SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    797601 8evq:Ak (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    797602 8evq:Al (2.72) BS01 rna ? GO:0002181 ... P04650 37595043
    797603 8evq:Al (2.72) BS02 rna ? GO:0002181 ... P04650 37595043
    797604 8evq:Am (2.72) BS01 rna ? GO:0000027 ... P0CH08 37595043
    797605 8evq:Ao (2.72) BS01 rna ? GO:0002181 ... P0CX27 37595043
    797606 8evq:Ao (2.72) BS02 ZN ? GO:0002181 ... P0CX27 37595043
    797607 8evq:Ap (2.72) BS01 rna ? GO:0002181 ... P0CX25 37595043
    797608 8evq:BA (2.72) BS01 rna ? GO:0000028 ... P32905 37595043
    797609 8evq:BB (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    797610 8evq:BC (2.72) BS01 rna ? GO:0003723 ... N/A 37595043
    797611 8evq:BD (2.72) BS01 rna ? GO:0003723 ... N/A 37595043
    797612 8evq:BE (2.72) BS01 rna ? GO:0002181 ... P0CX35 37595043
    797613 8evq:BF (2.72) BS01 rna ? GO:0003723 ... A0A1L4AA68 37595043
    797614 8evq:BF (2.72) BS02 rna ? GO:0003723 ... A0A1L4AA68 37595043
    797615 8evq:BG (2.72) BS01 rna ? GO:0000462 ... P0CX37 37595043
    797616 8evq:BH (2.72) BS01 rna ? GO:0002181 ... P26786 37595043
    797617 8evq:BI (2.72) BS01 rna ? GO:0000462 ... P0CX39 37595043
    797618 8evq:BI (2.72) BS02 rna ? GO:0000462 ... P0CX39 37595043
    797619 8evq:BJ (2.72) BS01 rna ? GO:0000462 ... O13516 37595043
    797620 8evq:BK (2.72) BS01 rna ? GO:0000054 ... Q08745 37595043
    797621 8evq:BL (2.72) BS01 rna ? GO:0000028 ... P0CX47 37595043
    797622 8evq:BM (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    797623 8evq:BN (2.72) BS01 rna ? GO:0000462 ... P05756 37595043
    797624 8evq:BO (2.72) BS01 rna ? GO:0000028 ... P06367 37595043
    797625 8evq:BO (2.72) BS02 rna ? GO:0000028 ... P06367 37595043
    797626 8evq:BP (2.72) BS01 rna ? GO:0003723 ... N/A 37595043
    797627 8evq:BQ (2.72) BS01 rna ? GO:0000462 ... P0CX51 37595043
    797628 8evq:BR (2.72) BS01 rna ? GO:0000028 ... P02407 37595043
    797629 8evq:BS (2.72) BS01 rna ? GO:0000054 ... P0CX55 37595043
    797630 8evq:BT (2.72) BS01 rna ? GO:0000028 ... P07280 37595043
    797631 8evq:BU (2.72) BS01 rna ? GO:0003723 ... N/A 37595043
    797632 8evq:BV (2.72) BS01 rna ? GO:0000447 ... P0C0V8 37595043
    797633 8evq:BW (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    797634 8evq:BX (2.72) BS01 rna ? GO:0000462 ... P0CX29 37595043
    797635 8evq:BY (2.72) BS01 rna ? GO:0000462 ... P0CX31 37595043
    797636 8evq:BZ (2.72) BS01 rna ? N/A N/A 37595043
    797637 8evq:BZ (2.72) BS02 rna ? N/A N/A 37595043
    797638 8evq:Ba (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    797639 8evq:Bb (2.72) BS01 rna ? GO:0000028 ... P35997 37595043
