SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3971 3972 3973 3974 3975 3976 3977 3978 3979 3980 3981 3982 3983 3984 3985 3986 3987 3988 3989 3990 3991 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    796001 8e46:L (2.32) BS01 rna ? GO:0002181 ... P02413 N/A
    796002 8e46:M (2.32) BS01 rna ? GO:0001070 ... P60723 N/A
    796003 8e46:N (2.32) BS01 rna ? GO:0000027 ... P60438 N/A
    796004 8e46:O (2.32) BS01 rna ? GO:0002181 ... P0AA10 N/A
    796005 8e46:P (2.32) BS01 rna ? GO:0002181 ... P61175 N/A
    796006 8e46:Q (2.32) BS01 rna ? GO:0000027 ... P0A7N4 N/A
    796007 8e46:R (2.32) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    796008 8e47:K (2.32) BS01 rna ? GO:0000027 ... P60422 N/A
    796009 8e47:L (2.32) BS01 rna ? GO:0002181 ... P02413 N/A
    796010 8e47:M (2.32) BS01 rna ? GO:0001070 ... P60723 N/A
    796011 8e47:N (2.32) BS01 rna ? GO:0000027 ... P60438 N/A
    796012 8e47:O (2.32) BS01 rna ? GO:0002181 ... P0AA10 N/A
    796013 8e47:P (2.32) BS01 rna ? GO:0002181 ... P61175 N/A
    796014 8e47:Q (2.32) BS01 rna ? GO:0000027 ... P0A7N4 N/A
    796015 8e47:R (2.32) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    796016 8e48:K (2.27) BS01 rna ? GO:0000027 ... P60422 N/A
    796017 8e48:L (2.27) BS01 rna ? GO:0002181 ... P02413 N/A
    796018 8e48:M (2.27) BS01 rna ? GO:0001070 ... P60723 N/A
    796019 8e48:N (2.27) BS01 rna ? GO:0000027 ... P60438 N/A
    796020 8e48:O (2.27) BS01 rna ? GO:0002181 ... P0AA10 N/A
    796021 8e48:P (2.27) BS01 rna ? GO:0002181 ... P61175 N/A
    796022 8e48:Q (2.27) BS01 rna ? GO:0000027 ... P0A7N4 N/A
    796023 8e48:R (2.27) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    796024 8e49:K (2.05) BS01 rna ? GO:0000027 ... P60422 N/A
    796025 8e49:L (2.05) BS01 rna ? GO:0002181 ... P02413 N/A
    796026 8e49:M (2.05) BS01 rna ? GO:0001070 ... P60723 N/A
    796027 8e49:N (2.05) BS01 rna ? GO:0000027 ... P60438 N/A
    796028 8e49:O (2.05) BS01 rna ? GO:0002181 ... P0AA10 N/A
    796029 8e49:P (2.05) BS01 rna ? GO:0002181 ... P61175 N/A
    796030 8e49:Q (2.05) BS01 rna ? GO:0000027 ... P0A7N4 N/A
    796031 8e49:R (2.05) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    796032 8e4a:A (2.034) BS01 ZN 3.5.1.108 GO:0005737 ... P47205 37556556
    796033 8e4a:A (2.034) BS02 UFX 3.5.1.108 GO:0005737 ... P47205 37556556
    796034 8e4f:A (2.47) BS01 NAP 1.5.1.3 GO:0004146 ... J9F199 37104530
    796035 8e4h:F (1.39) BS01 dna ? GO:0003700 ... P17947 37352101
    796036 8e4h:F (1.39) BS02 dna ? GO:0003700 ... P17947 37352101
    796037 8e4i:A (2.2) BS01 UIJ 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    796038 8e4i:B (2.2) BS01 UIJ 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    796039 8e4k:A (2.2) BS01 UIO 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    796040 8e4k:B (2.2) BS01 UIO 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    796041 8e4l:A (3.32) BS01 CA ? GO:0005216 ... Q8R4D5 36227998
