SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    794201 8eij:A (3.34) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794202 8eij:A (3.34) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794203 8eij:A (3.34) BS04 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794204 8eij:B (3.34) BS01 SAH 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794205 8eij:B (3.34) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794206 8eij:B (3.34) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794207 8eij:B (3.34) BS04 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794208 8eik:A (3.19) BS01 SAH 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794209 8eik:A (3.19) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794210 8eik:A (3.19) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794211 8eik:A (3.19) BS04 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794212 8eik:B (3.19) BS01 SAH 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794213 8eik:B (3.19) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794214 8eik:B (3.19) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794215 8eik:B (3.19) BS04 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794216 8eik:C (3.19) BS01 SAH 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794217 8eik:C (3.19) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794218 8eik:C (3.19) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794219 8eik:C (3.19) BS04 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794220 8eik:E (3.19) BS01 peptide 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794221 8eik:E (3.19) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794222 8eik:E (3.19) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    794223 8eim:A (2.1) BS01 PLP 2.3.1.37 GO:0003870 ... P09950 36807942
    794224 8eim:A (2.1) BS02 PLP 2.3.1.37 GO:0003870 ... P09950 36807942
    794225 8eim:B (2.1) BS01 PLP 2.3.1.37 GO:0003870 ... P09950 36807942
    794226 8ein:A (2.7) BS01 ZN ? GO:0016787 ... Q6FCQ4 36800389
    794227 8ein:B (2.7) BS01 ZN ? GO:0016787 ... Q6FCQ4 36800389
    794228 8ein:C (2.7) BS01 ZN ? GO:0016787 ... Q6FCQ4 36800389
    794229 8ein:D (2.7) BS01 ZN ? GO:0016787 ... Q6FCQ4 36800389
    794230 8ein:D (2.7) BS02 MN ? GO:0016787 ... Q6FCQ4 36800389
    794231 8eio:A (2.8) BS01 peptide 5.6.1.6 GO:0005254 ... P13569 36264792
    794232 8eio:A (2.8) BS02 MG 5.6.1.6 GO:0005254 ... P13569 36264792
    794233 8eio:A (2.8) BS03 MG 5.6.1.6 GO:0005254 ... P13569 36264792
    794234 8eio:A (2.8) BS04 ATP 5.6.1.6 GO:0005254 ... P13569 36264792
    794235 8eio:A (2.8) BS05 ATP 5.6.1.6 GO:0005254 ... P13569 36264792
    794236 8eio:A (2.8) BS06 VX8 5.6.1.6 GO:0005254 ... P13569 36264792
    794237 8eio:A (2.8) BS07 WJX 5.6.1.6 GO:0005254 ... P13569 36264792
    794238 8eip:A (2.24) BS01 7ID ? GO:0016787 ... Q6FCQ4 36800389
    794239 8eip:A (2.24) BS02 ZN ? GO:0016787 ... Q6FCQ4 36800389
    794240 8eip:A (2.24) BS03 MN ? GO:0016787 ... Q6FCQ4 36800389
    794241 8eip:B (2.24) BS01 7ID ? GO:0016787 ... Q6FCQ4 36800389
    794242 8eip:B (2.24) BS02 ZN ? GO:0016787 ... Q6FCQ4 36800389
    794243 8eip:B (2.24) BS03 MN ? GO:0016787 ... Q6FCQ4 36800389
    794244 8eip:C (2.24) BS01 7ID ? GO:0016787 ... Q6FCQ4 36800389
    794245 8eip:C (2.24) BS02 ZN ? GO:0016787 ... Q6FCQ4 36800389
    794246 8eip:C (2.24) BS03 MN ? GO:0016787 ... Q6FCQ4 36800389
    794247 8eip:D (2.24) BS01 7ID ? GO:0016787 ... Q6FCQ4 36800389
    794248 8eip:D (2.24) BS02 ZN ? GO:0016787 ... Q6FCQ4 36800389
    794249 8eip:D (2.24) BS03 MN ? GO:0016787 ... Q6FCQ4 36800389
