SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3972 3973 3974 3975 3976 3977 3978 3979 3980 3981 3982 3983 3984 3985 3986 3987 3988 3989 3990 3991 3992 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    796201 8etc:a (3.1) BS01 rna ? GO:0002181 ... P36585 36423630
    796202 8etc:b (3.1) BS01 rna ? GO:0000054 ... O94659 36423630
    796203 8etc:c (3.1) BS01 rna ? GO:0002181 ... Q9UTP0 36423630
    796204 8etc:d (3.1) BS01 rna ? GO:0002181 ... Q9URX6 36423630
    796205 8etc:e (3.1) BS01 rna ? GO:0002181 ... P79015 36423630
    796206 8etc:f (3.1) BS01 rna ? GO:0002181 ... Q9USG6 36423630
    796207 8etc:g (3.1) BS01 rna ? GO:0002181 ... O42846 36423630
    796208 8etc:h (3.1) BS01 rna ? GO:0000463 ... O74904 36423630
    796209 8etc:h (3.1) BS02 rna ? GO:0000463 ... O74904 36423630
    796210 8etc:i (3.1) BS01 rna ? GO:0002181 ... O94658 36423630
    796211 8etc:j (3.1) BS01 rna ? GO:0002181 ... P05733 36423630
    796212 8etc:j (3.1) BS02 rna ? GO:0002181 ... P05733 36423630
    796213 8etc:j (3.1) BS03 ZN ? GO:0002181 ... P05733 36423630
    796214 8etc:k (3.1) BS01 rna ? GO:0002181 ... Q9USR7 36423630
    796215 8etc:r (3.1) BS01 rna ? GO:0000460 ... Q9UU79 36423630
    796216 8etc:s (3.1) BS01 rna ? GO:0003723 ... O74791 36423630
    796217 8etc:u (3.1) BS01 rna ? GO:0003674 ... Q10353 36423630
    796218 8etc:w (3.1) BS01 rna 2.1.1.- GO:0000451 ... O42832 36423630
    796219 8etc:y (3.1) BS01 rna ? GO:0000054 ... O94476 36423630
    796220 8etc:z (3.1) BS01 rna ? GO:0003674 ... Q96WW3 36423630
    796221 8etd:A (2.78) BS01 GDP ? GO:0000935 ... Q09914 36358328
    796222 8etd:B (2.78) BS01 MG ? GO:0000935 ... Q09914 36358328
    796223 8etd:B (2.78) BS02 GDP ? GO:0000935 ... Q09914 36358328
    796224 8ete:A (2.3) BS01 WU5 2.3.1.-
    3.5.1.-
    3.5.1.24
    3.5.1.74
    GO:0005515 ... Q9KK62 N/A
    796225 8ete:B (2.3) BS01 WU5 2.3.1.-
    3.5.1.-
    3.5.1.24
    3.5.1.74
    GO:0005515 ... Q9KK62 N/A
    796226 8etf:A (1.79) BS01 WU5 ? GO:0006629 ... A0A833FHE1 N/A
    796227 8etf:B (1.79) BS01 WU5 ? GO:0006629 ... A0A833FHE1 N/A
    796228 8etf:C (1.79) BS01 WU5 ? GO:0006629 ... A0A833FHE1 N/A
    796229 8etf:D (1.79) BS01 WU5 ? GO:0006629 ... A0A833FHE1 N/A
    796230 8etf:E (1.79) BS01 WU5 ? GO:0006629 ... A0A833FHE1 N/A
    796231 8etf:F (1.79) BS01 WU5 ? GO:0006629 ... A0A833FHE1 N/A
    796232 8etf:G (1.79) BS01 WU5 ? GO:0006629 ... A0A833FHE1 N/A
    796233 8etf:H (1.79) BS01 WU5 ? GO:0006629 ... A0A833FHE1 N/A
    796234 8etg:3 (3.4) BS01 rna ? GO:0000460 ... Q9UTE6 36423630
    796235 8etg:A (3.4) BS01 rna ? GO:0000027 ... Q9HGL6 36423630
    796236 8etg:B (3.4) BS01 rna ? GO:0002181 ... P40372 36423630
    796237 8etg:C (3.4) BS01 rna ? GO:0002181 ... Q9P784 36423630
