SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    795801 8eqm:c (2.6) BS12 CLA ? GO:0005737 ... B4WKI2 36549647
    795802 8eqm:c (2.6) BS13 CLA ? GO:0005737 ... B4WKI2 36549647
    795803 8eqm:d (2.6) BS01 FE2 1.10.3.9 GO:0005506 ... B4WKI3 36549647
    795804 8eqm:d (2.6) BS02 CLA 1.10.3.9 GO:0005506 ... B4WKI3 36549647
    795805 8eqm:d (2.6) BS03 PHO 1.10.3.9 GO:0005506 ... B4WKI3 36549647
    795806 8eqm:d (2.6) BS04 BCT 1.10.3.9 GO:0005506 ... B4WKI3 36549647
    795807 8eqm:d (2.6) BS05 CLA 1.10.3.9 GO:0005506 ... B4WKI3 36549647
    795808 8eqm:d (2.6) BS06 CL7 1.10.3.9 GO:0005506 ... B4WKI3 36549647
    795809 8eqm:d (2.6) BS07 PHO 1.10.3.9 GO:0005506 ... B4WKI3 36549647
    795810 8eqm:d (2.6) BS08 CLA 1.10.3.9 GO:0005506 ... B4WKI3 36549647
    795811 8eqm:d (2.6) BS09 CLA 1.10.3.9 GO:0005506 ... B4WKI3 36549647
    795812 8eqm:e (2.6) BS01 HEM ? GO:0005506 ... B4WII1 36549647
    795813 8eqm:f (2.6) BS01 HEM ? GO:0005506 ... B4WKJ2 36549647
    795814 8eqm:h (2.6) BS01 CLA ? GO:0009523 ... B4WKI0 36549647
    795815 8eqm:h (2.6) BS02 CLA ? GO:0009523 ... B4WKI0 36549647
    795816 8eqm:h (2.6) BS03 CLA ? GO:0009523 ... B4WKI0 36549647
    795817 8eqm:h (2.6) BS04 CLA ? GO:0009523 ... B4WKI0 36549647
    795818 8eqm:h (2.6) BS05 RRX ? GO:0009523 ... B4WKI0 36549647
    795819 8eqm:i (2.6) BS01 CLA ? GO:0005737 ... B4WM03 36549647
    795820 8eqm:i (2.6) BS02 CLA ? GO:0005737 ... B4WM03 36549647
    795821 8eqm:k (2.6) BS01 CLA ? GO:0005737 ... B4WR12 36549647
    795822 8eqm:k (2.6) BS02 CLA ? GO:0005737 ... B4WR12 36549647
    795823 8eqm:v (2.6) BS01 HEM ? GO:0005506 ... B4WI32 36549647
    795824 8eqo:B (1.62) BS01 CU ? GO:0003756 ... P0AEG4 36829940
    795825 8eqs:A (3.1) BS01 peptide ? GO:0005216 ... P59632 36695574
    795826 8eqs:B (3.1) BS01 peptide ? GO:0005216 ... P59632 36695574
    795827 8eqx:A (2.5) BS01 WT5 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    795828 8eqx:A (2.5) BS02 WT5 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    795829 8eqx:B (2.5) BS01 WT5 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    795830 8eqz:A (2.37) BS01 WQB ? GO:0003677 ... O75469 36848571
    795831 8eqz:B (2.37) BS01 WQB ? GO:0003677 ... O75469 36848571
    795832 8er0:A (2.2) BS01 TDC 1.14.13.- GO:0000166 ... A0A316WTJ0 37062778
    795833 8er0:A (2.2) BS02 FAD 1.14.13.- GO:0000166 ... A0A316WTJ0 37062778
    795834 8er0:B (2.2) BS01 TDC 1.14.13.- GO:0000166 ... A0A316WTJ0 37062778
    795835 8er0:B (2.2) BS02 FAD 1.14.13.- GO:0000166 ... A0A316WTJ0 37062778
    795836 8er1:A (1.9) BS01 FAD 1.14.13.- GO:0000166 ... A0A316WTJ0 37062778
    795837 8er4:A (2.3) BS01 XG5 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    795838 8er4:B (2.3) BS01 XG5 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    795839 8er6:A (2.81) BS01 XYU 5.2.1.8 GO:0003007 ... P62942 36533617
    795840 8er6:B (2.81) BS01 XYU 2.7.11.1 GO:0044877 ... P42345 36533617
    795841 8er6:C (2.81) BS01 XYU 5.2.1.8 GO:0003007 ... P62942 36533617
    795842 8er6:D (2.81) BS01 XYU 2.7.11.1 GO:0044877 ... P42345 36533617
    795843 8er6:E (2.81) BS01 XYU 5.2.1.8 GO:0003007 ... P62942 36533617
    795844 8er6:F (2.81) BS01 XYU 2.7.11.1 GO:0044877 ... P42345 36533617
    795845 8er7:A (3.07) BS01 XZ3 5.2.1.8 GO:0003007 ... P62942 36533617
    795846 8er7:B (3.07) BS01 XZ3 2.7.11.1 GO:0044877 ... P42345 36533617
    795847 8er7:C (3.07) BS01 XZ3 5.2.1.8 GO:0003007 ... P62942 36533617
    795848 8er7:D (3.07) BS01 XZ3 2.7.11.1 GO:0044877 ... P42345 36533617
    795849 8er7:E (3.07) BS01 XZ3 5.2.1.8 GO:0003007 ... P62942 36533617
    795850 8er7:F (3.07) BS01 XZ3 2.7.11.1 GO:0044877 ... P42345 36533617
    795851 8er8:A (2.3) BS01 dna N/A N/A N/A 37316488
