SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    795001 8dtz:C (3.6) BS01 ZN ? GO:0001666 ... E9Q401 N/A
    795002 8dtz:D (3.6) BS01 ZN ? GO:0001666 ... E9Q401 N/A
    795003 8du0:A (2.1) BS01 NAP 1.1.1.271 GO:0009226 ... A0A0H3AU93 N/A
    795004 8du1:A (1.85) BS01 NAD 4.2.1.46 GO:0008460 ... A0A077ELH2 N/A
    795005 8du1:B (1.85) BS01 NAD 4.2.1.46 GO:0008460 ... A0A077ELH2 N/A
    795006 8du1:C (1.85) BS01 NAD 4.2.1.46 GO:0008460 ... A0A077ELH2 N/A
    795007 8du1:D (1.85) BS01 NAD 4.2.1.46 GO:0008460 ... A0A077ELH2 N/A
    795008 8du3:A (2.5) BS01 TKO ? GO:0001609 ... P0ABE7
    P29274
    35933788
    795009 8du3:A (2.5) BS02 CLR ? GO:0001609 ... P0ABE7
    P29274
    35933788
    795010 8du3:A (2.5) BS03 CLR ? GO:0001609 ... P0ABE7
    P29274
    35933788
    795011 8du3:A (2.5) BS04 CLR ? GO:0001609 ... P0ABE7
    P29274
    35933788
    795012 8du4:A (3.55) BS01 dna ? GO:0000776 ... P02302 36095189
    795013 8du4:A (3.55) BS02 dna ? GO:0000776 ... P02302 36095189
    795014 8du4:B (3.55) BS01 dna ? GO:0000786 ... P62799 36095189
    795015 8du4:B (3.55) BS02 dna ? GO:0000786 ... P62799 36095189
    795016 8du4:C (3.55) BS01 dna ? GO:0000786 ... P06897 36095189
    795017 8du4:C (3.55) BS02 dna ? GO:0000786 ... P06897 36095189
    795018 8du4:D (3.55) BS01 dna ? GO:0000786 ... P02281 36095189
    795019 8du4:D (3.55) BS02 dna ? GO:0000786 ... P02281 36095189
    795020 8du4:E (3.55) BS01 dna ? GO:0000776 ... P02302 36095189
    795021 8du4:E (3.55) BS02 dna ? GO:0000776 ... P02302 36095189
    795022 8du4:F (3.55) BS01 dna ? GO:0000786 ... P62799 36095189
    795023 8du4:G (3.55) BS01 dna ? GO:0000786 ... P06897 36095189
    795024 8du4:G (3.55) BS02 dna ? GO:0000786 ... P06897 36095189
    795025 8du4:H (3.55) BS01 dna ? GO:0000786 ... P02281 36095189
    795026 8du4:H (3.55) BS02 dna ? GO:0000786 ... P02281 36095189
    795027 8du6:A (2.1) BS01 TQF ? N/A P03372 36517522
    795028 8du6:B (2.1) BS01 TQF ? N/A P03372 36517522
    795029 8du8:A (1.47) BS01 TS7 ? N/A P03372 36517522
    795030 8du8:B (1.47) BS01 TS7 ? N/A P03372 36517522
    795031 8du9:A (2.5) BS01 TT5 ? N/A P03372 36517522
    795032 8du9:B (2.5) BS01 TT5 ? N/A P03372 36517522
    795033 8dub:A (1.84) BS01 TTU ? N/A P03372 36517522
    795034 8dub:B (1.84) BS01 TTU ? N/A P03372 36517522
    795035 8duc:A (1.7) BS01 TU9 ? N/A P03372 36517522
    795036 8dud:A (1.81) BS01 TV3 ? N/A P03372 36517522
    795037 8due:A (2.9) BS01 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795038 8due:B (2.9) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    795039 8due:B (2.9) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795040 8due:B (2.9) BS03 MG 3.6.4.- GO:0000166 ... P04530 37474605
    795041 8due:B (2.9) BS04 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795042 8due:C (2.9) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    795043 8due:C (2.9) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795044 8due:C (2.9) BS03 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795045 8due:D (2.9) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    795046 8due:D (2.9) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795047 8due:D (2.9) BS03 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795048 8due:E (2.9) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    795049 8due:E (2.9) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795050 8due:E (2.9) BS03 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795051 8due:F (2.9) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    795052 8due:F (2.9) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795053 8dug:A (2.2) BS01 TVF ? N/A P03372 36517522
