SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    793401 8df9:B (3.24) BS01 dna ? GO:0003677 ... Q977W1 35969036
    793402 8df9:B (3.24) BS02 dna ? GO:0003677 ... Q977W1 35969036
    793403 8df9:B (3.24) BS03 dna ? GO:0003677 ... Q977W1 35969036
    793404 8df9:B (3.24) BS04 dna ? GO:0003677 ... Q977W1 35969036
    793405 8df9:B (3.24) BS05 MG ? GO:0003677 ... Q977W1 35969036
    793406 8df9:B (3.24) BS06 MG ? GO:0003677 ... Q977W1 35969036
    793407 8df9:B (3.24) BS07 MG ? GO:0003677 ... Q977W1 35969036
    793408 8dfa:A (2.8) BS01 rna 3.1.-.- GO:0003723 ... Q72WF9 36805026
    793409 8dfa:B (2.8) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793410 8dfa:B (2.8) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    793411 8dfa:C (2.8) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793412 8dfa:C (2.8) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    793413 8dfa:D (2.8) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793414 8dfa:D (2.8) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    793415 8dfa:E (2.8) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793416 8dfa:E (2.8) BS02 dna ? GO:0043571 ... Q72WF7 36805026
    793417 8dfa:F (2.8) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793418 8dfa:G (2.8) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793419 8dfa:H (2.8) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793420 8dfa:I (2.8) BS01 rna ? N/A Q72WF8 36805026
    793421 8dfa:I (2.8) BS02 dna ? N/A Q72WF8 36805026
    793422 8dfa:J (2.8) BS01 dna ? N/A Q72WF8 36805026
    793423 8dfb:A (3.17) BS01 dna ? GO:0003677 ... Q977W1 35969036
    793424 8dfb:A (3.17) BS02 dna ? GO:0003677 ... Q977W1 35969036
    793425 8dfb:B (3.17) BS01 dna ? GO:0003677 ... Q977W1 35969036
    793426 8dfb:B (3.17) BS02 dna ? GO:0003677 ... Q977W1 35969036
    793427 8dfc:A (2.48) BS01 ICS 1.18.6.1 GO:0009399 ... P07328 38575747
    793428 8dfc:A (2.48) BS02 CLF 1.18.6.1 GO:0009399 ... P07328 38575747
    793429 8dfc:B (2.48) BS01 CLF 1.18.6.1 GO:0009399 ... P07329 38575747
    793430 8dfc:B (2.48) BS02 FE 1.18.6.1 GO:0009399 ... P07329 38575747
    793431 8dfc:B (2.48) BS03 FE 1.18.6.1 GO:0009399 ... P07329 38575747
    793432 8dfc:C (2.48) BS01 ICS 1.18.6.1 GO:0009399 ... P07328 38575747
    793433 8dfc:C (2.48) BS02 CLF 1.18.6.1 GO:0009399 ... P07328 38575747
    793434 8dfc:D (2.48) BS01 FE 1.18.6.1 GO:0009399 ... P07329 38575747
    793435 8dfc:D (2.48) BS02 CLF 1.18.6.1 GO:0009399 ... P07329 38575747
    793436 8dfc:D (2.48) BS03 FE 1.18.6.1 GO:0009399 ... P07329 38575747
    793437 8dfc:E (2.48) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 38575747
    793438 8dfc:E (2.48) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    793439 8dfc:E (2.48) BS03 ALF 1.18.6.1 GO:0005524 ... P00459 38575747
    793440 8dfc:E (2.48) BS04 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    793441 8dfc:F (2.48) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 38575747
    793442 8dfc:F (2.48) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    793443 8dfc:F (2.48) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    793444 8dfc:F (2.48) BS04 ALF 1.18.6.1 GO:0005524 ... P00459 38575747
    793445 8dfd:A (2.12) BS01 ICS 1.18.6.1 GO:0009399 ... P07328 38575747
    793446 8dfd:A (2.12) BS02 CLF 1.18.6.1 GO:0009399 ... P07328 38575747
    793447 8dfd:B (2.12) BS01 CLF 1.18.6.1 GO:0009399 ... P07329 38575747
    793448 8dfd:B (2.12) BS02 FE 1.18.6.1 GO:0009399 ... P07329 38575747
    793449 8dfd:B (2.12) BS03 FE 1.18.6.1 GO:0009399 ... P07329 38575747
    793450 8dfd:C (2.12) BS01 ICS 1.18.6.1 GO:0009399 ... P07328 38575747
    793451 8dfd:C (2.12) BS02 CLF 1.18.6.1 GO:0009399 ... P07328 38575747
    793452 8dfd:D (2.12) BS01 FE 1.18.6.1 GO:0009399 ... P07329 38575747
    793453 8dfd:D (2.12) BS02 CLF 1.18.6.1 GO:0009399 ... P07329 38575747
    793454 8dfd:D (2.12) BS03 FE 1.18.6.1 GO:0009399 ... P07329 38575747
    793455 8dfd:E (2.12) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 38575747
    793456 8dfd:E (2.12) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    793457 8dfd:E (2.12) BS03 ALF 1.18.6.1 GO:0005524 ... P00459 38575747
    793458 8dfd:E (2.12) BS04 MG 1.18.6.1 GO:0005524 ... P00459 38575747
    793459 8dfd:E (2.12) BS05 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    793460 8dfd:F (2.12) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 38575747
    793461 8dfd:F (2.12) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    793462 8dfd:F (2.12) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    793463 8dfd:F (2.12) BS04 ALF 1.18.6.1 GO:0005524 ... P00459 38575747
