SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    794201 8dml:D (2.08) BS01 JN3 ? N/A Q87GI3 36894018
    794202 8dml:D (2.08) BS02 CA ? N/A Q87GI3 36894018
    794203 8dml:F (2.08) BS01 JN3 ? N/A Q87GI3 36894018
    794204 8dml:F (2.08) BS02 CA ? N/A Q87GI3 36894018
    794205 8dml:H (2.08) BS01 JN3 ? N/A Q87GI3 36894018
    794206 8dml:H (2.08) BS02 CA ? N/A Q87GI3 36894018
    794207 8dmm:A (3.47) BS01 AOV 7.5.2.6 GO:0005524 ... P60752 36435815
    794208 8dmm:A (3.47) BS02 KDL 7.5.2.6 GO:0005524 ... P60752 36435815
    794209 8dmm:A (3.47) BS03 AOV 7.5.2.6 GO:0005524 ... P60752 36435815
    794210 8dmm:A (3.47) BS04 KDL 7.5.2.6 GO:0005524 ... P60752 36435815
    794211 8dmm:B (3.47) BS01 AOV 7.5.2.6 GO:0005524 ... P60752 36435815
    794212 8dmm:B (3.47) BS02 KDL 7.5.2.6 GO:0005524 ... P60752 36435815
    794213 8dmm:B (3.47) BS03 AOV 7.5.2.6 GO:0005524 ... P60752 36435815
    794214 8dmm:B (3.47) BS04 KDL 7.5.2.6 GO:0005524 ... P60752 36435815
    794215 8dmq:A (2.195) BS01 GVE ? N/A Q5ZSJ1 38503748
    794216 8dmr:A (1.86) BS01 AR6 ? N/A Q5ZSJ1 38503748
    794217 8dms:B (2.15) BS01 AR6 ? N/A Q5ZSJ1 38503748
    794218 8dms:B (2.15) BS02 GVE ? N/A Q5ZSJ1 38503748
    794219 8dmt:A (2.28) BS01 AR6 ? GO:0003875 ... Q9W2W5 38503748
    794220 8dmt:B (2.28) BS01 AR6 ? GO:0003875 ... Q9W2W5 38503748
    794221 8dmt:C (2.28) BS01 AR6 ? GO:0003875 ... Q9W2W5 38503748
    794222 8dmt:D (2.28) BS01 AR6 ? GO:0003875 ... Q9W2W5 38503748
    794223 8dmu:A (2.0) BS01 AR6 ? GO:0003875 ... Q9W4J9 38503748
    794224 8dmu:B (2.0) BS01 AR6 ? GO:0003875 ... Q9W4J9 38503748
    794225 8dmu:C (2.0) BS01 AR6 ? GO:0003875 ... Q9W4J9 38503748
    794226 8dmu:D (2.0) BS01 AR6 ? GO:0003875 ... Q9W4J9 38503748
    794227 8dmx:A (3.37) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36790143
    794228 8dmx:B (3.37) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36790143
    794229 8dmx:C (3.37) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36790143
    794230 8dmx:D (3.37) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36790143
    794231 8dmy:A (3.07) BS01 ADP 3.6.4.- GO:0005200 ... Q3ZC07 36790143
    794232 8dmy:B (3.07) BS01 ADP 3.6.4.- GO:0005200 ... Q3ZC07 36790143
    794233 8dmy:C (3.07) BS01 ADP 3.6.4.- GO:0005200 ... Q3ZC07 36790143
    794234 8dmy:D (3.07) BS01 ADP 3.6.4.- GO:0005200 ... Q3ZC07 36790143
    794235 8dn0:A (1.57) BS01 SW0 ? GO:0003756 ... P0AEG4 N/A
    794236 8dn0:B (1.57) BS01 SW0 ? GO:0003756 ... P0AEG4 N/A
    794237 8dn1:A (1.32) BS01 RH6 ? GO:0001523 ... P50120 36722993
    794238 8dn2:A (3.9) BS01 GLY ? GO:0004888 ... P23415 37821459
    794239 8dn2:C (3.9) BS01 GLY ? GO:0004888 ... P23415 37821459
    794240 8dn2:D (3.9) BS01 GLY ? GO:0004888 ... P23415 37821459
    794241 8dn5:A (3.63) BS01 GLY ? GO:0004888 ... P23415 37821459
    794242 8dn5:B (3.63) BS01 GLY ? GO:0004888 ... P23415 37821459
    794243 8dn5:B (3.63) BS02 GLY ? GO:0004888 ... P23415 37821459
    794244 8dn5:C (3.63) BS01 GLY ? GO:0004888 ... P23415 37821459
    794245 8dn5:C (3.63) BS02 GLY ? GO:0004888 ... P23415 37821459
    794246 8dn5:D (3.63) BS01 GLY ? GO:0004888 ... P23415 37821459
    794247 8dn5:E (3.63) BS01 GLY ? GO:0004888 ... P42212
    P48167
    37821459
    794248 8dn5:E (3.63) BS02 GLY ? GO:0004888 ... P42212
    P48167
    37821459
    794249 8dn8:A (3.7) BS01 U90 ? GO:0005515 ... O67181 36064941