    795054 8dug:B (2.2) BS01 TVF ? N/A P03372 36517522
    795055 8duh:A (1.9) BS01 TVL ? N/A P03372 36517522
    795056 8duh:B (1.9) BS01 TVL ? N/A P03372 36517522
    795057 8dui:A (2.04) BS01 TVX ? N/A P03372 36517522
    795058 8dui:B (2.04) BS01 TVX ? N/A P03372 36517522
    795059 8duj:A (3.7) BS01 CFF ? GO:0003151 ... P11716 37224245
    795060 8duj:A (3.7) BS02 CA ? GO:0003151 ... P11716 37224245
    795061 8duj:A (3.7) BS03 ATP ? GO:0003151 ... P11716 37224245
    795062 8duj:A (3.7) BS04 ZN ? GO:0003151 ... P11716 37224245
    795063 8duj:D (3.7) BS01 CFF ? GO:0003151 ... P11716 37224245
    795064 8duj:D (3.7) BS02 CA ? GO:0003151 ... P11716 37224245
    795065 8duj:D (3.7) BS03 ATP ? GO:0003151 ... P11716 37224245
    795066 8duj:D (3.7) BS04 ZN ? GO:0003151 ... P11716 37224245
    795067 8duj:G (3.7) BS01 CFF ? GO:0003151 ... P11716 37224245
    795068 8duj:G (3.7) BS02 CA ? GO:0003151 ... P11716 37224245
    795069 8duj:G (3.7) BS03 ATP ? GO:0003151 ... P11716 37224245
    795070 8duj:G (3.7) BS04 ZN ? GO:0003151 ... P11716 37224245
    795071 8duj:J (3.7) BS01 CFF ? GO:0003151 ... P11716 37224245
    795072 8duj:J (3.7) BS02 CA ? GO:0003151 ... P11716 37224245
    795073 8duj:J (3.7) BS03 ATP ? GO:0003151 ... P11716 37224245
    795074 8duj:J (3.7) BS04 ZN ? GO:0003151 ... P11716 37224245
    795075 8duk:A (1.7) BS01 TW6 ? N/A P03372 36517522
    795076 8duk:B (1.7) BS01 TW6 ? N/A P03372 36517522
    795077 8duk:C (1.7) BS01 TW6 ? N/A P03372 36517522
    795078 8duk:D (1.7) BS01 TW6 ? N/A P03372 36517522
    795079 8duo:A (5.7) BS01 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795080 8duo:B (5.7) BS01 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795081 8duo:B (5.7) BS02 MG 3.6.4.- GO:0000166 ... P04530 37474605
    795082 8duo:C (5.7) BS01 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795083 8duo:C (5.7) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795084 8duo:D (5.7) BS01 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795085 8duo:D (5.7) BS02 MG 3.6.4.- GO:0000166 ... P04530 37474605
    795086 8duo:E (5.7) BS01 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795087 8duo:E (5.7) BS02 MG 3.6.4.- GO:0000166 ... P04530 37474605
    795088 8duo:E (5.7) BS03 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795089 8duo:F (5.7) BS01 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795090 8duo:F (5.7) BS02 MG 3.6.4.- GO:0000166 ... P04530 37474605
    795091 8dus:A (1.9) BS01 TWF ? N/A P03372 36517522
    795092 8dus:B (1.9) BS01 TWF ? N/A P03372 36517522
    795093 8dus:E (1.9) BS01 TWF ? N/A P03372 36517522
    795094 8dus:F (1.9) BS01 TWF ? N/A P03372 36517522
    795095 8dus:G (1.9) BS01 TWF ? N/A P03372 36517522
    795096 8dus:H (1.9) BS01 TWF ? N/A P03372 36517522
    795097 8duz:A (1.65) BS01 peptide N/A N/A N/A 39055159
    795098 8duz:C (1.65) BS01 peptide N/A N/A N/A 39055159
    795099 8dv3:A (1.9) BS01 PIE ? N/A P29016 36587766
    795100 8dv4:A (2.4) BS01 CUY ? N/A P29016 36587766
    795101 8dv4:A (2.4) BS02 PIE ? N/A P29016 36587766
    795102 8dv4:D (2.4) BS01 PIE N/A N/A N/A 36587766
