SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    794401 8ej4:H (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    794402 8ej4:I (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    794403 8ej4:I (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    794404 8ej4:J (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    794405 8ej4:J (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    794406 8ej6:F (1.39) BS01 dna ? GO:0003700 ... P17947 37352101
    794407 8ej6:F (1.39) BS02 dna ? GO:0003700 ... P17947 37352101
    794408 8ej8:F (1.45) BS01 dna ? GO:0003700 ... P17947 37352101
    794409 8ej8:F (1.45) BS02 dna ? GO:0003700 ... P17947 37352101
    794410 8ejb:A (1.58) BS01 WKC 2.7.10.2 GO:0004672 ... Q06187 36375120
    794411 8ejc:R (3.0) BS01 2YB ? GO:0003796 ... O14842 37216523
    794412 8ejd:a (3.8) BS01 MAN ? GO:0016829 ... P08669 37209096
    794413 8ejd:b (3.8) BS01 MAN ? GO:0016829 ... P08669 37209096
    794414 8ejd:c (3.8) BS01 MAN ? GO:0016829 ... P08669 37209096
    794415 8ejh:H (3.71) BS01 MAN N/A N/A N/A 37209096
    794416 8ejh:J (3.71) BS01 MAN N/A N/A N/A 37209096
    794417 8ejh:h (3.71) BS01 MAN N/A N/A N/A 37209096
    794418 8eji:A (3.81) BS01 MAN ? GO:0019031 ... P08669 37209096
    794419 8ejj:A (3.22) BS01 MAN ? GO:0019031 ... P08669 37209096
    794420 8ejj:B (3.22) BS01 MAN ? GO:0019031 ... P08669 37209096
    794421 8ejj:C (3.22) BS01 MAN ? GO:0019031 ... P08669 37209096
    794422 8ejk:R (3.4) BS01 2YB ? GO:0003796 ... O14842 37216523
    794423 8ejl:L (3.9) BS01 peptide ? GO:0016032 ... P12493 36759579
    794424 8ejl:L (3.9) BS02 peptide ? GO:0016032 ... P12493 36759579
    794425 8ejl:M (3.9) BS01 peptide ? GO:0016032 ... P12493 36759579
    794426 8ejm:A (1.8) BS01 ADP 3.6.4.13 GO:0003676 ... O43143 36459648
    794427 8ejn:A (1.481) BS01 HEM ? GO:0004601 ... Q9NAV8 37480762
    794428 8ejn:A (1.481) BS02 5JC ? GO:0004601 ... Q9NAV8 37480762
    794429 8ejn:B (1.481) BS01 HEM ? GO:0004601 ... Q9NAV8 37480762
    794430 8ejn:B (1.481) BS02 5JC ? GO:0004601 ... Q9NAV8 37480762
    794431 8ejo:A (2.67) BS01 dna ? GO:0003677 ... A0A6I8NF41 37744032
    794432 8ejo:A (2.67) BS02 dna ? GO:0003677 ... A0A6I8NF41 37744032
    794433 8ejo:B (2.67) BS01 dna ? GO:0003677 ... A0A6I8NF41 37744032
    794434 8ejo:B (2.67) BS02 dna ? GO:0003677 ... A0A6I8NF41 37744032
    794435 8ejp:A (2.174) BS01 dna ? GO:0003677 ... A0A6I8NF41 37744032
    794436 8ejp:A (2.174) BS02 dna ? GO:0003677 ... A0A6I8NF41 37744032
    794437 8ejp:B (2.174) BS01 dna ? GO:0003677 ... A0A6I8NF41 37744032
    794438 8ejp:B (2.174) BS02 dna ? GO:0003677 ... A0A6I8NF41 37744032
