SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    796801 8euj:h (3.36) BS02 dna N/A N/A N/A 37384669
    796802 8euj:k (3.36) BS01 dna N/A N/A N/A 37384669
    796803 8euj:k (3.36) BS02 dna N/A N/A N/A 37384669
    796804 8euk:A (1.98) BS01 HEM 1.14.-.- GO:0004497 ... P33006 36779970
    796805 8eul:A (2.24) BS01 HEM 1.14.-.- GO:0004497 ... P33006 36779970
    796806 8eul:A (2.24) BS02 XGE 1.14.-.- GO:0004497 ... P33006 36779970
    796807 8eum:A (2.1) BS01 HEM ? GO:0019825 ... Q9YFF4 36948184
    796808 8eum:B (2.1) BS01 HEM ? GO:0019825 ... Q9YFF4 36948184
    796809 8eum:C (2.1) BS01 HEM ? GO:0019825 ... Q9YFF4 36948184
    796810 8eum:D (2.1) BS01 HEM ? GO:0019825 ... Q9YFF4 36948184
    796811 8eun:A (2.5) BS01 WUF ? GO:0019825 ... Q9YFF4 36948184
    796812 8eun:B (2.5) BS01 WUF ? GO:0019825 ... Q9YFF4 36948184
    796813 8eup:3 (3.1) BS01 rna ? GO:0000460 ... Q9UTE6 36423630
    796814 8eup:5 (3.1) BS01 rna ? GO:0003674 ... O94698 36423630
    796815 8eup:A (3.1) BS01 rna ? GO:0000027 ... Q9HGL6 36423630
    796816 8eup:B (3.1) BS01 rna ? GO:0002181 ... P40372 36423630
    796817 8eup:C (3.1) BS01 rna ? GO:0002181 ... Q9P784 36423630
    796818 8eup:C (3.1) BS02 rna ? GO:0002181 ... Q9P784 36423630
    796819 8eup:D (3.1) BS01 rna 3.6.4.13 GO:0000463 ... Q09916 36423630
    796820 8eup:E (3.1) BS01 rna ? GO:0002181 ... P79071 36423630
    796821 8eup:F (3.1) BS01 rna ? GO:0000463 ... P25457 36423630
    796822 8eup:F (3.1) BS02 peptide ? GO:0000463 ... P25457 36423630
    796823 8eup:G (3.1) BS01 rna ? GO:0000470 ... O13672 36423630
    796824 8eup:G (3.1) BS02 rna ? GO:0000470 ... O13672 36423630
    796825 8eup:G (3.1) BS03 rna ? GO:0000470 ... O13672 36423630
    796826 8eup:H (3.1) BS01 rna ? GO:0002181 ... Q10232 36423630
    796827 8eup:K (3.1) BS01 rna ? GO:0003723 ... Q9UT32 36423630
    796828 8eup:L (3.1) BS01 rna ? GO:0002181 ... O74175 36423630
    796829 8eup:L (3.1) BS02 rna ? GO:0002181 ... O74175 36423630
    796830 8eup:M (3.1) BS01 rna ? GO:0002181 ... O94238 36423630
    796831 8eup:N (3.1) BS01 rna ? GO:0002181 ... O74895 36423630
    796832 8eup:N (3.1) BS02 rna ? GO:0002181 ... O74895 36423630
    796833 8eup:O (3.1) BS01 rna ? GO:0002181 ... O42991 36423630
    796834 8eup:P (3.1) BS01 rna ? GO:0002181 ... O14339 36423630
    796835 8eup:P (3.1) BS02 rna ? GO:0002181 ... O14339 36423630
    796836 8eup:Q (3.1) BS01 rna ? GO:0002181 ... Q10192 36423630
    796837 8eup:S (3.1) BS01 rna ? GO:0002181 ... P0CT68 36423630
    796838 8eup:S (3.1) BS02 peptide ? GO:0002181 ... P0CT68 36423630
    796839 8eup:V (3.1) BS01 rna ? GO:0002181 ... P0CT60 36423630
    796840 8eup:Y (3.1) BS01 rna ? GO:0002181 ... P78946 36423630
