SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    797801 8evr:BR (2.87) BS02 G ? GO:0000028 ... P02407 37595043
    797802 8evr:BR (2.87) BS03 C ? GO:0000028 ... P02407 37595043
    797803 8evr:BR (2.87) BS04 U ? GO:0000028 ... P02407 37595043
    797804 8evr:BR (2.87) BS05 G ? GO:0000028 ... P02407 37595043
    797805 8evr:BR (2.87) BS06 U ? GO:0000028 ... P02407 37595043
    797806 8evr:BS (2.87) BS01 rna ? GO:0000054 ... P0CX55 37595043
    797807 8evr:BS (2.87) BS02 C ? GO:0000054 ... P0CX55 37595043
    797808 8evr:BS (2.87) BS03 G ? GO:0000054 ... P0CX55 37595043
    797809 8evr:BS (2.87) BS04 A ? GO:0000054 ... P0CX55 37595043
    797810 8evr:BS (2.87) BS05 G ? GO:0000054 ... P0CX55 37595043
    797811 8evr:BS (2.87) BS06 A ? GO:0000054 ... P0CX55 37595043
    797812 8evr:BS (2.87) BS07 G ? GO:0000054 ... P0CX55 37595043
    797813 8evr:BS (2.87) BS08 A ? GO:0000054 ... P0CX55 37595043
    797814 8evr:BS (2.87) BS09 C ? GO:0000054 ... P0CX55 37595043
    797815 8evr:BS (2.87) BS10 U ? GO:0000054 ... P0CX55 37595043
    797816 8evr:BS (2.87) BS11 U ? GO:0000054 ... P0CX55 37595043
    797817 8evr:BS (2.87) BS12 G ? GO:0000054 ... P0CX55 37595043
    797818 8evr:BT (2.87) BS01 A ? GO:0000028 ... P07280 37595043
    797819 8evr:BT (2.87) BS02 G ? GO:0000028 ... P07280 37595043
    797820 8evr:BT (2.87) BS03 C ? GO:0000028 ... P07280 37595043
    797821 8evr:BT (2.87) BS04 A ? GO:0000028 ... P07280 37595043
    797822 8evr:BT (2.87) BS05 C ? GO:0000028 ... P07280 37595043
    797823 8evr:BT (2.87) BS06 G ? GO:0000028 ... P07280 37595043
    797824 8evr:BT (2.87) BS07 G ? GO:0000028 ... P07280 37595043
    797825 8evr:BT (2.87) BS08 A ? GO:0000028 ... P07280 37595043
    797826 8evr:BT (2.87) BS09 G ? GO:0000028 ... P07280 37595043
    797827 8evr:BT (2.87) BS10 C ? GO:0000028 ... P07280 37595043
    797828 8evr:BT (2.87) BS11 G ? GO:0000028 ... P07280 37595043
    797829 8evr:BT (2.87) BS12 G ? GO:0000028 ... P07280 37595043
    797830 8evr:BT (2.87) BS13 C ? GO:0000028 ... P07280 37595043
    797831 8evr:BT (2.87) BS14 G ? GO:0000028 ... P07280 37595043
    797832 8evr:BT (2.87) BS15 G ? GO:0000028 ... P07280 37595043
    797833 8evr:BT (2.87) BS16 G ? GO:0000028 ... P07280 37595043
    797834 8evr:BT (2.87) BS17 G ? GO:0000028 ... P07280 37595043
    797835 8evr:BT (2.87) BS18 C ? GO:0000028 ... P07280 37595043
    797836 8evr:BT (2.87) BS19 G ? GO:0000028 ... P07280 37595043
    797837 8evr:BU (2.87) BS01 G ? GO:0003723 ... N/A 37595043
    797838 8evr:BU (2.87) BS02 A ? GO:0003723 ... N/A 37595043
    797839 8evr:BU (2.87) BS03 U ? GO:0003723 ... N/A 37595043
