SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    795801 8e35:P (2.27) BS01 rna ? GO:0002181 ... P61175 N/A
    795802 8e35:Q (2.27) BS01 rna ? GO:0000027 ... P0A7N4 N/A
    795803 8e35:R (2.27) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    795804 8e36:K (2.38) BS01 rna ? GO:0000027 ... P60422 N/A
    795805 8e36:L (2.38) BS01 rna ? GO:0002181 ... P02413 N/A
    795806 8e36:M (2.38) BS01 rna ? GO:0001070 ... P60723 N/A
    795807 8e36:N (2.38) BS01 rna ? GO:0000027 ... P60438 N/A
    795808 8e36:O (2.38) BS01 rna ? GO:0002181 ... P0AA10 N/A
    795809 8e36:P (2.38) BS01 rna ? GO:0002181 ... P61175 N/A
    795810 8e36:Q (2.38) BS01 rna ? GO:0000027 ... P0A7N4 N/A
    795811 8e36:R (2.38) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    795812 8e3d:A (2.62) BS01 dna ? N/A O95365 36626981
    795813 8e3d:A (2.62) BS02 dna ? N/A O95365 36626981
    795814 8e3d:A (2.62) BS03 ZN ? N/A O95365 36626981
    795815 8e3d:A (2.62) BS04 ZN ? N/A O95365 36626981
    795816 8e3d:A (2.62) BS05 ZN ? N/A O95365 36626981
    795817 8e3d:A (2.62) BS06 ZN ? N/A O95365 36626981
    795818 8e3d:B (2.62) BS01 dna ? N/A O95365 36626981
    795819 8e3d:B (2.62) BS02 dna ? N/A O95365 36626981
    795820 8e3d:B (2.62) BS03 ZN ? N/A O95365 36626981
    795821 8e3d:B (2.62) BS04 ZN ? N/A O95365 36626981
    795822 8e3d:B (2.62) BS05 ZN ? N/A O95365 36626981
    795823 8e3d:B (2.62) BS06 ZN ? N/A O95365 36626981
    795824 8e3d:F (2.62) BS01 dna ? N/A O95365 36626981
    795825 8e3d:F (2.62) BS02 dna ? N/A O95365 36626981
    795826 8e3d:F (2.62) BS03 ZN ? N/A O95365 36626981
    795827 8e3d:F (2.62) BS04 ZN ? N/A O95365 36626981
    795828 8e3d:F (2.62) BS05 ZN ? N/A O95365 36626981
    795829 8e3d:F (2.62) BS06 ZN ? N/A O95365 36626981
    795830 8e3e:A (2.99) BS01 dna ? N/A O95365 36626981
    795831 8e3e:A (2.99) BS02 dna ? N/A O95365 36626981
    795832 8e3e:A (2.99) BS03 ZN ? N/A O95365 36626981
    795833 8e3e:A (2.99) BS04 ZN ? N/A O95365 36626981
    795834 8e3e:A (2.99) BS05 ZN ? N/A O95365 36626981
    795835 8e3e:A (2.99) BS06 ZN ? N/A O95365 36626981
    795836 8e3e:B (2.99) BS01 dna ? N/A O95365 36626981
    795837 8e3e:B (2.99) BS02 dna ? N/A O95365 36626981
    795838 8e3e:B (2.99) BS03 ZN ? N/A O95365 36626981
    795839 8e3e:B (2.99) BS04 ZN ? N/A O95365 36626981
    795840 8e3e:B (2.99) BS05 ZN ? N/A O95365 36626981
    795841 8e3e:B (2.99) BS06 ZN ? N/A O95365 36626981
    795842 8e3e:F (2.99) BS01 dna ? N/A O95365 36626981
    795843 8e3e:F (2.99) BS02 dna ? N/A O95365 36626981
    795844 8e3e:F (2.99) BS03 ZN ? N/A O95365 36626981
    795845 8e3e:F (2.99) BS04 ZN ? N/A O95365 36626981
    795846 8e3e:F (2.99) BS05 ZN ? N/A O95365 36626981
    795847 8e3e:F (2.99) BS06 ZN ? N/A O95365 36626981
    795848 8e3f:A (6.5) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 36697824
    795849 8e3f:A (6.5) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 36697824
    795850 8e3f:A (6.5) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 36697824
    795851 8e3f:B (6.5) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36697824
    795852 8e3f:B (6.5) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 36697824
    795853 8e3f:B (6.5) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 36697824
    795854 8e3f:B (6.5) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36697824