    794439 8ejr:B (2.08) BS01 peptide ? N/A Q14145 N/A
    794440 8ejs:B (2.82) BS01 peptide ? N/A Q14145 N/A
    794441 8eju:A (1.74) BS01 SEY ? GO:0000976 ... Q88N41 N/A
    794442 8eju:A (1.74) BS02 SEY ? GO:0000976 ... Q88N41 N/A
    794443 8eju:B (1.74) BS01 SEY ? GO:0000976 ... Q88N41 N/A
    794444 8eju:B (1.74) BS02 SEY ? GO:0000976 ... Q88N41 N/A
    794445 8eju:B (1.74) BS03 SEY ? GO:0000976 ... Q88N41 N/A
    794446 8ejx:A (1.65) BS01 9JT 5.2.1.8 GO:0000413 ... P30405 38146639
    794447 8ek1:A (3.6) BS01 peptide N/A N/A N/A 36931276
    794448 8ek1:B (3.6) BS01 peptide N/A N/A N/A 36931276
    794449 8ek1:D (3.6) BS01 peptide N/A N/A N/A 36931276
    794450 8ek1:L (3.6) BS01 peptide N/A N/A N/A 36931276
    794451 8ek3:F (1.38) BS01 dna ? GO:0003700 ... P17947 37352101
    794452 8ek3:F (1.38) BS02 dna ? GO:0003700 ... P17947 37352101
    794453 8ek5:A (2.11) BS01 peptide ? N/A F6IR24 38039376
    794454 8ek5:E (2.11) BS01 peptide N/A N/A N/A 38039376
    794455 8ek7:C (1.65) BS01 MG N/A GO:0004590 ... N/A N/A
    794456 8ek7:E (1.65) BS01 MG N/A GO:0004590 ... N/A N/A
    794457 8ek8:E (2.63) BS01 dna ? GO:0003700 ... P17947 37352101
    794458 8ek8:E (2.63) BS02 dna ? GO:0003700 ... P17947 37352101
    794459 8ek8:F (2.63) BS01 dna ? GO:0003700 ... P17947 37352101
    794460 8ek8:F (2.63) BS02 dna ? GO:0003700 ... P17947 37352101
    794461 8ek9:A (1.4) BS01 NXL 3.5.2.6 GO:0008800 ... A0A1W0D7S2 37272821
    794462 8eka:A (3.7) BS01 peptide N/A N/A N/A 36931276
    794463 8eka:B (3.7) BS01 peptide N/A N/A N/A 36931276
    794464 8eka:C (3.7) BS01 peptide N/A N/A N/A 36931276
    794465 8eka:D (3.7) BS01 peptide N/A N/A N/A 36931276
    794466 8eka:L (3.7) BS01 peptide N/A N/A N/A 36931276
    794467 8ekb:10 (2.7) BS01 rna ? GO:0003735 ... P60493 36546783
    794468 8ekb:10 (2.7) BS02 rna ? GO:0003735 ... P60493 36546783
    794469 8ekb:10 (2.7) BS03 MG ? GO:0003735 ... P60493 36546783
    794470 8ekb:10 (2.7) BS04 MG ? GO:0003735 ... P60493 36546783
    794471 8ekb:10 (2.7) BS05 MG ? GO:0003735 ... P60493 36546783
    794472 8ekb:11 (2.7) BS01 rna ? GO:0003735 ... P60494 36546783
    794473 8ekb:11 (2.7) BS02 MG ? GO:0003735 ... P60494 36546783
    794474 8ekb:12 (2.7) BS01 rna ? GO:0003735 ... Q5SHP6 36546783
    794475 8ekb:12 (2.7) BS02 MG ? GO:0003735 ... Q5SHP6 36546783
    794476 8ekb:13 (2.7) BS01 rna ? GO:0003735 ... Q5SHQ6 36546783
    794477 8ekb:13 (2.7) BS02 rna ? GO:0003735 ... Q5SHQ6 36546783
    794478 8ekb:13 (2.7) BS03 MG ? GO:0003735 ... Q5SHQ6 36546783
    794479 8ekb:14 (2.7) BS01 rna ? GO:0003735 ... Q5SJE1 36546783
    794480 8ekb:14 (2.7) BS02 ZN ? GO:0003735 ... Q5SJE1 36546783