    796841 8eup:Y (3.1) BS02 rna ? GO:0002181 ... P78946 36423630
    796842 8eup:b (3.1) BS01 rna ? GO:0000054 ... O94659 36423630
    796843 8eup:e (3.1) BS01 rna ? GO:0002181 ... P79015 36423630
    796844 8eup:f (3.1) BS01 rna ? GO:0002181 ... Q9USG6 36423630
    796845 8eup:h (3.1) BS01 rna ? GO:0000463 ... O74904 36423630
    796846 8eup:h (3.1) BS02 rna ? GO:0000463 ... O74904 36423630
    796847 8eup:i (3.1) BS01 rna ? GO:0002181 ... O94658 36423630
    796848 8eup:j (3.1) BS01 rna ? GO:0002181 ... P05733 36423630
    796849 8eup:j (3.1) BS02 rna ? GO:0002181 ... P05733 36423630
    796850 8eup:j (3.1) BS03 ZN ? GO:0002181 ... P05733 36423630
    796851 8eup:m (3.1) BS01 rna ? GO:0000463 ... O74399 36423630
    796852 8eup:o (3.1) BS01 rna ? GO:0003676 ... O74978 36423630
    796853 8eup:r (3.1) BS01 rna ? GO:0000460 ... Q9UU79 36423630
    796854 8eup:v (3.1) BS01 rna ? GO:0003674 ... Q9Y7Z1 36423630
    796855 8eup:v (3.1) BS02 rna ? GO:0003674 ... Q9Y7Z1 36423630
    796856 8eup:x (3.1) BS01 rna ? GO:0000460 ... O14180 36423630
    796857 8eur:A (2.61) BS01 WAS 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    796858 8eur:B (2.61) BS01 WAS 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    796859 8eut:A (2.8) BS01 WV5 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    796860 8eut:B (2.8) BS01 WV5 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    796861 8eux:A (2.8) BS01 WV9 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    796862 8eux:B (2.8) BS01 WV9 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    796863 8euy:3 (3.0) BS01 rna ? GO:0000460 ... Q9UTE6 36423630
    796864 8euy:5 (3.0) BS01 rna ? GO:0003674 ... O94698 36423630
    796865 8euy:A (3.0) BS01 rna ? GO:0000027 ... Q9HGL6 36423630
    796866 8euy:B (3.0) BS01 rna ? GO:0002181 ... P40372 36423630
    796867 8euy:C (3.0) BS01 rna ? GO:0002181 ... Q9P784 36423630
    796868 8euy:C (3.0) BS02 rna ? GO:0002181 ... Q9P784 36423630
    796869 8euy:C (3.0) BS03 peptide ? GO:0002181 ... Q9P784 36423630
    796870 8euy:D (3.0) BS01 rna 3.6.4.13 GO:0000463 ... Q09916 36423630
    796871 8euy:E (3.0) BS01 rna ? GO:0002181 ... P79071 36423630
    796872 8euy:F (3.0) BS01 rna ? GO:0000463 ... P25457 36423630
    796873 8euy:F (3.0) BS02 peptide ? GO:0000463 ... P25457 36423630
    796874 8euy:G (3.0) BS01 rna ? GO:0000470 ... O13672 36423630
    796875 8euy:G (3.0) BS02 rna ? GO:0000470 ... O13672 36423630
    796876 8euy:G (3.0) BS03 rna ? GO:0000470 ... O13672 36423630
    796877 8euy:H (3.0) BS01 rna ? GO:0002181 ... Q10232 36423630
    796878 8euy:K (3.0) BS01 rna ? GO:0003723 ... Q9UT32 36423630