    795103 8dv5:A (1.85) BS01 TX9 ? N/A P03372 36517522
    795104 8dv5:B (1.85) BS01 TX9 ? N/A P03372 36517522
    795105 8dv7:A (1.59) BS01 TXK ? N/A P03372 36517522
    795106 8dv7:B (1.59) BS01 TXK ? N/A P03372 36517522
    795107 8dv8:A (1.7) BS01 TZ3 ? N/A P03372 36517522
    795108 8dv8:B (1.7) BS01 TZ3 ? N/A P03372 36517522
    795109 8dvb:A (2.19) BS01 TZI ? N/A P03372 36517522
    795110 8dvb:B (2.19) BS01 TZI ? N/A P03372 36517522
    795111 8dvc:A (2.638) BS01 TZU ? GO:0016787 ... A0A0M5I297 37264151
    795112 8dvc:B (2.638) BS01 TZU ? GO:0016787 ... A0A0M5I297 37264151
    795113 8dvc:C (2.638) BS01 TZU ? GO:0016787 ... A0A0M5I297 37264151
    795114 8dvc:D (2.638) BS01 TZU ? GO:0016787 ... A0A0M5I297 37264151
    795115 8dvc:E (2.638) BS01 TZU ? GO:0016787 ... A0A0M5I297 37264151
    795116 8dvd:H (4.12) BS01 BMA N/A N/A N/A 36344847
    795117 8dvd:H (4.12) BS02 MAN N/A N/A N/A 36344847
    795118 8dvd:L (4.12) BS01 MAN N/A N/A N/A 36344847
    795119 8dve:A (3.84) BS01 CFF ? GO:0003151 ... P11716 37224245
    795120 8dve:A (3.84) BS02 CA ? GO:0003151 ... P11716 37224245
    795121 8dve:A (3.84) BS03 ATP ? GO:0003151 ... P11716 37224245
    795122 8dve:A (3.84) BS04 ZN ? GO:0003151 ... P11716 37224245
    795123 8dve:D (3.84) BS01 CFF ? GO:0003151 ... P11716 37224245
    795124 8dve:D (3.84) BS02 CA ? GO:0003151 ... P11716 37224245
    795125 8dve:D (3.84) BS03 ATP ? GO:0003151 ... P11716 37224245
    795126 8dve:D (3.84) BS04 ZN ? GO:0003151 ... P11716 37224245
    795127 8dve:G (3.84) BS01 CFF ? GO:0003151 ... P11716 37224245
    795128 8dve:G (3.84) BS02 CA ? GO:0003151 ... P11716 37224245
    795129 8dve:G (3.84) BS03 ATP ? GO:0003151 ... P11716 37224245
    795130 8dve:G (3.84) BS04 ZN ? GO:0003151 ... P11716 37224245
    795131 8dve:J (3.84) BS01 CFF ? GO:0003151 ... P11716 37224245
    795132 8dve:J (3.84) BS02 CA ? GO:0003151 ... P11716 37224245
    795133 8dve:J (3.84) BS03 ATP ? GO:0003151 ... P11716 37224245
    795134 8dve:J (3.84) BS04 ZN ? GO:0003151 ... P11716 37224245
    795135 8dvf:A (3.3) BS01 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795136 8dvf:B (3.3) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    795137 8dvf:B (3.3) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795138 8dvf:B (3.3) BS03 MG 3.6.4.- GO:0000166 ... P04530 37474605
    795139 8dvf:B (3.3) BS04 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795140 8dvf:C (3.3) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    795141 8dvf:C (3.3) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795142 8dvf:C (3.3) BS03 MG 3.6.4.- GO:0000166 ... P04530 37474605
    795143 8dvf:C (3.3) BS04 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795144 8dvf:D (3.3) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    795145 8dvf:D (3.3) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795146 8dvf:D (3.3) BS03 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795147 8dvf:E (3.3) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    795148 8dvf:E (3.3) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795149 8dvf:E (3.3) BS03 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795150 8dvf:F (3.3) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    795151 8dvf:F (3.3) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795152 8dvf:H (3.3) BS01 dna 2.7.7.- GO:0003899 ... P04520 37474605