    795852 8era:A (2.86) BS01 XZ9 2.7.11.1 GO:0000139 ... P42345 36533617
    795853 8era:A (2.86) BS02 XYU 2.7.11.1 GO:0000139 ... P42345 36533617
    795854 8era:B (2.86) BS01 XYU 5.2.1.8 GO:0003007 ... P62942 36533617
    795855 8erb:A (1.98) BS01 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795856 8erb:A (1.98) BS02 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795857 8erb:B (1.98) BS01 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795858 8erb:B (1.98) BS02 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795859 8erb:C (1.98) BS01 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795860 8erb:C (1.98) BS02 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795861 8erb:D (1.98) BS01 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795862 8erb:D (1.98) BS02 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795863 8erb:E (1.98) BS01 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795864 8erb:E (1.98) BS02 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795865 8erb:F (1.98) BS01 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795866 8erb:F (1.98) BS02 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795867 8erb:G (1.98) BS01 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795868 8erb:H (1.98) BS01 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795869 8erb:H (1.98) BS02 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795870 8erb:I (1.98) BS01 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795871 8erb:I (1.98) BS02 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795872 8erb:J (1.98) BS01 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795873 8erb:J (1.98) BS02 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795874 8erb:K (1.98) BS01 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795875 8erb:K (1.98) BS02 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795876 8erb:L (1.98) BS01 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795877 8erb:M (1.98) BS01 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795878 8erb:M (1.98) BS02 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795879 8erb:N (1.98) BS01 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795880 8erb:P (1.98) BS01 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795881 8erb:P (1.98) BS02 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795882 8erb:Q (1.98) BS01 WBJ 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795883 8erd:A (1.33) BS01 WQ6 2.7.11.22 GO:0000082 ... P24941 N/A
    795884 8erj:A (2.16) BS01 4LM 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795885 8erj:B (2.16) BS01 WQF 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795886 8erj:C (2.16) BS01 WQF 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795887 8erj:D (2.16) BS01 WQF 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795888 8erj:E (2.16) BS01 WQF 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795889 8erj:F (2.16) BS01 4LM 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795890 8erj:F (2.16) BS02 WQF 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795891 8erj:G (2.16) BS01 WQF 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795892 8erj:H (2.16) BS01 4LM 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795893 8erj:H (2.16) BS02 WQF 2.5.1.- GO:0003961 ... S0DUX5 38308582
    795894 8ern:A (1.64) BS01 WQK 2.7.11.22 GO:0000082 ... P24941 N/A
