SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    798401 8eiu:P (2.24) BS01 rna ? GO:0000028 ... P0A7T3 36660825
    798402 8eiu:Q (2.24) BS01 rna ? GO:0000028 ... P0AG63 36660825
    798403 8eiu:R (2.24) BS01 rna ? GO:0002181 ... P0A7T7 36660825
    798404 8eiu:S (2.24) BS01 rna ? GO:0002181 ... P0A7U3 36660825
    798405 8eiu:T (2.24) BS01 rna ? GO:0000028 ... P0A7U7 36660825
    798406 8eiu:U (2.24) BS01 rna ? GO:0000028 ... P68679 36660825
    798407 8eiu:c (2.24) BS01 rna ? GO:0000027 ... P60422 36660825
    798408 8eiu:d (2.24) BS01 rna ? GO:0000027 ... P60438 36660825
    798409 8eiu:e (2.24) BS01 rna ? GO:0001070 ... P60723 36660825
    798410 8eiu:f (2.24) BS01 rna ? GO:0000027 ... P62399 36660825
    798411 8eiu:f (2.24) BS02 rna ? GO:0000027 ... P62399 36660825
    798412 8eiu:f (2.24) BS03 rna ? GO:0000027 ... P62399 36660825
    798413 8eiu:g (2.24) BS01 rna ? GO:0000027 ... P0AG55 36660825
    798414 8eiu:h (2.24) BS01 rna ? GO:0002181 ... P0A7R1 36660825
    798415 8eiu:i (2.24) BS01 rna ? GO:0002181 ... P0AA10 36660825
    798416 8eiu:j (2.24) BS01 rna ? GO:0002181 ... P0ADY3 36660825
    798417 8eiu:j (2.24) BS02 rna ? GO:0002181 ... P0ADY3 36660825
    798418 8eiu:k (2.24) BS01 rna ? GO:0002181 ... P02413 36660825
    798419 8eiu:l (2.24) BS01 rna ? GO:0000027 ... P0ADY7 36660825
    798420 8eiu:l (2.24) BS02 rna ? GO:0000027 ... P0ADY7 36660825
    798421 8eiu:l (2.24) BS03 rna ? GO:0000027 ... P0ADY7 36660825
    798422 8eiu:m (2.24) BS01 rna ? GO:0000027 ... P0AG44 36660825
    798423 8eiu:n (2.24) BS01 rna ? GO:0002181 ... P0C018 36660825
    798424 8eiu:n (2.24) BS02 rna ? GO:0002181 ... P0C018 36660825
    798425 8eiu:o (2.24) BS01 rna ? GO:0000027 ... P0A7K6 36660825
    798426 8eiu:o (2.24) BS02 rna ? GO:0000027 ... P0A7K6 36660825
    798427 8eiu:p (2.24) BS01 rna ? GO:0000027 ... P0A7L3 36660825
    798428 8eiu:q (2.24) BS01 rna ? GO:0002181 ... P0AG48 36660825
    798429 8eiu:r (2.24) BS01 rna ? GO:0002181 ... P61175 36660825
    798430 8eiu:s (2.24) BS01 rna ? GO:0000027 ... P0ADZ0 36660825
    798431 8eiu:t (2.24) BS01 rna ? GO:0000027 ... P60624 36660825
    798432 8eiu:u (2.24) BS01 rna ? GO:0000027 ... P68919 36660825
    798433 8eiu:u (2.24) BS02 rna ? GO:0000027 ... P68919 36660825
    798434 8eiu:v (2.24) BS01 rna ? GO:0000027 ... P0A7L8 36660825
    798435 8eiu:v (2.24) BS02 rna ? GO:0000027 ... P0A7L8 36660825
    798436 8eiu:w (2.24) BS01 rna ? GO:0000027 ... P0A7M2 36660825
    798437 8eiu:x (2.24) BS01 rna ? GO:0000027 ... P0A7M6 36660825
    798438 8eiu:y (2.24) BS01 rna ? GO:0000027 ... P0AG51 36660825
    798439 8eiu:y (2.24) BS02 rna ? GO:0000027 ... P0AG51 36660825
    798440 8eiu:z (2.24) BS01 rna ? GO:0000027 ... P0A7N4 36660825
    798441 8eiw:A (1.65) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    798442 8eiw:A (1.65) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    798443 8eiw:A (1.65) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 37563323
    798444 8eiw:A (1.65) BS04 CXF 1.1.1.1 GO:0004022 ... P00327 37563323
    798445 8eiw:B (1.65) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    798446 8eiw:B (1.65) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    798447 8eiw:B (1.65) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 37563323
    798448 8eiw:B (1.65) BS04 CXF 1.1.1.1 GO:0004022 ... P00327 37563323
    798449 8eix:A (2.46) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    798450 8eix:A (2.46) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    798451 8eix:A (2.46) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 37563323