    797640 8evq:Bc (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    797641 8evq:Bd (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    797642 8evq:Be (2.72) BS01 rna ? GO:0002181 ... P0CX33 37595043
    797643 8evq:Bf (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    797644 8evq:Bg (2.72) BS01 rna ? GO:0001965 ... P38011 37595043
    797645 8evq:DC (2.72) BS01 rna 3.6.5.- GO:0003746 ... P32324 37595043
    797646 8evq:DC (2.72) BS02 rna 3.6.5.- GO:0003746 ... P32324 37595043
    797647 8evq:DC (2.72) BS03 rna 3.6.5.- GO:0003746 ... P32324 37595043
    797648 8evq:DC (2.72) BS04 GDP 3.6.5.- GO:0003746 ... P32324 37595043
    797649 8evq:DC (2.72) BS05 SO1 3.6.5.- GO:0003746 ... P32324 37595043
    797650 8evq:E (2.72) BS01 rna ? GO:0003723 ... N/A 37595043
    797651 8evq:E (2.72) BS02 rna ? GO:0003723 ... N/A 37595043
    797652 8evq:V (2.72) BS01 rna ? GO:0000027 ... P05317 37595043
    797653 8evr:AA (2.87) BS01 rna ? GO:0002181 ... P0CX45 37595043
    797654 8evr:AB (2.87) BS01 rna ? GO:0000027 ... P14126 37595043
    797655 8evr:AC (2.87) BS01 rna ? GO:0003735 ... N/A 37595043
    797656 8evr:AC (2.87) BS02 rna ? GO:0003735 ... N/A 37595043
    797657 8evr:AD (2.87) BS01 rna ? GO:0003735 ... N/A 37595043
    797658 8evr:AD (2.87) BS02 rna ? GO:0003735 ... N/A 37595043
    797659 8evr:AE (2.87) BS01 rna ? GO:0000027 ... Q02326 37595043
    797660 8evr:AF (2.87) BS01 rna ? GO:0000463 ... P05737 37595043
    797661 8evr:AF (2.87) BS02 rna ? GO:0000463 ... P05737 37595043
    797662 8evr:AG (2.87) BS01 rna ? GO:0000470 ... P17076 37595043
    797663 8evr:AG (2.87) BS02 rna ? GO:0000470 ... P17076 37595043
    797664 8evr:AH (2.87) BS01 rna ? GO:0002181 ... P05738 37595043
    797665 8evr:AI (2.87) BS01 rna ? GO:0003735 ... N/A 37595043
    797666 8evr:AI (2.87) BS02 rna ? GO:0003735 ... N/A 37595043
    797667 8evr:AJ (2.87) BS01 rna ? GO:0003735 ... N/A 37595043
    797668 8evr:AJ (2.87) BS02 rna ? GO:0003735 ... N/A 37595043
    797669 8evr:AL (2.87) BS01 rna ? GO:0002181 ... Q12690 37595043
    797670 8evr:AL (2.87) BS02 rna ? GO:0002181 ... Q12690 37595043
    797671 8evr:AM (2.87) BS01 rna ? GO:0000027 ... P36105 37595043
    797672 8evr:AN (2.87) BS01 rna ? GO:0002181 ... P05748 37595043
    797673 8evr:AN (2.87) BS02 rna ? GO:0002181 ... P05748 37595043
    797674 8evr:AN (2.87) BS03 MG ? GO:0002181 ... P05748 37595043
    797675 8evr:AO (2.87) BS01 rna ? GO:0000470 ... P26784 37595043
    797676 8evr:AO (2.87) BS02 MG ? GO:0000470 ... P26784 37595043
    797677 8evr:AP (2.87) BS01 rna ? GO:0000448 ... P05740 37595043
    797678 8evr:AP (2.87) BS02 rna ? GO:0000448 ... P05740 37595043
    797679 8evr:AQ (2.87) BS01 rna ? GO:0002181 ... P0CX49 37595043
