SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    793201 8dds:B (3.5) BS04 PIO ? GO:0005216 ... J9SQF3 36283409
    793202 8dds:C (3.5) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793203 8dds:C (3.5) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793204 8dds:C (3.5) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793205 8dds:C (3.5) BS04 PIO ? GO:0005216 ... J9SQF3 36283409
    793206 8dds:D (3.5) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793207 8dds:D (3.5) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793208 8dds:D (3.5) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793209 8dds:D (3.5) BS04 PIO ? GO:0005216 ... J9SQF3 36283409
    793210 8ddt:A (3.1) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793211 8ddt:A (3.1) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793212 8ddt:A (3.1) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    793213 8ddt:B (3.1) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793214 8ddt:B (3.1) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793215 8ddt:B (3.1) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793216 8ddt:B (3.1) BS04 PIO ? GO:0005216 ... J9SQF3 36283409
    793217 8ddt:C (3.1) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793218 8ddt:C (3.1) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793219 8ddt:C (3.1) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    793220 8ddt:D (3.1) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793221 8ddt:D (3.1) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793222 8ddt:D (3.1) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    793223 8ddu:A (3.0) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793224 8ddu:A (3.0) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793225 8ddu:A (3.0) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    793226 8ddu:B (3.0) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793227 8ddu:B (3.0) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793228 8ddu:B (3.0) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    793229 8ddu:C (3.0) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793230 8ddu:C (3.0) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793231 8ddu:C (3.0) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    793232 8ddu:D (3.0) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793233 8ddu:D (3.0) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793234 8ddu:D (3.0) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    793235 8ddv:A (3.2) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793236 8ddv:A (3.2) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793237 8ddv:A (3.2) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    793238 8ddv:A (3.2) BS04 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793239 8ddv:B (3.2) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793240 8ddv:B (3.2) BS02 PIO ? GO:0005216 ... J9SQF3 36283409
    793241 8ddv:B (3.2) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793242 8ddv:C (3.2) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793243 8ddv:C (3.2) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793244 8ddv:C (3.2) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793245 8ddv:C (3.2) BS04 PIO ? GO:0005216 ... J9SQF3 36283409
    793246 8ddv:D (3.2) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793247 8ddv:D (3.2) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793248 8ddv:D (3.2) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793249 8ddv:D (3.2) BS04 PIO ? GO:0005216 ... J9SQF3 36283409
    793250 8ddw:A (4.7) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793251 8ddw:B (4.7) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793252 8ddw:C (4.7) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793253 8ddw:D (4.7) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793254 8ddx:A (3.8) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793255 8ddx:A (3.8) BS02 PIO ? GO:0005216 ... J9SQF3 36283409
    793256 8ddx:A (3.8) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793257 8ddx:A (3.8) BS04 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793258 8ddx:B (3.8) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793259 8ddx:B (3.8) BS02 PIO ? GO:0005216 ... J9SQF3 36283409
    793260 8ddx:B (3.8) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793261 8ddx:C (3.8) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793262 8ddx:C (3.8) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793263 8ddx:C (3.8) BS03 PIO ? GO:0005216 ... J9SQF3 36283409