    795855 8e3f:B (6.5) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36697824
    795856 8e3f:B (6.5) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36697824
    795857 8e3f:F (6.5) BS01 dna ? GO:0005515 ... P0AFG0 36697824
    795858 8e3h:a (6.5) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 36697824
    795859 8e3h:a (6.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    795860 8e3h:a (6.5) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    795861 8e3h:a (6.5) BS04 BEF 3.6.4.- GO:0003676 ... P0AG30 36697824
    795862 8e3h:b (6.5) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 36697824
    795863 8e3h:b (6.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    795864 8e3h:b (6.5) BS03 BEF 3.6.4.- GO:0003676 ... P0AG30 36697824
    795865 8e3h:b (6.5) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    795866 8e3h:c (6.5) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 36697824
    795867 8e3h:c (6.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    795868 8e3h:c (6.5) BS03 BEF 3.6.4.- GO:0003676 ... P0AG30 36697824
    795869 8e3h:c (6.5) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    795870 8e3h:d (6.5) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 36697824
    795871 8e3h:d (6.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    795872 8e3h:d (6.5) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    795873 8e3h:d (6.5) BS04 BEF 3.6.4.- GO:0003676 ... P0AG30 36697824
    795874 8e3h:e (6.5) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 36697824
    795875 8e3h:e (6.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    795876 8e3h:e (6.5) BS03 BEF 3.6.4.- GO:0003676 ... P0AG30 36697824
    795877 8e3h:e (6.5) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    795878 8e3h:f (6.5) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 36697824
    795879 8e3h:f (6.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    795880 8e3h:f (6.5) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    795881 8e3h:f (6.5) BS04 BEF 3.6.4.- GO:0003676 ... P0AG30 36697824
    795882 8e3i:B (2.53) BS01 rna ? GO:0031124 ... Q9C0J8 36130077
    795883 8e3i:C (2.53) BS01 rna ? GO:0003676 ... O95639 36130077
    795884 8e3i:C (2.53) BS02 ZN ? GO:0003676 ... O95639 36130077
    795885 8e3i:C (2.53) BS03 ZN ? GO:0003676 ... O95639 36130077
    795886 8e3i:C (2.53) BS04 ZN ? GO:0003676 ... O95639 36130077
    795887 8e3j:A (2.71) BS01 UGO 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    795888 8e3j:B (2.71) BS01 UGO 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    795889 8e3k:F (1.28) BS01 dna ? GO:0003700 ... P17947 37352101
    795890 8e3k:F (1.28) BS02 dna ? GO:0003700 ... P17947 37352101
    795891 8e3l:K (2.35) BS01 rna ? GO:0000027 ... P60422 N/A
    795892 8e3l:L (2.35) BS01 rna ? GO:0002181 ... P02413 N/A
    795893 8e3l:M (2.35) BS01 rna ? GO:0001070 ... P60723 N/A
    795894 8e3l:N (2.35) BS01 rna ? GO:0000027 ... P60438 N/A
    795895 8e3l:O (2.35) BS01 rna ? GO:0002181 ... P0AA10 N/A
    795896 8e3l:P (2.35) BS01 rna ? GO:0002181 ... P61175 N/A
    795897 8e3l:Q (2.35) BS01 rna ? GO:0000027 ... P0A7N4 N/A
    795898 8e3l:R (2.35) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    795899 8e3m:K (2.25) BS01 rna ? GO:0000027 ... P60422 N/A
    795900 8e3m:L (2.25) BS01 rna ? GO:0002181 ... P02413 N/A
    795901 8e3m:M (2.25) BS01 rna ? GO:0001070 ... P60723 N/A
