SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    794801 8drp:D (2.84) BS01 CFF ? GO:0003151 ... P11716 37224245
    794802 8drp:D (2.84) BS02 ATP ? GO:0003151 ... P11716 37224245
    794803 8drp:D (2.84) BS03 ZN ? GO:0003151 ... P11716 37224245
    794804 8ds7:H (1.88) BS01 peptide N/A N/A N/A N/A
    794805 8ds7:L (1.88) BS01 peptide N/A N/A N/A N/A
    794806 8ds8:A (1.84) BS01 peptide ? GO:0003682 ... O15417 37938770
    794807 8ds8:B (1.84) BS01 peptide ? GO:0003682 ... O15417 37938770
    794808 8dsc:A (1.321) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    794809 8dsc:A (1.321) BS02 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    794810 8dsc:A (1.321) BS03 TIE 2.4.2.12 GO:0005125 ... P43490 36746631
    794811 8dsc:A (1.321) BS04 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    794812 8dsc:B (1.321) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    794813 8dsc:B (1.321) BS02 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    794814 8dsc:B (1.321) BS03 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    794815 8dsc:B (1.321) BS04 TIE 2.4.2.12 GO:0005125 ... P43490 36746631
    794816 8dsd:A (1.429) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    794817 8dsd:A (1.429) BS02 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    794818 8dsd:A (1.429) BS03 TIW 2.4.2.12 GO:0005125 ... P43490 36746631
    794819 8dsd:A (1.429) BS04 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    794820 8dsd:B (1.429) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    794821 8dsd:B (1.429) BS02 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    794822 8dsd:B (1.429) BS03 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    794823 8dsd:B (1.429) BS04 TIW 2.4.2.12 GO:0005125 ... P43490 36746631
    794824 8dse:A (1.428) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    794825 8dse:A (1.428) BS02 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    794826 8dse:A (1.428) BS03 QCT 2.4.2.12 GO:0005125 ... P43490 36746631
    794827 8dse:A (1.428) BS04 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    794828 8dse:B (1.428) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    794829 8dse:B (1.428) BS02 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    794830 8dse:B (1.428) BS03 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    794831 8dse:B (1.428) BS04 QCT 2.4.2.12 GO:0005125 ... P43490 36746631
    794832 8dsf:A (1.5) BS01 ZN 2.3.2.27 N/A Q13490 36864023
    794833 8dsf:A (1.5) BS02 TO0 2.3.2.27 N/A Q13490 36864023
    794834 8dsf:B (1.5) BS01 ZN 2.3.2.27 N/A Q13490 36864023
    794835 8dsf:B (1.5) BS02 TO0 2.3.2.27 N/A Q13490 36864023
    794836 8dsf:C (1.5) BS01 TO0 2.3.2.27 N/A Q13490 36864023
    794837 8dsf:C (1.5) BS02 ZN 2.3.2.27 N/A Q13490 36864023
    794838 8dsf:C (1.5) BS03 TO0 2.3.2.27 N/A Q13490 36864023
    794839 8dsf:D (1.5) BS01 ZN 2.3.2.27 N/A Q13490 36864023
    794840 8dsf:D (1.5) BS02 TO0 2.3.2.27 N/A Q13490 36864023
    794841 8dsg:A (1.87) BS01 HEM 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 36875868
    794842 8dsg:B (1.87) BS01 HEM 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 36875868
    794843 8dsg:C (1.87) BS01 HEM 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 36875868
    794844 8dsg:D (1.87) BS01 HEM 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 36875868
    794845 8dsh:A (2.2) BS01 A12 2.4.2.12 GO:0005125 ... P43490 36746631
    794846 8dsh:A (2.2) BS02 QCT 2.4.2.12 GO:0005125 ... P43490 36746631
    794847 8dsh:A (2.2) BS03 A12 2.4.2.12 GO:0005125 ... P43490 36746631
    794848 8dsh:B (2.2) BS01 A12 2.4.2.12 GO:0005125 ... P43490 36746631