    793264 8ddx:D (3.8) BS01 peptide ? GO:0005216 ... J9SQF3 36283409
    793265 8ddx:D (3.8) BS02 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793266 8ddx:D (3.8) BS03 9Z9 ? GO:0005216 ... J9SQF3 36283409
    793267 8ddx:D (3.8) BS04 PIO ? GO:0005216 ... J9SQF3 36283409
    793268 8de0:A (1.72) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    793269 8de0:B (1.72) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    793270 8de0:C (1.72) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    793271 8de0:D (1.72) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    793272 8de1:A (1.56) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    793273 8de1:B (1.56) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    793274 8de1:C (1.56) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    793275 8de1:D (1.56) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    793276 8de2:A (2.45) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    793277 8de2:B (2.45) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    793278 8de2:C (2.45) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    793279 8de2:D (2.45) BS01 NXL 3.5.2.6 GO:0005515 ... P62593 36324090
    793280 8de3:A (3.3) BS01 COC ? GO:0016020 ... F1RN70 N/A
    793281 8de3:A (3.3) BS02 Y01 ? GO:0016020 ... F1RN70 N/A
    793282 8de3:A (3.3) BS03 Y01 ? GO:0016020 ... F1RN70 N/A
    793283 8de4:A (2.9) BS01 B40 ? GO:0016020 ... F1RN70 N/A
    793284 8de4:A (2.9) BS02 Y01 ? GO:0016020 ... F1RN70 N/A
    793285 8de4:A (2.9) BS03 Y01 ? GO:0016020 ... F1RN70 N/A
    793286 8de5:A (2.02) BS01 NAD 1.2.1.12 GO:0004365 ... Q8X1X3 37709188
    793287 8de5:A (2.02) BS02 J0M 1.2.1.12 GO:0004365 ... Q8X1X3 37709188
    793288 8de6:A (3.2) BS01 BMA ? GO:0005579 ... P02748 36639734
    793289 8de6:A (3.2) BS02 CA ? GO:0005579 ... P02748 36639734
    793290 8de6:C (3.2) BS01 CA ? GO:0005579 ... P02748 36639734
    793291 8de6:G (3.2) BS01 BMA ? GO:0005579 ... P02748 36639734
    793292 8de6:G (3.2) BS02 BMA ? GO:0005579 ... P02748 36639734
    793293 8de6:G (3.2) BS03 CA ? GO:0005579 ... P02748 36639734
    793294 8de7:A (3.27) BS01 K ? GO:0005267 ... F1QAI2 36841877
    793295 8de7:A (3.27) BS02 K ? GO:0005267 ... F1QAI2 36841877
    793296 8de7:A (3.27) BS03 K ? GO:0005267 ... F1QAI2 36841877
    793297 8de7:B (3.27) BS01 K ? GO:0005267 ... F1QAI2 36841877
    793298 8de7:B (3.27) BS02 K ? GO:0005267 ... F1QAI2 36841877
    793299 8de7:B (3.27) BS03 K ? GO:0005267 ... F1QAI2 36841877
    793300 8de8:A (2.82) BS01 D21 ? GO:0005267 ... F1QAI2 36841877
    793301 8de8:A (2.82) BS02 D21 ? GO:0005267 ... F1QAI2 36841877
    793302 8de8:A (2.82) BS03 K ? GO:0005267 ... F1QAI2 36841877
    793303 8de8:A (2.82) BS04 K ? GO:0005267 ... F1QAI2 36841877
    793304 8de8:A (2.82) BS05 K ? GO:0005267 ... F1QAI2 36841877
    793305 8de8:A (2.82) BS06 K ? GO:0005267 ... F1QAI2 36841877
    793306 8de8:B (2.82) BS01 D21 ? GO:0005267 ... F1QAI2 36841877
    793307 8de8:B (2.82) BS02 D21 ? GO:0005267 ... F1QAI2 36841877
    793308 8de8:B (2.82) BS03 K ? GO:0005267 ... F1QAI2 36841877
    793309 8de8:B (2.82) BS04 K ? GO:0005267 ... F1QAI2 36841877
    793310 8de8:B (2.82) BS05 K ? GO:0005267 ... F1QAI2 36841877
    793311 8de8:B (2.82) BS06 K ? GO:0005267 ... F1QAI2 36841877
    793312 8de9:A (3.4) BS01 PEV ? GO:0005267 ... F1QAI2 36841877
    793313 8de9:A (3.4) BS02 K ? GO:0005267 ... F1QAI2 36841877
    793314 8de9:A (3.4) BS03 K ? GO:0005267 ... F1QAI2 36841877
    793315 8de9:A (3.4) BS04 K ? GO:0005267 ... F1QAI2 36841877
    793316 8de9:B (3.4) BS01 PEV ? GO:0005267 ... F1QAI2 36841877
    793317 8de9:B (3.4) BS02 K ? GO:0005267 ... F1QAI2 36841877
    793318 8de9:B (3.4) BS03 K ? GO:0005267 ... F1QAI2 36841877
    793319 8de9:B (3.4) BS04 K ? GO:0005267 ... F1QAI2 36841877
    793320 8dea:A (2.214) BS01 R7X 3.4.21.46 GO:0004252 ... P00746 36272185
    793321 8dea:B (2.214) BS01 R7X 3.4.21.46 GO:0004252 ... P00746 36272185
    793322 8dea:C (2.214) BS01 R7X 3.4.21.46 GO:0004252 ... P00746 36272185
    793323 8dea:D (2.214) BS01 R7X 3.4.21.46 GO:0004252 ... P00746 36272185
    793324 8deb:A (1.94) BS01 NAP ? N/A I9VY56 37437886
    793325 8deb:B (1.94) BS01 NAP ? N/A I9VY56 37437886
    793326 8deg:A (2.79) BS01 SIQ 2.7.11.25 GO:0004672 ... Q12852 36469401
    793327 8dej:A (2.86) BS01 rna 3.1.-.- GO:0003723 ... Q72WF9 36805026