    796879 8euy:L (3.0) BS01 rna ? GO:0002181 ... O74175 36423630
    796880 8euy:L (3.0) BS02 rna ? GO:0002181 ... O74175 36423630
    796881 8euy:M (3.0) BS01 rna ? GO:0002181 ... O94238 36423630
    796882 8euy:N (3.0) BS01 rna ? GO:0002181 ... O74895 36423630
    796883 8euy:N (3.0) BS02 rna ? GO:0002181 ... O74895 36423630
    796884 8euy:O (3.0) BS01 rna ? GO:0002181 ... O42991 36423630
    796885 8euy:P (3.0) BS01 rna ? GO:0002181 ... O14339 36423630
    796886 8euy:P (3.0) BS02 rna ? GO:0002181 ... O14339 36423630
    796887 8euy:Q (3.0) BS01 rna ? GO:0002181 ... Q10192 36423630
    796888 8euy:S (3.0) BS01 rna ? GO:0002181 ... P0CT68 36423630
    796889 8euy:S (3.0) BS02 peptide ? GO:0002181 ... P0CT68 36423630
    796890 8euy:V (3.0) BS01 rna ? GO:0002181 ... P0CT60 36423630
    796891 8euy:Y (3.0) BS01 rna ? GO:0002181 ... P78946 36423630
    796892 8euy:Y (3.0) BS02 rna ? GO:0002181 ... P78946 36423630
    796893 8euy:b (3.0) BS01 rna ? GO:0000054 ... O94659 36423630
    796894 8euy:e (3.0) BS01 rna ? GO:0002181 ... P79015 36423630
    796895 8euy:f (3.0) BS01 rna ? GO:0002181 ... Q9USG6 36423630
    796896 8euy:h (3.0) BS01 rna ? GO:0000463 ... O74904 36423630
    796897 8euy:h (3.0) BS02 rna ? GO:0000463 ... O74904 36423630
    796898 8euy:i (3.0) BS01 rna ? GO:0002181 ... O94658 36423630
    796899 8euy:j (3.0) BS01 rna ? GO:0002181 ... P05733 36423630
    796900 8euy:j (3.0) BS02 rna ? GO:0002181 ... P05733 36423630
    796901 8euy:j (3.0) BS03 ZN ? GO:0002181 ... P05733 36423630
    796902 8euy:m (3.0) BS01 rna ? GO:0000463 ... O74399 36423630
    796903 8euy:o (3.0) BS01 rna ? GO:0003676 ... O74978 36423630
    796904 8euy:o (3.0) BS02 peptide ? GO:0003676 ... O74978 36423630
    796905 8euy:r (3.0) BS01 rna ? GO:0000460 ... Q9UU79 36423630
    796906 8euy:v (3.0) BS01 rna ? GO:0003674 ... Q9Y7Z1 36423630
    796907 8euy:v (3.0) BS02 rna ? GO:0003674 ... Q9Y7Z1 36423630
    796908 8euy:x (3.0) BS01 rna ? GO:0000460 ... O14180 36423630
    796909 8euy:x (3.0) BS02 rna ? GO:0000460 ... O14180 36423630
    796910 8euy:y (3.0) BS01 rna ? GO:0000054 ... O94476 36423630
    796911 8ev1:A (1.83) BS01 peptide ? N/A P03372 36516582
    796912 8ev1:A (1.83) BS02 WVW ? N/A P03372 36516582
    796913 8ev1:A (1.83) BS03 WVR ? N/A P03372 36516582
    796914 8ev1:B (1.83) BS01 peptide ? N/A P03372 36516582
    796915 8ev1:B (1.83) BS02 WVW ? N/A P03372 36516582
    796916 8ev2:A (2.01) BS01 peptide ? N/A P03372 36516582
    796917 8ev2:A (2.01) BS02 LYQ ? N/A P03372 36516582
    796918 8ev2:A (2.01) BS03 LYQ ? N/A P03372 36516582
    796919 8ev2:A (2.01) BS04 WVE ? N/A P03372 36516582
    796920 8ev2:A (2.01) BS05 WVE ? N/A P03372 36516582
