SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3949 3950 3951 3952 3953 3954 3955 3956 3957 3958 3959 3960 3961 3962 3963 3964 3965 3966 3967 3968 3969 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    791601 8d3d:H (3.2) BS02 CA ? N/A P04275 35776905
    791602 8d3d:H (3.2) BS03 CA ? N/A P04275 35776905
    791603 8d3d:I (3.2) BS01 CA ? N/A P04275 35776905
    791604 8d3d:I (3.2) BS02 CA ? N/A P04275 35776905
    791605 8d3d:I (3.2) BS03 CA ? N/A P04275 35776905
    791606 8d3d:J (3.2) BS01 CA ? N/A P04275 35776905
    791607 8d3d:J (3.2) BS02 CA ? N/A P04275 35776905
    791608 8d3d:J (3.2) BS03 CA ? N/A P04275 35776905
    791609 8d3d:K (3.2) BS01 CA ? N/A P04275 35776905
    791610 8d3d:K (3.2) BS02 CA ? N/A P04275 35776905
    791611 8d3d:K (3.2) BS03 CA ? N/A P04275 35776905
    791612 8d3d:L (3.2) BS01 CA ? N/A P04275 35776905
    791613 8d3d:L (3.2) BS02 CA ? N/A P04275 35776905
    791614 8d3d:L (3.2) BS03 CA ? N/A P04275 35776905
    791615 8d3d:M (3.2) BS01 CA ? N/A P04275 35776905
    791616 8d3d:M (3.2) BS02 CA ? N/A P04275 35776905
    791617 8d3d:M (3.2) BS03 CA ? N/A P04275 35776905
    791618 8d3d:N (3.2) BS01 CA ? N/A P04275 35776905
    791619 8d3d:N (3.2) BS02 CA ? N/A P04275 35776905
    791620 8d3d:N (3.2) BS03 CA ? N/A P04275 35776905
    791621 8d3d:O (3.2) BS01 CA ? N/A P04275 35776905
    791622 8d3d:O (3.2) BS02 CA ? N/A P04275 35776905
    791623 8d3d:O (3.2) BS03 CA ? N/A P04275 35776905
    791624 8d3d:P (3.2) BS01 CA ? N/A P04275 35776905
    791625 8d3d:P (3.2) BS02 CA ? N/A P04275 35776905
    791626 8d3d:P (3.2) BS03 CA ? N/A P04275 35776905
    791627 8d3e:A (2.38) BS01 FAD 1.6.99.- GO:0016491 ... O95831 38671223
    791628 8d3e:A (2.38) BS02 QDI 1.6.99.- GO:0016491 ... O95831 38671223
    791629 8d3e:B (2.38) BS01 FAD 1.6.99.- GO:0016491 ... O95831 38671223
    791630 8d3g:A (2.58) BS01 FAD 1.6.99.- GO:0016491 ... O95831 38671223
    791631 8d3g:A (2.58) BS02 QD1 1.6.99.- GO:0016491 ... O95831 38671223
    791632 8d3g:B (2.58) BS01 FAD 1.6.99.- GO:0016491 ... O95831 38671223
    791633 8d3g:B (2.58) BS02 QD1 1.6.99.- GO:0016491 ... O95831 38671223
    791634 8d3h:A (2.51) BS01 FAD 1.6.99.- GO:0016491 ... O95831 38671223
    791635 8d3h:A (2.51) BS02 QBC 1.6.99.- GO:0016491 ... O95831 38671223
    791636 8d3h:B (2.51) BS01 FAD 1.6.99.- GO:0016491 ... O95831 38671223
    791637 8d3h:B (2.51) BS02 QBC 1.6.99.- GO:0016491 ... O95831 38671223
    791638 8d3i:A (2.65) BS01 1LM 1.6.99.- GO:0016491 ... O95831 38671223
    791639 8d3i:A (2.65) BS02 FAD 1.6.99.- GO:0016491 ... O95831 38671223
    791640 8d3i:B (2.65) BS01 1LM 1.6.99.- GO:0016491 ... O95831 38671223
    791641 8d3i:B (2.65) BS02 FAD 1.6.99.- GO:0016491 ... O95831 38671223
    791642 8d3j:A (2.4) BS01 FAD 1.6.99.- GO:0016491 ... O95831 38671223
    791643 8d3j:A (2.4) BS02 QEF 1.6.99.- GO:0016491 ... O95831 38671223
    791644 8d3j:B (2.4) BS01 FAD 1.6.99.- GO:0016491 ... O95831 38671223
    791645 8d3j:B (2.4) BS02 QEF 1.6.99.- GO:0016491 ... O95831 38671223
    791646 8d3k:A (2.3) BS01 QC6 1.6.99.- GO:0016491 ... O95831 38671223
    791647 8d3k:A (2.3) BS02 FAD 1.6.99.- GO:0016491 ... O95831 38671223
    791648 8d3k:B (2.3) BS01 QC6 1.6.99.- GO:0016491 ... O95831 38671223
    791649 8d3k:B (2.3) BS02 FAD 1.6.99.- GO:0016491 ... O95831 38671223