    793328 8dej:B (2.86) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793329 8dej:B (2.86) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    793330 8dej:C (2.86) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793331 8dej:C (2.86) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    793332 8dej:D (2.86) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793333 8dej:D (2.86) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    793334 8dej:E (2.86) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793335 8dej:E (2.86) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    793336 8dej:F (2.86) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793337 8dej:F (2.86) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    793338 8dej:G (2.86) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793339 8dej:G (2.86) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    793340 8dej:H (2.86) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793341 8dej:I (2.86) BS01 rna ? N/A Q72WF8 36805026
    793342 8dej:I (2.86) BS02 dna ? N/A Q72WF8 36805026
    793343 8dej:I (2.86) BS03 dna ? N/A Q72WF8 36805026
    793344 8dej:J (2.86) BS01 dna ? N/A Q72WF8 36805026
    793345 8dej:J (2.86) BS02 dna ? N/A Q72WF8 36805026
    793346 8dej:K (2.86) BS01 dna ? N/A Q72WF8 36805026
    793347 8dej:K (2.86) BS02 dna ? N/A Q72WF8 36805026
    793348 8dek:A (2.5) BS01 ZN ? N/A B2UKY7 36049519
    793349 8dek:B (2.5) BS01 ZN ? N/A B2UKY7 36049519
    793350 8del:A (2.56) BS01 ZN N/A GO:0005506 ... N/A 36106943
    793351 8del:B (2.56) BS01 ZN N/A GO:0005506 ... N/A 36106943
    793352 8del:C (2.56) BS01 ZN N/A GO:0005506 ... N/A 36106943
    793353 8deo:A (2.3) BS01 CA ? N/A Q5HKE8 36702253
    793354 8deo:B (2.3) BS01 CA ? N/A Q5HKE8 36702253
    793355 8dep:A (3.6) BS01 AJP ? GO:0005506 ... P0ABE7
    P41440
    36071163
    793356 8der:L (3.3) BS01 BMA N/A N/A N/A 37295404
    793357 8des:A (2.6) BS01 peptide ? GO:0005198 ... A0A6G9L6B3 36255280
    793358 8deu:B (2.95) BS01 peptide ? GO:0005886 ... Q5F725 36121287
    793359 8dev:B (3.08) BS01 peptide ? GO:0005886 ... Q5F725 36121287
    793360 8dew:B (2.89) BS01 peptide ? GO:0005886 ... Q5F725 36121287
    793361 8dex:A (2.7) BS01 rna 3.1.-.- GO:0003723 ... Q72WF9 36805026
    793362 8dex:B (2.7) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793363 8dex:C (2.7) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793364 8dex:D (2.7) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793365 8dex:E (2.7) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793366 8dex:F (2.7) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793367 8dex:G (2.7) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793368 8dex:H (2.7) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793369 8dex:I (2.7) BS01 rna ? N/A Q72WF8 36805026
    793370 8dey:A (3.7) BS01 ZN ? N/A Q96SW2 36863346
    793371 8dey:A (3.7) BS02 LWK ? N/A Q96SW2 36863346
    793372 8dey:C (3.7) BS01 LWK ? N/A Q9UKS7 36863346
    793373 8dey:C (3.7) BS02 ZN ? N/A Q9UKS7 36863346
    793374 8dey:C (3.7) BS03 ZN ? N/A Q9UKS7 36863346
    793375 8dey:D (3.7) BS01 ZN ? N/A Q96SW2 36863346
    793376 8dey:F (3.7) BS01 ZN ? N/A Q9UKS7 36863346
    793377 8dey:F (3.7) BS02 ZN ? N/A Q9UKS7 36863346
    793378 8df2:A (2.35) BS01 ZN ? N/A B2UKY7 36049519
    793379 8df2:A (2.35) BS02 CA ? N/A B2UKY7 36049519
    793380 8df2:B (2.35) BS01 ZN ? N/A B2UKY7 36049519
    793381 8df2:B (2.35) BS02 CA ? N/A B2UKY7 36049519
    793382 8df2:C (2.35) BS01 ZN ? N/A B2UKY7 36049519
    793383 8df2:C (2.35) BS02 CA ? N/A B2UKY7 36049519
    793384 8df2:D (2.35) BS01 ZN ? N/A B2UKY7 36049519
    793385 8df2:D (2.35) BS02 CA ? N/A B2UKY7 36049519
    793386 8df5:E (2.7) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 35762884
    793387 8df5:F (2.7) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 35762884
    793388 8df7:A (3.52) BS01 dna ? GO:0003677 ... Q977W1 35969036
    793389 8df7:A (3.52) BS02 dna ? GO:0003677 ... Q977W1 35969036
    793390 8df7:B (3.52) BS01 dna ? GO:0003677 ... Q977W1 35969036
    793391 8df7:B (3.52) BS02 dna ? GO:0003677 ... Q977W1 35969036
    793392 8df8:A (2.92) BS01 dna ? GO:0003677 ... Q977W1 35969036
    793393 8df8:A (2.92) BS02 dna ? GO:0003677 ... Q977W1 35969036
    793394 8df8:A (2.92) BS03 PO3 ? GO:0003677 ... Q977W1 35969036
    793395 8df8:B (2.92) BS01 dna ? GO:0003677 ... Q977W1 35969036
    793396 8df8:B (2.92) BS02 dna ? GO:0003677 ... Q977W1 35969036
    793397 8df9:A (3.24) BS01 dna ? GO:0003677 ... Q977W1 35969036
    793398 8df9:A (3.24) BS02 dna ? GO:0003677 ... Q977W1 35969036
    793399 8df9:A (3.24) BS03 MG ? GO:0003677 ... Q977W1 35969036
    793400 8df9:A (3.24) BS04 MG ? GO:0003677 ... Q977W1 35969036

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).