    796042 8e4l:A (3.32) BS02 UL9 ? GO:0005216 ... Q8R4D5 36227998
    796043 8e4l:A (3.32) BS03 ULO ? GO:0005216 ... Q8R4D5 36227998
    796044 8e4l:A (3.32) BS04 PIO ? GO:0005216 ... Q8R4D5 36227998
    796045 8e4l:B (3.32) BS01 CA ? GO:0005216 ... Q8R4D5 36227998
    796046 8e4l:B (3.32) BS02 UL9 ? GO:0005216 ... Q8R4D5 36227998
    796047 8e4l:B (3.32) BS03 ULO ? GO:0005216 ... Q8R4D5 36227998
    796048 8e4l:B (3.32) BS04 PIO ? GO:0005216 ... Q8R4D5 36227998
    796049 8e4l:C (3.32) BS01 CA ? GO:0005216 ... Q8R4D5 36227998
    796050 8e4l:C (3.32) BS02 UL9 ? GO:0005216 ... Q8R4D5 36227998
    796051 8e4l:C (3.32) BS03 ULO ? GO:0005216 ... Q8R4D5 36227998
    796052 8e4l:C (3.32) BS04 PIO ? GO:0005216 ... Q8R4D5 36227998
    796053 8e4l:D (3.32) BS01 CA ? GO:0005216 ... Q8R4D5 36227998
    796054 8e4l:D (3.32) BS02 UL9 ? GO:0005216 ... Q8R4D5 36227998
    796055 8e4l:D (3.32) BS03 ULO ? GO:0005216 ... Q8R4D5 36227998
    796056 8e4l:D (3.32) BS04 PIO ? GO:0005216 ... Q8R4D5 36227998
    796057 8e4m:A (3.44) BS01 PIO ? GO:0005216 ... Q8R4D5 36227998
    796058 8e4m:A (3.44) BS02 ULO ? GO:0005216 ... Q8R4D5 36227998
    796059 8e4m:A (3.44) BS03 CA ? GO:0005216 ... Q8R4D5 36227998
    796060 8e4m:B (3.44) BS01 PIO ? GO:0005216 ... Q8R4D5 36227998
    796061 8e4m:B (3.44) BS02 ULO ? GO:0005216 ... Q8R4D5 36227998
    796062 8e4m:B (3.44) BS03 CA ? GO:0005216 ... Q8R4D5 36227998
    796063 8e4m:C (3.44) BS01 PIO ? GO:0005216 ... Q8R4D5 36227998
    796064 8e4m:C (3.44) BS02 ULO ? GO:0005216 ... Q8R4D5 36227998
    796065 8e4m:C (3.44) BS03 CA ? GO:0005216 ... Q8R4D5 36227998
    796066 8e4m:D (3.44) BS01 PIO ? GO:0005216 ... Q8R4D5 36227998
    796067 8e4m:D (3.44) BS02 ULO ? GO:0005216 ... Q8R4D5 36227998
    796068 8e4m:D (3.44) BS03 CA ? GO:0005216 ... Q8R4D5 36227998
    796069 8e4n:A (3.07) BS01 PIO ? GO:0005216 ... Q8R4D5 36227998
    796070 8e4n:B (3.07) BS01 PIO ? GO:0005216 ... Q8R4D5 36227998
    796071 8e4n:C (3.07) BS01 PIO ? GO:0005216 ... Q8R4D5 36227998
    796072 8e4n:D (3.07) BS01 PIO ? GO:0005216 ... Q8R4D5 36227998
    796073 8e4o:A (3.43) BS01 PIO ? GO:0005216 ... Q8R4D5 36227998
    796074 8e4o:B (3.43) BS01 PIO ? GO:0005216 ... Q8R4D5 36227998
    796075 8e4o:C (3.43) BS01 PIO ? GO:0005216 ... Q8R4D5 36227998
    796076 8e4o:D (3.43) BS01 PIO ? GO:0005216 ... Q8R4D5 36227998
    796077 8e4p:A (3.59) BS01 Y01 ? GO:0005216 ... Q8R4D5 36227998
    796078 8e4p:B (3.59) BS01 Y01 ? GO:0005216 ... Q8R4D5 36227998
    796079 8e4p:C (3.59) BS01 Y01 ? GO:0005216 ... Q8R4D5 36227998
    796080 8e4p:C (3.59) BS02 Y01 ? GO:0005216 ... Q8R4D5 36227998
    796081 8e4p:D (3.59) BS01 Y01 ? GO:0005216 ... Q8R4D5 36227998
    796082 8e4p:D (3.59) BS02 Y01 ? GO:0005216 ... Q8R4D5 36227998