    795895 8ero:A (3.2) BS01 MG 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795896 8ero:A (3.2) BS02 MG 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795897 8ero:A (3.2) BS03 LBN 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795898 8ero:A (3.2) BS04 LBN 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795899 8ero:A (3.2) BS05 LBN 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795900 8ero:A (3.2) BS06 CDP 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795901 8ero:B (3.2) BS01 MG 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795902 8ero:B (3.2) BS02 MG 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795903 8ero:B (3.2) BS03 LBN 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795904 8ero:B (3.2) BS04 LBN 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795905 8ero:B (3.2) BS05 LBN 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795906 8ero:B (3.2) BS06 CDP 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795907 8erp:A (3.7) BS01 MG 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795908 8erp:A (3.7) BS02 MG 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795909 8erp:A (3.7) BS03 CDC 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795910 8erp:A (3.7) BS04 LBN 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795911 8erp:B (3.7) BS01 MG 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795912 8erp:B (3.7) BS02 MG 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795913 8erp:B (3.7) BS03 CDC 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795914 8erp:B (3.7) BS04 LBN 2.7.8.2 GO:0000139 ... Q4KLV1 37179328
    795915 8ers:A (1.05) BS01 WQO 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0DTD1 N/A
    795916 8erx:A (2.07) BS01 peptide N/A N/A N/A 36761745
    795917 8es7:G (3.04) BS01 Y01 ? GO:0004888 ... P09693 37100770
    795918 8es7:Y (3.04) BS01 Y01 ? GO:0004888 ... P20963 37100770
    795919 8es8:B (2.65) BS01 peptide N/A N/A N/A 37100770
    795920 8es8:B (2.65) BS02 Y01 N/A N/A N/A 37100770
    795921 8es8:N (2.65) BS01 peptide ? N/A Q861F7 37100770
    795922 8es8:Y (2.65) BS01 Y01 ? GO:0004888 ... P20963 37100770
    795923 8es9:B (3.25) BS01 peptide N/A N/A N/A 37100770
    795924 8es9:B (3.25) BS02 Y01 N/A N/A N/A 37100770
    795925 8es9:N (3.25) BS01 peptide ? N/A Q861F7 37100770
    795926 8es9:Y (3.25) BS01 Y01 ? GO:0004888 ... P20963 37100770
    795927 8esa:A (3.4) BS01 peptide ? GO:0006955 ... P61769
    Q53Z42
    37100770
    795928 8esb:A (3.12) BS01 peptide ? GO:0006955 ... Q53Z42 37100770
    795929 8esc:R (3.1) BS01 ATP ? GO:0000785 ... P80428 36263929
    795930 8ese:Z (1.35) BS01 peptide ? GO:0005515 ... Q9UBQ0 37172566
    795931 8esg:A (2.18) BS01 WSR ? GO:0006629 ... A0A833FHE1 N/A
    795932 8esg:H (2.18) BS01 WSR ? GO:0006629 ... A0A833FHE1 N/A
    795933 8esh:A (2.72) BS01 peptide ? GO:0016020 ... D2KZ37 36761745
    795934 8esi:A (2.35) BS01 WSR 2.3.1.-
    3.5.1.-
    3.5.1.24
    3.5.1.74
    GO:0005515 ... Q9KK62 N/A
    795935 8esi:B (2.35) BS01 WSR 2.3.1.-
    3.5.1.-
    3.5.1.24
    3.5.1.74
    GO:0005515 ... Q9KK62 N/A
    795936 8esi:C (2.35) BS01 WSR 2.3.1.-
    3.5.1.-
    3.5.1.24
    3.5.1.74
    GO:0005515 ... Q9KK62 N/A
    795937 8esi:D (2.35) BS01 WSR 2.3.1.-
    3.5.1.-
    3.5.1.24
    3.5.1.74
    GO:0005515 ... Q9KK62 N/A
    795938 8esi:E (2.35) BS01 WSR 2.3.1.-
    3.5.1.-
    3.5.1.24
    3.5.1.74
    GO:0005515 ... Q9KK62 N/A
    795939 8esi:F (2.35) BS01 WSR 2.3.1.-
    3.5.1.-
    3.5.1.24
    3.5.1.74
    GO:0005515 ... Q9KK62 N/A
    795940 8esi:G (2.35) BS01 WSR 2.3.1.-
    3.5.1.-
    3.5.1.24
    3.5.1.74
    GO:0005515 ... Q9KK62 N/A
    795941 8esi:H (2.35) BS01 WSR 2.3.1.-
    3.5.1.-
    3.5.1.24
    3.5.1.74
    GO:0005515 ... Q9KK62 N/A
    795942 8esk:A (2.9) BS01 RBR ? GO:0004888 ... P02710 37264005
    795943 8esk:A (2.9) BS02 CLR ? GO:0004888 ... P02710 37264005
    795944 8esk:B (2.9) BS01 RBR ? GO:0004888 ... P02718 37264005
    795945 8esk:D (2.9) BS01 RBR ? GO:0004888 ... P02710 37264005
