/A P04275 35776905
    791539 8d3c:C (3.1) BS03 CA ? N/A P04275 35776905
    791540 8d3c:D (3.1) BS01 CA ? N/A P04275 35776905
    791541 8d3c:D (3.1) BS02 CA ? N/A P04275 35776905
    791542 8d3c:D (3.1) BS03 CA ? N/A P04275 35776905
    791543 8d3c:E (3.1) BS01 CA ? N/A P04275 35776905
    791544 8d3c:E (3.1) BS02 CA ? N/A P04275 35776905
    791545 8d3c:E (3.1) BS03 CA ? N/A P04275 35776905
    791546 8d3c:F (3.1) BS01 CA ? N/A P04275 35776905
    791547 8d3c:F (3.1) BS02 CA ? N/A P04275 35776905
    791548 8d3c:F (3.1) BS03 CA ? N/A P04275 35776905
    791549 8d3c:G (3.1) BS01 CA ? N/A P04275 35776905
    791550 8d3c:G (3.1) BS02 CA ? N/A P04275 35776905
    791551 8d3c:G (3.1) BS03 CA ? N/A P04275 35776905
    791552 8d3c:H (3.1) BS01 CA ? N/A P04275 35776905
    791553 8d3c:H (3.1) BS02 CA ? N/A P04275 35776905
    791554 8d3c:H (3.1) BS03 CA ? N/A P04275 35776905
    791555 8d3c:I (3.1) BS01 CA ? N/A P04275 35776905
    791556 8d3c:I (3.1) BS02 CA ? N/A P04275 35776905
    791557 8d3c:I (3.1) BS03 CA ? N/A P04275 35776905
    791558 8d3c:J (3.1) BS01 CA ? N/A P04275 35776905
    791559 8d3c:J (3.1) BS02 CA ? N/A P04275 35776905
    791560 8d3c:J (3.1) BS03 CA ? N/A P04275 35776905
    791561 8d3c:K (3.1) BS01 CA ? N/A P04275 35776905
    791562 8d3c:K (3.1) BS02 CA ? N/A P04275 35776905
    791563 8d3c:K (3.1) BS03 CA ? N/A P04275 35776905
    791564 8d3c:L (3.1) BS01 CA ? N/A P04275 35776905
    791565 8d3c:L (3.1) BS02 CA ? N/A P04275 35776905
    791566 8d3c:L (3.1) BS03 CA ? N/A P04275 35776905
    791567 8d3c:M (3.1) BS01 CA ? N/A P04275 35776905
    791568 8d3c:M (3.1) BS02 CA ? N/A P04275 35776905
    791569 8d3c:M (3.1) BS03 CA ? N/A P04275 35776905
    791570 8d3c:N (3.1) BS01 CA ? N/A P04275 35776905
    791571 8d3c:N (3.1) BS02 CA ? N/A P04275 35776905
    791572 8d3c:N (3.1) BS03 CA ? N/A P04275 35776905
    791573 8d3c:O (3.1) BS01 CA ? N/A P04275 35776905
    791574 8d3c:O (3.1) BS02 CA ? N/A P04275 35776905
    791575 8d3c:O (3.1) BS03 CA ? N/A P04275 35776905
    791576 8d3c:P (3.1) BS01 CA ? N/A P04275 35776905
    791577 8d3c:P (3.1) BS02 CA ? N/A P04275 35776905
    791578 8d3c:P (3.1) BS03 CA ? N/A P04275 35776905
    791579 8d3d:A (3.2) BS01 CA ? N/A P04275 35776905
    791580 8d3d:A (3.2) BS02 CA ? N/A P04275 35776905
    791581 8d3d:A (3.2) BS03 CA ? N/A P04275 35776905
    791582 8d3d:B (3.2) BS01 CA ? N/A P04275 35776905
    791583 8d3d:B (3.2) BS02 CA ? N/A P04275 35776905
    791584 8d3d:B (3.2) BS03 CA ? N/A P04275 35776905
    791585 8d3d:C (3.2) BS01 CA ? N/A P04275 35776905
    791586 8d3d:C (3.2) BS02 CA ? N/A P04275 35776905
    791587 8d3d:C (3.2) BS03 CA ? N/A P04275 35776905
    791588 8d3d:D (3.2) BS01 CA ? N/A P04275 35776905
    791589 8d3d:D (3.2) BS02 CA ? N/A P04275 35776905
    791590 8d3d:D (3.2) BS03 CA ? N/A P04275 35776905
    791591 8d3d:E (3.2) BS01 CA ? N/A P04275 35776905
    791592 8d3d:E (3.2) BS02 CA ? N/A P04275 35776905
    791593 8d3d:E (3.2) BS03 CA ? N/A P04275 35776905
    791594 8d3d:F (3.2) BS01 CA ? N/A P04275 35776905
    791595 8d3d:F (3.2) BS02 CA ? N/A P04275 35776905
    791596 8d3d:F (3.2) BS03 CA ? N/A P04275 35776905
    791597 8d3d:G (3.2) BS01 CA ? N/A P04275 35776905
    791598 8d3d:G (3.2) BS02 CA ? N/A P04275 35776905
    791599 8d3d:G (3.2) BS03 CA ? N/A P04275 35776905
    791600 8d3d:H (3.2) BS01 CA ? N/A P04275 35776905

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).