    796921 8ev2:B (2.01) BS01 peptide ? N/A P03372 36516582
    796922 8ev2:B (2.01) BS02 LYQ ? N/A P03372 36516582
    796923 8ev2:B (2.01) BS03 LYQ ? N/A P03372 36516582
    796924 8ev2:B (2.01) BS04 WVE ? N/A P03372 36516582
    796925 8ev2:B (2.01) BS05 WVE ? N/A P03372 36516582
    796926 8ev3:3 (3.0) BS01 rna ? GO:0000460 ... Q9UTE6 36423630
    796927 8ev3:4 (3.0) BS01 rna ? GO:0003674 ... Q9Y7M6 36423630
    796928 8ev3:5 (3.0) BS01 rna ? GO:0003674 ... O94698 36423630
    796929 8ev3:A (3.0) BS01 rna ? GO:0000027 ... Q9HGL6 36423630
    796930 8ev3:B (3.0) BS01 rna ? GO:0002181 ... P40372 36423630
    796931 8ev3:C (3.0) BS01 rna ? GO:0002181 ... Q9P784 36423630
    796932 8ev3:C (3.0) BS02 rna ? GO:0002181 ... Q9P784 36423630
    796933 8ev3:D (3.0) BS01 rna 3.6.4.13 GO:0000463 ... Q09916 36423630
    796934 8ev3:E (3.0) BS01 rna ? GO:0002181 ... P79071 36423630
    796935 8ev3:F (3.0) BS01 rna ? GO:0000463 ... P25457 36423630
    796936 8ev3:F (3.0) BS02 peptide ? GO:0000463 ... P25457 36423630
    796937 8ev3:G (3.0) BS01 rna ? GO:0000470 ... O13672 36423630
    796938 8ev3:G (3.0) BS02 rna ? GO:0000470 ... O13672 36423630
    796939 8ev3:G (3.0) BS03 rna ? GO:0000470 ... O13672 36423630
    796940 8ev3:H (3.0) BS01 rna ? GO:0002181 ... Q10232 36423630
    796941 8ev3:K (3.0) BS01 rna ? GO:0003723 ... Q9UT32 36423630
    796942 8ev3:L (3.0) BS01 rna ? GO:0002181 ... O74175 36423630
    796943 8ev3:L (3.0) BS02 rna ? GO:0002181 ... O74175 36423630
    796944 8ev3:M (3.0) BS01 rna ? GO:0002181 ... O94238 36423630
    796945 8ev3:N (3.0) BS01 rna ? GO:0002181 ... O74895 36423630
    796946 8ev3:N (3.0) BS02 rna ? GO:0002181 ... O74895 36423630
    796947 8ev3:O (3.0) BS01 rna ? GO:0002181 ... O42991 36423630
    796948 8ev3:P (3.0) BS01 rna ? GO:0002181 ... O14339 36423630
    796949 8ev3:P (3.0) BS02 rna ? GO:0002181 ... O14339 36423630
    796950 8ev3:Q (3.0) BS01 rna ? GO:0002181 ... Q10192 36423630
    796951 8ev3:S (3.0) BS01 rna ? GO:0002181 ... P0CT68 36423630
    796952 8ev3:S (3.0) BS02 peptide ? GO:0002181 ... P0CT68 36423630
    796953 8ev3:Y (3.0) BS01 rna ? GO:0002181 ... P78946 36423630
    796954 8ev3:Y (3.0) BS02 rna ? GO:0002181 ... P78946 36423630
    796955 8ev3:e (3.0) BS01 rna ? GO:0002181 ... P79015 36423630
    796956 8ev3:f (3.0) BS01 rna ? GO:0002181 ... Q9USG6 36423630
    796957 8ev3:h (3.0) BS01 rna ? GO:0000463 ... O74904 36423630
    796958 8ev3:h (3.0) BS02 rna ? GO:0000463 ... O74904 36423630
    796959 8ev3:i (3.0) BS01 rna ? GO:0002181 ... O94658 36423630
    796960 8ev3:j (3.0) BS01 rna ? GO:0002181 ... P05733 36423630
    796961 8ev3:j (3.0) BS02 rna ? GO:0002181 ... P05733 36423630