    791650 8d3l:A (3.49) BS01 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791651 8d3l:A (3.49) BS02 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791652 8d3l:B (3.49) BS01 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791653 8d3l:C (3.49) BS01 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791654 8d3l:D (3.49) BS01 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791655 8d3l:E (3.49) BS01 dna 3.1.-.- GO:0000287 ... Q9KFX8 36272411
    791656 8d3l:F (3.49) BS01 dna 3.1.-.- GO:0000287 ... Q9KFX8 36272411
    791657 8d3l:I (3.49) BS01 dna 3.1.12.1 N/A N/A 36272411
    791658 8d3l:I (3.49) BS02 SF4 3.1.12.1 N/A N/A 36272411
    791659 8d3l:I (3.49) BS03 MN 3.1.12.1 N/A N/A 36272411
    791660 8d3l:J (3.49) BS01 dna 3.1.12.1 N/A N/A 36272411
    791661 8d3l:J (3.49) BS02 SF4 3.1.12.1 N/A N/A 36272411
    791662 8d3l:J (3.49) BS03 MN 3.1.12.1 N/A N/A 36272411
    791663 8d3m:A (3.41) BS01 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791664 8d3m:A (3.41) BS02 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791665 8d3m:B (3.41) BS01 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791666 8d3m:C (3.41) BS01 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791667 8d3m:C (3.41) BS02 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791668 8d3m:E (3.41) BS01 dna 3.1.-.- GO:0000287 ... Q9KFX8 36272411
    791669 8d3m:F (3.41) BS01 dna 3.1.-.- GO:0000287 ... Q9KFX8 36272411
    791670 8d3m:I (3.41) BS01 dna 3.1.12.1 N/A N/A 36272411
    791671 8d3m:I (3.41) BS02 MN 3.1.12.1 N/A N/A 36272411
    791672 8d3m:I (3.41) BS03 SF4 3.1.12.1 N/A N/A 36272411
    791673 8d3n:A (2.25) BS01 QBC 1.6.99.- GO:0016491 ... O95831 38671223
    791674 8d3n:A (2.25) BS02 FAD 1.6.99.- GO:0016491 ... O95831 38671223
    791675 8d3n:B (2.25) BS01 QBC 1.6.99.- GO:0016491 ... O95831 38671223
    791676 8d3n:B (2.25) BS02 FAD 1.6.99.- GO:0016491 ... O95831 38671223
    791677 8d3o:A (2.25) BS01 QF6 1.6.99.- GO:0016491 ... O95831 38671223
    791678 8d3o:A (2.25) BS02 FAD 1.6.99.- GO:0016491 ... O95831 38671223
    791679 8d3o:B (2.25) BS01 QF6 1.6.99.- GO:0016491 ... O95831 38671223
    791680 8d3o:B (2.25) BS02 FAD 1.6.99.- GO:0016491 ... O95831 38671223
    791681 8d3p:A (4.26) BS01 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791682 8d3p:B (4.26) BS01 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791683 8d3p:C (4.26) BS01 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791684 8d3p:C (4.26) BS02 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791685 8d3p:C (4.26) BS03 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791686 8d3p:D (4.26) BS01 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791687 8d3p:D (4.26) BS02 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791688 8d3p:E (4.26) BS01 dna 3.1.-.- GO:0000287 ... Q9KFX8 36272411
    791689 8d3p:F (4.26) BS01 dna 3.1.-.- GO:0000287 ... Q9KFX8 36272411
    791690 8d3p:I (4.26) BS01 dna 3.1.12.1 N/A N/A 36272411
    791691 8d3p:I (4.26) BS02 dna 3.1.12.1 N/A N/A 36272411
    791692 8d3p:I (4.26) BS03 SF4 3.1.12.1 N/A N/A 36272411
    791693 8d3p:I (4.26) BS04 MN 3.1.12.1 N/A N/A 36272411
    791694 8d3q:A (3.9) BS01 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791695 8d3q:B (3.9) BS01 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791696 8d3q:C (3.9) BS01 dna 3.1.-.- GO:0003676 ... Q9KFX9 36272411
    791697 8d3q:E (3.9) BS01 dna 3.1.-.- GO:0000287 ... Q9KFX8 36272411
    791698 8d3q:F (3.9) BS01 dna 3.1.-.- GO:0000287 ... Q9KFX8 36272411
    791699 8d3q:I (3.9) BS01 dna 3.1.12.1 N/A N/A 36272411
    791700 8d3q:I (3.9) BS02 SF4 3.1.12.1 N/A N/A 36272411
    791701 8d3q:I (3.9) BS03 MN 3.1.12.1 N/A N/A 36272411