    797840 8evr:BU (2.87) BS04 U ? GO:0003723 ... N/A 37595043
    797841 8evr:BU (2.87) BS05 A ? GO:0003723 ... N/A 37595043
    797842 8evr:BU (2.87) BS06 G ? GO:0003723 ... N/A 37595043
    797843 8evr:BU (2.87) BS07 G ? GO:0003723 ... N/A 37595043
    797844 8evr:BU (2.87) BS08 G ? GO:0003723 ... N/A 37595043
    797845 8evr:BU (2.87) BS09 A ? GO:0003723 ... N/A 37595043
    797846 8evr:BU (2.87) BS10 U ? GO:0003723 ... N/A 37595043
    797847 8evr:BU (2.87) BS11 G ? GO:0003723 ... N/A 37595043
    797848 8evr:BU (2.87) BS12 4AC ? GO:0003723 ... N/A 37595043
    797849 8evr:BU (2.87) BS13 A ? GO:0003723 ... N/A 37595043
    797850 8evr:BU (2.87) BS14 C ? GO:0003723 ... N/A 37595043
    797851 8evr:BU (2.87) BS15 G ? GO:0003723 ... N/A 37595043
    797852 8evr:BV (2.87) BS01 rna ? GO:0000447 ... P0C0V8 37595043
    797853 8evr:BW (2.87) BS01 rna ? GO:0003735 ... N/A 37595043
    797854 8evr:BX (2.87) BS01 rna ? GO:0000462 ... P0CX29 37595043
    797855 8evr:BY (2.87) BS01 rna ? GO:0000462 ... P0CX31 37595043
    797856 8evr:BZ (2.87) BS01 rna ? N/A N/A 37595043
    797857 8evr:BZ (2.87) BS02 C ? N/A N/A 37595043
    797858 8evr:BZ (2.87) BS03 G ? N/A N/A 37595043
    797859 8evr:BZ (2.87) BS04 U ? N/A N/A 37595043
    797860 8evr:BZ (2.87) BS05 C ? N/A N/A 37595043
    797861 8evr:BZ (2.87) BS06 G ? N/A N/A 37595043
    797862 8evr:Ba (2.87) BS01 rna ? GO:0003735 ... N/A 37595043
    797863 8evr:Ba (2.87) BS02 A ? GO:0003735 ... N/A 37595043
    797864 8evr:Ba (2.87) BS03 G ? GO:0003735 ... N/A 37595043
    797865 8evr:Ba (2.87) BS04 A ? GO:0003735 ... N/A 37595043
    797866 8evr:Ba (2.87) BS05 U ? GO:0003735 ... N/A 37595043
    797867 8evr:Ba (2.87) BS06 C ? GO:0003735 ... N/A 37595043
    797868 8evr:Ba (2.87) BS07 A ? GO:0003735 ... N/A 37595043
    797869 8evr:Ba (2.87) BS08 U ? GO:0003735 ... N/A 37595043
    797870 8evr:Ba (2.87) BS09 A ? GO:0003735 ... N/A 37595043
    797871 8evr:Ba (2.87) BS10 G ? GO:0003735 ... N/A 37595043
    797872 8evr:Bb (2.87) BS01 rna ? GO:0000028 ... P35997 37595043
    797873 8evr:Bc (2.87) BS01 C ? GO:0003735 ... N/A 37595043
    797874 8evr:Bd (2.87) BS01 U ? GO:0003735 ... N/A 37595043
    797875 8evr:Bd (2.87) BS02 G ? GO:0003735 ... N/A 37595043
    797876 8evr:Bd (2.87) BS03 A ? GO:0003735 ... N/A 37595043
    797877 8evr:Bd (2.87) BS04 C ? GO:0003735 ... N/A 37595043
    797878 8evr:Bd (2.87) BS05 U ? GO:0003735 ... N/A 37595043
    797879 8evr:Bd (2.87) BS06 G ? GO:0003735 ... N/A 37595043
    797880 8evr:Bd (2.87) BS07 C ? GO:0003735 ... N/A 37595043
    797881 8evr:Bd (2.87) BS08 A ? GO:0003735 ... N/A 37595043
    797882 8evr:Bd (2.87) BS09 U ? GO:0003735 ... N/A 37595043