    797680 8evr:AR (2.87) BS01 rna ? GO:0002181 ... P0CX82 37595043
    797681 8evr:AR (2.87) BS02 rna ? GO:0002181 ... P0CX82 37595043
    797682 8evr:AS (2.87) BS01 rna ? GO:0003735 ... B3LMD0 37595043
    797683 8evr:AS (2.87) BS02 rna ? GO:0003735 ... B3LMD0 37595043
    797684 8evr:AT (2.87) BS01 rna ? GO:0002181 ... Q02753 37595043
    797685 8evr:AT (2.87) BS02 rna ? GO:0002181 ... Q02753 37595043
    797686 8evr:AT (2.87) BS03 MG ? GO:0002181 ... Q02753 37595043
    797687 8evr:AU (2.87) BS01 rna ? GO:0002181 ... P05749 37595043
    797688 8evr:AV (2.87) BS01 rna ? GO:0002181 ... P0CX41 37595043
    797689 8evr:AW (2.87) BS01 rna ? GO:0003735 ... N/A 37595043
    797690 8evr:AX (2.87) BS01 rna ? GO:0000027 ... P04456 37595043
    797691 8evr:AX (2.87) BS02 rna ? GO:0000027 ... P04456 37595043
    797692 8evr:AY (2.87) BS01 rna ? GO:0002181 ... P05743 37595043
    797693 8evr:AY (2.87) BS02 rna ? GO:0002181 ... P05743 37595043
    797694 8evr:AZ (2.87) BS01 rna ? GO:0002181 ... P0C2H6 37595043
    797695 8evr:Aa (2.87) BS01 rna ? GO:0002181 ... P02406 37595043
    797696 8evr:Ab (2.87) BS01 rna ? GO:0003735 ... N/A 37595043
    797697 8evr:Ac (2.87) BS01 rna ? GO:0002181 ... P14120 37595043
    797698 8evr:Ad (2.87) BS01 rna ? GO:0002181 ... P0C2H8 37595043
    797699 8evr:Ae (2.87) BS01 rna ? GO:0003735 ... N/A 37595043
    797700 8evr:Af (2.87) BS01 rna ? GO:0000027 ... P05744 37595043
    797701 8evr:Ag (2.87) BS01 rna ? GO:0002181 ... P87262 37595043
    797702 8evr:Ah (2.87) BS01 rna ? GO:0000463 ... P0CX84 37595043
    797703 8evr:Ah (2.87) BS02 rna ? GO:0000463 ... P0CX84 37595043
    797704 8evr:Ai (2.87) BS01 rna ? GO:0002181 ... P05745 37595043
    797705 8evr:Aj (2.87) BS01 rna ? GO:0000448 ... P49166 37595043
    797706 8evr:Aj (2.87) BS02 rna ? GO:0000448 ... P49166 37595043
    797707 8evr:Ak (2.87) BS01 rna ? GO:0003735 ... N/A 37595043
    797708 8evr:Al (2.87) BS01 rna ? GO:0002181 ... P04650 37595043
    797709 8evr:Al (2.87) BS02 rna ? GO:0002181 ... P04650 37595043
    797710 8evr:Am (2.87) BS01 rna ? GO:0000027 ... P0CH08 37595043
    797711 8evr:Ao (2.87) BS01 rna ? GO:0002181 ... P0CX27 37595043
    797712 8evr:Ao (2.87) BS02 ZN ? GO:0002181 ... P0CX27 37595043
    797713 8evr:Ap (2.87) BS01 rna ? GO:0002181 ... P0CX25 37595043
    797714 8evr:BA (2.87) BS01 G ? GO:0000028 ... P32905 37595043
    797715 8evr:BA (2.87) BS02 A ? GO:0000028 ... P32905 37595043
    797716 8evr:BB (2.87) BS01 rna ? GO:0003735 ... N/A 37595043
    797717 8evr:BB (2.87) BS02 rna ? GO:0003735 ... N/A 37595043
    797718 8evr:BB (2.87) BS03 U ? GO:0003735 ... N/A 37595043
    797719 8evr:BC (2.87) BS01 rna ? GO:0003723 ... N/A 37595043