    794250 8dn8:C (3.7) BS01 U90 ? GO:0005515 ... O67181 36064941
    794251 8dnc:A (3.3) BS01 UBO ? GO:0005515 ... O67181 36064941
    794252 8dnc:A (3.3) BS02 UBH ? GO:0005515 ... O67181 36064941
    794253 8dnc:A (3.3) BS03 ADP ? GO:0005515 ... O67181 36064941
    794254 8dnd:A (2.018) BS01 VRD ? GO:0004623 ... P58399 36403756
    794255 8dnd:A (2.018) BS02 VRD ? GO:0004623 ... P58399 36403756
    794256 8dnd:B (2.018) BS01 VRD ? GO:0004623 ... P58399 36403756
    794257 8dnd:B (2.018) BS02 VRD ? GO:0004623 ... P58399 36403756
    794258 8dne:A (3.5) BS01 ATP ? GO:0005515 ... O67181 36064941
    794259 8dne:A (3.5) BS02 ATP ? GO:0005515 ... O67181 36064941
    794260 8dne:C (3.5) BS01 ATP ? GO:0005515 ... O67181 36064941
    794261 8dne:C (3.5) BS02 ATP ? GO:0005515 ... O67181 36064941
    794262 8dnf:A (3.38) BS01 ADP 3.6.4.- GO:0001525 ... P63261 36790143
    794263 8dnf:B (3.38) BS01 ADP 3.6.4.- GO:0001525 ... P63261 36790143
    794264 8dnf:C (3.38) BS01 ADP 3.6.4.- GO:0001525 ... P63261 36790143
    794265 8dnf:D (3.38) BS01 ADP 3.6.4.- GO:0001525 ... P63261 36790143
    794266 8dnh:A (2.99) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36790143
    794267 8dnh:B (2.99) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36790143
    794268 8dnh:C (2.99) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36790143
    794269 8dnh:D (2.99) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36790143
    794270 8dni:A (1.5) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 35930206
    794271 8dni:A (1.5) BS02 U4L 3.6.5.2 GO:0003924 ... P01116 35930206
    794272 8dnj:A (1.81) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 35930206
    794273 8dnj:A (1.81) BS02 U4U 3.6.5.2 GO:0003924 ... P01116 35930206
    794274 8dnj:B (1.81) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 35930206
    794275 8dnj:B (1.81) BS02 U4U 3.6.5.2 GO:0003924 ... P01116 35930206
    794276 8dnj:C (1.81) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 35930206
    794277 8dnj:C (1.81) BS02 U4U 3.6.5.2 GO:0003924 ... P01116 35930206
    794278 8dnk:A (2.23) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 35930206
    794279 8dnk:A (2.23) BS02 U50 3.6.5.2 GO:0003924 ... P01116 35930206
    794280 8dnp:A (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794281 8dnp:B (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794282 8dnp:C (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794283 8dnp:D (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794284 8dnp:E (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794285 8dnp:F (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794286 8dnp:G (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794287 8dnp:H (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794288 8dnp:I (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794289 8dnp:J (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794290 8dnp:K (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794291 8dnp:L (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794292 8dnp:M (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794293 8dnp:N (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794294 8dnp:O (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794295 8dnp:P (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794296 8dnp:Q (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794297 8dnp:R (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794298 8dnp:S (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794299 8dnp:T (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794300 8dnp:U (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794301 8dnp:V (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794302 8dnp:W (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794303 8dnp:X (2.69) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36450447