    794250 8eiq:A (3.0) BS01 peptide 5.6.1.6 GO:0005254 ... P13569 36264792
    794251 8eiq:A (3.0) BS02 MG 5.6.1.6 GO:0005254 ... P13569 36264792
    794252 8eiq:A (3.0) BS03 MG 5.6.1.6 GO:0005254 ... P13569 36264792
    794253 8eiq:A (3.0) BS04 ATP 5.6.1.6 GO:0005254 ... P13569 36264792
    794254 8eiq:A (3.0) BS05 ATP 5.6.1.6 GO:0005254 ... P13569 36264792
    794255 8eiq:A (3.0) BS06 VX7 5.6.1.6 GO:0005254 ... P13569 36264792
    794256 8eiq:A (3.0) BS07 WJX 5.6.1.6 GO:0005254 ... P13569 36264792
    794257 8eiq:A (3.0) BS08 CV6 5.6.1.6 GO:0005254 ... P13569 36264792
    794258 8eir:A (2.49) BS01 peptide 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37044215
    794259 8eir:B (2.49) BS01 peptide 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37044215
    794260 8eis:A (2.62) BS01 DU0 ? GO:0004888 ... A0A0L8FVQ9 37045917
    794261 8eis:A (2.62) BS02 DU0 ? GO:0004888 ... A0A0L8FVQ9 37045917
    794262 8eis:B (2.62) BS01 DU0 ? GO:0004888 ... A0A0L8FVQ9 37045917
    794263 8eis:B (2.62) BS02 DU0 ? GO:0004888 ... A0A0L8FVQ9 37045917
    794264 8eis:C (2.62) BS01 DU0 ? GO:0004888 ... A0A0L8FVQ9 37045917
    794265 8eis:C (2.62) BS02 DU0 ? GO:0004888 ... A0A0L8FVQ9 37045917
    794266 8eis:D (2.62) BS01 DU0 ? GO:0004888 ... A0A0L8FVQ9 37045917
    794267 8eis:D (2.62) BS02 DU0 ? GO:0004888 ... A0A0L8FVQ9 37045917
    794268 8eis:E (2.62) BS01 DU0 ? GO:0004888 ... A0A0L8FVQ9 37045917
    794269 8eis:E (2.62) BS02 DU0 ? GO:0004888 ... A0A0L8FVQ9 37045917
    794270 8eit:R (2.8) BS01 HXA 3.2.1.17 GO:0003796 ... O14842
    P00720
    37216523
    794271 8eiu:0 (2.24) BS01 rna ? GO:0000027 ... P0A7N9 36660825
    794272 8eiu:1 (2.24) BS01 rna ? GO:0002181 ... P0A7P5 36660825
    794273 8eiu:2 (2.24) BS01 rna ? GO:0002181 ... P0A7Q1 36660825
    794274 8eiu:3 (2.24) BS01 rna ? GO:0002181 ... P0A7Q6 36660825
    794275 8eiu:3 (2.24) BS02 ZN ? GO:0002181 ... P0A7Q6 36660825
    794276 8eiu:4 (2.24) BS01 rna ? GO:0002181 ... P0A7M9 36660825
    794277 8eiu:4 (2.24) BS02 ZN ? GO:0002181 ... P0A7M9 36660825
    794278 8eiu:B (2.24) BS01 rna ? GO:0000028 ... P0A7V0 36660825
    794279 8eiu:C (2.24) BS01 rna ? GO:0000028 ... P0A7V3 36660825
    794280 8eiu:D (2.24) BS01 rna ? GO:0000028 ... P0A7V8 36660825
    794281 8eiu:E (2.24) BS01 rna ? GO:0000028 ... P0A7W1 36660825
    794282 8eiu:F (2.24) BS01 rna ? GO:0002181 ... P02358 36660825
    794283 8eiu:G (2.24) BS01 rna ? GO:0000028 ... P02359 36660825
    794284 8eiu:H (2.24) BS01 rna ? GO:0000028 ... P0A7W7 36660825
    794285 8eiu:I (2.24) BS01 rna ? GO:0000049 ... P0A7X3 36660825
    794286 8eiu:I (2.24) BS02 rna ? GO:0000049 ... P0A7X3 36660825
    794287 8eiu:J (2.24) BS01 rna ? GO:0000049 ... P0A7R5 36660825
    794288 8eiu:K (2.24) BS01 rna ? GO:0002181 ... P0A7R9 36660825
    794289 8eiu:L (2.24) BS01 rna ? GO:0000049 ... P0A7S3 36660825
    794290 8eiu:M (2.24) BS01 rna ? GO:0000049 ... P0A7S9 36660825
    794291 8eiu:N (2.24) BS01 rna ? GO:0000028 ... P0AG59 36660825
    794292 8eiu:O (2.24) BS01 rna ? GO:0000028 ... P0ADZ4 36660825
    794293 8eiu:O (2.24) BS02 rna ? GO:0000028 ... P0ADZ4 36660825
    794294 8eiu:P (2.24) BS01 rna ? GO:0000028 ... P0A7T3 36660825
    794295 8eiu:Q (2.24) BS01 rna ? GO:0000028 ... P0AG63 36660825
    794296 8eiu:R (2.24) BS01 rna ? GO:0002181 ... P0A7T7 36660825
    794297 8eiu:S (2.24) BS01 rna ? GO:0000028 ... P0A7U3 36660825
    794298 8eiu:T (2.24) BS01 rna ? GO:0000028 ... P0A7U7 36660825
    794299 8eiu:U (2.24) BS01 rna ? GO:0000028 ... P68679 36660825
    794300 8eiu:c (2.24) BS01 rna ? GO:0000027 ... P60422 36660825
