SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    798001 8eg5:G (2.14) BS01 UCI 3.4.22.59 GO:0004197 ... P55212 37104712
    798002 8eg5:H (2.14) BS01 UCI 3.4.22.59 GO:0004197 ... P55212 37104712
    798003 8eg6:A (1.82) BS01 US9 3.4.22.59 GO:0004197 ... P55212 37104712
    798004 8eg6:B (1.82) BS01 US9 3.4.22.59 GO:0004197 ... P55212 37104712
    798005 8eg6:C (1.82) BS01 US9 3.4.22.59 GO:0004197 ... P55212 37104712
    798006 8eg6:D (1.82) BS01 US9 3.4.22.59 GO:0004197 ... P55212 37104712
    798007 8eg6:E (1.82) BS01 US9 3.4.22.59 GO:0004197 ... P55212 37104712
    798008 8eg6:F (1.82) BS01 US9 3.4.22.59 GO:0004197 ... P55212 37104712
    798009 8eg6:G (1.82) BS01 US9 3.4.22.59 GO:0004197 ... P55212 37104712
    798010 8eg6:H (1.82) BS01 US9 3.4.22.59 GO:0004197 ... P55212 37104712
    798011 8eg7:I (3.2) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798012 8eg7:I (3.2) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798013 8eg7:I (3.2) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798014 8eg7:I (3.2) BS04 1N7 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798015 8eg7:I (3.2) BS05 1N7 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798016 8eg7:J (3.2) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798017 8eg7:J (3.2) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798018 8eg7:J (3.2) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798019 8eg7:J (3.2) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798020 8eg7:J (3.2) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798021 8eg8:I (3.3) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798022 8eg8:I (3.3) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798023 8eg8:I (3.3) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798024 8eg8:I (3.3) BS04 1N7 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798025 8eg8:I (3.3) BS05 1N7 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798026 8eg8:J (3.3) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798027 8eg8:J (3.3) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798028 8eg8:J (3.3) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798029 8eg8:J (3.3) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798030 8eg8:J (3.3) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798031 8egb:I (3.8) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798032 8egb:I (3.8) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798033 8egb:I (3.8) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798034 8egb:I (3.8) BS04 1N7 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798035 8egb:I (3.8) BS05 1N7 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798036 8egb:J (3.8) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798037 8egb:J (3.8) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798038 8egb:J (3.8) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798039 8egb:J (3.8) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798040 8egb:J (3.8) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798041 8egb:J (3.8) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798042 8egd:A (2.047) BS01 ADP 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 36717078
    798043 8egd:A (2.047) BS02 MG 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 36717078
    798044 8egd:A (2.047) BS03 WIH 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 36717078
    798045 8egd:A (2.047) BS04 WIH 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 36717078
    798046 8egd:A (2.047) BS05 WIH 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 36717078
    798047 8egf:A (1.85) BS01 ADP 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 36717078
    798048 8egf:A (1.85) BS02 WIK 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 36717078
    798049 8egf:A (1.85) BS03 WIK 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 36717078
    798050 8egi:A (2.3) BS01 HEM ? GO:0004601 ... P69905 36296435
    798051 8egi:A (2.3) BS02 VZN ? GO:0004601 ... P69905 36296435
    798052 8egi:A (2.3) BS03 VZN ? GO:0004601 ... P69905 36296435
    798053 8egi:B (2.3) BS01 HEM ? GO:0004601 ... P68871 36296435
    798054 8egi:C (2.3) BS01 VZN ? GO:0004601 ... P69905 36296435
    798055 8egi:C (2.3) BS02 HEM ? GO:0004601 ... P69905 36296435
    798056 8egi:C (2.3) BS03 VZN ? GO:0004601 ... P69905 36296435
    798057 8egi:D (2.3) BS01 HEM ? GO:0004601 ... P68871 36296435
    798058 8egk:B (1.98) BS01 AZI ? N/A A0ACD6B992 37100288