    794849 8dsh:B (2.2) BS02 A12 2.4.2.12 GO:0005125 ... P43490 36746631
    794850 8dsh:B (2.2) BS03 QCT 2.4.2.12 GO:0005125 ... P43490 36746631
    794851 8dsi:A (1.43) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    794852 8dsi:A (1.43) BS02 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    794853 8dsi:A (1.43) BS03 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    794854 8dsi:B (1.43) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    794855 8dsi:B (1.43) BS02 NCA 2.4.2.12 GO:0005125 ... P43490 36746631
    794856 8dsi:B (1.43) BS03 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    794857 8dsj:A (2.8) BS01 CU 1.14.17.3
    4.3.2.5    		 GO:0003824 ... P14925 36880254
    794858 8dsj:A (2.8) BS02 CU 1.14.17.3
    4.3.2.5    		 GO:0003824 ... P14925 36880254
    794859 8dsj:K (2.8) BS01 CU 1.14.17.3
    4.3.2.5    		 GO:0003824 ... P14925 36880254
    794860 8dsj:K (2.8) BS02 CU 1.14.17.3
    4.3.2.5    		 GO:0003824 ... P14925 36880254
    794861 8dsk:A (1.63) BS01 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    794862 8dsk:A (1.63) BS02 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    794863 8dsk:A (1.63) BS03 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    794864 8dsk:A (1.63) BS04 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    794865 8dsk:B (1.63) BS01 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    794866 8dsk:B (1.63) BS02 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    794867 8dsk:B (1.63) BS03 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    794868 8dsk:B (1.63) BS04 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    794869 8dsk:C (1.63) BS01 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    794870 8dsk:C (1.63) BS02 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    794871 8dsk:C (1.63) BS03 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    794872 8dsk:C (1.63) BS04 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    794873 8dsk:D (1.63) BS01 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    794874 8dsk:D (1.63) BS02 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    794875 8dsk:D (1.63) BS03 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    794876 8dsk:D (1.63) BS04 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    794877 8dsl:A (2.05) BS01 CU 1.14.17.3
    4.3.2.5    		 GO:0003824 ... P14925 36880254
    794878 8dsl:A (2.05) BS02 CU 1.14.17.3
    4.3.2.5    		 GO:0003824 ... P14925 36880254
    794879 8dsl:B (2.05) BS01 CU 1.14.17.3
    4.3.2.5    		 GO:0003824 ... P14925 36880254
    794880 8dsl:B (2.05) BS02 CU 1.14.17.3
    4.3.2.5    		 GO:0003824 ... P14925 36880254
    794881 8dsm:A (2.75) BS01 TK0 2.4.2.12 GO:0005125 ... P43490 N/A
    794882 8dsm:B (2.75) BS01 TK0 2.4.2.12 GO:0005125 ... P43490 N/A
    794883 8dsm:B (2.75) BS02 TK0 2.4.2.12 GO:0005125 ... P43490 N/A
    794884 8dsm:C (2.75) BS01 TK0 2.4.2.12 GO:0005125 ... P43490 N/A
    794885 8dsm:C (2.75) BS02 TK0 2.4.2.12 GO:0005125 ... P43490 N/A
    794886 8dsm:D (2.75) BS01 TK0 2.4.2.12 GO:0005125 ... P43490 N/A
    794887 8dsm:D (2.75) BS02 TK0 2.4.2.12 GO:0005125 ... P43490 N/A
    794888 8dsn:A (2.8) BS01 CU 1.14.17.3
    4.3.2.5    		 GO:0003824 ... P14925 36880254
    794889 8dsn:A (2.8) BS02 CU 1.14.17.3
    4.3.2.5    		 GO:0003824 ... P14925 36880254
    794890 8dsn:K (2.8) BS01 CU 1.14.17.3
    4.3.2.5    		 GO:0003824 ... P14925 36880254
    794891 8dsn:K (2.8) BS02 CU 1.14.17.3
    4.3.2.5    		 GO:0003824 ... P14925 36880254
    794892 8dso:B (2.334) BS01 TOO 2.7.10.2 GO:0004672 ... Q06187 36864023
    794893 8dso:D (2.334) BS01 TOO 2.3.2.27 N/A Q13490 36864023