    794481 8ekb:15 (2.7) BS01 rna ? GO:0003735 ... P80339 36546783
    794482 8ekb:15 (2.7) BS02 ZN ? GO:0003735 ... P80339 36546783
    794483 8ekb:16 (2.7) BS01 rna ? GO:0000049 ... P35871 36546783
    794484 8ekb:16 (2.7) BS02 MG ? GO:0000049 ... P35871 36546783
    794485 8ekb:16 (2.7) BS03 ZN ? GO:0000049 ... P35871 36546783
    794486 8ekb:17 (2.7) BS01 rna ? GO:0003735 ... P80340 36546783
    794487 8ekb:17 (2.7) BS02 MG ? GO:0003735 ... P80340 36546783
    794488 8ekb:17 (2.7) BS03 MG ? GO:0003735 ... P80340 36546783
    794489 8ekb:17 (2.7) BS04 MG ? GO:0003735 ... P80340 36546783
    794490 8ekb:18 (2.7) BS01 rna ? GO:0003735 ... Q5SKU1 36546783
    794491 8ekb:18 (2.7) BS02 MG ? GO:0003735 ... Q5SKU1 36546783
    794492 8ekb:18 (2.7) BS03 MG ? GO:0003735 ... Q5SKU1 36546783
    794493 8ekb:18 (2.7) BS04 MG ? GO:0003735 ... Q5SKU1 36546783
    794494 8ekb:19 (2.7) BS01 rna ? GO:0003735 ... Q5SHR2 36546783
    794495 8ekb:19 (2.7) BS02 ZN ? GO:0003735 ... Q5SHR2 36546783
    794496 8ekb:1D (2.7) BS01 rna ? GO:0002181 ... P60405 36546783
    794497 8ekb:1D (2.7) BS02 rna ? GO:0002181 ... P60405 36546783
    794498 8ekb:1D (2.7) BS03 MG ? GO:0002181 ... P60405 36546783
    794499 8ekb:1D (2.7) BS04 MG ? GO:0002181 ... P60405 36546783
    794500 8ekb:1D (2.7) BS05 MG ? GO:0002181 ... P60405 36546783
    794501 8ekb:1D (2.7) BS06 MG ? GO:0002181 ... P60405 36546783
    794502 8ekb:1D (2.7) BS07 MG ? GO:0002181 ... P60405 36546783
    794503 8ekb:1D (2.7) BS08 MG ? GO:0002181 ... P60405 36546783
    794504 8ekb:1D (2.7) BS09 MG ? GO:0002181 ... P60405 36546783
    794505 8ekb:1D (2.7) BS10 MG ? GO:0002181 ... P60405 36546783
    794506 8ekb:1D (2.7) BS11 MG ? GO:0002181 ... P60405 36546783
    794507 8ekb:1D (2.7) BS12 MG ? GO:0002181 ... P60405 36546783
    794508 8ekb:1D (2.7) BS13 MG ? GO:0002181 ... P60405 36546783
    794509 8ekb:1E (2.7) BS01 rna ? GO:0003735 ... Q5SHN8 36546783
    794510 8ekb:1E (2.7) BS02 MG ? GO:0003735 ... Q5SHN8 36546783
    794511 8ekb:1E (2.7) BS03 MG ? GO:0003735 ... Q5SHN8 36546783
    794512 8ekb:1E (2.7) BS04 MG ? GO:0003735 ... Q5SHN8 36546783
    794513 8ekb:1E (2.7) BS05 MG ? GO:0003735 ... Q5SHN8 36546783
    794514 8ekb:1E (2.7) BS06 MG ? GO:0003735 ... Q5SHN8 36546783
    794515 8ekb:1F (2.7) BS01 rna ? GO:0003735 ... Q5SHN9 36546783
    794516 8ekb:1F (2.7) BS02 MG ? GO:0003735 ... Q5SHN9 36546783
    794517 8ekb:1F (2.7) BS03 MG ? GO:0003735 ... Q5SHN9 36546783
    794518 8ekb:1F (2.7) BS04 MG ? GO:0003735 ... Q5SHN9 36546783
    794519 8ekb:1F (2.7) BS05 MG ? GO:0003735 ... Q5SHN9 36546783
    794520 8ekb:1F (2.7) BS06 MG ? GO:0003735 ... Q5SHN9 36546783
    794521 8ekb:1F (2.7) BS07 MG ? GO:0003735 ... Q5SHN9 36546783