    791702 8d3q:J (3.9) BS01 dna 3.1.12.1 N/A N/A 36272411
    791703 8d3q:J (3.9) BS02 SF4 3.1.12.1 N/A N/A 36272411
    791704 8d3r:A (3.04) BS01 dna 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    791705 8d3r:A (3.04) BS02 dna 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    791706 8d3r:A (3.04) BS03 DCP 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    791707 8d3r:A (3.04) BS04 CA 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    791708 8d3s:A (1.84) BS01 QD6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 38328097
    791709 8d3t:A (2.37) BS01 MAN 2.4.1.- N/A A0A2K2AMS7 36849618
    791710 8d3t:A (2.37) BS02 MAN 2.4.1.- N/A A0A2K2AMS7 36849618
    791711 8d3t:B (2.37) BS01 MAN 2.4.1.- N/A A0A2K2AMS7 36849618
    791712 8d3t:B (2.37) BS02 MAN 2.4.1.- N/A A0A2K2AMS7 36849618
    791713 8d3t:C (2.37) BS01 MAN 2.4.1.- N/A A0A2K2AMS7 36849618
    791714 8d3t:C (2.37) BS02 MAN 2.4.1.- N/A A0A2K2AMS7 36849618
    791715 8d3u:A (3.7) BS01 ADP 7.2.2.13 GO:0000166 ... P13637 36075933
    791716 8d3u:A (3.7) BS02 ALF 7.2.2.13 GO:0000166 ... P13637 36075933
    791717 8d3w:A (3.5) BS01 ACP 7.2.2.13 GO:0000166 ... P13637 36075933
    791718 8d3x:A (4.1) BS01 MF4 7.2.2.13 GO:0000166 ... P13637 36075933
    791719 8d3z:A (2.56) BS01 MAN 2.4.1.- N/A A0A2K2AMS7 36849618
    791720 8d3z:A (2.56) BS02 MN 2.4.1.- N/A A0A2K2AMS7 36849618
    791721 8d3z:B (2.56) BS01 MAN 2.4.1.- N/A A0A2K2AMS7 36849618
    791722 8d3z:B (2.56) BS02 MN 2.4.1.- N/A A0A2K2AMS7 36849618
    791723 8d40:A (3.554) BS01 CA ? GO:0005509 ... Q9NYQ6 N/A
    791724 8d40:A (3.554) BS02 CA ? GO:0005509 ... Q9NYQ6 N/A
    791725 8d40:A (3.554) BS03 CA ? GO:0005509 ... Q9NYQ6 N/A
    791726 8d40:A (3.554) BS04 CA ? GO:0005509 ... Q9NYQ6 N/A
    791727 8d40:A (3.554) BS05 CA ? GO:0005509 ... Q9NYQ6 N/A
    791728 8d40:A (3.554) BS06 CA ? GO:0005509 ... Q9NYQ6 N/A
    791729 8d40:A (3.554) BS07 CA ? GO:0005509 ... Q9NYQ6 N/A
    791730 8d40:A (3.554) BS08 CA ? GO:0005509 ... Q9NYQ6 N/A
    791731 8d40:B (3.554) BS01 CA ? GO:0005509 ... Q9NYQ6 N/A
    791732 8d40:B (3.554) BS02 CA ? GO:0005509 ... Q9NYQ6 N/A
    791733 8d40:B (3.554) BS03 CA ? GO:0005509 ... Q9NYQ6 N/A
    791734 8d40:B (3.554) BS04 CA ? GO:0005509 ... Q9NYQ6 N/A
    791735 8d40:B (3.554) BS05 CA ? GO:0005509 ... Q9NYQ6 N/A
    791736 8d40:B (3.554) BS06 CA ? GO:0005509 ... Q9NYQ6 N/A
    791737 8d40:B (3.554) BS07 CA ? GO:0005509 ... Q9NYQ6 N/A
    791738 8d41:A (2.0) BS01 Q93 ? N/A P35606 N/A
    791739 8d41:B (2.0) BS01 Q93 ? N/A P35606 N/A
    791740 8d42:A (2.91) BS01 dna 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    791741 8d42:A (2.91) BS02 dna 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    791742 8d42:A (2.91) BS03 CA 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    791743 8d42:A (2.91) BS04 DCP 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 37202477
    791744 8d43:B (2.88) BS01 CA ? GO:0005509 ... P14314 N/A
    791745 8d43:B (2.88) BS02 CA ? GO:0005509 ... P14314 N/A
    791746 8d47:A (2.0) BS01 peptide N/A N/A N/A 36701425
    791747 8d47:B (2.0) BS01 peptide N/A N/A N/A 36701425
    791748 8d47:H (2.0) BS01 peptide N/A N/A N/A 36701425
    791749 8d47:L (2.0) BS01 peptide N/A N/A N/A 36701425
    791750 8d49:A (3.2) BS01 rna ? GO:0003677 ... A0ACD6B9W3 36599980
    791751 8d4a:A (2.74) BS01 rna ? GO:0003677 ... A0ACD6B9W3 36599980
    791752 8d4a:A (2.74) BS02 rna ? GO:0003677 ... A0ACD6B9W3 36599980