    797883 8evr:Bd (2.87) BS10 C ? GO:0003735 ... N/A 37595043
    797884 8evr:Bd (2.87) BS11 A ? GO:0003735 ... N/A 37595043
    797885 8evr:Be (2.87) BS01 rna ? GO:0002181 ... P0CX33 37595043
    797886 8evr:Bf (2.87) BS01 U ? GO:0003735 ... N/A 37595043
    797887 8evr:Bf (2.87) BS02 A ? GO:0003735 ... N/A 37595043
    797888 8evr:Bf (2.87) BS03 U ? GO:0003735 ... N/A 37595043
    797889 8evr:Bf (2.87) BS04 U ? GO:0003735 ... N/A 37595043
    797890 8evr:Bf (2.87) BS05 C ? GO:0003735 ... N/A 37595043
    797891 8evr:Bf (2.87) BS06 U ? GO:0003735 ... N/A 37595043
    797892 8evr:Bf (2.87) BS07 OMG ? GO:0003735 ... N/A 37595043
    797893 8evr:Bf (2.87) BS08 G ? GO:0003735 ... N/A 37595043
    797894 8evr:Bf (2.87) BS09 A ? GO:0003735 ... N/A 37595043
    797895 8evr:Bg (2.87) BS01 A ? GO:0001965 ... P38011 37595043
    797896 8evr:Bg (2.87) BS02 G ? GO:0001965 ... P38011 37595043
    797897 8evr:DC (2.87) BS01 rna 3.6.5.- GO:0003746 ... P32324 37595043
    797898 8evr:DC (2.87) BS02 rna 3.6.5.- GO:0003746 ... P32324 37595043
    797899 8evr:DC (2.87) BS03 rna 3.6.5.- GO:0003746 ... P32324 37595043
    797900 8evr:DC (2.87) BS04 GDP 3.6.5.- GO:0003746 ... P32324 37595043
    797901 8evr:DC (2.87) BS05 SO1 3.6.5.- GO:0003746 ... P32324 37595043
    797902 8evr:E (2.87) BS01 rna ? GO:0003723 ... N/A 37595043
    797903 8evr:E (2.87) BS02 rna ? GO:0003723 ... N/A 37595043
    797904 8evr:V (2.87) BS01 rna ? GO:0000027 ... P05317 37595043
    797905 8evs:AA (2.62) BS01 rna ? GO:0002181 ... P0CX45 37595043
    797906 8evs:AA (2.62) BS02 rna ? GO:0002181 ... P0CX45 37595043
    797907 8evs:AB (2.62) BS01 rna ? GO:0000027 ... P14126 37595043
    797908 8evs:AC (2.62) BS01 rna ? GO:0003735 ... N/A 37595043
    797909 8evs:AC (2.62) BS02 rna ? GO:0003735 ... N/A 37595043
    797910 8evs:AC (2.62) BS03 MG ? GO:0003735 ... N/A 37595043
    797911 8evs:AD (2.62) BS01 rna ? GO:0003735 ... N/A 37595043
    797912 8evs:AD (2.62) BS02 rna ? GO:0003735 ... N/A 37595043
    797913 8evs:AE (2.62) BS01 rna ? GO:0000027 ... Q02326 37595043
    797914 8evs:AF (2.62) BS01 rna ? GO:0000463 ... P05737 37595043
    797915 8evs:AF (2.62) BS02 rna ? GO:0000463 ... P05737 37595043
    797916 8evs:AG (2.62) BS01 rna ? GO:0000470 ... P17076 37595043
    797917 8evs:AG (2.62) BS02 rna ? GO:0000470 ... P17076 37595043
    797918 8evs:AH (2.62) BS01 rna ? GO:0002181 ... P05738 37595043
    797919 8evs:AI (2.62) BS01 rna ? GO:0003735 ... N/A 37595043
    797920 8evs:AI (2.62) BS02 rna ? GO:0003735 ... N/A 37595043
    797921 8evs:AJ (2.62) BS01 rna ? GO:0003735 ... N/A 37595043
    797922 8evs:AJ (2.62) BS02 rna ? GO:0003735 ... N/A 37595043
