SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    797401 8evi:A (2.64) BS01 dna ? GO:0000786 ... P68431 38267599
    797402 8evi:A (2.64) BS02 dna ? GO:0000786 ... P68431 38267599
    797403 8evi:B (2.64) BS01 dna ? GO:0000781 ... P62805 38267599
    797404 8evi:B (2.64) BS02 dna ? GO:0000781 ... P62805 38267599
    797405 8evi:C (2.64) BS01 dna ? GO:0000786 ... Q16777 38267599
    797406 8evi:C (2.64) BS02 dna ? GO:0000786 ... Q16777 38267599
    797407 8evi:D (2.64) BS01 dna ? GO:0000786 ... Q16778 38267599
    797408 8evi:D (2.64) BS02 dna ? GO:0000786 ... Q16778 38267599
    797409 8evi:E (2.64) BS01 dna ? GO:0000786 ... P68431 38267599
    797410 8evi:E (2.64) BS02 dna ? GO:0000786 ... P68431 38267599
    797411 8evi:F (2.64) BS01 dna ? GO:0000781 ... P62805 38267599
    797412 8evi:F (2.64) BS02 dna ? GO:0000781 ... P62805 38267599
    797413 8evi:G (2.64) BS01 dna ? GO:0000786 ... Q16777 38267599
    797414 8evi:G (2.64) BS02 dna ? GO:0000786 ... Q16777 38267599
    797415 8evi:H (2.64) BS01 dna ? GO:0000786 ... Q16778 38267599
    797416 8evi:H (2.64) BS02 dna ? GO:0000786 ... Q16778 38267599
    797417 8evi:O (2.64) BS01 dna ? GO:0000122 ... P17433 38267599
    797418 8evi:O (2.64) BS02 dna ? GO:0000122 ... P17433 38267599
    797419 8evj:A (4.1) BS01 dna ? GO:0000786 ... P68431 38267599
    797420 8evj:A (4.1) BS02 dna ? GO:0000786 ... P68431 38267599
    797421 8evj:B (4.1) BS01 dna ? GO:0000781 ... P62805 38267599
    797422 8evj:B (4.1) BS02 dna ? GO:0000781 ... P62805 38267599
    797423 8evj:C (4.1) BS01 dna ? GO:0000786 ... Q16777 38267599
    797424 8evj:C (4.1) BS02 dna ? GO:0000786 ... Q16777 38267599
    797425 8evj:D (4.1) BS01 dna ? GO:0000786 ... Q16778 38267599
    797426 8evj:D (4.1) BS02 dna ? GO:0000786 ... Q16778 38267599
    797427 8evj:E (4.1) BS01 dna ? GO:0000786 ... P68431 38267599
    797428 8evj:E (4.1) BS02 dna ? GO:0000786 ... P68431 38267599
    797429 8evj:F (4.1) BS01 dna ? GO:0000781 ... P62805 38267599
    797430 8evj:F (4.1) BS02 dna ? GO:0000781 ... P62805 38267599
    797431 8evj:G (4.1) BS01 dna ? GO:0000786 ... Q16777 38267599
    797432 8evj:G (4.1) BS02 dna ? GO:0000786 ... Q16777 38267599
    797433 8evj:H (4.1) BS01 dna ? GO:0000786 ... Q16778 38267599
    797434 8evj:O (4.1) BS01 dna ? GO:0000122 ... P17433 38267599
    797435 8evj:O (4.1) BS02 dna ? GO:0000122 ... P17433 38267599
    797436 8evk:A (1.49) BS01 PE0 ? GO:0004150 ... B5Z9C8 36820301
    797437 8evo:B (2.4) BS01 UN9 1.14.11.77 GO:0004065 ... P9WKZ1 N/A
    797438 8evp:AA (2.38) BS01 rna ? GO:0002181 ... P0CX45 37595043
    797439 8evp:AA (2.38) BS02 rna ? GO:0002181 ... P0CX45 37595043
    797440 8evp:AB (2.38) BS01 rna ? GO:0000027 ... P14126 37595043
    797441 8evp:AC (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    797442 8evp:AC (2.38) BS02 rna ? GO:0003735 ... N/A 37595043
    797443 8evp:AC (2.38) BS03 MG ? GO:0003735 ... N/A 37595043
    797444 8evp:AD (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    797445 8evp:AD (2.38) BS02 rna ? GO:0003735 ... N/A 37595043
    797446 8evp:AE (2.38) BS01 rna ? GO:0000027 ... Q02326 37595043
    797447 8evp:AF (2.38) BS01 rna ? GO:0000463 ... P05737 37595043
    797448 8evp:AF (2.38) BS02 rna ? GO:0000463 ... P05737 37595043
    797449 8evp:AG (2.38) BS01 rna ? GO:0000470 ... P17076 37595043
    797450 8evp:AG (2.38) BS02 rna ? GO:0000470 ... P17076 37595043