    794894 8dso:D (2.334) BS02 ZN 2.3.2.27 N/A Q13490 36864023
    794895 8dsr:A (2.85) BS01 TWU 3.4.23.- GO:0004190 ... Q8IAS0 36216349
    794896 8dsr:B (2.85) BS01 TWU 3.4.23.- GO:0004190 ... Q8IAS0 36216349
    794897 8dsu:A (1.86) BS01 V2M 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 36992489
    794898 8dsu:B (1.86) BS01 V2M 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 36992489
    794899 8dsv:A (2.5) BS01 FDA 1.4.2.2 GO:0016491 ... F8G0P2 37770699
    794900 8dsv:B (2.5) BS01 FDA 1.4.2.2 GO:0016491 ... F8G0P2 37770699
    794901 8dsv:B (2.5) BS02 TXU 1.4.2.2 GO:0016491 ... F8G0P2 37770699
    794902 8dsw:A (2.39) BS01 MG 2.7.10.1 GO:0004672 ... P00533 N/A
    794903 8dsw:A (2.39) BS02 ANP 2.7.10.1 GO:0004672 ... P00533 N/A
    794904 8dsy:A (2.95) BS01 TJC ? GO:0003677 ... P37231 36179791
    794905 8dsy:B (2.95) BS01 TJC ? GO:0003677 ... P37231 36179791
    794906 8dsz:A (2.5) BS01 TJO ? GO:0003677 ... P37231 36179791
    794907 8dsz:B (2.5) BS01 TJO ? GO:0003677 ... P37231 36179791
    794908 8dt1:A (1.8) BS01 NAD ? GO:0003858 ... A0A1V2Y0M0 N/A
    794909 8dt1:B (1.8) BS01 NAD ? GO:0003858 ... A0A1V2Y0M0 N/A
    794910 8dt1:C (1.8) BS01 NAD ? GO:0003858 ... A0A1V2Y0M0 N/A
    794911 8dt1:D (1.8) BS01 NAD ? GO:0003858 ... A0A1V2Y0M0 N/A
    794912 8dt3:H (3.3) BS01 FUC N/A N/A N/A 35926067
    794913 8dt4:A (2.8) BS01 3VI 3.1.1.7 GO:0001507 ... P22303 36265484
    794914 8dt4:B (2.8) BS01 3VI 3.1.1.7 GO:0001507 ... P22303 36265484
    794915 8dt5:A (2.6) BS01 LND 3.1.1.7 GO:0001507 ... P22303 36265484
    794916 8dt5:B (2.6) BS01 LND 3.1.1.7 GO:0001507 ... P22303 36265484
    794917 8dt6:A (2.35) BS01 CA ? GO:0003677 ... A0A077EHW1 N/A
    794918 8dt6:B (2.35) BS01 CA ? GO:0003677 ... A0A077EHW1 N/A
    794919 8dt6:C (2.35) BS01 CA ? GO:0003677 ... A0A077EHW1 N/A
    794920 8dt6:C (2.35) BS02 CA ? GO:0003677 ... A0A077EHW1 N/A
    794921 8dt6:C (2.35) BS03 CA ? GO:0003677 ... A0A077EHW1 N/A
    794922 8dt6:D (2.35) BS01 CA ? GO:0003677 ... A0A077EHW1 N/A
    794923 8dt6:D (2.35) BS02 CA ? GO:0003677 ... A0A077EHW1 N/A
    794924 8dt7:A (2.207) BS01 3VI 3.1.1.7 GO:0001507 ... P22303 36265484
    794925 8dt7:B (2.207) BS01 3VI 3.1.1.7 GO:0001507 ... P22303 36265484
    794926 8dt9:A (2.0) BS01 V2M 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 38472113
    794927 8dt9:B (2.0) BS01 V2M 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 38472113
    794928 8dtb:A (3.14) BS01 CFF ? GO:0003151 ... P11716 37224245
    794929 8dtb:A (3.14) BS02 ATP ? GO:0003151 ... P11716 37224245
    794930 8dtb:D (3.14) BS01 ATP ? GO:0003151 ... P11716 37224245
    794931 8dtb:G (3.14) BS01 ATP ? GO:0003151 ... P11716 37224245
    794932 8dtc:A (2.25) BS01 BGC ? GO:0004340 ... L8GT25 N/A
    794933 8dtc:A (2.25) BS02 BGC ? GO:0004340 ... L8GT25 N/A
    794934 8dtc:B (2.25) BS01 BGC ? GO:0004340 ... L8GT25 N/A
    794935 8dtc:B (2.25) BS02 BGC ? GO:0004340 ... L8GT25 N/A
    794936 8dtd:A (1.95) BS01 PPF 2.5.1.- GO:0000287 ... Q739M9 36525630
    794937 8dtd:A (1.95) BS02 ZN 2.5.1.- GO:0000287 ... Q739M9 36525630
    794938 8dtd:B (1.95) BS01 PPF 2.5.1.- GO:0000287 ... Q739M9 36525630
    794939 8dtd:B (1.95) BS02 ZN 2.5.1.- GO:0000287 ... Q739M9 36525630
    794940 8dte:A (2.2) BS01 MG ? N/A B4RRD5 N/A
    794941 8dti:A (3.8) BS01 GFB 2.4.1.221
    2.4.1.255    		 GO:0005515 ... Q96301 N/A
    794942 8dti:B (3.8) BS01 GFB 2.4.1.221
    2.4.1.255    		 GO:0005515 ... Q96301 N/A
    794943 8dtj:A (2.118) BS01 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    794944 8dtj:A (2.118) BS02 TKF 2.4.2.12 GO:0005125 ... P43490 36746631
    794945 8dtj:B (2.118) BS01 PO4 2.4.2.12 GO:0005125 ... P43490 36746631