    797923 8evs:AL (2.62) BS01 rna ? GO:0002181 ... Q12690 37595043
    797924 8evs:AL (2.62) BS02 rna ? GO:0002181 ... Q12690 37595043
    797925 8evs:AM (2.62) BS01 rna ? GO:0000027 ... P36105 37595043
    797926 8evs:AN (2.62) BS01 rna ? GO:0002181 ... P05748 37595043
    797927 8evs:AN (2.62) BS02 rna ? GO:0002181 ... P05748 37595043
    797928 8evs:AN (2.62) BS03 MG ? GO:0002181 ... P05748 37595043
    797929 8evs:AO (2.62) BS01 rna ? GO:0000470 ... P26784 37595043
    797930 8evs:AP (2.62) BS01 rna ? GO:0000448 ... P05740 37595043
    797931 8evs:AP (2.62) BS02 rna ? GO:0000448 ... P05740 37595043
    797932 8evs:AQ (2.62) BS01 rna ? GO:0002181 ... P0CX49 37595043
    797933 8evs:AR (2.62) BS01 rna ? GO:0002181 ... P0CX82 37595043
    797934 8evs:AR (2.62) BS02 rna ? GO:0002181 ... P0CX82 37595043
    797935 8evs:AS (2.62) BS01 rna ? GO:0003735 ... B3LMD0 37595043
    797936 8evs:AS (2.62) BS02 rna ? GO:0003735 ... B3LMD0 37595043
    797937 8evs:AT (2.62) BS01 rna ? GO:0002181 ... Q02753 37595043
    797938 8evs:AT (2.62) BS02 rna ? GO:0002181 ... Q02753 37595043
    797939 8evs:AU (2.62) BS01 rna ? GO:0002181 ... P05749 37595043
    797940 8evs:AV (2.62) BS01 rna ? GO:0002181 ... P0CX41 37595043
    797941 8evs:AW (2.62) BS01 rna ? GO:0003735 ... N/A 37595043
    797942 8evs:AX (2.62) BS01 rna ? GO:0000027 ... P04456 37595043
    797943 8evs:AX (2.62) BS02 rna ? GO:0000027 ... P04456 37595043
    797944 8evs:AY (2.62) BS01 rna ? GO:0002181 ... P05743 37595043
    797945 8evs:AY (2.62) BS02 rna ? GO:0002181 ... P05743 37595043
    797946 8evs:AZ (2.62) BS01 rna ? GO:0002181 ... P0C2H6 37595043
    797947 8evs:Aa (2.62) BS01 rna ? GO:0002181 ... P02406 37595043
    797948 8evs:Ab (2.62) BS01 rna ? GO:0003735 ... N/A 37595043
    797949 8evs:Ac (2.62) BS01 rna ? GO:0002181 ... P14120 37595043
    797950 8evs:Ad (2.62) BS01 rna ? GO:0002181 ... P0C2H8 37595043
    797951 8evs:Ae (2.62) BS01 rna ? GO:0003735 ... N/A 37595043
    797952 8evs:Ae (2.62) BS02 MG ? GO:0003735 ... N/A 37595043
    797953 8evs:Ae (2.62) BS03 MG ? GO:0003735 ... N/A 37595043
    797954 8evs:Af (2.62) BS01 rna ? GO:0000027 ... P05744 37595043
    797955 8evs:Af (2.62) BS02 MG ? GO:0000027 ... P05744 37595043
    797956 8evs:Ag (2.62) BS01 rna ? GO:0002181 ... P87262 37595043
    797957 8evs:Ah (2.62) BS01 rna ? GO:0000463 ... P0CX84 37595043
    797958 8evs:Ah (2.62) BS02 rna ? GO:0000463 ... P0CX84 37595043
    797959 8evs:Ah (2.62) BS03 MG ? GO:0000463 ... P0CX84 37595043
    797960 8evs:Ai (2.62) BS01 rna ? GO:0002181 ... P05745 37595043
    797961 8evs:Aj (2.62) BS01 rna ? GO:0000448 ... P49166 37595043