    797720 8evr:BC (2.87) BS02 U ? GO:0003723 ... N/A 37595043
    797721 8evr:BD (2.87) BS01 rna ? GO:0003723 ... N/A 37595043
    797722 8evr:BD (2.87) BS02 A ? GO:0003723 ... N/A 37595043
    797723 8evr:BD (2.87) BS03 U ? GO:0003723 ... N/A 37595043
    797724 8evr:BD (2.87) BS04 G ? GO:0003723 ... N/A 37595043
    797725 8evr:BD (2.87) BS05 G ? GO:0003723 ... N/A 37595043
    797726 8evr:BD (2.87) BS06 C ? GO:0003723 ... N/A 37595043
    797727 8evr:BD (2.87) BS07 G ? GO:0003723 ... N/A 37595043
    797728 8evr:BD (2.87) BS08 C ? GO:0003723 ... N/A 37595043
    797729 8evr:BD (2.87) BS09 U ? GO:0003723 ... N/A 37595043
    797730 8evr:BD (2.87) BS10 A ? GO:0003723 ... N/A 37595043
    797731 8evr:BE (2.87) BS01 rna ? GO:0002181 ... P0CX35 37595043
    797732 8evr:BF (2.87) BS01 rna ? GO:0003723 ... A0A1L4AA68 37595043
    797733 8evr:BF (2.87) BS02 rna ? GO:0003723 ... A0A1L4AA68 37595043
    797734 8evr:BF (2.87) BS03 A ? GO:0003723 ... A0A1L4AA68 37595043
    797735 8evr:BF (2.87) BS04 U ? GO:0003723 ... A0A1L4AA68 37595043
    797736 8evr:BF (2.87) BS05 C ? GO:0003723 ... A0A1L4AA68 37595043
    797737 8evr:BF (2.87) BS06 U ? GO:0003723 ... A0A1L4AA68 37595043
    797738 8evr:BF (2.87) BS07 U ? GO:0003723 ... A0A1L4AA68 37595043
    797739 8evr:BF (2.87) BS08 G ? GO:0003723 ... A0A1L4AA68 37595043
    797740 8evr:BF (2.87) BS09 U ? GO:0003723 ... A0A1L4AA68 37595043
    797741 8evr:BF (2.87) BS10 A ? GO:0003723 ... A0A1L4AA68 37595043
    797742 8evr:BF (2.87) BS11 U ? GO:0003723 ... A0A1L4AA68 37595043
    797743 8evr:BG (2.87) BS01 rna ? GO:0000462 ... P0CX37 37595043
    797744 8evr:BG (2.87) BS02 A ? GO:0000462 ... P0CX37 37595043
    797745 8evr:BG (2.87) BS03 U ? GO:0000462 ... P0CX37 37595043
    797746 8evr:BH (2.87) BS01 rna ? GO:0002181 ... P26786 37595043
    797747 8evr:BI (2.87) BS01 rna ? GO:0000462 ... P0CX39 37595043
    797748 8evr:BI (2.87) BS02 rna ? GO:0000462 ... P0CX39 37595043
    797749 8evr:BI (2.87) BS03 U ? GO:0000462 ... P0CX39 37595043
    797750 8evr:BI (2.87) BS04 A ? GO:0000462 ... P0CX39 37595043
    797751 8evr:BI (2.87) BS05 C ? GO:0000462 ... P0CX39 37595043
    797752 8evr:BJ (2.87) BS01 rna ? GO:0000462 ... O13516 37595043
    797753 8evr:BK (2.87) BS01 A ? GO:0000054 ... Q08745 37595043
    797754 8evr:BK (2.87) BS02 A ? GO:0000054 ... Q08745 37595043
    797755 8evr:BK (2.87) BS03 U ? GO:0000054 ... Q08745 37595043
    797756 8evr:BK (2.87) BS04 G ? GO:0000054 ... Q08745 37595043
    797757 8evr:BL (2.87) BS01 rna ? GO:0000028 ... P0CX47 37595043
    797758 8evr:BM (2.87) BS01 A ? GO:0003735 ... N/A 37595043
    797759 8evr:BM (2.87) BS02 G ? GO:0003735 ... N/A 37595043