    794946 8dtj:B (2.118) BS02 TKF 2.4.2.12 GO:0005125 ... P43490 36746631
    794947 8dtm:B (3.5) BS01 peptide 2.7.10.1 GO:0001540 ... P15208 36151101
    794948 8dtn:A (2.199) BS01 peptide N/A N/A N/A 36626555
    794949 8dtn:C (2.199) BS01 peptide N/A N/A N/A 36626555
    794950 8dtn:F (2.199) BS01 ZN ? N/A Q9H165 36626555
    794951 8dtn:G (2.199) BS01 peptide N/A N/A N/A 36626555
    794952 8dto:D (3.57) BS01 MAN N/A N/A N/A 38670093
    794953 8dto:D (3.57) BS02 MAN N/A N/A N/A 38670093
    794954 8dto:D (3.57) BS03 MAN N/A N/A N/A 38670093
    794955 8dto:H (3.57) BS01 MAN N/A N/A N/A 38670093
    794956 8dto:H (3.57) BS02 MAN N/A N/A N/A 38670093
    794957 8dto:H (3.57) BS03 MAN N/A N/A N/A 38670093
    794958 8dto:L (3.57) BS01 MAN N/A N/A N/A 38670093
    794959 8dto:L (3.57) BS02 MAN N/A N/A N/A 38670093
    794960 8dtp:A (2.7) BS01 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    794961 8dtp:B (2.7) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    794962 8dtp:B (2.7) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    794963 8dtp:B (2.7) BS03 MG 3.6.4.- GO:0000166 ... P04530 37474605
    794964 8dtp:B (2.7) BS04 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    794965 8dtp:C (2.7) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    794966 8dtp:C (2.7) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    794967 8dtp:C (2.7) BS03 MG 3.6.4.- GO:0000166 ... P04530 37474605
    794968 8dtp:C (2.7) BS04 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    794969 8dtp:D (2.7) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    794970 8dtp:D (2.7) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    794971 8dtp:D (2.7) BS03 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    794972 8dtp:E (2.7) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    794973 8dtp:E (2.7) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    794974 8dtp:E (2.7) BS03 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    794975 8dtp:F (2.7) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    794976 8dtp:F (2.7) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    794977 8dtr:A (1.5) BS01 peptide N/A N/A N/A 36347257
    794978 8dtr:B (1.5) BS01 peptide N/A N/A N/A 36347257
    794979 8dtr:E (1.5) BS01 peptide N/A N/A N/A 36347257
    794980 8dtr:F (1.5) BS01 peptide N/A N/A N/A 36347257
    794981 8dtt:A (1.75) BS01 peptide N/A N/A N/A 36347257
    794982 8dtt:B (1.75) BS01 peptide N/A N/A N/A 36347257
    794983 8dtt:E (1.75) BS01 peptide N/A N/A N/A 36347257
    794984 8dtt:F (1.75) BS01 peptide N/A N/A N/A 36347257
    794985 8dtu:A (2.447) BS01 peptide N/A N/A N/A 36626555
    794986 8dtu:A (2.447) BS02 peptide N/A N/A N/A 36626555
    794987 8dtw:A (2.33) BS01 MN ? GO:0003723 ... C6H0Y9 36603507
    794988 8dtw:A (2.33) BS02 MN ? GO:0003723 ... C6H0Y9 36603507
    794989 8dtw:A (2.33) BS03 TLR ? GO:0003723 ... C6H0Y9 36603507
    794990 8dtw:A (2.33) BS04 QQ4 ? GO:0003723 ... C6H0Y9 36603507
    794991 8dtx:A (1.6) BS01 peptide N/A N/A N/A 36347257
    794992 8dtx:B (1.6) BS01 peptide N/A N/A N/A 36347257
    794993 8dtx:H (1.6) BS01 peptide N/A N/A N/A 36347257
    794994 8dtx:L (1.6) BS01 peptide N/A N/A N/A 36347257
    794995 8dty:A (3.5) BS01 ZN ? GO:0001666 ... E9Q401 N/A
    794996 8dty:B (3.5) BS01 ZN ? GO:0001666 ... E9Q401 N/A
    794997 8dty:C (3.5) BS01 ZN ? GO:0001666 ... E9Q401 N/A
    794998 8dty:D (3.5) BS01 ZN ? GO:0001666 ... E9Q401 N/A
    794999 8dtz:A (3.6) BS01 ZN ? GO:0001666 ... E9Q401 N/A
    795000 8dtz:B (3.6) BS01 ZN ? GO:0001666 ... E9Q401 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).