    796083 8e4r:A (1.8) BS01 K36 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36334779
    796084 8e4r:B (1.8) BS01 K36 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36334779
    796085 8e4s:A (2.4) BS01 MN ? GO:0003723 ... C6H0Y9 36603507
    796086 8e4s:A (2.4) BS02 MN ? GO:0003723 ... C6H0Y9 36603507
    796087 8e4s:A (2.4) BS03 U9U ? GO:0003723 ... C6H0Y9 36603507
    796088 8e4t:A (1.95) BS01 STU 2.7.10.1 GO:0004672 ... A9VBW0 37310965
    796089 8e4t:A (1.95) BS02 STU 2.7.10.1 GO:0004672 ... A9VBW0 37310965
    796090 8e4w:A (2.75) BS01 V2M 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38472113
    796091 8e4w:B (2.75) BS01 V2M 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38472113
    796092 8e4x:A (2.8) BS01 rna 3.5.4.37 GO:0003723 ... P78563 36243986
    796093 8e4x:A (2.8) BS02 rna 3.5.4.37 GO:0003723 ... P78563 36243986
    796094 8e4x:A (2.8) BS03 IHP 3.5.4.37 GO:0003723 ... P78563 36243986
    796095 8e4x:A (2.8) BS04 ZN 3.5.4.37 GO:0003723 ... P78563 36243986
    796096 8e4x:B (2.8) BS01 rna 3.5.4.37 GO:0003723 ... P78563 36243986
    796097 8e4x:B (2.8) BS02 rna 3.5.4.37 GO:0003723 ... P78563 36243986
    796098 8e4x:B (2.8) BS03 IHP 3.5.4.37 GO:0003723 ... P78563 36243986
    796099 8e4x:B (2.8) BS04 ZN 3.5.4.37 GO:0003723 ... P78563 36243986
    796100 8e4y:A (3.4) BS01 UKL 2.3.1.15 GO:0004366 ... Q9HCL2 36522428
    796101 8e4z:A (2.37) BS01 UKF 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    796102 8e4z:B (2.37) BS01 UKF 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    796103 8e50:A (3.67) BS01 COA 2.3.1.15 GO:0004366 ... Q9HCL2 36522428
    796104 8e50:A (3.67) BS02 NKO 2.3.1.15 GO:0004366 ... Q9HCL2 36522428
    796105 8e51:B (2.594) BS01 CA N/A GO:0005509 ... N/A 36911992
    796106 8e51:B (2.594) BS02 CA N/A GO:0005509 ... N/A 36911992
    796107 8e51:B (2.594) BS03 CA N/A GO:0005509 ... N/A 36911992
    796108 8e51:B (2.594) BS04 CA N/A GO:0005509 ... N/A 36911992
    796109 8e51:B (2.594) BS05 CA N/A GO:0005509 ... N/A 36911992
    796110 8e51:B (2.594) BS06 CA N/A GO:0005509 ... N/A 36911992
    796111 8e51:C (2.594) BS01 CA ? GO:0005509 ... A0A5N5MKD0 36911992
    796112 8e51:C (2.594) BS02 CA ? GO:0005509 ... A0A5N5MKD0 36911992
    796113 8e51:C (2.594) BS03 CA ? GO:0005509 ... A0A5N5MKD0 36911992
    796114 8e51:C (2.594) BS04 CA ? GO:0005509 ... A0A5N5MKD0 36911992
    796115 8e51:C (2.594) BS05 CA ? GO:0005509 ... A0A5N5MKD0 36911992
    796116 8e51:C (2.594) BS06 CA ? GO:0005509 ... A0A5N5MKD0 36911992
    796117 8e51:C (2.594) BS07 CA ? GO:0005509 ... A0A5N5MKD0 36911992
    796118 8e52:AAA (2.8) BS01 CA 3.4.21.64 GO:0004252 ... P06873 36044956
    796119 8e52:AAA (2.8) BS02 CA 3.4.21.64 GO:0004252 ... P06873 36044956
    796120 8e52:AAA (2.8) BS03 CA 3.4.21.64 GO:0004252 ... P06873 36044956