    796238 8etg:C (3.4) BS02 rna ? GO:0002181 ... Q9P784 36423630
    796239 8etg:E (3.4) BS01 rna ? GO:0002181 ... P79071 36423630
    796240 8etg:F (3.4) BS01 rna ? GO:0000463 ... P25457 36423630
    796241 8etg:F (3.4) BS02 peptide ? GO:0000463 ... P25457 36423630
    796242 8etg:G (3.4) BS01 rna ? GO:0000470 ... O13672 36423630
    796243 8etg:G (3.4) BS02 rna ? GO:0000470 ... O13672 36423630
    796244 8etg:H (3.4) BS01 rna ? GO:0002181 ... Q10232 36423630
    796245 8etg:K (3.4) BS01 rna ? GO:0003723 ... Q9UT32 36423630
    796246 8etg:L (3.4) BS01 rna ? GO:0002181 ... O74175 36423630
    796247 8etg:L (3.4) BS02 rna ? GO:0002181 ... O74175 36423630
    796248 8etg:M (3.4) BS01 rna ? GO:0002181 ... O94238 36423630
    796249 8etg:N (3.4) BS01 rna ? GO:0002181 ... O74895 36423630
    796250 8etg:N (3.4) BS02 rna ? GO:0002181 ... O74895 36423630
    796251 8etg:O (3.4) BS01 rna ? GO:0002181 ... O42991 36423630
    796252 8etg:P (3.4) BS01 rna ? GO:0002181 ... O14339 36423630
    796253 8etg:P (3.4) BS02 rna ? GO:0002181 ... O14339 36423630
    796254 8etg:Q (3.4) BS01 rna ? GO:0002181 ... Q10192 36423630
    796255 8etg:R (3.4) BS01 rna ? GO:0002181 ... P05734 36423630
    796256 8etg:S (3.4) BS01 rna ? GO:0002181 ... P0CT68 36423630
    796257 8etg:S (3.4) BS02 peptide ? GO:0002181 ... P0CT68 36423630
    796258 8etg:U (3.4) BS01 rna ? GO:0002181 ... Q09668 36423630
    796259 8etg:V (3.4) BS01 rna ? GO:0002181 ... P0CT60 36423630
    796260 8etg:W (3.4) BS01 rna ? GO:0000027 ... Q9USZ6 36423630
    796261 8etg:X (3.4) BS01 rna ? GO:0002181 ... Q10330 36423630
    796262 8etg:X (3.4) BS02 rna ? GO:0002181 ... Q10330 36423630
    796263 8etg:Y (3.4) BS01 rna ? GO:0002181 ... P78946 36423630
    796264 8etg:Y (3.4) BS02 rna ? GO:0002181 ... P78946 36423630
    796265 8etg:a (3.4) BS01 rna ? GO:0002181 ... P36585 36423630
    796266 8etg:b (3.4) BS01 rna ? GO:0000054 ... O94659 36423630
    796267 8etg:d (3.4) BS01 rna ? GO:0002181 ... Q9URX6 36423630
    796268 8etg:e (3.4) BS01 rna ? GO:0002181 ... P79015 36423630
    796269 8etg:f (3.4) BS01 rna ? GO:0002181 ... Q9USG6 36423630
    796270 8etg:g (3.4) BS01 rna ? GO:0002181 ... O42846 36423630
    796271 8etg:h (3.4) BS01 rna ? GO:0000463 ... O74904 36423630
    796272 8etg:h (3.4) BS02 rna ? GO:0000463 ... O74904 36423630
    796273 8etg:i (3.4) BS01 rna ? GO:0002181 ... O94658 36423630
    796274 8etg:j (3.4) BS01 rna ? GO:0002181 ... P05733 36423630
    796275 8etg:j (3.4) BS02 rna ? GO:0002181 ... P05733 36423630
    796276 8etg:j (3.4) BS03 ZN ? GO:0002181 ... P05733 36423630
    796277 8etg:k (3.4) BS01 rna ? GO:0002181 ... Q9USR7 36423630
    796278 8etg:m (3.4) BS01 rna ? GO:0000463 ... O74399 36423630