    794301 8eiu:d (2.24) BS01 rna ? GO:0000027 ... P60438 36660825
    794302 8eiu:e (2.24) BS01 rna ? GO:0001070 ... P60723 36660825
    794303 8eiu:f (2.24) BS01 rna ? GO:0000027 ... P62399 36660825
    794304 8eiu:f (2.24) BS02 rna ? GO:0000027 ... P62399 36660825
    794305 8eiu:f (2.24) BS03 rna ? GO:0000027 ... P62399 36660825
    794306 8eiu:g (2.24) BS01 rna ? GO:0000027 ... P0AG55 36660825
    794307 8eiu:h (2.24) BS01 rna ? GO:0002181 ... P0A7R1 36660825
    794308 8eiu:i (2.24) BS01 rna ? GO:0002181 ... P0AA10 36660825
    794309 8eiu:j (2.24) BS01 rna ? GO:0002181 ... P0ADY3 36660825
    794310 8eiu:j (2.24) BS02 rna ? GO:0002181 ... P0ADY3 36660825
    794311 8eiu:k (2.24) BS01 rna ? GO:0002181 ... P02413 36660825
    794312 8eiu:l (2.24) BS01 rna ? GO:0000027 ... P0ADY7 36660825
    794313 8eiu:l (2.24) BS02 rna ? GO:0000027 ... P0ADY7 36660825
    794314 8eiu:l (2.24) BS03 rna ? GO:0000027 ... P0ADY7 36660825
    794315 8eiu:m (2.24) BS01 rna ? GO:0000027 ... P0AG44 36660825
    794316 8eiu:n (2.24) BS01 rna ? GO:0002181 ... P0C018 36660825
    794317 8eiu:n (2.24) BS02 rna ? GO:0002181 ... P0C018 36660825
    794318 8eiu:o (2.24) BS01 rna ? GO:0000027 ... P0A7K6 36660825
    794319 8eiu:o (2.24) BS02 rna ? GO:0000027 ... P0A7K6 36660825
    794320 8eiu:p (2.24) BS01 rna ? GO:0000027 ... P0A7L3 36660825
    794321 8eiu:q (2.24) BS01 rna ? GO:0002181 ... P0AG48 36660825
    794322 8eiu:r (2.24) BS01 rna ? GO:0002181 ... P61175 36660825
    794323 8eiu:s (2.24) BS01 rna ? GO:0000027 ... P0ADZ0 36660825
    794324 8eiu:t (2.24) BS01 rna ? GO:0000027 ... P60624 36660825
    794325 8eiu:u (2.24) BS01 rna ? GO:0000027 ... P68919 36660825
    794326 8eiu:u (2.24) BS02 rna ? GO:0000027 ... P68919 36660825
    794327 8eiu:v (2.24) BS01 rna ? GO:0000027 ... P0A7L8 36660825
    794328 8eiu:v (2.24) BS02 rna ? GO:0000027 ... P0A7L8 36660825
    794329 8eiu:w (2.24) BS01 rna ? GO:0000027 ... P0A7M2 36660825
    794330 8eiu:x (2.24) BS01 rna ? GO:0000027 ... P0A7M6 36660825
    794331 8eiu:y (2.24) BS01 rna ? GO:0000027 ... P0AG51 36660825
    794332 8eiu:y (2.24) BS02 rna ? GO:0000027 ... P0AG51 36660825
    794333 8eiu:z (2.24) BS01 rna ? GO:0000027 ... P0A7N4 36660825
    794334 8eiw:A (1.65) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    794335 8eiw:A (1.65) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    794336 8eiw:A (1.65) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 37563323
    794337 8eiw:A (1.65) BS04 CXF 1.1.1.1 GO:0004022 ... P00327 37563323
    794338 8eiw:B (1.65) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    794339 8eiw:B (1.65) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    794340 8eiw:B (1.65) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 37563323
    794341 8eiw:B (1.65) BS04 CXF 1.1.1.1 GO:0004022 ... P00327 37563323
    794342 8eix:A (2.46) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    794343 8eix:A (2.46) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    794344 8eix:A (2.46) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 37563323
    794345 8eix:A (2.46) BS04 CXF 1.1.1.1 GO:0004022 ... P00327 37563323
    794346 8eix:B (2.46) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    794347 8eix:B (2.46) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    794348 8eix:B (2.46) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 37563323
    794349 8eix:B (2.46) BS04 CXF 1.1.1.1 GO:0004022 ... P00327 37563323
    794350 8eiy:A (2.55) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    794351 8eiy:A (2.55) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    794352 8eiy:A (2.55) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 37563323