    797962 8evs:Aj (2.62) BS02 rna ? GO:0000448 ... P49166 37595043
    797963 8evs:Aj (2.62) BS03 MG ? GO:0000448 ... P49166 37595043
    797964 8evs:Ak (2.62) BS01 rna ? GO:0003735 ... N/A 37595043
    797965 8evs:Al (2.62) BS01 rna ? GO:0002181 ... P04650 37595043
    797966 8evs:Al (2.62) BS02 rna ? GO:0002181 ... P04650 37595043
    797967 8evs:Am (2.62) BS01 rna ? GO:0000027 ... P0CH08 37595043
    797968 8evs:Ao (2.62) BS01 rna ? GO:0002181 ... P0CX27 37595043
    797969 8evs:Ao (2.62) BS02 ZN ? GO:0002181 ... P0CX27 37595043
    797970 8evs:Ap (2.62) BS01 rna ? GO:0002181 ... P0CX25 37595043
    797971 8evs:BA (2.62) BS01 A ? GO:0000028 ... P32905 37595043
    797972 8evs:BB (2.62) BS01 rna ? GO:0003735 ... N/A 37595043
    797973 8evs:BB (2.62) BS02 U ? GO:0003735 ... N/A 37595043
    797974 8evs:BC (2.62) BS01 rna ? GO:0003723 ... N/A 37595043
    797975 8evs:BC (2.62) BS02 U ? GO:0003723 ... N/A 37595043
    797976 8evs:BC (2.62) BS03 U ? GO:0003723 ... N/A 37595043
    797977 8evs:BD (2.62) BS01 U ? GO:0003723 ... N/A 37595043
    797978 8evs:BD (2.62) BS02 G ? GO:0003723 ... N/A 37595043
    797979 8evs:BD (2.62) BS03 G ? GO:0003723 ... N/A 37595043
    797980 8evs:BD (2.62) BS04 C ? GO:0003723 ... N/A 37595043
    797981 8evs:BD (2.62) BS05 A ? GO:0003723 ... N/A 37595043
    797982 8evs:BD (2.62) BS06 G ? GO:0003723 ... N/A 37595043
    797983 8evs:BD (2.62) BS07 C ? GO:0003723 ... N/A 37595043
    797984 8evs:BD (2.62) BS08 U ? GO:0003723 ... N/A 37595043
    797985 8evs:BD (2.62) BS09 U ? GO:0003723 ... N/A 37595043
    797986 8evs:BD (2.62) BS10 A ? GO:0003723 ... N/A 37595043
    797987 8evs:BE (2.62) BS01 rna ? GO:0002181 ... P0CX35 37595043
    797988 8evs:BF (2.62) BS01 rna ? GO:0003723 ... A0A1L4AA68 37595043
    797989 8evs:BF (2.62) BS02 rna ? GO:0003723 ... A0A1L4AA68 37595043
    797990 8evs:BF (2.62) BS03 A ? GO:0003723 ... A0A1L4AA68 37595043
    797991 8evs:BF (2.62) BS04 C ? GO:0003723 ... A0A1L4AA68 37595043
    797992 8evs:BF (2.62) BS05 U ? GO:0003723 ... A0A1L4AA68 37595043
    797993 8evs:BF (2.62) BS06 U ? GO:0003723 ... A0A1L4AA68 37595043
    797994 8evs:BF (2.62) BS07 U ? GO:0003723 ... A0A1L4AA68 37595043
    797995 8evs:BF (2.62) BS08 A ? GO:0003723 ... A0A1L4AA68 37595043
    797996 8evs:BF (2.62) BS09 G ? GO:0003723 ... A0A1L4AA68 37595043
    797997 8evs:BF (2.62) BS10 G ? GO:0003723 ... A0A1L4AA68 37595043
    797998 8evs:BF (2.62) BS11 A ? GO:0003723 ... A0A1L4AA68 37595043
    797999 8evs:BF (2.62) BS12 U ? GO:0003723 ... A0A1L4AA68 37595043
    798000 8evs:BF (2.62) BS13 A ? GO:0003723 ... A0A1L4AA68 37595043

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).