    795153 8dvg:A (2.594) BS01 peptide ? N/A P04439 37604828
    795154 8dvh:A (1.9) BS01 BO2 3.4.21.53 GO:0004176 ... P42425 36232729
    795155 8dvh:B (1.9) BS01 BO2 3.4.21.53 GO:0004176 ... P42425 36232729
    795156 8dvi:A (3.2) BS01 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795157 8dvi:B (3.2) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    795158 8dvi:B (3.2) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795159 8dvi:B (3.2) BS03 MG 3.6.4.- GO:0000166 ... P04530 37474605
    795160 8dvi:B (3.2) BS04 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795161 8dvi:C (3.2) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    795162 8dvi:C (3.2) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795163 8dvi:C (3.2) BS03 MG 3.6.4.- GO:0000166 ... P04530 37474605
    795164 8dvi:C (3.2) BS04 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795165 8dvi:D (3.2) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    795166 8dvi:D (3.2) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795167 8dvi:D (3.2) BS03 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795168 8dvi:E (3.2) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    795169 8dvi:E (3.2) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795170 8dvi:E (3.2) BS03 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795171 8dvi:F (3.2) BS01 dna 3.6.4.- GO:0000166 ... P04530 37474605
    795172 8dvi:F (3.2) BS02 AGS 3.6.4.- GO:0000166 ... P04530 37474605
    795173 8dvi:H (3.2) BS01 dna 2.7.7.- GO:0003899 ... P04520 37474605
    795174 8dvl:A (2.5) BS01 peptide ? N/A O75581 36893429
    795175 8dvl:A (2.5) BS02 CA ? N/A O75581 36893429
    795176 8dvm:A (2.0) BS01 peptide ? N/A O75581 36893429
    795177 8dvm:A (2.0) BS02 CA ? N/A O75581 36893429
    795178 8dvm:A (2.0) BS03 CA ? N/A O75581 36893429
    795179 8dvn:A (2.53) BS01 CA ? N/A O75581 36893429
    795180 8dvn:A (2.53) BS02 CA ? N/A O75581 36893429
    795181 8dvn:A (2.53) BS03 CA ? N/A O75581 36893429
    795182 8dvn:A (2.53) BS04 CA ? N/A O75581 36893429
    795183 8dvo:A (2.33) BS01 MN ? GO:0003723 ... C6H0Y9 N/A
    795184 8dvo:A (2.33) BS02 MN ? GO:0003723 ... C6H0Y9 N/A
    795185 8dvo:A (2.33) BS03 U0I ? GO:0003723 ... C6H0Y9 N/A
    795186 8dvo:A (2.33) BS04 QQ4 ? GO:0003723 ... C6H0Y9 N/A
    795187 8dvp:A (1.54) BS01 dna 3.2.2.31 GO:0000701 ... P83847 36631987
    795188 8dvp:A (1.54) BS02 dna 3.2.2.31 GO:0000701 ... P83847 36631987
    795189 8dvp:A (1.54) BS03 SF4 3.2.2.31 GO:0000701 ... P83847 36631987
    795190 8dvp:A (1.54) BS04 CA 3.2.2.31 GO:0000701 ... P83847 36631987
    795191 8dvp:A (1.54) BS05 CA 3.2.2.31 GO:0000701 ... P83847 36631987
    795192 8dvp:A (1.54) BS06 CA 3.2.2.31 GO:0000701 ... P83847 36631987
    795193 8dvr:A (3.3) BS01 rna 3.6.4.13 GO:0002230 ... O95786 36272408
    795194 8dvr:A (3.3) BS02 ZN 3.6.4.13 GO:0002230 ... O95786 36272408
    795195 8dvr:A (3.3) BS03 GTP 3.6.4.13 GO:0002230 ... O95786 36272408
    795196 8dvs:A (3.0) BS01 rna 3.6.4.13 GO:0002230 ... O95786 36272408
    795197 8dvs:A (3.0) BS02 ZN 3.6.4.13 GO:0002230 ... O95786 36272408
    795198 8dvs:A (3.0) BS03 ADP 3.6.4.13 GO:0002230 ... O95786 36272408
    795199 8dvu:A (2.9) BS01 rna 3.6.4.13 GO:0002230 ... O95786 36272408
    795200 8dvu:A (2.9) BS02 ZN 3.6.4.13 GO:0002230 ... O95786 36272408

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).