    794353 8eiy:B (2.55) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    794354 8eiy:B (2.55) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    794355 8eiy:B (2.55) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 37563323
    794356 8eiy:B (2.55) BS04 CXF 1.1.1.1 GO:0004022 ... P00327 37563323
    794357 8eiz:A (3.13) BS01 WK3 N/A GO:0004888 ... N/A 37045917
    794358 8eiz:B (3.13) BS01 WK3 N/A GO:0004888 ... N/A 37045917
    794359 8eiz:C (3.13) BS01 WK3 N/A GO:0004888 ... N/A 37045917
    794360 8eiz:D (3.13) BS01 WK3 N/A GO:0004888 ... N/A 37045917
    794361 8eiz:E (3.13) BS01 WK3 N/A GO:0004888 ... N/A 37045917
    794362 8ej0:A (2.59) BS01 FES ? GO:0016829 ... A0A4R3LQ44 36385513
    794363 8ej0:A (2.59) BS02 MG ? GO:0016829 ... A0A4R3LQ44 36385513
    794364 8ej0:A (2.59) BS03 BCT ? GO:0016829 ... A0A4R3LQ44 36385513
    794365 8ej0:A (2.59) BS04 BCT ? GO:0016829 ... A0A4R3LQ44 36385513
    794366 8ej0:C (2.59) BS01 FES ? GO:0016829 ... A0A4R3LQ44 36385513
    794367 8ej0:C (2.59) BS02 MG ? GO:0016829 ... A0A4R3LQ44 36385513
    794368 8ej0:C (2.59) BS03 BCT ? GO:0016829 ... A0A4R3LQ44 36385513
    794369 8ej0:E (2.59) BS01 FES ? GO:0016829 ... A0A4R3LQ44 36385513
    794370 8ej0:E (2.59) BS02 MG ? GO:0016829 ... A0A4R3LQ44 36385513
    794371 8ej0:E (2.59) BS03 BCT ? GO:0016829 ... A0A4R3LQ44 36385513
    794372 8ej0:G (2.59) BS01 FES ? GO:0016829 ... A0A4R3LQ44 36385513
    794373 8ej0:G (2.59) BS02 MG ? GO:0016829 ... A0A4R3LQ44 36385513
    794374 8ej3:C (3.13) BS01 dna 2.7.7.6 GO:0000428 ... P9WGY9 36745813
    794375 8ej3:C (3.13) BS02 rna 2.7.7.6 GO:0000428 ... P9WGY9 36745813
    794376 8ej3:C (3.13) BS03 dna 2.7.7.6 GO:0000428 ... P9WGY9 36745813
    794377 8ej3:C (3.13) BS04 G2P 2.7.7.6 GO:0000428 ... P9WGY9 36745813
    794378 8ej3:D (3.13) BS01 dna 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    794379 8ej3:D (3.13) BS02 rna 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    794380 8ej3:D (3.13) BS03 dna 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    794381 8ej3:D (3.13) BS04 MG 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    794382 8ej3:D (3.13) BS05 ZN 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    794383 8ej3:D (3.13) BS06 ZN 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    794384 8ej3:G (3.13) BS01 dna ? GO:0005829 ... Q06795 36745813
    794385 8ej3:G (3.13) BS02 dna ? GO:0005829 ... Q06795 36745813
    794386 8ej4:A (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    794387 8ej4:A (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    794388 8ej4:B (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    794389 8ej4:B (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    794390 8ej4:C (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    794391 8ej4:C (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    794392 8ej4:D (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    794393 8ej4:D (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    794394 8ej4:E (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    794395 8ej4:E (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    794396 8ej4:F (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    794397 8ej4:F (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    794398 8ej4:G (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    794399 8ej4:G (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    794400 8ej4:H (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).