SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    793601 8dfu:N (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793602 8dfu:N (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793603 8dfu:O (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793604 8dfu:O (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793605 8dfu:O (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793606 8dfu:P (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793607 8dfu:P (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793608 8dfu:Q (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793609 8dfu:Q (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793610 8dfu:Q (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793611 8dfu:R (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793612 8dfu:R (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793613 8dfu:R (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793614 8dfu:S (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793615 8dfu:S (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793616 8dfu:S (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793617 8dfu:T (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793618 8dfu:T (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793619 8dfu:T (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793620 8dfu:U (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793621 8dfu:U (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793622 8dfu:U (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793623 8dfu:V (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793624 8dfu:V (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793625 8dfu:V (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793626 8dfu:W (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793627 8dfu:W (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793628 8dfu:W (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793629 8dfu:X (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793630 8dfu:X (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793631 8dfu:X (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793632 8dfu:Y (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793633 8dfu:Y (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793634 8dfu:Y (3.44) BS03 RHR ? N/A A0A401HBH5 36750723
    793635 8dfu:Z (3.44) BS01 RHR ? N/A A0A401HBH5 36750723
    793636 8dfu:Z (3.44) BS02 RHR ? N/A A0A401HBH5 36750723
    793637 8dfv:A (3.06) BS01 rna 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793638 8dfv:A (3.06) BS02 CA 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793639 8dfv:A (3.06) BS03 CA 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793640 8dfv:A (3.06) BS04 CA 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793641 8dfv:A (3.06) BS05 CA 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793642 8dfv:K (3.06) BS01 rna ? GO:0003723 ... Q9VJY9 36182693
    793643 8dg1:B (1.95) BS01 CU ? GO:0003756 ... P0AEG4 36760747
    793644 8dg2:B (1.95) BS01 CU ? GO:0003756 ... P0AEG4 36760747
    793645 8dg5:A (3.26) BS01 rna 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793646 8dg5:A (3.26) BS02 MG 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793647 8dg5:A (3.26) BS03 U5P 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793648 8dg5:A (3.26) BS04 MG 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793649 8dg5:K (3.26) BS01 rna ? GO:0003723 ... Q9VJY9 36182693
    793650 8dg6:A (1.986) BS01 S7X 3.4.21.46 GO:0004252 ... P00746 36272185
    793651 8dg7:A (3.32) BS01 rna 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793652 8dg7:A (3.32) BS02 rna 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793653 8dg7:A (3.32) BS03 MG 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793654 8dg7:A (3.32) BS04 MG 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793655 8dg7:A (3.32) BS05 U5P 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793656 8dg7:K (3.32) BS01 rna ? GO:0003723 ... Q9VJY9 36182693
    793657 8dg7:K (3.32) BS02 rna ? GO:0003723 ... Q9VJY9 36182693
    793658 8dga:A (3.73) BS01 rna 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793659 8dga:A (3.73) BS02 rna 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793660 8dga:A (3.73) BS03 U5P 3.1.26.3 GO:0003006 ... Q9VCU9 36182693
    793661 8dga:K (3.73) BS01 rna ? GO:0003723 ... Q9VJY9 36182693
    793662 8dga:K (3.73) BS02 rna ? GO:0003723 ... Q9VJY9 36182693
    793663 8dgb:A (2.87) BS01 B1S 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37637734
    793664 8dgb:B (2.87) BS01 B1S 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37637734
    793665 8dgc:A (3.4) BS01 ATP N/A N/A N/A 35951700