    795902 8e3m:N (2.25) BS01 rna ? GO:0000027 ... P60438 N/A
    795903 8e3m:O (2.25) BS01 rna ? GO:0002181 ... P0AA10 N/A
    795904 8e3m:P (2.25) BS01 rna ? GO:0002181 ... P61175 N/A
    795905 8e3m:Q (2.25) BS01 rna ? GO:0000027 ... P0A7N4 N/A
    795906 8e3m:R (2.25) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    795907 8e3n:A (2.25) BS01 VA0 ? GO:0003677 ... O75469 36848571
    795908 8e3o:K (1.99) BS01 rna ? GO:0000027 ... P60422 N/A
    795909 8e3o:L (1.99) BS01 rna ? GO:0002181 ... P02413 N/A
    795910 8e3o:M (1.99) BS01 rna ? GO:0001070 ... P60723 N/A
    795911 8e3o:N (1.99) BS01 rna ? GO:0000027 ... P60438 N/A
    795912 8e3o:O (1.99) BS01 rna ? GO:0002181 ... P0AA10 N/A
    795913 8e3o:P (1.99) BS01 rna ? GO:0002181 ... P61175 N/A
    795914 8e3o:Q (1.99) BS01 rna ? GO:0000027 ... P0A7N4 N/A
    795915 8e3o:R (1.99) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    795916 8e3p:A (2.3) BS01 UF6 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    795917 8e3p:B (2.3) BS01 UF6 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    795918 8e3q:C (2.68) BS01 ZN ? GO:0003676 ... O95639 36130077
    795919 8e3r:F (1.45) BS01 dna ? GO:0003700 ... P17947 37352101
    795920 8e3r:F (1.45) BS02 dna ? GO:0003700 ... P17947 37352101
    795921 8e3s:A (3.1) BS01 ZN 2.3.2.8 GO:0004057 ... P16639 37076488
    795922 8e3t:A (2.2) BS01 ICS 1.18.6.1 GO:0009399 ... P07328 36445204
    795923 8e3t:A (2.2) BS02 UFF 1.18.6.1 GO:0009399 ... P07328 36445204
    795924 8e3t:B (2.2) BS01 UFF 1.18.6.1 GO:0009399 ... P07329 36445204
    795925 8e3t:B (2.2) BS02 FE 1.18.6.1 GO:0009399 ... P07329 36445204
    795926 8e3t:B (2.2) BS03 FE 1.18.6.1 GO:0009399 ... P07329 36445204
    795927 8e3t:C (2.2) BS01 ICS 1.18.6.1 GO:0009399 ... P07328 36445204
    795928 8e3t:C (2.2) BS02 UFF 1.18.6.1 GO:0009399 ... P07328 36445204
    795929 8e3t:D (2.2) BS01 FE 1.18.6.1 GO:0009399 ... P07329 36445204
    795930 8e3t:D (2.2) BS02 UFF 1.18.6.1 GO:0009399 ... P07329 36445204
    795931 8e3t:D (2.2) BS03 FE 1.18.6.1 GO:0009399 ... P07329 36445204
    795932 8e3u:A (1.99) BS01 UFF 1.18.6.1 GO:0009399 ... P07328 36445204
    795933 8e3u:A (1.99) BS02 ICS 1.18.6.1 GO:0009399 ... P07328 36445204
    795934 8e3u:B (1.99) BS01 UFF 1.18.6.1 GO:0009399 ... P07329 36445204
    795935 8e3u:B (1.99) BS02 FE 1.18.6.1 GO:0009399 ... P07329 36445204
    795936 8e3u:B (1.99) BS03 FE 1.18.6.1 GO:0009399 ... P07329 36445204
    795937 8e3u:C (1.99) BS01 UFF 1.18.6.1 GO:0009399 ... P07328 36445204
    795938 8e3u:C (1.99) BS02 ICS 1.18.6.1 GO:0009399 ... P07328 36445204
    795939 8e3u:D (1.99) BS01 FE 1.18.6.1 GO:0009399 ... P07329 36445204
    795940 8e3u:D (1.99) BS02 UFF 1.18.6.1 GO:0009399 ... P07329 36445204
    795941 8e3u:D (1.99) BS03 FE 1.18.6.1 GO:0009399 ... P07329 36445204
    795942 8e3v:A (2.0) BS01 ICS 1.18.6.1 GO:0009399 ... P07328 36445204
    795943 8e3v:A (2.0) BS02 CLF 1.18.6.1 GO:0009399 ... P07328 36445204
    795944 8e3v:B (2.0) BS01 FE 1.18.6.1 GO:0009399 ... P07329 36445204
    795945 8e3v:B (2.0) BS02 CLF 1.18.6.1 GO:0009399 ... P07329 36445204
    795946 8e3v:B (2.0) BS03 FE 1.18.6.1 GO:0009399 ... P07329 36445204
    795947 8e3v:C (2.0) BS01 ICS 1.18.6.1 GO:0009399 ... P07328 36445204
    795948 8e3v:C (2.0) BS02 CLF 1.18.6.1 GO:0009399 ... P07328 36445204
    795949 8e3v:D (2.0) BS01 FE 1.18.6.1 GO:0009399 ... P07329 36445204