    796121 8e52:AAA (2.8) BS04 CA 3.4.21.64 GO:0004252 ... P06873 36044956
    796122 8e53:AAA (1.7) BS01 CA 3.4.21.64 GO:0004252 ... P06873 36044956
    796123 8e53:AAA (1.7) BS02 CA 3.4.21.64 GO:0004252 ... P06873 36044956
    796124 8e56:A (2.8) BS01 CA ? GO:0005216 ... P07293 36417914
    796125 8e56:A (2.8) BS02 BBI ? GO:0005216 ... P07293 36417914
    796126 8e56:F (2.8) BS01 BMA ? N/A P13806 36417914
    796127 8e56:F (2.8) BS02 CA ? N/A P13806 36417914
    796128 8e57:A (2.8) BS01 CA ? GO:0005216 ... P07293 36417914
    796129 8e57:A (2.8) BS02 BBI ? GO:0005216 ... P07293 36417914
    796130 8e57:A (2.8) BS03 WFR ? GO:0005216 ... P07293 36417914
    796131 8e57:F (2.8) BS01 CA ? N/A P13806 36417914
    796132 8e58:A (3.0) BS01 CA ? GO:0005216 ... P07293 36417914
    796133 8e58:A (3.0) BS02 BBI ? GO:0005216 ... P07293 36417914
    796134 8e58:A (3.0) BS03 WFR ? GO:0005216 ... P07293 36417914
    796135 8e58:F (3.0) BS01 CA ? N/A P13806 36417914
    796136 8e59:A (3.1) BS01 BBI ? GO:0005216 ... Q01668 36417914
    796137 8e59:A (3.1) BS02 CA ? GO:0005216 ... Q01668 36417914
    796138 8e59:D (3.1) BS01 CA ? N/A P54289 36417914
    796139 8e5a:A (3.3) BS01 CA ? GO:0005216 ... Q01668 36417914
    796140 8e5a:D (3.3) BS01 CA ? N/A P54289 36417914
    796141 8e5b:A (3.3) BS01 BBI ? GO:0005216 ... Q01668 36417914
    796142 8e5b:A (3.3) BS02 WG6 ? GO:0005216 ... Q01668 36417914
    796143 8e5b:A (3.3) BS03 CA ? GO:0005216 ... Q01668 36417914
    796144 8e5b:D (3.3) BS01 CA ? N/A P54289 36417914
    796145 8e5c:A (2.2) BS01 4WI 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38472113
    796146 8e5d:A (2.39) BS01 dna 3.5.4.- N/A P0DUH5 37460895
    796147 8e5d:A (2.39) BS02 dna 3.5.4.- N/A P0DUH5 37460895
    796148 8e5d:A (2.39) BS03 ZN 3.5.4.- N/A P0DUH5 37460895
    796149 8e5d:A (2.39) BS04 MG 3.5.4.- N/A P0DUH5 37460895
    796150 8e5e:A (2.62) BS01 dna 3.5.4.- N/A P0DUH5 37460895
    796151 8e5e:A (2.62) BS02 dna 3.5.4.- N/A P0DUH5 37460895
    796152 8e5e:A (2.62) BS03 ZN 3.5.4.- N/A P0DUH5 37460895
    796153 8e5e:A (2.62) BS04 MG 3.5.4.- N/A P0DUH5 37460895
    796154 8e5f:A (3.8) BS01 HEC ? N/A A3MW92 37290436
    796155 8e5f:A (3.8) BS02 HEC ? N/A A3MW92 37290436
    796156 8e5f:A (3.8) BS03 HEC ? N/A A3MW92 37290436
    796157 8e5f:A (3.8) BS04 HEC ? N/A A3MW92 37290436
    796158 8e5g:A (3.9) BS01 HEC ? N/A F2KMU8 37290436
    796159 8e5g:A (3.9) BS02 HEC ? N/A F2KMU8 37290436
    796160 8e5g:A (3.9) BS03 HEC ? N/A F2KMU8 37290436
    796161 8e5g:A (3.9) BS04 HEC ? N/A F2KMU8 37290436
    796162 8e5h:A (1.27) BS01 FNR ? GO:0010181 ... V4RWU7 41158077
    796163 8e5i:A (1.7) BS01 FMN ? GO:0005829 ... A0ACD6B9Z0 41158077
    796164 8e5j:A (2.3) BS01 HEM ? GO:0004497 ... Q2IU02 36268769
    796165 8e5j:A (2.3) BS02 HX1 ? GO:0004497 ... Q2IU02 36268769