    794522 8ekb:1F (2.7) BS08 MG ? GO:0003735 ... Q5SHN9 36546783
    794523 8ekb:1G (2.7) BS01 rna ? GO:0000049 ... Q5SHQ0 36546783
    794524 8ekb:1G (2.7) BS02 rna ? GO:0000049 ... Q5SHQ0 36546783
    794525 8ekb:1G (2.7) BS03 rna ? GO:0000049 ... Q5SHQ0 36546783
    794526 8ekb:1G (2.7) BS04 MG ? GO:0000049 ... Q5SHQ0 36546783
    794527 8ekb:1G (2.7) BS05 MG ? GO:0000049 ... Q5SHQ0 36546783
    794528 8ekb:1H (2.7) BS01 rna ? GO:0002181 ... P0DOY8 36546783
    794529 8ekb:1I (2.7) BS01 rna ? GO:0003735 ... Q5SLQ1 36546783
    794530 8ekb:1I (2.7) BS02 MG ? GO:0003735 ... Q5SLQ1 36546783
    794531 8ekb:1N (2.7) BS01 rna ? GO:0003729 ... P60488 36546783
    794532 8ekb:1N (2.7) BS02 MG ? GO:0003729 ... P60488 36546783
    794533 8ekb:1N (2.7) BS03 MG ? GO:0003729 ... P60488 36546783
    794534 8ekb:1N (2.7) BS04 MG ? GO:0003729 ... P60488 36546783
    794535 8ekb:1O (2.7) BS01 rna ? GO:0003735 ... Q5SHP8 36546783
    794536 8ekb:1O (2.7) BS02 rna ? GO:0003735 ... Q5SHP8 36546783
    794537 8ekb:1O (2.7) BS03 MG ? GO:0003735 ... Q5SHP8 36546783
    794538 8ekb:1P (2.7) BS01 rna ? GO:0003735 ... Q5SHQ7 36546783
    794539 8ekb:1P (2.7) BS02 MG ? GO:0003735 ... Q5SHQ7 36546783
    794540 8ekb:1P (2.7) BS03 MG ? GO:0003735 ... Q5SHQ7 36546783
    794541 8ekb:1P (2.7) BS04 MG ? GO:0003735 ... Q5SHQ7 36546783
    794542 8ekb:1P (2.7) BS05 MG ? GO:0003735 ... Q5SHQ7 36546783
    794543 8ekb:1P (2.7) BS06 MG ? GO:0003735 ... Q5SHQ7 36546783
    794544 8ekb:1P (2.7) BS07 MG ? GO:0003735 ... Q5SHQ7 36546783
    794545 8ekb:1Q (2.7) BS01 rna ? GO:0000049 ... P60489 36546783
    794546 8ekb:1Q (2.7) BS02 rna ? GO:0000049 ... P60489 36546783
    794547 8ekb:1Q (2.7) BS03 MG ? GO:0000049 ... P60489 36546783
    794548 8ekb:1Q (2.7) BS04 MG ? GO:0000049 ... P60489 36546783
    794549 8ekb:1Q (2.7) BS05 MG ? GO:0000049 ... P60489 36546783
    794550 8ekb:1Q (2.7) BS06 MG ? GO:0000049 ... P60489 36546783
    794551 8ekb:1Q (2.7) BS07 MG ? GO:0000049 ... P60489 36546783
    794552 8ekb:1R (2.7) BS01 rna ? GO:0003735 ... Q9Z9H5 36546783
    794553 8ekb:1R (2.7) BS02 MG ? GO:0003735 ... Q9Z9H5 36546783
    794554 8ekb:1S (2.7) BS01 rna ? GO:0003735 ... Q5SHQ4 36546783
    794555 8ekb:1S (2.7) BS02 rna ? GO:0003735 ... Q5SHQ4 36546783
    794556 8ekb:1S (2.7) BS03 MG ? GO:0003735 ... Q5SHQ4 36546783
    794557 8ekb:1S (2.7) BS04 MG ? GO:0003735 ... Q5SHQ4 36546783
    794558 8ekb:1T (2.7) BS01 rna ? GO:0003735 ... P60490 36546783
    794559 8ekb:1T (2.7) BS02 rna ? GO:0003735 ... P60490 36546783
    794560 8ekb:1T (2.7) BS03 MG ? GO:0003735 ... P60490 36546783
    794561 8ekb:1U (2.7) BS01 rna ? GO:0000027 ... P60491 36546783