    798059 8egl:A (2.35) BS01 ADP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798060 8egl:A (2.35) BS02 5GP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798061 8egl:B (2.35) BS01 ADP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798062 8egl:B (2.35) BS02 5GP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798063 8egl:C (2.35) BS01 ADP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798064 8egl:C (2.35) BS02 5GP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798065 8egl:D (2.35) BS01 ADP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798066 8egl:D (2.35) BS02 5GP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798067 8egl:E (2.35) BS01 ADP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798068 8egl:E (2.35) BS02 5GP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798069 8egl:F (2.35) BS01 ADP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798070 8egl:F (2.35) BS02 5GP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798071 8egl:G (2.35) BS01 ADP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798072 8egl:G (2.35) BS02 5GP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798073 8egl:H (2.35) BS01 ADP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798074 8egl:H (2.35) BS02 5GP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798075 8egl:I (2.35) BS01 ADP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798076 8egl:I (2.35) BS02 5GP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798077 8egl:J (2.35) BS01 ADP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798078 8egl:J (2.35) BS02 5GP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798079 8egl:K (2.35) BS01 ADP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798080 8egl:K (2.35) BS02 5GP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798081 8egl:L (2.35) BS01 ADP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798082 8egl:L (2.35) BS02 5GP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    798083 8egm:A (2.2) BS01 WIU 6.3.2.8 GO:0005524 ... Q9HW02 N/A
    798084 8egm:B (2.2) BS01 WIU 6.3.2.8 GO:0005524 ... Q9HW02 N/A
    798085 8egm:C (2.2) BS01 WIU 6.3.2.8 GO:0005524 ... Q9HW02 N/A
    798086 8egm:D (2.2) BS01 WIU 6.3.2.8 GO:0005524 ... Q9HW02 N/A
    798087 8egm:E (2.2) BS01 WIU 6.3.2.8 GO:0005524 ... Q9HW02 N/A
    798088 8egm:F (2.2) BS01 WIU 6.3.2.8 GO:0005524 ... Q9HW02 N/A
    798089 8egm:G (2.2) BS01 WIU 6.3.2.8 GO:0005524 ... Q9HW02 N/A
    798090 8egm:H (2.2) BS01 WIU 6.3.2.8 GO:0005524 ... Q9HW02 N/A
    798091 8egn:A (1.95) BS01 WIR 6.3.2.8 GO:0005524 ... Q9HW02 N/A
    798092 8egn:B (1.95) BS01 WIR 6.3.2.8 GO:0005524 ... Q9HW02 N/A
    798093 8egq:A (1.955) BS01 ADP 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 36717078
    798094 8egq:A (1.955) BS02 WJK 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 36717078
    798095 8egq:A (1.955) BS03 WJK 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 36717078
    798096 8egr:G (3.58) BS01 peptide ? N/A A0A1S6L1H9 36449623
    798097 8egr:H (3.58) BS01 peptide ? N/A A0A1S6L1H9 36449623
    798098 8egr:H (3.58) BS02 peptide ? N/A A0A1S6L1H9 36449623
    798099 8egs:Y (3.92) BS01 peptide ? N/A A0A1S6L1I1 36449623
    798100 8egt:A (3.5) BS01 peptide ? N/A A0A1S6L1I0 36449623
    798101 8egu:A (1.923) BS01 ADP 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 36717078
    798102 8egu:A (1.923) BS02 U35 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 36717078
    798103 8egu:A (1.923) BS03 U35 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 36717078
    798104 8egv:A (2.09) BS01 WJF 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    798105 8egv:B (2.09) BS01 WJF 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    798106 8egw:A (2.3) BS01 CA ? GO:0005509 ... Q96JQ0 36797229
    798107 8egw:A (2.3) BS02 CA ? GO:0005509 ... Q96JQ0 36797229
    798108 8egw:A (2.3) BS03 CA ? GO:0005509 ... Q96JQ0 36797229
    798109 8egw:A (2.3) BS04 CA ? GO:0005509 ... Q96JQ0 36797229
    798110 8egw:A (2.3) BS05 CA ? GO:0005509 ... Q96JQ0 36797229
    798111 8egw:A (2.3) BS06 CA ? GO:0005509 ... Q96JQ0 36797229
    798112 8egw:B (2.3) BS01 CA ? GO:0005509 ... Q6V0I7 36797229
    798113 8egw:B (2.3) BS02 CA ? GO:0005509 ... Q6V0I7 36797229
    798114 8egw:B (2.3) BS03 CA ? GO:0005509 ... Q6V0I7 36797229
    798115 8egw:B (2.3) BS04 CA ? GO:0005509 ... Q6V0I7 36797229
    798116 8egw:B (2.3) BS05 CA ? GO:0005509 ... Q6V0I7 36797229
    798117 8egw:B (2.3) BS06 CA ? GO:0005509 ... Q6V0I7 36797229
    798118 8egw:B (2.3) BS07 CA ? GO:0005509 ... Q6V0I7 36797229
    798119 8egw:B (2.3) BS08 CA ? GO:0005509 ... Q6V0I7 36797229
    798120 8egw:B (2.3) BS09 CA ? GO:0005509 ... Q6V0I7 36797229
    798121 8egw:B (2.3) BS10 CA ? GO:0005509 ... Q6V0I7 36797229
    798122 8egx:A (3.688) BS01 CA ? GO:0005509 ... Q96JQ0 36797229
    798123 8egx:A (3.688) BS02 CA ? GO:0005509 ... Q96JQ0 36797229
    798124 8egx:A (3.688) BS03 CA ? GO:0005509 ... Q96JQ0 36797229
    798125 8egx:A (3.688) BS04 CA ? GO:0005509 ... Q96JQ0 36797229
    798126 8egx:A (3.688) BS05 CA ? GO:0005509 ... Q96JQ0 36797229
    798127 8egx:A (3.688) BS06 CA ? GO:0005509 ... Q96JQ0 36797229
    798128 8egx:A (3.688) BS07 CA ? GO:0005509 ... Q96JQ0 36797229
    798129 8egx:A (3.688) BS08 CA ? GO:0005509 ... Q96JQ0 36797229
    798130 8egx:A (3.688) BS09 CA ? GO:0005509 ... Q96JQ0 36797229