    798452 8eix:A (2.46) BS04 CXF 1.1.1.1 GO:0004022 ... P00327 37563323
    798453 8eix:B (2.46) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    798454 8eix:B (2.46) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    798455 8eix:B (2.46) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 37563323
    798456 8eix:B (2.46) BS04 CXF 1.1.1.1 GO:0004022 ... P00327 37563323
    798457 8eiy:A (2.55) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    798458 8eiy:A (2.55) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    798459 8eiy:A (2.55) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 37563323
    798460 8eiy:B (2.55) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    798461 8eiy:B (2.55) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    798462 8eiy:B (2.55) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 37563323
    798463 8eiy:B (2.55) BS04 CXF 1.1.1.1 GO:0004022 ... P00327 37563323
    798464 8eiz:A (3.13) BS01 WK3 N/A GO:0004888 ... N/A 37045917
    798465 8eiz:B (3.13) BS01 WK3 N/A GO:0004888 ... N/A 37045917
    798466 8eiz:C (3.13) BS01 WK3 N/A GO:0004888 ... N/A 37045917
    798467 8eiz:D (3.13) BS01 WK3 N/A GO:0004888 ... N/A 37045917
    798468 8eiz:E (3.13) BS01 WK3 N/A GO:0004888 ... N/A 37045917
    798469 8ej0:A (2.59) BS01 FES ? GO:0016836 ... A0A4R3LQ44 36385513
    798470 8ej0:A (2.59) BS02 MG ? GO:0016836 ... A0A4R3LQ44 36385513
    798471 8ej0:A (2.59) BS03 BCT ? GO:0016836 ... A0A4R3LQ44 36385513
    798472 8ej0:A (2.59) BS04 BCT ? GO:0016836 ... A0A4R3LQ44 36385513
    798473 8ej0:C (2.59) BS01 FES ? GO:0016836 ... A0A4R3LQ44 36385513
    798474 8ej0:C (2.59) BS02 MG ? GO:0016836 ... A0A4R3LQ44 36385513
    798475 8ej0:C (2.59) BS03 BCT ? GO:0016836 ... A0A4R3LQ44 36385513
    798476 8ej0:E (2.59) BS01 FES ? GO:0016836 ... A0A4R3LQ44 36385513
    798477 8ej0:E (2.59) BS02 MG ? GO:0016836 ... A0A4R3LQ44 36385513
    798478 8ej0:E (2.59) BS03 BCT ? GO:0016836 ... A0A4R3LQ44 36385513
    798479 8ej0:G (2.59) BS01 FES ? GO:0016836 ... A0A4R3LQ44 36385513
    798480 8ej0:G (2.59) BS02 MG ? GO:0016836 ... A0A4R3LQ44 36385513
    798481 8ej3:C (3.13) BS01 dna 2.7.7.6 GO:0000345 ... P9WGY9 36745813
    798482 8ej3:C (3.13) BS02 rna 2.7.7.6 GO:0000345 ... P9WGY9 36745813
    798483 8ej3:C (3.13) BS03 dna 2.7.7.6 GO:0000345 ... P9WGY9 36745813
    798484 8ej3:C (3.13) BS04 G2P 2.7.7.6 GO:0000345 ... P9WGY9 36745813
    798485 8ej3:D (3.13) BS01 dna 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    798486 8ej3:D (3.13) BS02 rna 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    798487 8ej3:D (3.13) BS03 dna 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    798488 8ej3:D (3.13) BS04 MG 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    798489 8ej3:D (3.13) BS05 ZN 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    798490 8ej3:D (3.13) BS06 ZN 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    798491 8ej3:G (3.13) BS01 dna ? GO:0005829 ... Q06795 36745813
    798492 8ej3:G (3.13) BS02 dna ? GO:0005829 ... Q06795 36745813