    796279 8etg:n (3.4) BS01 rna ? GO:0000463 ... O60164 36423630
    796280 8etg:n (3.4) BS02 rna ? GO:0000463 ... O60164 36423630
    796281 8etg:o (3.4) BS01 rna ? GO:0003676 ... O74978 36423630
    796282 8etg:r (3.4) BS01 rna ? GO:0000460 ... Q9UU79 36423630
    796283 8etg:t (3.4) BS01 rna ? GO:0000463 ... P17937 36423630
    796284 8etg:t (3.4) BS02 rna ? GO:0000463 ... P17937 36423630
    796285 8etg:t (3.4) BS03 rna ? GO:0000463 ... P17937 36423630
    796286 8etg:v (3.4) BS01 rna ? GO:0003674 ... Q9Y7Z1 36423630
    796287 8etg:v (3.4) BS02 rna ? GO:0003674 ... Q9Y7Z1 36423630
    796288 8eth:3 (3.8) BS01 rna ? GO:0000460 ... Q9UTE6 36423630
    796289 8eth:5 (3.8) BS01 rna ? GO:0003674 ... O94698 36423630
    796290 8eth:A (3.8) BS01 rna ? GO:0000027 ... Q9HGL6 36423630
    796291 8eth:B (3.8) BS01 rna ? GO:0002181 ... P40372 36423630
    796292 8eth:C (3.8) BS01 rna ? GO:0002181 ... Q9P784 36423630
    796293 8eth:C (3.8) BS02 rna ? GO:0002181 ... Q9P784 36423630
    796294 8eth:D (3.8) BS01 rna 3.6.4.13 GO:0000463 ... Q09916 36423630
    796295 8eth:E (3.8) BS01 rna ? GO:0002181 ... P79071 36423630
    796296 8eth:F (3.8) BS01 rna ? GO:0000463 ... P25457 36423630
    796297 8eth:F (3.8) BS02 peptide ? GO:0000463 ... P25457 36423630
    796298 8eth:G (3.8) BS01 rna ? GO:0000470 ... O13672 36423630
    796299 8eth:G (3.8) BS02 rna ? GO:0000470 ... O13672 36423630
    796300 8eth:G (3.8) BS03 rna ? GO:0000470 ... O13672 36423630
    796301 8eth:H (3.8) BS01 rna ? GO:0002181 ... Q10232 36423630
    796302 8eth:K (3.8) BS01 rna ? GO:0003723 ... Q9UT32 36423630
    796303 8eth:L (3.8) BS01 rna ? GO:0002181 ... O74175 36423630
    796304 8eth:L (3.8) BS02 rna ? GO:0002181 ... O74175 36423630
    796305 8eth:M (3.8) BS01 rna ? GO:0002181 ... O94238 36423630
    796306 8eth:N (3.8) BS01 rna ? GO:0002181 ... O74895 36423630
    796307 8eth:N (3.8) BS02 rna ? GO:0002181 ... O74895 36423630
    796308 8eth:O (3.8) BS01 rna ? GO:0002181 ... O42991 36423630
    796309 8eth:P (3.8) BS01 rna ? GO:0002181 ... O14339 36423630
    796310 8eth:P (3.8) BS02 rna ? GO:0002181 ... O14339 36423630
    796311 8eth:Q (3.8) BS01 rna ? GO:0002181 ... Q10192 36423630
    796312 8eth:S (3.8) BS01 rna ? GO:0002181 ... P0CT68 36423630
    796313 8eth:S (3.8) BS02 peptide ? GO:0002181 ... P0CT68 36423630
    796314 8eth:Y (3.8) BS01 rna ? GO:0002181 ... P78946 36423630
    796315 8eth:Y (3.8) BS02 rna ? GO:0002181 ... P78946 36423630
    796316 8eth:e (3.8) BS01 rna ? GO:0002181 ... P79015 36423630
    796317 8eth:f (3.8) BS01 rna ? GO:0002181 ... Q9USG6 36423630
    796318 8eth:h (3.8) BS01 rna ? GO:0000463 ... O74904 36423630
    796319 8eth:h (3.8) BS02 rna ? GO:0000463 ... O74904 36423630