    796166 8e5k:A (4.2) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 36697824
    796167 8e5k:A (4.2) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 36697824
    796168 8e5k:A (4.2) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 36697824
    796169 8e5k:B (4.2) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36697824
    796170 8e5k:B (4.2) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 36697824
    796171 8e5k:B (4.2) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 36697824
    796172 8e5k:B (4.2) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36697824
    796173 8e5k:B (4.2) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36697824
    796174 8e5k:B (4.2) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36697824
    796175 8e5k:F (4.2) BS01 dna ? GO:0005515 ... P0AFG0 36697824
    796176 8e5l:a (4.2) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 36697824
    796177 8e5l:a (4.2) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    796178 8e5l:a (4.2) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    796179 8e5l:a (4.2) BS04 BEF 3.6.4.- GO:0003676 ... P0AG30 36697824
    796180 8e5l:b (4.2) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 36697824
    796181 8e5l:b (4.2) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    796182 8e5l:b (4.2) BS03 BEF 3.6.4.- GO:0003676 ... P0AG30 36697824
    796183 8e5l:b (4.2) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    796184 8e5l:c (4.2) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 36697824
    796185 8e5l:c (4.2) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    796186 8e5l:c (4.2) BS03 BEF 3.6.4.- GO:0003676 ... P0AG30 36697824
    796187 8e5l:c (4.2) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    796188 8e5l:d (4.2) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 36697824
    796189 8e5l:d (4.2) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    796190 8e5l:d (4.2) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    796191 8e5l:d (4.2) BS04 BEF 3.6.4.- GO:0003676 ... P0AG30 36697824
    796192 8e5l:e (4.2) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 36697824
    796193 8e5l:e (4.2) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    796194 8e5l:e (4.2) BS03 BEF 3.6.4.- GO:0003676 ... P0AG30 36697824
    796195 8e5l:e (4.2) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    796196 8e5l:f (4.2) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 36697824
    796197 8e5l:f (4.2) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    796198 8e5l:f (4.2) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    796199 8e5l:f (4.2) BS04 BEF 3.6.4.- GO:0003676 ... P0AG30 36697824
    796200 8e5m:A (1.84) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36822300

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).