    797451 8evp:AH (2.38) BS01 rna ? GO:0002181 ... P05738 37595043
    797452 8evp:AI (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    797453 8evp:AI (2.38) BS02 rna ? GO:0003735 ... N/A 37595043
    797454 8evp:AJ (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    797455 8evp:AJ (2.38) BS02 rna ? GO:0003735 ... N/A 37595043
    797456 8evp:AL (2.38) BS01 rna ? GO:0002181 ... Q12690 37595043
    797457 8evp:AL (2.38) BS02 rna ? GO:0002181 ... Q12690 37595043
    797458 8evp:AM (2.38) BS01 rna ? GO:0000027 ... P36105 37595043
    797459 8evp:AN (2.38) BS01 rna ? GO:0002181 ... P05748 37595043
    797460 8evp:AN (2.38) BS02 rna ? GO:0002181 ... P05748 37595043
    797461 8evp:AN (2.38) BS03 MG ? GO:0002181 ... P05748 37595043
    797462 8evp:AO (2.38) BS01 rna ? GO:0000470 ... P26784 37595043
    797463 8evp:AP (2.38) BS01 rna ? GO:0000448 ... P05740 37595043
    797464 8evp:AP (2.38) BS02 rna ? GO:0000448 ... P05740 37595043
    797465 8evp:AP (2.38) BS03 MG ? GO:0000448 ... P05740 37595043
    797466 8evp:AQ (2.38) BS01 rna ? GO:0002181 ... P0CX49 37595043
    797467 8evp:AR (2.38) BS01 rna ? GO:0002181 ... P0CX82 37595043
    797468 8evp:AR (2.38) BS02 rna ? GO:0002181 ... P0CX82 37595043
    797469 8evp:AS (2.38) BS01 rna ? GO:0003735 ... B3LMD0 37595043
    797470 8evp:AS (2.38) BS02 rna ? GO:0003735 ... B3LMD0 37595043
    797471 8evp:AT (2.38) BS01 rna ? GO:0002181 ... Q02753 37595043
    797472 8evp:AT (2.38) BS02 rna ? GO:0002181 ... Q02753 37595043
    797473 8evp:AU (2.38) BS01 rna ? GO:0002181 ... P05749 37595043
    797474 8evp:AV (2.38) BS01 rna ? GO:0002181 ... P0CX41 37595043
    797475 8evp:AV (2.38) BS02 rna ? GO:0002181 ... P0CX41 37595043
    797476 8evp:AW (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    797477 8evp:AX (2.38) BS01 rna ? GO:0000027 ... P04456 37595043
    797478 8evp:AX (2.38) BS02 rna ? GO:0000027 ... P04456 37595043
    797479 8evp:AY (2.38) BS01 rna ? GO:0002181 ... P05743 37595043
    797480 8evp:AY (2.38) BS02 rna ? GO:0002181 ... P05743 37595043
    797481 8evp:AZ (2.38) BS01 rna ? GO:0002181 ... P0C2H6 37595043
    797482 8evp:Aa (2.38) BS01 rna ? GO:0002181 ... P02406 37595043
    797483 8evp:Ab (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    797484 8evp:Ac (2.38) BS01 rna ? GO:0002181 ... P14120 37595043
    797485 8evp:Ad (2.38) BS01 rna ? GO:0002181 ... P0C2H8 37595043
    797486 8evp:Ae (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    797487 8evp:Af (2.38) BS01 rna ? GO:0000027 ... P05744 37595043
    797488 8evp:Af (2.38) BS02 MG ? GO:0000027 ... P05744 37595043
    797489 8evp:Ag (2.38) BS01 rna ? GO:0002181 ... P87262 37595043
    797490 8evp:Ah (2.38) BS01 rna ? GO:0000463 ... P0CX84 37595043
    797491 8evp:Ah (2.38) BS02 rna ? GO:0000463 ... P0CX84 37595043
    797492 8evp:Ai (2.38) BS01 rna ? GO:0002181 ... P05745 37595043
    797493 8evp:Aj (2.38) BS01 rna ? GO:0000448 ... P49166 37595043
    797494 8evp:Aj (2.38) BS02 rna ? GO:0000448 ... P49166 37595043
    797495 8evp:Aj (2.38) BS03 MG ? GO:0000448 ... P49166 37595043
    797496 8evp:Ak (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    797497 8evp:Al (2.38) BS01 rna ? GO:0002181 ... P04650 37595043
    797498 8evp:Al (2.38) BS02 rna ? GO:0002181 ... P04650 37595043
    797499 8evp:Am (2.38) BS01 rna ? GO:0000027 ... P0CH08 37595043
    797500 8evp:Ao (2.38) BS01 rna ? GO:0002181 ... P0CX27 37595043