    796320 8eth:i (3.8) BS01 rna ? GO:0002181 ... O94658 36423630
    796321 8eth:j (3.8) BS01 rna ? GO:0002181 ... P05733 36423630
    796322 8eth:j (3.8) BS02 rna ? GO:0002181 ... P05733 36423630
    796323 8eth:j (3.8) BS03 ZN ? GO:0002181 ... P05733 36423630
    796324 8eth:m (3.8) BS01 rna ? GO:0000463 ... O74399 36423630
    796325 8eth:o (3.8) BS01 rna ? GO:0003676 ... O74978 36423630
    796326 8eth:t (3.8) BS01 rna ? GO:0000463 ... P17937 36423630
    796327 8eth:u (3.8) BS01 rna ? GO:0003674 ... Q10353 36423630
    796328 8eth:v (3.8) BS01 rna ? GO:0003674 ... Q9Y7Z1 36423630
    796329 8eth:v (3.8) BS02 rna ? GO:0003674 ... Q9Y7Z1 36423630
    796330 8eth:x (3.8) BS01 rna ? GO:0000460 ... O14180 36423630
    796331 8eth:x (3.8) BS02 rna ? GO:0000460 ... O14180 36423630
    796332 8eti:3 (3.7) BS01 rna ? GO:0000460 ... Q9UTE6 36423630
    796333 8eti:4 (3.7) BS01 rna ? GO:0003674 ... Q9Y7M6 36423630
    796334 8eti:5 (3.7) BS01 rna ? GO:0003674 ... O94698 36423630
    796335 8eti:A (3.7) BS01 rna ? GO:0000027 ... Q9HGL6 36423630
    796336 8eti:B (3.7) BS01 rna ? GO:0002181 ... P40372 36423630
    796337 8eti:C (3.7) BS01 rna ? GO:0002181 ... Q9P784 36423630
    796338 8eti:C (3.7) BS02 rna ? GO:0002181 ... Q9P784 36423630
    796339 8eti:D (3.7) BS01 rna 3.6.4.13 GO:0000463 ... Q09916 36423630
    796340 8eti:E (3.7) BS01 rna ? GO:0002181 ... P79071 36423630
    796341 8eti:F (3.7) BS01 rna ? GO:0000463 ... P25457 36423630
    796342 8eti:F (3.7) BS02 peptide ? GO:0000463 ... P25457 36423630
    796343 8eti:G (3.7) BS01 rna ? GO:0000470 ... O13672 36423630
    796344 8eti:G (3.7) BS02 rna ? GO:0000470 ... O13672 36423630
    796345 8eti:H (3.7) BS01 rna ? GO:0002181 ... Q10232 36423630
    796346 8eti:K (3.7) BS01 rna ? GO:0003723 ... Q9UT32 36423630
    796347 8eti:L (3.7) BS01 rna ? GO:0002181 ... O74175 36423630
    796348 8eti:M (3.7) BS01 rna ? GO:0002181 ... O94238 36423630
    796349 8eti:N (3.7) BS01 rna ? GO:0002181 ... O74895 36423630
    796350 8eti:N (3.7) BS02 rna ? GO:0002181 ... O74895 36423630
    796351 8eti:O (3.7) BS01 rna ? GO:0002181 ... O42991 36423630
    796352 8eti:P (3.7) BS01 rna ? GO:0002181 ... O14339 36423630
    796353 8eti:P (3.7) BS02 rna ? GO:0002181 ... O14339 36423630
    796354 8eti:Q (3.7) BS01 rna ? GO:0002181 ... Q10192 36423630
    796355 8eti:S (3.7) BS01 rna ? GO:0002181 ... P0CT68 36423630
    796356 8eti:S (3.7) BS02 peptide ? GO:0002181 ... P0CT68 36423630
    796357 8eti:V (3.7) BS01 rna ? GO:0002181 ... P0CT60 36423630
    796358 8eti:W (3.7) BS01 rna ? GO:0000027 ... Q9USZ6 36423630
    796359 8eti:X (3.7) BS01 rna ? GO:0002181 ... Q10330 36423630
    796360 8eti:X (3.7) BS02 rna ? GO:0002181 ... Q10330 36423630