    798131 8egx:B (3.688) BS01 CA ? GO:0005509 ... Q6V0I7 36797229
    798132 8egx:B (3.688) BS02 CA ? GO:0005509 ... Q6V0I7 36797229
    798133 8egx:B (3.688) BS03 CA ? GO:0005509 ... Q6V0I7 36797229
    798134 8egx:B (3.688) BS04 CA ? GO:0005509 ... Q6V0I7 36797229
    798135 8egx:B (3.688) BS05 CA ? GO:0005509 ... Q6V0I7 36797229
    798136 8egx:B (3.688) BS06 CA ? GO:0005509 ... Q6V0I7 36797229
    798137 8egx:B (3.688) BS07 CA ? GO:0005509 ... Q6V0I7 36797229
    798138 8egx:B (3.688) BS08 CA ? GO:0005509 ... Q6V0I7 36797229
    798139 8egx:B (3.688) BS09 CA ? GO:0005509 ... Q6V0I7 36797229
    798140 8egy:A (2.05) BS01 PLP 4.2.1.20 GO:0000162 ... P50909 38744987
    798141 8egy:B (2.05) BS01 PLP 4.2.1.20 GO:0000162 ... P50909 38744987
    798142 8egz:A (1.9) BS01 0JO 4.2.1.20 GO:0000162 ... P50909 38744987
    798143 8egz:B (1.9) BS01 0JO 4.2.1.20 GO:0000162 ... P50909 38744987
    798144 8eh0:A (1.7) BS01 0JO 4.2.1.20 GO:0000162 ... P50909 38744987
    798145 8eh0:A (1.7) BS02 QOX 4.2.1.20 GO:0000162 ... P50909 38744987
    798146 8eh0:B (1.7) BS01 0JO 4.2.1.20 GO:0000162 ... P50909 38744987
    798147 8eh0:B (1.7) BS02 QOX 4.2.1.20 GO:0000162 ... P50909 38744987
    798148 8eh1:A (2.0) BS01 0JO 4.2.1.20 GO:0000162 ... P50909 38744987
    798149 8eh1:A (2.0) BS02 ES1 4.2.1.20 GO:0000162 ... P50909 38744987
    798150 8eh1:B (2.0) BS01 0JO 4.2.1.20 GO:0000162 ... P50909 38744987
    798151 8eh1:B (2.0) BS02 ES1 4.2.1.20 GO:0000162 ... P50909 38744987
    798152 8eh5:H (3.36) BS01 peptide N/A N/A N/A 37198165
    798153 8eh5:L (3.36) BS01 peptide N/A N/A N/A 37198165
    798154 8eh5:M (3.36) BS01 peptide N/A N/A N/A 37198165
    798155 8eh5:N (3.36) BS01 peptide N/A N/A N/A 37198165
    798156 8eh5:O (3.36) BS01 peptide N/A N/A N/A 37198165
    798157 8eh5:P (3.36) BS01 peptide N/A N/A N/A 37198165
    798158 8eh8:I (3.4) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798159 8eh8:I (3.4) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798160 8eh8:I (3.4) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798161 8eh8:I (3.4) BS04 1N7 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798162 8eh8:J (3.4) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798163 8eh8:J (3.4) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798164 8eh8:J (3.4) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798165 8eh8:J (3.4) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798166 8eh8:J (3.4) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798167 8eh8:J (3.4) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798168 8eh9:I (3.9) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798169 8eh9:I (3.9) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798170 8eh9:I (3.9) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798171 8eh9:I (3.9) BS04 1N7 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798172 8eh9:J (3.9) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798173 8eh9:J (3.9) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798174 8eh9:J (3.9) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798175 8eh9:J (3.9) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798176 8eh9:J (3.9) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798177 8eh9:J (3.9) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798178 8eha:I (3.7) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798179 8eha:I (3.7) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798180 8eha:I (3.7) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798181 8eha:I (3.7) BS04 1N7 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798182 8eha:J (3.7) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798183 8eha:J (3.7) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798184 8eha:J (3.7) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798185 8eha:J (3.7) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798186 8eha:J (3.7) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798187 8eha:J (3.7) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798188 8ehe:A (1.1) BS01 CA ? GO:0004252 ... A0A0A7KVG3 36755705
    798189 8ehe:A (1.1) BS02 CA ? GO:0004252 ... A0A0A7KVG3 36755705
    798190 8ehe:A (1.1) BS03 CA ? GO:0004252 ... A0A0A7KVG3 36755705
    798191 8ehe:A (1.1) BS04 CA ? GO:0004252 ... A0A0A7KVG3 36755705
    798192 8ehe:A (1.1) BS05 CA ? GO:0004252 ... A0A0A7KVG3 36755705
    798193 8ehe:A (1.1) BS06 CA ? GO:0004252 ... A0A0A7KVG3 36755705
    798194 8ehf:I (3.3) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798195 8ehf:I (3.3) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798196 8ehf:I (3.3) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798197 8ehf:I (3.3) BS04 4QM 2.7.7.6 GO:0000345 ... P0A8V2 36795753
    798198 8ehf:J (3.3) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798199 8ehf:J (3.3) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    798200 8ehf:J (3.3) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).