    794304 8dnq:A (1.84) BS01 peptide ? N/A P25440 37269828
    794305 8dnq:B (1.84) BS01 peptide ? N/A P25440 37269828
    794306 8dnt:A (3.18) BS01 peptide N/A N/A N/A 37872153
    794307 8dnt:B (3.18) BS01 peptide N/A N/A N/A 37872153
    794308 8dnt:E (3.18) BS01 peptide ? N/A U5YKE0 37872153
    794309 8dnt:H (3.18) BS01 peptide N/A N/A N/A 37872153
    794310 8dnt:I (3.18) BS01 peptide N/A N/A N/A 37872153
    794311 8dnt:K (3.18) BS01 peptide ? N/A U5YKE0 37872153
    794312 8dnt:M (3.18) BS01 peptide N/A N/A N/A 37872153
    794313 8dnt:P (3.18) BS01 peptide N/A N/A N/A 37872153
    794314 8dnt:R (3.18) BS01 peptide ? N/A U5YKE0 37872153
    794315 8dnt:V (3.18) BS01 peptide N/A N/A N/A 37872153
    794316 8dnt:W (3.18) BS01 peptide N/A N/A N/A 37872153
    794317 8dnt:Y (3.18) BS01 peptide ? N/A U5YKE0 37872153
    794318 8dnu:A (2.73) BS01 MN 2.3.1.225
    6.3.1.2
    GO:0003824 ... P15104 36450447
    794319 8dnx:A (2.98) BS01 peptide ? GO:0005048 ... P61619 37169959
    794320 8dny:A (2.85) BS01 peptide ? GO:0005048 ... P61619 37169959
    794321 8dnz:A (2.57) BS01 peptide ? GO:0005048 ... P61619 37169959
    794322 8do0:A (2.86) BS01 Q6B ? GO:0005048 ... P61619 37169959
    794323 8do1:A (3.01) BS01 SXF ? GO:0005048 ... P61619 37169959
    794324 8do2:A (2.95) BS01 SXU ? GO:0005048 ... P61619 37169959
    794325 8do3:A (3.22) BS01 SWR ? GO:0005048 ... P61619 37169959
    794326 8do5:A (2.1) BS01 KRN ? GO:0008840 ... A0ACD6B9B3 36522814
    794327 8do5:B (2.1) BS01 KRN ? GO:0008840 ... A0ACD6B9B3 36522814
    794328 8do6:B (3.1) BS01 rna ? N/A Q5HK92 37352230
    794329 8do6:B (3.1) BS02 rna ? N/A Q5HK92 37352230
    794330 8do6:C (3.1) BS01 rna ? N/A A0A2R3SZR9 37352230
    794331 8do6:D (3.1) BS01 rna ? N/A A0A2R3SZR9 37352230
    794332 8do6:E (3.1) BS01 rna ? N/A Q5HK91 37352230
    794333 8do6:E (3.1) BS02 rna ? N/A Q5HK91 37352230
    794334 8do6:F (3.1) BS01 rna ? N/A Q5HK91 37352230
    794335 8do6:F (3.1) BS02 rna ? N/A Q5HK91 37352230
    794336 8do6:G (3.1) BS01 rna ? N/A Q5HK91 37352230
    794337 8do6:G (3.1) BS02 rna ? N/A Q5HK91 37352230
    794338 8do6:H (3.1) BS01 rna ? N/A Q5HK93 37352230
    794339 8do6:H (3.1) BS02 rna ? N/A Q5HK93 37352230
    794340 8do8:A (2.41) BS01 peptide ? GO:0000045 ... Q9BSB4 36791199
    794341 8do8:B (2.41) BS01 peptide ? GO:0000045 ... O75143 36791199
    794342 8do8:C (2.41) BS01 peptide ? GO:0000045 ... Q9BSB4 36791199
    794343 8do8:D (2.41) BS01 peptide ? GO:0000045 ... O75143 36791199
    794344 8doc:A (2.1) BS01 FE2 3.1.1.64
    5.3.3.22
    GO:0001523 ... Q28175 37279401
    794345 8doc:A (2.1) BS02 SYL 3.1.1.64
    5.3.3.22
    GO:0001523 ... Q28175 37279401
    794346 8dof:A (2.6) BS01 T4L 6.3.2.8 GO:0005524 ... Q9HW02 N/A
    794347 8dog:A (1.48) BS01 HEM ? GO:0019825 ... Q9NAV7 36272837
    794348 8dog:A (1.48) BS02 H48 ? GO:0019825 ... Q9NAV7 36272837