    798493 8ej4:A (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    798494 8ej4:A (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    798495 8ej4:B (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    798496 8ej4:B (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    798497 8ej4:C (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    798498 8ej4:C (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    798499 8ej4:D (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    798500 8ej4:D (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    798501 8ej4:E (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    798502 8ej4:E (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    798503 8ej4:F (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    798504 8ej4:F (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    798505 8ej4:G (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    798506 8ej4:G (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    798507 8ej4:H (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    798508 8ej4:H (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    798509 8ej4:I (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    798510 8ej4:I (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    798511 8ej4:J (3.4) BS01 AGS 3.6.4.- N/A Q96P20 36442502
    798512 8ej4:J (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    798513 8ej6:F (1.39) BS01 dna ? GO:0003700 ... P17947 37352101
    798514 8ej6:F (1.39) BS02 dna ? GO:0003700 ... P17947 37352101
    798515 8ej8:F (1.45) BS01 dna ? GO:0003700 ... P17947 37352101
    798516 8ej8:F (1.45) BS02 dna ? GO:0003700 ... P17947 37352101
    798517 8ejb:A (1.58) BS01 WKC 2.7.10.2 GO:0004672 ... Q06187 36375120
    798518 8ejc:R (3.0) BS01 2YB ? GO:0003796 ... O14842 37216523
    798519 8ejd:a (3.8) BS01 MAN ? GO:0016829 ... P08669 37209096
    798520 8ejd:b (3.8) BS01 MAN ? GO:0016829 ... P08669 37209096
    798521 8ejd:c (3.8) BS01 MAN ? GO:0016829 ... P08669 37209096
    798522 8ejh:H (3.71) BS01 MAN N/A N/A N/A 37209096
    798523 8ejh:J (3.71) BS01 MAN N/A N/A N/A 37209096
    798524 8ejh:h (3.71) BS01 MAN N/A N/A N/A 37209096
    798525 8eji:A (3.81) BS01 MAN ? GO:0019031 ... P08669 37209096
    798526 8ejj:A (3.22) BS01 MAN ? GO:0019031 ... P08669 37209096
    798527 8ejj:B (3.22) BS01 MAN ? GO:0019031 ... P08669 37209096
    798528 8ejj:C (3.22) BS01 MAN ? GO:0019031 ... P08669 37209096
    798529 8ejk:R (3.4) BS01 2YB ? GO:0003796 ... O14842 37216523
    798530 8ejl:L (3.9) BS01 peptide ? GO:0016032 ... P12493 36759579
    798531 8ejl:L (3.9) BS02 peptide ? GO:0016032 ... P12493 36759579
    798532 8ejl:M (3.9) BS01 peptide ? GO:0016032 ... P12493 36759579
    798533 8ejm:A (1.8) BS01 ADP 3.6.4.13 GO:0003676 ... O43143 36459648
    798534 8ejn:A (1.481) BS01 HEM ? GO:0019825 ... Q9NAV8 37480762
    798535 8ejn:A (1.481) BS02 5JC ? GO:0019825 ... Q9NAV8 37480762
    798536 8ejn:B (1.481) BS01 HEM ? GO:0019825 ... Q9NAV8 37480762
    798537 8ejn:B (1.481) BS02 5JC ? GO:0019825 ... Q9NAV8 37480762
    798538 8ejo:A (2.67) BS01 dna ? GO:0003677 ... A0A6I8NF41 37744032
    798539 8ejo:A (2.67) BS02 dna ? GO:0003677 ... A0A6I8NF41 37744032
    798540 8ejo:B (2.67) BS01 dna ? GO:0003677 ... A0A6I8NF41 37744032
    798541 8ejo:B (2.67) BS02 dna ? GO:0003677 ... A0A6I8NF41 37744032
    798542 8ejp:A (2.174) BS01 dna ? GO:0003677 ... A0A6I8NF41 37744032
    798543 8ejp:A (2.174) BS02 dna ? GO:0003677 ... A0A6I8NF41 37744032
    798544 8ejp:B (2.174) BS01 dna ? GO:0003677 ... A0A6I8NF41 37744032
    798545 8ejp:B (2.174) BS02 dna ? GO:0003677 ... A0A6I8NF41 37744032
    798546 8ejr:B (2.08) BS01 peptide ? N/A Q14145 N/A
    798547 8ejs:B (2.82) BS01 peptide ? N/A Q14145 N/A