    797501 8evp:Ao (2.38) BS02 ZN ? GO:0002181 ... P0CX27 37595043
    797502 8evp:Ap (2.38) BS01 rna ? GO:0002181 ... P0CX25 37595043
    797503 8evp:BA (2.38) BS01 rna ? GO:0000028 ... P32905 37595043
    797504 8evp:BB (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    797505 8evp:BB (2.38) BS02 rna ? GO:0003735 ... N/A 37595043
    797506 8evp:BC (2.38) BS01 rna ? GO:0003723 ... N/A 37595043
    797507 8evp:BD (2.38) BS01 rna ? GO:0003723 ... N/A 37595043
    797508 8evp:BE (2.38) BS01 rna ? GO:0002181 ... P0CX35 37595043
    797509 8evp:BE (2.38) BS02 MG ? GO:0002181 ... P0CX35 37595043
    797510 8evp:BF (2.38) BS01 rna ? GO:0003723 ... A0A1L4AA68 37595043
    797511 8evp:BF (2.38) BS02 rna ? GO:0003723 ... A0A1L4AA68 37595043
    797512 8evp:BG (2.38) BS01 rna ? GO:0000462 ... P0CX37 37595043
    797513 8evp:BH (2.38) BS01 rna ? GO:0002181 ... P26786 37595043
    797514 8evp:BI (2.38) BS01 rna ? GO:0000462 ... P0CX39 37595043
    797515 8evp:BI (2.38) BS02 rna ? GO:0000462 ... P0CX39 37595043
    797516 8evp:BJ (2.38) BS01 rna ? GO:0000462 ... O13516 37595043
    797517 8evp:BK (2.38) BS01 rna ? GO:0000054 ... Q08745 37595043
    797518 8evp:BL (2.38) BS01 rna ? GO:0000028 ... P0CX47 37595043
    797519 8evp:BM (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    797520 8evp:BN (2.38) BS01 rna ? GO:0000462 ... P05756 37595043
    797521 8evp:BN (2.38) BS02 rna ? GO:0000462 ... P05756 37595043
    797522 8evp:BO (2.38) BS01 rna ? GO:0000028 ... P06367 37595043
    797523 8evp:BP (2.38) BS01 rna ? GO:0003723 ... N/A 37595043
    797524 8evp:BQ (2.38) BS01 rna ? GO:0000462 ... P0CX51 37595043
    797525 8evp:BR (2.38) BS01 rna ? GO:0000028 ... P02407 37595043
    797526 8evp:BS (2.38) BS01 rna ? GO:0000054 ... P0CX55 37595043
    797527 8evp:BT (2.38) BS01 rna ? GO:0000028 ... P07280 37595043
    797528 8evp:BU (2.38) BS01 rna ? GO:0003723 ... N/A 37595043
    797529 8evp:BV (2.38) BS01 rna ? GO:0000447 ... P0C0V8 37595043
    797530 8evp:BW (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    797531 8evp:BX (2.38) BS01 rna ? GO:0000462 ... P0CY39 37595043
    797532 8evp:BY (2.38) BS01 rna ? GO:0000462 ... P0CX31 37595043
    797533 8evp:BZ (2.38) BS01 rna ? N/A N/A 37595043
    797534 8evp:BZ (2.38) BS02 rna ? N/A N/A 37595043
    797535 8evp:Ba (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    797536 8evp:Bb (2.38) BS01 rna ? GO:0000028 ... P35997 37595043
    797537 8evp:Bc (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    797538 8evp:Bd (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    797539 8evp:Be (2.38) BS01 rna ? GO:0002181 ... P0CX33 37595043
    797540 8evp:Bf (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    797541 8evp:Bg (2.38) BS01 rna ? GO:0001965 ... P38011 37595043
    797542 8evp:E (2.38) BS01 rna ? GO:0003723 ... N/A 37595043
    797543 8evp:E (2.38) BS02 rna ? GO:0003723 ... N/A 37595043
    797544 8evq:AA (2.72) BS01 rna ? GO:0002181 ... P0CX45 37595043
    797545 8evq:AA (2.72) BS02 rna ? GO:0002181 ... P0CX45 37595043
    797546 8evq:AB (2.72) BS01 rna ? GO:0000027 ... P14126 37595043
    797547 8evq:AC (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    797548 8evq:AC (2.72) BS02 rna ? GO:0003735 ... N/A 37595043
    797549 8evq:AC (2.72) BS03 MG ? GO:0003735 ... N/A 37595043
    797550 8evq:AD (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    797551 8evq:AD (2.72) BS02 rna ? GO:0003735 ... N/A 37595043