    797760 8evr:BM (2.87) BS03 G ? GO:0003735 ... N/A 37595043
    797761 8evr:BM (2.87) BS04 G ? GO:0003735 ... N/A 37595043
    797762 8evr:BN (2.87) BS01 rna ? GO:0000462 ... P05756 37595043
    797763 8evr:BO (2.87) BS01 rna ? GO:0000028 ... P06367 37595043
    797764 8evr:BO (2.87) BS02 U ? GO:0000028 ... P06367 37595043
    797765 8evr:BO (2.87) BS03 C ? GO:0000028 ... P06367 37595043
    797766 8evr:BO (2.87) BS04 G ? GO:0000028 ... P06367 37595043
    797767 8evr:BO (2.87) BS05 U ? GO:0000028 ... P06367 37595043
    797768 8evr:BO (2.87) BS06 G ? GO:0000028 ... P06367 37595043
    797769 8evr:BP (2.87) BS01 rna ? GO:0003723 ... N/A 37595043
    797770 8evr:BP (2.87) BS02 A ? GO:0003723 ... N/A 37595043
    797771 8evr:BP (2.87) BS03 G ? GO:0003723 ... N/A 37595043
    797772 8evr:BP (2.87) BS04 G ? GO:0003723 ... N/A 37595043
    797773 8evr:BP (2.87) BS05 C ? GO:0003723 ... N/A 37595043
    797774 8evr:BP (2.87) BS06 U ? GO:0003723 ... N/A 37595043
    797775 8evr:BP (2.87) BS07 U ? GO:0003723 ... N/A 37595043
    797776 8evr:BP (2.87) BS08 G ? GO:0003723 ... N/A 37595043
    797777 8evr:BP (2.87) BS09 A ? GO:0003723 ... N/A 37595043
    797778 8evr:BP (2.87) BS10 A ? GO:0003723 ... N/A 37595043
    797779 8evr:BP (2.87) BS11 U ? GO:0003723 ... N/A 37595043
    797780 8evr:BP (2.87) BS12 U ? GO:0003723 ... N/A 37595043
    797781 8evr:BQ (2.87) BS01 rna ? GO:0000462 ... P0CX51 37595043
    797782 8evr:BQ (2.87) BS02 U ? GO:0000462 ... P0CX51 37595043
    797783 8evr:BQ (2.87) BS03 U ? GO:0000462 ... P0CX51 37595043
    797784 8evr:BQ (2.87) BS04 C ? GO:0000462 ... P0CX51 37595043
    797785 8evr:BQ (2.87) BS05 A ? GO:0000462 ... P0CX51 37595043
    797786 8evr:BQ (2.87) BS06 A ? GO:0000462 ... P0CX51 37595043
    797787 8evr:BQ (2.87) BS07 C ? GO:0000462 ... P0CX51 37595043
    797788 8evr:BQ (2.87) BS08 A ? GO:0000462 ... P0CX51 37595043
    797789 8evr:BQ (2.87) BS09 G ? GO:0000462 ... P0CX51 37595043
    797790 8evr:BQ (2.87) BS10 U ? GO:0000462 ... P0CX51 37595043
    797791 8evr:BQ (2.87) BS11 A ? GO:0000462 ... P0CX51 37595043
    797792 8evr:BQ (2.87) BS12 G ? GO:0000462 ... P0CX51 37595043
    797793 8evr:BQ (2.87) BS13 C ? GO:0000462 ... P0CX51 37595043
    797794 8evr:BQ (2.87) BS14 U ? GO:0000462 ... P0CX51 37595043
    797795 8evr:BQ (2.87) BS15 U ? GO:0000462 ... P0CX51 37595043
    797796 8evr:BQ (2.87) BS16 U ? GO:0000462 ... P0CX51 37595043
    797797 8evr:BQ (2.87) BS17 C ? GO:0000462 ... P0CX51 37595043
    797798 8evr:BQ (2.87) BS18 3AU ? GO:0000462 ... P0CX51 37595043
    797799 8evr:BQ (2.87) BS19 U ? GO:0000462 ... P0CX51 37595043
    797800 8evr:BR (2.87) BS01 G ? GO:0000028 ... P02407 37595043

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).