    791753 8d4a:A (2.74) BS03 dna ? GO:0003677 ... A0ACD6B9W3 36599980
    791754 8d4a:A (2.74) BS04 dna ? GO:0003677 ... A0ACD6B9W3 36599980
    791755 8d4a:A (2.74) BS05 ZN ? GO:0003677 ... A0ACD6B9W3 36599980
    791756 8d4a:A (2.74) BS06 MG ? GO:0003677 ... A0ACD6B9W3 36599980
    791757 8d4a:A (2.74) BS07 MG ? GO:0003677 ... A0ACD6B9W3 36599980
    791758 8d4b:A (2.92) BS01 rna ? GO:0003677 ... A0ACD6B9W3 36599980
    791759 8d4b:A (2.92) BS02 rna ? GO:0003677 ... A0ACD6B9W3 36599980
    791760 8d4c:C (9.3) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791761 8d4c:D (9.3) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791762 8d4c:F (9.3) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791763 8d4c:H (9.3) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791764 8d4c:J (9.3) BS01 peptide ? GO:0005515 ... P35585 36269825
    791765 8d4c:M (9.3) BS01 peptide ? GO:0005515 ... P35585 36269825
    791766 8d4c:O (9.3) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    791767 8d4c:S (9.3) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    791768 8d4d:C (9.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791769 8d4d:D (9.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791770 8d4d:F (9.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791771 8d4d:H (9.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791772 8d4d:J (9.6) BS01 peptide ? GO:0005515 ... P35585 36269825
    791773 8d4d:M (9.6) BS01 peptide ? GO:0005515 ... P35585 36269825
    791774 8d4d:O (9.6) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    791775 8d4d:S (9.6) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    791776 8d4e:C (9.2) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791777 8d4e:H (9.2) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791778 8d4e:M (9.2) BS01 peptide ? GO:0005515 ... P35585 36269825
    791779 8d4e:S (9.2) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    791780 8d4e:Z (9.2) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791781 8d4f:C (9.8) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791782 8d4f:D (9.8) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791783 8d4f:F (9.8) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791784 8d4f:H (9.8) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791785 8d4f:J (9.8) BS01 peptide ? GO:0005515 ... P35585 36269825
    791786 8d4f:M (9.8) BS01 peptide ? GO:0005515 ... P35585 36269825
    791787 8d4f:O (9.8) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    791788 8d4f:Q (9.8) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791789 8d4f:S (9.8) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    791790 8d4f:Z (9.8) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791791 8d4g:C (11.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791792 8d4g:D (11.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791793 8d4g:F (11.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791794 8d4g:H (11.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791795 8d4g:J (11.6) BS01 peptide ? GO:0005515 ... P35585 36269825
    791796 8d4g:M (11.6) BS01 peptide ? GO:0005515 ... P35585 36269825
    791797 8d4g:O (11.6) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    791798 8d4g:Q (11.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825
    791799 8d4g:S (11.6) BS01 peptide ? GO:0000139 ... Q96PC3 36269825
    791800 8d4g:Z (11.6) BS01 GTP 3.6.5.2 GO:0000139 ... P84077 36269825

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).