    797552 8evq:AE (2.72) BS01 rna ? GO:0000027 ... Q02326 37595043
    797553 8evq:AF (2.72) BS01 rna ? GO:0000463 ... P05737 37595043
    797554 8evq:AF (2.72) BS02 rna ? GO:0000463 ... P05737 37595043
    797555 8evq:AG (2.72) BS01 rna ? GO:0000470 ... P17076 37595043
    797556 8evq:AG (2.72) BS02 rna ? GO:0000470 ... P17076 37595043
    797557 8evq:AH (2.72) BS01 rna ? GO:0002181 ... P05738 37595043
    797558 8evq:AI (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    797559 8evq:AI (2.72) BS02 rna ? GO:0003735 ... N/A 37595043
    797560 8evq:AJ (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    797561 8evq:AJ (2.72) BS02 rna ? GO:0003735 ... N/A 37595043
    797562 8evq:AL (2.72) BS01 rna ? GO:0002181 ... Q12690 37595043
    797563 8evq:AL (2.72) BS02 rna ? GO:0002181 ... Q12690 37595043
    797564 8evq:AM (2.72) BS01 rna ? GO:0000027 ... P36105 37595043
    797565 8evq:AN (2.72) BS01 rna ? GO:0002181 ... P05748 37595043
    797566 8evq:AN (2.72) BS02 rna ? GO:0002181 ... P05748 37595043
    797567 8evq:AN (2.72) BS03 MG ? GO:0002181 ... P05748 37595043
    797568 8evq:AO (2.72) BS01 rna ? GO:0000470 ... P26784 37595043
    797569 8evq:AP (2.72) BS01 rna ? GO:0000448 ... P05740 37595043
    797570 8evq:AP (2.72) BS02 rna ? GO:0000448 ... P05740 37595043
    797571 8evq:AQ (2.72) BS01 rna ? GO:0002181 ... P0CX49 37595043
    797572 8evq:AR (2.72) BS01 rna ? GO:0002181 ... P0CX82 37595043
    797573 8evq:AR (2.72) BS02 rna ? GO:0002181 ... P0CX82 37595043
    797574 8evq:AS (2.72) BS01 rna ? GO:0003735 ... B3LMD0 37595043
    797575 8evq:AS (2.72) BS02 rna ? GO:0003735 ... B3LMD0 37595043
    797576 8evq:AT (2.72) BS01 rna ? GO:0002181 ... Q02753 37595043
    797577 8evq:AT (2.72) BS02 rna ? GO:0002181 ... Q02753 37595043
    797578 8evq:AU (2.72) BS01 rna ? GO:0002181 ... P05749 37595043
    797579 8evq:AV (2.72) BS01 rna ? GO:0002181 ... P0CX41 37595043
    797580 8evq:AW (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    797581 8evq:AX (2.72) BS01 rna ? GO:0000027 ... P04456 37595043
    797582 8evq:AX (2.72) BS02 rna ? GO:0000027 ... P04456 37595043
    797583 8evq:AY (2.72) BS01 rna ? GO:0002181 ... P05743 37595043
    797584 8evq:AY (2.72) BS02 rna ? GO:0002181 ... P05743 37595043
    797585 8evq:AZ (2.72) BS01 rna ? GO:0002181 ... P0C2H6 37595043
    797586 8evq:Aa (2.72) BS01 rna ? GO:0002181 ... P02406 37595043
    797587 8evq:Ab (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    797588 8evq:Ac (2.72) BS01 rna ? GO:0002181 ... P14120 37595043
    797589 8evq:Ad (2.72) BS01 rna ? GO:0002181 ... P0C2H8 37595043
    797590 8evq:Ae (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    797591 8evq:Ae (2.72) BS02 MG ? GO:0003735 ... N/A 37595043
    797592 8evq:Af (2.72) BS01 rna ? GO:0000027 ... P05744 37595043
    797593 8evq:Ag (2.72) BS01 rna ? GO:0002181 ... P87262 37595043
    797594 8evq:Ah (2.72) BS01 rna ? GO:0000463 ... P0CX84 37595043
    797595 8evq:Ah (2.72) BS02 rna ? GO:0000463 ... P0CX84 37595043
    797596 8evq:Ah (2.72) BS03 MG ? GO:0000463 ... P0CX84 37595043
    797597 8evq:Ai (2.72) BS01 rna ? GO:0002181 ... P05745 37595043
    797598 8evq:Aj (2.72) BS01 rna ? GO:0000448 ... P49166 37595043
    797599 8evq:Aj (2.72) BS02 rna ? GO:0000448 ... P49166 37595043
    797600 8evq:Aj (2.72) BS03 MG ? GO:0000448 ... P49166 37595043

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).