    793464 8dfd:F (2.12) BS05 MG 1.18.6.1 GO:0005524 ... P00459 38575747
    793465 8dfd:G (2.12) BS01 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    793466 8dfd:G (2.12) BS02 ALF 1.18.6.1 GO:0005524 ... P00459 38575747
    793467 8dfd:G (2.12) BS03 SF4 1.18.6.1 GO:0005524 ... P00459 38575747
    793468 8dfd:G (2.12) BS04 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    793469 8dfd:H (2.12) BS01 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    793470 8dfd:H (2.12) BS02 SF4 1.18.6.1 GO:0005524 ... P00459 38575747
    793471 8dfd:H (2.12) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    793472 8dfd:H (2.12) BS04 ALF 1.18.6.1 GO:0005524 ... P00459 38575747
    793473 8dfo:A (3.1) BS01 rna 3.1.-.- GO:0003723 ... Q72WF9 36805026
    793474 8dfo:B (3.1) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793475 8dfo:C (3.1) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793476 8dfo:D (3.1) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793477 8dfo:E (3.1) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793478 8dfo:F (3.1) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793479 8dfo:G (3.1) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793480 8dfo:H (3.1) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793481 8dfo:I (3.1) BS01 rna ? N/A Q72WF8 36805026
    793482 8dfr:A (1.7) BS01 NDP 1.5.1.3 GO:0003729 ... P00378 N/A
    793483 8dfs:A (3.0) BS01 rna 3.1.-.- GO:0003723 ... Q72WF9 36805026
    793484 8dfs:B (3.0) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793485 8dfs:C (3.0) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793486 8dfs:D (3.0) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793487 8dfs:E (3.0) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793488 8dfs:F (3.0) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793489 8dfs:G (3.0) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793490 8dfs:H (3.0) BS01 rna ? GO:0043571 ... Q72WF7 36805026
    793491 8dfs:I (3.0) BS01 rna ? N/A Q72WF8 36805026
    793492 8dft:A (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793493 8dft:A (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793494 8dft:A (4.1) BS03 TT0 ? N/A A3MU74 36750723
    793495 8dft:A (4.1) BS04 TT0 ? N/A A3MU74 36750723
    793496 8dft:B (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793497 8dft:B (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793498 8dft:C (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793499 8dft:C (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793500 8dft:D (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793501 8dft:D (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793502 8dft:E (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793503 8dft:E (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793504 8dft:F (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793505 8dft:F (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793506 8dft:F (4.1) BS03 TT0 ? N/A A3MU74 36750723
    793507 8dft:G (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793508 8dft:G (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793509 8dft:G (4.1) BS03 TT0 ? N/A A3MU74 36750723
    793510 8dft:G (4.1) BS04 TT0 ? N/A A3MU74 36750723
    793511 8dft:H (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793512 8dft:H (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793513 8dft:H (4.1) BS03 TT0 ? N/A A3MU74 36750723
    793514 8dft:H (4.1) BS04 TT0 ? N/A A3MU74 36750723
    793515 8dft:I (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793516 8dft:I (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793517 8dft:I (4.1) BS03 TT0 ? N/A A3MU74 36750723
    793518 8dft:I (4.1) BS04 TT0 ? N/A A3MU74 36750723
    793519 8dft:J (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793520 8dft:J (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793521 8dft:J (4.1) BS03 TT0 ? N/A A3MU74 36750723
    793522 8dft:J (4.1) BS04 TT0 ? N/A A3MU74 36750723
    793523 8dft:K (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793524 8dft:K (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793525 8dft:K (4.1) BS03 TT0 ? N/A A3MU74 36750723
    793526 8dft:K (4.1) BS04 TT0 ? N/A A3MU74 36750723
    793527 8dft:L (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793528 8dft:L (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793529 8dft:L (4.1) BS03 TT0 ? N/A A3MU74 36750723
    793530 8dft:L (4.1) BS04 TT0 ? N/A A3MU74 36750723