    795950 8e3v:D (2.0) BS02 FE 1.18.6.1 GO:0009399 ... P07329 36445204
    795951 8e3v:D (2.0) BS03 CLF 1.18.6.1 GO:0009399 ... P07329 36445204
    795952 8e3w:B (1.47) BS01 UHI ? N/A O60885 36809538
    795953 8e3x:R (2.3) BS01 peptide ? GO:0004888 ... P41586 36385145
    795954 8e3y:R (2.3) BS01 peptide ? GO:0004888 ... P32241 36385145
    795955 8e3z:R (2.7) BS01 peptide ? GO:0004888 ... P32241 36385145
    795956 8e40:A (3.57) BS01 rna 3.5.4.38 GO:0000932 ... Q7YR23 36598981
    795957 8e40:A (3.57) BS02 rna 3.5.4.38 GO:0000932 ... Q7YR23 36598981
    795958 8e40:A (3.57) BS03 ZN 3.5.4.38 GO:0000932 ... Q7YR23 36598981
    795959 8e40:B (3.57) BS01 rna ? GO:0003723 ... P12504 36598981
    795960 8e41:K (2.13) BS01 rna ? GO:0000027 ... P60422 N/A
    795961 8e41:L (2.13) BS01 rna ? GO:0002181 ... P02413 N/A
    795962 8e41:M (2.13) BS01 rna ? GO:0001070 ... P60723 N/A
    795963 8e41:N (2.13) BS01 rna ? GO:0000027 ... P60438 N/A
    795964 8e41:O (2.13) BS01 rna ? GO:0002181 ... P0AA10 N/A
    795965 8e41:P (2.13) BS01 rna ? GO:0002181 ... P61175 N/A
    795966 8e41:Q (2.13) BS01 rna ? GO:0000027 ... P0A7N4 N/A
    795967 8e41:R (2.13) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    795968 8e42:K (2.29) BS01 rna ? GO:0000027 ... P60422 N/A
    795969 8e42:L (2.29) BS01 rna ? GO:0002181 ... P02413 N/A
    795970 8e42:M (2.29) BS01 rna ? GO:0001070 ... P60723 N/A
    795971 8e42:N (2.29) BS01 rna ? GO:0000027 ... P60438 N/A
    795972 8e42:O (2.29) BS01 rna ? GO:0002181 ... P0AA10 N/A
    795973 8e42:P (2.29) BS01 rna ? GO:0002181 ... P61175 N/A
    795974 8e42:Q (2.29) BS01 rna ? GO:0000027 ... P0A7N4 N/A
    795975 8e42:R (2.29) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    795976 8e43:K (2.09) BS01 rna ? GO:0000027 ... P60422 N/A
    795977 8e43:L (2.09) BS01 rna ? GO:0002181 ... P02413 N/A
    795978 8e43:M (2.09) BS01 rna ? GO:0001070 ... P60723 N/A
    795979 8e43:N (2.09) BS01 rna ? GO:0000027 ... P60438 N/A
    795980 8e43:O (2.09) BS01 rna ? GO:0002181 ... P0AA10 N/A
    795981 8e43:P (2.09) BS01 rna ? GO:0002181 ... P61175 N/A
    795982 8e43:Q (2.09) BS01 rna ? GO:0000027 ... P0A7N4 N/A
    795983 8e43:R (2.09) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    795984 8e44:K (2.53) BS01 rna ? GO:0000027 ... P60422 N/A
    795985 8e44:L (2.53) BS01 rna ? GO:0002181 ... P02413 N/A
    795986 8e44:M (2.53) BS01 rna ? GO:0001070 ... P60723 N/A
    795987 8e44:N (2.53) BS01 rna ? GO:0000027 ... P60438 N/A
    795988 8e44:O (2.53) BS01 rna ? GO:0002181 ... P0AA10 N/A
    795989 8e44:P (2.53) BS01 rna ? GO:0002181 ... P61175 N/A
    795990 8e44:Q (2.53) BS01 rna ? GO:0000027 ... P0A7N4 N/A
    795991 8e44:R (2.53) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    795992 8e45:K (2.3) BS01 rna ? GO:0000027 ... P60422 N/A
    795993 8e45:L (2.3) BS01 rna ? GO:0002181 ... P02413 N/A
    795994 8e45:M (2.3) BS01 rna ? GO:0001070 ... P60723 N/A
    795995 8e45:N (2.3) BS01 rna ? GO:0000027 ... P60438 N/A
    795996 8e45:O (2.3) BS01 rna ? GO:0002181 ... P0AA10 N/A
    795997 8e45:P (2.3) BS01 rna ? GO:0002181 ... P61175 N/A
    795998 8e45:Q (2.3) BS01 rna ? GO:0000027 ... P0A7N4 N/A
    795999 8e45:R (2.3) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    796000 8e46:K (2.32) BS01 rna ? GO:0000027 ... P60422 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).