    795946 8esk:D (2.9) BS02 CLR ? GO:0004888 ... P02710 37264005
    795947 8esk:E (2.9) BS01 RBR ? GO:0004888 ... P02714 37264005
    795948 8esl:A (3.11) BS01 WSR N/A N/A N/A N/A
    795949 8esl:B (3.11) BS01 WSR N/A N/A N/A N/A
    795950 8esl:C (3.11) BS01 WSR N/A N/A N/A N/A
    795951 8esl:D (3.11) BS01 WSR N/A N/A N/A N/A
    795952 8esm:A (3.2) BS01 WS0 2.3.1.20
    2.3.1.76
    GO:0001523 ... O75907 37248213
    795953 8esm:B (3.2) BS01 WS0 2.3.1.20
    2.3.1.76
    GO:0001523 ... O75907 37248213
    795954 8esq:3 (2.8) BS01 rna ? GO:0000460 ... Q9UTE6 36423630
    795955 8esq:8 (2.8) BS01 rna ? GO:0002181 ... P05767 36423630
    795956 8esq:8 (2.8) BS02 rna ? GO:0002181 ... P05767 36423630
    795957 8esq:A (2.8) BS01 rna ? GO:0000027 ... Q9HGL6 36423630
    795958 8esq:B (2.8) BS01 rna ? GO:0002181 ... P40372 36423630
    795959 8esq:C (2.8) BS01 rna ? GO:0002181 ... Q9P784 36423630
    795960 8esq:C (2.8) BS02 rna ? GO:0002181 ... Q9P784 36423630
    795961 8esq:D (2.8) BS01 rna 3.6.4.13 GO:0000463 ... Q09916 36423630
    795962 8esq:E (2.8) BS01 rna ? GO:0002181 ... P79071 36423630
    795963 8esq:F (2.8) BS01 rna ? GO:0000463 ... P25457 36423630
    795964 8esq:G (2.8) BS01 rna ? GO:0000470 ... O13672 36423630
    795965 8esq:G (2.8) BS02 rna ? GO:0000470 ... O13672 36423630
    795966 8esq:G (2.8) BS03 rna ? GO:0000470 ... O13672 36423630
    795967 8esq:H (2.8) BS01 rna ? GO:0002181 ... Q10232 36423630
    795968 8esq:I (2.8) BS01 rna ? GO:0003682 ... O94288 36423630
    795969 8esq:K (2.8) BS01 rna ? GO:0003723 ... Q9UT32 36423630
    795970 8esq:L (2.8) BS01 rna ? GO:0002181 ... O74175 36423630
    795971 8esq:L (2.8) BS02 rna ? GO:0002181 ... O74175 36423630
    795972 8esq:M (2.8) BS01 rna ? GO:0002181 ... O94238 36423630
    795973 8esq:N (2.8) BS01 rna ? GO:0002181 ... O74895 36423630
    795974 8esq:N (2.8) BS02 rna ? GO:0002181 ... O74895 36423630
    795975 8esq:O (2.8) BS01 rna ? GO:0002181 ... O42991 36423630
    795976 8esq:P (2.8) BS01 rna ? GO:0002181 ... O14339 36423630
    795977 8esq:P (2.8) BS02 rna ? GO:0002181 ... O14339 36423630
    795978 8esq:Q (2.8) BS01 rna ? GO:0002181 ... Q10192 36423630
    795979 8esq:R (2.8) BS01 rna ? GO:0002181 ... P05734 36423630
    795980 8esq:S (2.8) BS01 rna ? GO:0002181 ... P0CT68 36423630
    795981 8esq:T (2.8) BS01 rna ? GO:0002181 ... Q9UUC1 36423630
    795982 8esq:U (2.8) BS01 rna ? GO:0002181 ... Q09668 36423630
    795983 8esq:V (2.8) BS01 rna ? GO:0002181 ... P0CT60 36423630
    795984 8esq:W (2.8) BS01 rna ? GO:0000027 ... Q9USZ6 36423630
    795985 8esq:X (2.8) BS01 rna ? GO:0002181 ... Q10330 36423630
    795986 8esq:X (2.8) BS02 rna ? GO:0002181 ... Q10330 36423630
    795987 8esq:Y (2.8) BS01 rna ? GO:0002181 ... P78946 36423630
    795988 8esq:Y (2.8) BS02 rna ? GO:0002181 ... P78946 36423630
    795989 8esq:Z (2.8) BS01 rna ? GO:0002181 ... O14388 36423630
    795990 8esq:a (2.8) BS01 rna ? GO:0002181 ... P36585 36423630
    795991 8esq:b (2.8) BS01 rna ? GO:0000054 ... O94659 36423630
    795992 8esq:c (2.8) BS01 rna ? GO:0002181 ... Q9UTP0 36423630
    795993 8esq:d (2.8) BS01 rna ? GO:0002181 ... Q9URX6 36423630
    795994 8esq:e (2.8) BS01 rna ? GO:0002181 ... P79015 36423630
    795995 8esq:f (2.8) BS01 rna ? GO:0002181 ... Q9USG6 36423630
    795996 8esq:g (2.8) BS01 rna ? GO:0002181 ... O42846 36423630
    795997 8esq:h (2.8) BS01 rna ? GO:0000463 ... O74904 36423630
    795998 8esq:h (2.8) BS02 rna ? GO:0000463 ... O74904 36423630
    795999 8esq:i (2.8) BS01 rna ? GO:0002181 ... O94658 36423630
    796000 8esq:j (2.8) BS01 rna ? GO:0002181 ... P05733 36423630

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).