    793531 8dft:M (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793532 8dft:M (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793533 8dft:M (4.1) BS03 TT0 ? N/A A3MU74 36750723
    793534 8dft:M (4.1) BS04 TT0 ? N/A A3MU74 36750723
    793535 8dft:N (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793536 8dft:N (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793537 8dft:N (4.1) BS03 TT0 ? N/A A3MU74 36750723
    793538 8dft:N (4.1) BS04 TT0 ? N/A A3MU74 36750723
    793539 8dft:O (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793540 8dft:O (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793541 8dft:O (4.1) BS03 TT0 ? N/A A3MU74 36750723
    793542 8dft:O (4.1) BS04 TT0 ? N/A A3MU74 36750723
    793543 8dft:P (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793544 8dft:P (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793545 8dft:P (4.1) BS03 TT0 ? N/A A3MU74 36750723
    793546 8dft:P (4.1) BS04 TT0 ? N/A A3MU74 36750723
    793547 8dft:Q (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793548 8dft:Q (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793549 8dft:Q (4.1) BS03 TT0 ? N/A A3MU74 36750723
    793550 8dft:Q (4.1) BS04 TT0 ? N/A A3MU74 36750723
    793551 8dft:R (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793552 8dft:R (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793553 8dft:R (4.1) BS03 TT0 ? N/A A3MU74 36750723
    793554 8dft:R (4.1) BS04 TT0 ? N/A A3MU74 36750723
    793555 8dft:S (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793556 8dft:S (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793557 8dft:S (4.1) BS03 TT0 ? N/A A3MU74 36750723
    793558 8dft:S (4.1) BS04 TT0 ? N/A A3MU74 36750723
    793559 8dft:T (4.1) BS01 TT0 ? N/A A3MU74 36750723
    793560 8dft:T (4.1) BS02 TT0 ? N/A A3MU74 36750723
    793561 8dft:T (4.1) BS03 TT0 ? N/A A3MU74 36750723
    793562 8dfu:0 (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793563 8dfu:1 (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793564 8dfu:2 (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793565 8dfu:3 (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793566 8dfu:A (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793567 8dfu:A (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793568 8dfu:B (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793569 8dfu:B (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793570 8dfu:B (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793571 8dfu:C (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793572 8dfu:C (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793573 8dfu:D (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793574 8dfu:D (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793575 8dfu:E (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793576 8dfu:E (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793577 8dfu:F (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793578 8dfu:F (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793579 8dfu:G (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793580 8dfu:G (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793581 8dfu:G (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793582 8dfu:H (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793583 8dfu:H (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793584 8dfu:H (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793585 8dfu:I (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793586 8dfu:I (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793587 8dfu:I (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793588 8dfu:J (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793589 8dfu:J (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793590 8dfu:J (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793591 8dfu:K (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793592 8dfu:K (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793593 8dfu:K (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793594 8dfu:L (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793595 8dfu:L (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793596 8dfu:L (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793597 8dfu:M (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793598 8dfu:M (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793599 8dfu:M (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793600 8dfu:N (3.44) BS01 RHR ? N/A A0A401HBH5 36750723

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).