    796962 8ev3:j (3.0) BS03 ZN ? GO:0002181 ... P05733 36423630
    796963 8ev3:m (3.0) BS01 rna ? GO:0000463 ... O74399 36423630
    796964 8ev3:n (3.0) BS01 rna ? GO:0000463 ... O60164 36423630
    796965 8ev3:o (3.0) BS01 rna ? GO:0003676 ... O74978 36423630
    796966 8ev3:r (3.0) BS01 rna ? GO:0000460 ... Q9UU79 36423630
    796967 8ev3:t (3.0) BS01 rna ? GO:0000463 ... P17937 36423630
    796968 8ev3:t (3.0) BS02 rna ? GO:0000463 ... P17937 36423630
    796969 8ev3:v (3.0) BS01 rna ? GO:0003674 ... Q9Y7Z1 36423630
    796970 8ev3:v (3.0) BS02 rna ? GO:0003674 ... Q9Y7Z1 36423630
    796971 8ev3:x (3.0) BS01 rna ? GO:0000460 ... O14180 36423630
    796972 8ev3:x (3.0) BS02 rna ? GO:0000460 ... O14180 36423630
    796973 8ev5:A (1.65) BS01 E64 ? N/A A2FQ38 37585473
    796974 8ev6:10 (2.946) BS01 rna ? GO:0003735 ... P60493 37537169
    796975 8ev6:10 (2.946) BS02 rna ? GO:0003735 ... P60493 37537169
    796976 8ev6:11 (2.946) BS01 rna ? GO:0003735 ... P60494 37537169
    796977 8ev6:12 (2.946) BS01 rna ? GO:0003735 ... Q5SHP6 37537169
    796978 8ev6:13 (2.946) BS01 rna ? GO:0003735 ... Q5SHQ6 37537169
    796979 8ev6:13 (2.946) BS02 rna ? GO:0003735 ... Q5SHQ6 37537169
    796980 8ev6:14 (2.946) BS01 rna ? GO:0003735 ... Q5SJE1 37537169
    796981 8ev6:14 (2.946) BS02 ZN ? GO:0003735 ... Q5SJE1 37537169
    796982 8ev6:15 (2.946) BS01 rna ? GO:0003735 ... P80339 37537169
    796983 8ev6:15 (2.946) BS02 ZN ? GO:0003735 ... P80339 37537169
    796984 8ev6:16 (2.946) BS01 rna ? GO:0000049 ... P35871 37537169
    796985 8ev6:16 (2.946) BS02 ZN ? GO:0000049 ... P35871 37537169
    796986 8ev6:17 (2.946) BS01 rna ? GO:0003735 ... P80340 37537169
    796987 8ev6:18 (2.946) BS01 rna ? GO:0003735 ... Q5SKU1 37537169
    796988 8ev6:18 (2.946) BS02 MG ? GO:0003735 ... Q5SKU1 37537169
    796989 8ev6:18 (2.946) BS03 MG ? GO:0003735 ... Q5SKU1 37537169
    796990 8ev6:18 (2.946) BS04 MG ? GO:0003735 ... Q5SKU1 37537169
    796991 8ev6:19 (2.946) BS01 rna ? GO:0003735 ... Q5SHR2 37537169
    796992 8ev6:19 (2.946) BS02 ZN ? GO:0003735 ... Q5SHR2 37537169
    796993 8ev6:1D (2.946) BS01 rna ? GO:0002181 ... P60405 37537169
    796994 8ev6:1D (2.946) BS02 rna ? GO:0002181 ... P60405 37537169
    796995 8ev6:1D (2.946) BS03 MG ? GO:0002181 ... P60405 37537169
    796996 8ev6:1D (2.946) BS04 MG ? GO:0002181 ... P60405 37537169
    796997 8ev6:1D (2.946) BS05 MG ? GO:0002181 ... P60405 37537169
    796998 8ev6:1D (2.946) BS06 MG ? GO:0002181 ... P60405 37537169
    796999 8ev6:1E (2.946) BS01 rna ? GO:0003735 ... Q5SHN8 37537169
    797000 8ev6:1E (2.946) BS02 MG ? GO:0003735 ... Q5SHN8 37537169

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).