    798548 8eju:A (1.74) BS01 SEY ? GO:0000976 ... Q88N41 38696354
    798549 8eju:A (1.74) BS02 SEY ? GO:0000976 ... Q88N41 38696354
    798550 8eju:B (1.74) BS01 SEY ? GO:0000976 ... Q88N41 38696354
    798551 8eju:B (1.74) BS02 SEY ? GO:0000976 ... Q88N41 38696354
    798552 8eju:B (1.74) BS03 SEY ? GO:0000976 ... Q88N41 38696354
    798553 8ejx:A (1.65) BS01 9JT 5.2.1.8 GO:0000413 ... P30405 38146639
    798554 8ek1:A (3.6) BS01 peptide N/A N/A N/A 36931276
    798555 8ek1:B (3.6) BS01 peptide N/A N/A N/A 36931276
    798556 8ek1:D (3.6) BS01 peptide N/A N/A N/A 36931276
    798557 8ek1:L (3.6) BS01 peptide N/A N/A N/A 36931276
    798558 8ek3:F (1.38) BS01 dna ? GO:0003700 ... P17947 37352101
    798559 8ek3:F (1.38) BS02 dna ? GO:0003700 ... P17947 37352101
    798560 8ek5:A (2.11) BS01 peptide ? N/A F6IR24 38039376
    798561 8ek5:E (2.11) BS01 peptide N/A N/A N/A 38039376
    798562 8ek7:C (1.65) BS01 MG N/A GO:0004590 ... N/A N/A
    798563 8ek7:E (1.65) BS01 MG N/A GO:0004590 ... N/A N/A
    798564 8ek8:E (2.63) BS01 dna ? GO:0003700 ... P17947 37352101
    798565 8ek8:E (2.63) BS02 dna ? GO:0003700 ... P17947 37352101
    798566 8ek8:F (2.63) BS01 dna ? GO:0003700 ... P17947 37352101
    798567 8ek8:F (2.63) BS02 dna ? GO:0003700 ... P17947 37352101
    798568 8ek9:A (1.4) BS01 NXL 3.5.2.6 GO:0008800 ... A0A1W0D7S2 37272821
    798569 8eka:A (3.7) BS01 peptide N/A N/A N/A 36931276
    798570 8eka:B (3.7) BS01 peptide N/A N/A N/A 36931276
    798571 8eka:C (3.7) BS01 peptide N/A N/A N/A 36931276
    798572 8eka:D (3.7) BS01 peptide N/A N/A N/A 36931276
    798573 8eka:L (3.7) BS01 peptide N/A N/A N/A 36931276
    798574 8ekb:10 (2.7) BS01 rna ? GO:0003735 ... P60493 36546783
    798575 8ekb:10 (2.7) BS02 rna ? GO:0003735 ... P60493 36546783
    798576 8ekb:10 (2.7) BS03 MG ? GO:0003735 ... P60493 36546783
    798577 8ekb:10 (2.7) BS04 MG ? GO:0003735 ... P60493 36546783
    798578 8ekb:10 (2.7) BS05 MG ? GO:0003735 ... P60493 36546783
    798579 8ekb:11 (2.7) BS01 rna ? GO:0003735 ... P60494 36546783
    798580 8ekb:11 (2.7) BS02 MG ? GO:0003735 ... P60494 36546783
    798581 8ekb:12 (2.7) BS01 rna ? GO:0003735 ... Q5SHP6 36546783
    798582 8ekb:12 (2.7) BS02 MG ? GO:0003735 ... Q5SHP6 36546783
    798583 8ekb:13 (2.7) BS01 rna ? GO:0003735 ... Q5SHQ6 36546783
    798584 8ekb:13 (2.7) BS02 rna ? GO:0003735 ... Q5SHQ6 36546783
    798585 8ekb:13 (2.7) BS03 MG ? GO:0003735 ... Q5SHQ6 36546783
    798586 8ekb:14 (2.7) BS01 rna ? GO:0003735 ... Q5SJE1 36546783
    798587 8ekb:14 (2.7) BS02 ZN ? GO:0003735 ... Q5SJE1 36546783
    798588 8ekb:15 (2.7) BS01 rna ? GO:0003735 ... P80339 36546783
    798589 8ekb:15 (2.7) BS02 ZN ? GO:0003735 ... P80339 36546783
    798590 8ekb:16 (2.7) BS01 rna ? GO:0003735 ... P35871 36546783
    798591 8ekb:16 (2.7) BS02 MG ? GO:0003735 ... P35871 36546783
    798592 8ekb:16 (2.7) BS03 ZN ? GO:0003735 ... P35871 36546783
    798593 8ekb:17 (2.7) BS01 rna ? GO:0003735 ... P80340 36546783
    798594 8ekb:17 (2.7) BS02 MG ? GO:0003735 ... P80340 36546783
    798595 8ekb:17 (2.7) BS03 MG ? GO:0003735 ... P80340 36546783
    798596 8ekb:17 (2.7) BS04 MG ? GO:0003735 ... P80340 36546783
    798597 8ekb:18 (2.7) BS01 rna ? GO:0003735 ... Q5SKU1 36546783
    798598 8ekb:18 (2.7) BS02 MG ? GO:0003735 ... Q5SKU1 36546783
    798599 8ekb:18 (2.7) BS03 MG ? GO:0003735 ... Q5SKU1 36546783
    798600 8ekb:18 (2.7) BS04 MG ? GO:0003735 ... Q5SKU1 36546783

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).