    794349 8dog:B (1.48) BS01 HEM ? GO:0019825 ... Q9NAV7 36272837
    794350 8dog:B (1.48) BS02 H48 ? GO:0019825 ... Q9NAV7 36272837
    794351 8doh:A (1.75) BS01 HEM ? GO:0019825 ... Q9NAV7 36272837
    794352 8doh:A (1.75) BS02 T0U ? GO:0019825 ... Q9NAV7 36272837
    794353 8doh:B (1.75) BS01 HEM ? GO:0019825 ... Q9NAV7 36272837
    794354 8doh:B (1.75) BS02 T0U ? GO:0019825 ... Q9NAV7 36272837
    794355 8doi:A (1.93) BS01 HEM ? GO:0019825 ... Q9NAV7 36272837
    794356 8doi:A (1.93) BS02 5VL ? GO:0019825 ... Q9NAV7 36272837
    794357 8doi:B (1.93) BS01 HEM ? GO:0019825 ... Q9NAV7 36272837
    794358 8doi:B (1.93) BS02 5VL ? GO:0019825 ... Q9NAV7 36272837
    794359 8doj:A (1.3) BS01 HEM ? GO:0019825 ... Q9NAV7 36272837
    794360 8doj:A (1.3) BS02 T1I ? GO:0019825 ... Q9NAV7 36272837
    794361 8doj:B (1.3) BS01 HEM ? GO:0019825 ... Q9NAV7 36272837
    794362 8dok:C (3.2) BS01 BMA N/A N/A N/A 37872202
    794363 8dok:C (3.2) BS02 MAN N/A N/A N/A 37872202
    794364 8dok:C (3.2) BS03 MAN N/A N/A N/A 37872202
    794365 8dok:C (3.2) BS04 MAN N/A N/A N/A 37872202
    794366 8dok:D (3.2) BS01 BMA N/A N/A N/A 37872202
    794367 8dok:G (3.2) BS01 BMA N/A N/A N/A 37872202
    794368 8dok:G (3.2) BS02 MAN N/A N/A N/A 37872202
    794369 8dok:G (3.2) BS03 MAN N/A N/A N/A 37872202
    794370 8dok:K (3.2) BS01 BMA N/A N/A N/A 37872202
    794371 8dok:K (3.2) BS02 MAN N/A N/A N/A 37872202
    794372 8dok:K (3.2) BS03 MAN N/A N/A N/A 37872202
    794373 8dok:K (3.2) BS04 MAN N/A N/A N/A 37872202
    794374 8dok:L (3.2) BS01 BMA N/A N/A N/A 37872202
    794375 8dor:A (1.35) BS01 FMN ? GO:0005829 ... A6T5Y2 38990055
    794376 8dor:A (1.35) BS02 FMN ? GO:0005829 ... A6T5Y2 38990055
    794377 8dor:B (1.35) BS01 FMN ? GO:0005829 ... A6T5Y2 38990055
    794378 8dor:B (1.35) BS02 FMN ? GO:0005829 ... A6T5Y2 38990055
    794379 8dor:C (1.35) BS01 FMN ? GO:0005829 ... A6T5Y2 38990055
    794380 8dor:C (1.35) BS02 FMN ? GO:0005829 ... A6T5Y2 38990055
    794381 8dor:D (1.35) BS01 FMN ? GO:0005829 ... A6T5Y2 38990055
    794382 8dor:D (1.35) BS02 FMN ? GO:0005829 ... A6T5Y2 38990055
    794383 8dos:A (1.872) BS01 FAD 1.18.1.2
    1.19.1.1
    GO:0004324 ... A0A0G3NED2 N/A
    794384 8dos:A (1.872) BS02 NAP 1.18.1.2
    1.19.1.1
    GO:0004324 ... A0A0G3NED2 N/A
    794385 8dos:B (1.872) BS01 FAD 1.18.1.2
    1.19.1.1
    GO:0004324 ... A0A0G3NED2 N/A
    794386 8dos:B (1.872) BS02 NAP 1.18.1.2
    1.19.1.1
    GO:0004324 ... A0A0G3NED2 N/A
    794387 8dou:A (3.54) BS01 ADP ? GO:0005515 ... O67181 36064941
    794388 8dou:C (3.54) BS01 ADP ? GO:0005515 ... O67181 36064941
    794389 8dov:A (2.1) BS01 HEM ? GO:0004601 ... P69905 36693107
    794390 8dov:B (2.1) BS01 HEM ? GO:0004601 ... P68871 36693107
    794391 8dov:C (2.1) BS01 HEM ? GO:0004601 ... P69905 36693107
    794392 8dov:D (2.1) BS01 HEM ? GO:0004601 ... P68871 36693107
    794393 8dov:E (2.1) BS01 HEM ? GO:0004601 ... P69905 36693107
    794394 8dov:F (2.1) BS01 HEM ? GO:0004601 ... P68871 36693107
    794395 8dov:G (2.1) BS01 HEM ? GO:0004601 ... P69905 36693107
    794396 8dov:H (2.1) BS01 HEM ? GO:0004601 ... P68871 36693107
    794397 8dov:I (2.1) BS01 HEM ? N/A Q99YA0 36693107
    794398 8dov:J (2.1) BS01 HEM ? N/A Q99YA0 36693107
    794399 8dov:K (2.1) BS01 HEM ? N/A Q99YA0 36693107
    794400 8dow:C (3.69) BS01 MAN N/A N/A N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).