    793666 8dgc:B (3.4) BS01 ATP N/A N/A N/A 35951700
    793667 8dgc:C (3.4) BS01 ATP N/A N/A N/A 35951700
    793668 8dgc:D (3.4) BS01 ATP N/A N/A N/A 35951700
    793669 8dgc:E (3.4) BS01 ATP 3.1.21.-
    3.6.4.-
    GO:0000166 ... A0A7G3WWS0 35951700
    793670 8dgc:F (3.4) BS01 ATP 3.1.21.-
    3.6.4.-
    GO:0000166 ... A0A7G3WWS0 35951700
    793671 8dgc:G (3.4) BS01 ATP 3.1.21.-
    3.6.4.-
    GO:0000166 ... A0A7G3WWS0 35951700
    793672 8dgc:H (3.4) BS01 ATP 3.1.21.-
    3.6.4.-
    GO:0000166 ... A0A7G3WWS0 35951700
    793673 8dgd:A (1.9) BS01 ZN ? GO:0005829 ... A0A0H3GUR8 N/A
    793674 8dge:A (1.89) BS01 CA N/A GO:0005975 ... N/A 37500984
    793675 8dge:A (1.89) BS02 MN N/A GO:0005975 ... N/A 37500984
    793676 8dge:B (1.89) BS01 CA N/A GO:0005975 ... N/A 37500984
    793677 8dge:B (1.89) BS02 MN N/A GO:0005975 ... N/A 37500984
    793678 8dge:C (1.89) BS01 CA N/A GO:0005975 ... N/A 37500984
    793679 8dge:C (1.89) BS02 MN N/A GO:0005975 ... N/A 37500984
    793680 8dge:D (1.89) BS01 CA N/A GO:0005975 ... N/A 37500984
    793681 8dge:D (1.89) BS02 MN N/A GO:0005975 ... N/A 37500984
    793682 8dgf:A (2.9) BS01 ATP N/A N/A N/A 35951700
    793683 8dgf:B (2.9) BS01 ATP N/A N/A N/A 35951700
    793684 8dgf:C (2.9) BS01 ATP N/A N/A N/A 35951700
    793685 8dgf:D (2.9) BS01 ATP N/A N/A N/A 35951700
    793686 8dgh:A (-1.00) BS01 peptide ? GO:0000922 ... P0DP23 36070238
    793687 8dgk:A (-1.00) BS01 peptide ? GO:0000922 ... P0DP23 36070238
    793688 8dgm:A (3.2) BS01 peptide ? GO:0000165 ... P62258 37336884
    793689 8dgn:A (3.16) BS01 peptide ? GO:0000165 ... P62258 37336884
    793690 8dgo:B (2.3) BS01 peptide ? GO:0001784 ... P62993 37336884
    793691 8dgp:A (2.7) BS01 peptide ? GO:0000165 ... P62258 37336884
    793692 8dgp:B (2.7) BS01 peptide ? GO:0000165 ... P62258 37336884
    793693 8dgp:C (2.7) BS01 peptide ? GO:0000165 ... P62258 37336884
    793694 8dgp:D (2.7) BS01 peptide ? GO:0000165 ... P62258 37336884
    793695 8dgq:A (1.95) BS01 peptide ? N/A P20936 36417908
    793696 8dgq:B (1.95) BS01 peptide ? N/A P20936 36417908
    793697 8dgs:A (4.3) BS01 AGS 2.7.11.1 GO:0000165 ... P15056 37516774
    793698 8dgs:A (4.3) BS02 ZN 2.7.11.1 GO:0000165 ... P15056 37516774
    793699 8dgs:A (4.3) BS03 ZN 2.7.11.1 GO:0000165 ... P15056 37516774
    793700 8dgs:B (4.3) BS01 AGS 2.7.12.2 GO:0000165 ... Q02750 37516774
    793701 8dgs:B (4.3) BS02 LCJ 2.7.12.2 GO:0000165 ... Q02750 37516774
    793702 8dgs:E (4.3) BS01 MG 3.6.5.2 GO:0003924 ... P01116 37516774
    793703 8dgs:E (4.3) BS02 GNP 3.6.5.2 GO:0003924 ... P01116 37516774
    793704 8dgt:A (3.9) BS01 AGS 2.7.11.1 GO:0000165 ... P15056 37516774
    793705 8dgt:A (3.9) BS02 ZN 2.7.11.1 GO:0000165 ... P15056 37516774
    793706 8dgt:A (3.9) BS03 ZN 2.7.11.1 GO:0000165 ... P15056 37516774
    793707 8dgt:B (3.9) BS01 MG 2.7.12.2 GO:0000165 ... Q02750 37516774
    793708 8dgt:B (3.9) BS02 AGS 2.7.12.2 GO:0000165 ... Q02750 37516774
    793709 8dgt:B (3.9) BS03 LCJ 2.7.12.2 GO:0000165 ... Q02750 37516774
    793710 8dgt:F (3.9) BS01 MG 3.6.5.2 GO:0003924 ... P01116 37516774
    793711 8dgt:F (3.9) BS02 GNP 3.6.5.2 GO:0003924 ... P01116 37516774
    793712 8dgu:H (1.89) BS01 peptide N/A N/A N/A 36889306
    793713 8dgu:L (1.89) BS01 peptide N/A N/A N/A 36889306
    793714 8dgv:H (2.3) BS01 peptide N/A N/A N/A 36889306
    793715 8dgv:L (2.3) BS01 peptide N/A N/A N/A 36889306
    793716 8dgw:A (2.81) BS01 peptide N/A N/A N/A 36889306
    793717 8dgw:A (2.81) BS02 peptide N/A N/A N/A 36889306
    793718 8dgw:B (2.81) BS01 peptide N/A N/A N/A 36889306
    793719 8dgw:C (2.81) BS01 peptide N/A N/A N/A 36889306
    793720 8dgw:C (2.81) BS02 peptide N/A N/A N/A 36889306
    793721 8dgw:D (2.81) BS01 peptide N/A N/A N/A 36889306
    793722 8dgw:E (2.81) BS01 peptide N/A N/A N/A 36889306
    793723 8dgw:E (2.81) BS02 peptide N/A N/A N/A 36889306
    793724 8dgw:F (2.81) BS01 peptide N/A N/A N/A 36889306
    793725 8dgw:F (2.81) BS02 peptide N/A N/A N/A 36889306
    793726 8dgw:H (2.81) BS01 peptide N/A N/A N/A 36889306
    793727 8dgw:H (2.81) BS02 peptide N/A N/A N/A 36889306
    793728 8dgw:L (2.81) BS01 peptide N/A N/A N/A 36889306
    793729 8dgw:L (2.81) BS02 peptide N/A N/A N/A 36889306
    793730 8dgx:A (2.89) BS01 peptide N/A N/A N/A 36889306
    793731 8dgx:B (2.89) BS01 peptide N/A N/A N/A 36889306
    793732 8dgx:H (2.89) BS01 peptide N/A N/A N/A 36889306
    793733 8dgx:L (2.89) BS01 peptide N/A N/A N/A 36889306
    793734 8dgy:A (1.65) BS01 S9U 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... K9N7C7 36654747
    793735 8dgy:A (1.65) BS02 SD6 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... K9N7C7 36654747
    793736 8dgz:A (2.8) BS01 peptide 3.4.22.60 GO:0003723 ... P55210 37005499