    794562 8ekb:1U (2.7) BS02 MG ? GO:0000027 ... P60491 36546783
    794563 8ekb:1U (2.7) BS03 MG ? GO:0000027 ... P60491 36546783
    794564 8ekb:1U (2.7) BS04 MG ? GO:0000027 ... P60491 36546783
    794565 8ekb:1U (2.7) BS05 MG ? GO:0000027 ... P60491 36546783
    794566 8ekb:1U (2.7) BS06 MG ? GO:0000027 ... P60491 36546783
    794567 8ekb:1U (2.7) BS07 MG ? GO:0000027 ... P60491 36546783
    794568 8ekb:1U (2.7) BS08 MG ? GO:0000027 ... P60491 36546783
    794569 8ekb:1V (2.7) BS01 rna ? GO:0003723 ... P60492 36546783
    794570 8ekb:1V (2.7) BS02 MG ? GO:0003723 ... P60492 36546783
    794571 8ekb:1V (2.7) BS03 MG ? GO:0003723 ... P60492 36546783
    794572 8ekb:1V (2.7) BS04 MG ? GO:0003723 ... P60492 36546783
    794573 8ekb:1V (2.7) BS05 MG ? GO:0003723 ... P60492 36546783
    794574 8ekb:1V (2.7) BS06 MG ? GO:0003723 ... P60492 36546783
    794575 8ekb:1V (2.7) BS07 MG ? GO:0003723 ... P60492 36546783
    794576 8ekb:1V (2.7) BS08 MG ? GO:0003723 ... P60492 36546783
    794577 8ekb:1W (2.7) BS01 rna ? GO:0003735 ... Q5SHP3 36546783
    794578 8ekb:1W (2.7) BS02 MG ? GO:0003735 ... Q5SHP3 36546783
    794579 8ekb:1W (2.7) BS03 MG ? GO:0003735 ... Q5SHP3 36546783
    794580 8ekb:1W (2.7) BS04 MG ? GO:0003735 ... Q5SHP3 36546783
    794581 8ekb:1W (2.7) BS05 MG ? GO:0003735 ... Q5SHP3 36546783
    794582 8ekb:1W (2.7) BS06 MG ? GO:0003735 ... Q5SHP3 36546783
    794583 8ekb:1X (2.7) BS01 rna ? GO:0003735 ... Q5SHP0 36546783
    794584 8ekb:1X (2.7) BS02 MG ? GO:0003735 ... Q5SHP0 36546783
    794585 8ekb:1X (2.7) BS03 MG ? GO:0003735 ... Q5SHP0 36546783
    794586 8ekb:1X (2.7) BS04 MG ? GO:0003735 ... Q5SHP0 36546783
    794587 8ekb:1X (2.7) BS05 MG ? GO:0003735 ... Q5SHP0 36546783
    794588 8ekb:1X (2.7) BS06 MG ? GO:0003735 ... Q5SHP0 36546783
    794589 8ekb:1Y (2.7) BS01 rna ? GO:0003723 ... Q5SHP9 36546783
    794590 8ekb:1Y (2.7) BS02 MG ? GO:0003723 ... Q5SHP9 36546783
    794591 8ekb:1Y (2.7) BS03 ZN ? GO:0003723 ... Q5SHP9 36546783
    794592 8ekb:1Z (2.7) BS01 rna ? GO:0003723 ... Q5SHZ1 36546783
    794593 8ekb:1Z (2.7) BS02 rna ? GO:0003723 ... Q5SHZ1 36546783
    794594 8ekb:1b (2.7) BS01 rna ? GO:0003735 ... P80371 36546783
    794595 8ekb:1b (2.7) BS02 MG ? GO:0003735 ... P80371 36546783
    794596 8ekb:1c (2.7) BS01 rna ? GO:0003676 ... P80372 36546783
    794597 8ekb:1d (2.7) BS01 rna ? GO:0003723 ... P80373 36546783
    794598 8ekb:1d (2.7) BS02 SF4 ? GO:0003723 ... P80373 36546783
    794599 8ekb:1e (2.7) BS01 rna ? GO:0003723 ... Q5SHQ5 36546783
    794600 8ekb:1f (2.7) BS01 rna ? GO:0003735 ... Q5SLP8 36546783

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).