    796361 8eti:Y (3.7) BS01 rna ? GO:0002181 ... P78946 36423630
    796362 8eti:Y (3.7) BS02 rna ? GO:0002181 ... P78946 36423630
    796363 8eti:b (3.7) BS01 rna ? GO:0000054 ... O94659 36423630
    796364 8eti:d (3.7) BS01 rna ? GO:0002181 ... Q9URX6 36423630
    796365 8eti:e (3.7) BS01 rna ? GO:0002181 ... P79015 36423630
    796366 8eti:f (3.7) BS01 rna ? GO:0002181 ... Q9USG6 36423630
    796367 8eti:h (3.7) BS01 rna ? GO:0000463 ... O74904 36423630
    796368 8eti:h (3.7) BS02 rna ? GO:0000463 ... O74904 36423630
    796369 8eti:i (3.7) BS01 rna ? GO:0002181 ... O94658 36423630
    796370 8eti:j (3.7) BS01 rna ? GO:0002181 ... P05733 36423630
    796371 8eti:j (3.7) BS02 rna ? GO:0002181 ... P05733 36423630
    796372 8eti:j (3.7) BS03 ZN ? GO:0002181 ... P05733 36423630
    796373 8eti:m (3.7) BS01 rna ? GO:0000463 ... O74399 36423630
    796374 8eti:n (3.7) BS01 rna ? GO:0000463 ... O60164 36423630
    796375 8eti:n (3.7) BS02 rna ? GO:0000463 ... O60164 36423630
    796376 8eti:o (3.7) BS01 rna ? GO:0003676 ... O74978 36423630
    796377 8eti:r (3.7) BS01 rna ? GO:0000460 ... Q9UU79 36423630
    796378 8eti:t (3.7) BS01 rna ? GO:0000463 ... P17937 36423630
    796379 8eti:u (3.7) BS01 rna ? GO:0003674 ... Q10353 36423630
    796380 8eti:v (3.7) BS01 rna ? GO:0003674 ... Q9Y7Z1 36423630
    796381 8eti:x (3.7) BS01 rna ? GO:0000460 ... O14180 36423630
    796382 8etj:3 (3.2) BS01 rna ? GO:0000460 ... Q9UTE6 36423630
    796383 8etj:B (3.2) BS01 rna ? GO:0002181 ... P40372 36423630
    796384 8etj:C (3.2) BS01 rna ? GO:0002181 ... Q9P784 36423630
    796385 8etj:C (3.2) BS02 rna ? GO:0002181 ... Q9P784 36423630
    796386 8etj:C (3.2) BS03 peptide ? GO:0002181 ... Q9P784 36423630
    796387 8etj:E (3.2) BS01 rna ? GO:0002181 ... P79071 36423630
    796388 8etj:F (3.2) BS01 rna ? GO:0000463 ... P25457 36423630
    796389 8etj:F (3.2) BS02 peptide ? GO:0000463 ... P25457 36423630
    796390 8etj:G (3.2) BS01 rna ? GO:0000470 ... O13672 36423630
    796391 8etj:G (3.2) BS02 rna ? GO:0000470 ... O13672 36423630
    796392 8etj:H (3.2) BS01 rna ? GO:0002181 ... Q10232 36423630
    796393 8etj:L (3.2) BS01 rna ? GO:0002181 ... O74175 36423630
    796394 8etj:L (3.2) BS02 rna ? GO:0002181 ... O74175 36423630
    796395 8etj:M (3.2) BS01 rna ? GO:0002181 ... O94238 36423630
    796396 8etj:N (3.2) BS01 rna ? GO:0002181 ... O74895 36423630
    796397 8etj:N (3.2) BS02 rna ? GO:0002181 ... O74895 36423630
    796398 8etj:O (3.2) BS01 rna ? GO:0002181 ... O42991 36423630
    796399 8etj:P (3.2) BS01 rna ? GO:0002181 ... O14339 36423630
    796400 8etj:P (3.2) BS02 rna ? GO:0002181 ... O14339 36423630

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).