    793737 8dgz:B (2.8) BS01 peptide 3.4.22.60 GO:0003723 ... P55210 37005499
    793738 8dgz:B (2.8) BS02 8YJ 3.4.22.60 GO:0003723 ... P55210 37005499
    793739 8dh0:B (2.9) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793740 8dh0:B (2.9) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793741 8dh0:F (2.9) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793742 8dh0:F (2.9) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793743 8dh0:F (2.9) BS03 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793744 8dh0:J (2.9) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793745 8dh0:J (2.9) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793746 8dh0:N (2.9) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793747 8dh0:N (2.9) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793748 8dh0:N (2.9) BS03 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793749 8dh1:B (2.65) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793750 8dh1:B (2.65) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793751 8dh1:B (2.65) BS03 S8L 2.7.7.6 GO:0000428 ... P00573 36635281
    793752 8dh1:E (2.65) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793753 8dh1:E (2.65) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793754 8dh1:I (2.65) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793755 8dh1:I (2.65) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793756 8dh1:L (2.65) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793757 8dh1:L (2.65) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793758 8dh1:L (2.65) BS03 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793759 8dh2:B (2.9) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793760 8dh2:B (2.9) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793761 8dh2:B (2.9) BS03 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793762 8dh2:B (2.9) BS04 3PO 2.7.7.6 GO:0000428 ... P00573 36635281
    793763 8dh2:E (2.9) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793764 8dh2:E (2.9) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793765 8dh2:E (2.9) BS03 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793766 8dh2:E (2.9) BS04 3PO 2.7.7.6 GO:0000428 ... P00573 36635281
    793767 8dh2:I (2.9) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793768 8dh2:I (2.9) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793769 8dh2:I (2.9) BS03 3PO 2.7.7.6 GO:0000428 ... P00573 36635281
    793770 8dh2:L (2.9) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793771 8dh2:L (2.9) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793772 8dh2:L (2.9) BS03 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793773 8dh3:B (3.0) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793774 8dh3:B (3.0) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793775 8dh3:B (3.0) BS03 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793776 8dh3:E (3.0) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793777 8dh3:E (3.0) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793778 8dh3:I (3.0) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793779 8dh3:I (3.0) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793780 8dh3:I (3.0) BS03 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793781 8dh3:M (3.0) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793782 8dh3:M (3.0) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793783 8dh3:M (3.0) BS03 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793784 8dh4:B (2.8) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793785 8dh4:B (2.8) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793786 8dh4:B (2.8) BS03 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793787 8dh4:B (2.8) BS04 S96 2.7.7.6 GO:0000428 ... P00573 36635281
    793788 8dh4:E (2.8) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793789 8dh4:E (2.8) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793790 8dh4:E (2.8) BS03 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793791 8dh4:E (2.8) BS04 S96 2.7.7.6 GO:0000428 ... P00573 36635281
    793792 8dh4:I (2.8) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793793 8dh4:I (2.8) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793794 8dh4:M (2.8) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793795 8dh4:M (2.8) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793796 8dh4:M (2.8) BS03 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793797 8dh5:B (2.85) BS01 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793798 8dh5:B (2.85) BS02 rna 2.7.7.6 GO:0000428 ... P00573 36635281
    793799 8dh5:B (2.85) BS03 dna 2.7.7.6 GO:0000428 ... P00573 36635281
    793800 8dh5:B (2.85) BS04 ATP 2.7.7.6 GO:0000428 ... P00573 36635281

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).