SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    799401 8em7:B (2.97) BS13 CA ? GO:0005509 ... A2ARV4 36750096
    799402 8em7:B (2.97) BS14 CA ? GO:0005509 ... A2ARV4 36750096
    799403 8em7:B (2.97) BS15 CA ? GO:0005509 ... A2ARV4 36750096
    799404 8em7:B (2.97) BS16 CA ? GO:0005509 ... A2ARV4 36750096
    799405 8em7:B (2.97) BS17 CA ? GO:0005509 ... A2ARV4 36750096
    799406 8em7:B (2.97) BS18 CA ? GO:0005509 ... A2ARV4 36750096
    799407 8em7:B (2.97) BS19 CA ? GO:0005509 ... A2ARV4 36750096
    799408 8em7:B (2.97) BS20 CA ? GO:0005509 ... A2ARV4 36750096
    799409 8em7:B (2.97) BS21 CA ? GO:0005509 ... A2ARV4 36750096
    799410 8em7:B (2.97) BS22 CA ? GO:0005509 ... A2ARV4 36750096
    799411 8em7:B (2.97) BS23 CA ? GO:0005509 ... A2ARV4 36750096
    799412 8em7:B (2.97) BS24 CA ? GO:0005509 ... A2ARV4 36750096
    799413 8em7:B (2.97) BS25 CA ? GO:0005509 ... A2ARV4 36750096
    799414 8em7:B (2.97) BS26 CA ? GO:0005509 ... A2ARV4 36750096
    799415 8em7:B (2.97) BS27 CA ? GO:0005509 ... A2ARV4 36750096
    799416 8em7:B (2.97) BS28 CA ? GO:0005509 ... A2ARV4 36750096
    799417 8em7:B (2.97) BS29 CA ? GO:0005509 ... A2ARV4 36750096
    799418 8em7:B (2.97) BS30 CA ? GO:0005509 ... A2ARV4 36750096
    799419 8em7:B (2.97) BS31 CA ? GO:0005509 ... A2ARV4 36750096
    799420 8em7:B (2.97) BS32 CA ? GO:0005509 ... A2ARV4 36750096
    799421 8em7:B (2.97) BS33 CA ? GO:0005509 ... A2ARV4 36750096
    799422 8em7:B (2.97) BS34 CA ? GO:0005509 ... A2ARV4 36750096
    799423 8em7:B (2.97) BS35 CA ? GO:0005509 ... A2ARV4 36750096
    799424 8em7:B (2.97) BS36 CA ? GO:0005509 ... A2ARV4 36750096
    799425 8em7:B (2.97) BS37 CA ? GO:0005509 ... A2ARV4 36750096
    799426 8em7:B (2.97) BS38 CA ? GO:0005509 ... A2ARV4 36750096
    799427 8em7:B (2.97) BS39 CA ? GO:0005509 ... A2ARV4 36750096
    799428 8em7:B (2.97) BS40 CA ? GO:0005509 ... A2ARV4 36750096
    799429 8em7:B (2.97) BS41 CA ? GO:0005509 ... A2ARV4 36750096
    799430 8em7:B (2.97) BS42 CA ? GO:0005509 ... A2ARV4 36750096
    799431 8em7:B (2.97) BS43 CA ? GO:0005509 ... A2ARV4 36750096
    799432 8em7:B (2.97) BS44 CA ? GO:0005509 ... A2ARV4 36750096
    799433 8em8:A (2.54) BS01 WLK 2.7.11.12 GO:0004672 ... Q8I719 38372781
    799434 8em9:F (2.341) BS01 dna ? GO:0003700 ... P17947 37352101
    799435 8em9:F (2.341) BS02 dna ? GO:0003700 ... P17947 37352101
    799436 8emd:F (1.55) BS01 dna ? GO:0003700 ... P17947 37352101
    799437 8emd:F (1.55) BS02 dna ? GO:0003700 ... P17947 37352101
    799438 8eme:B (3.32) BS01 ZNL 2.7.10.1 GO:0004672 ... P00533 38947214
    799439 8emf:A (1.80482) BS01 peptide ? N/A F4NBT2 39919196
    799440 8emg:A (1.83001) BS01 peptide ? N/A F4NBT2 N/A
    799441 8emh:A (3.63) BS01 dna ? GO:0004176 ... A0ACD6BAE6 36794719
    799442 8emh:B (3.63) BS01 dna ? GO:0004176 ... A0ACD6BAE6 36794719
    799443 8emh:C (3.63) BS01 dna ? GO:0004176 ... A0ACD6BAE6 36794719
    799444 8emh:F (3.63) BS01 dna ? GO:0004176 ... A0ACD6BAE6 36794719
    799445 8emh:F (3.63) BS02 dna ? GO:0004176 ... A0ACD6BAE6 36794719
    799446 8emh:H (3.63) BS01 dna ? GO:0004176 ... A0ACD6BAE6 36794719
    799447 8emh:I (3.63) BS01 dna ? GO:0004176 ... A0ACD6BAE6 36794719
    799448 8emh:J (3.63) BS01 dna ? GO:0004176 ... A0ACD6BAE6 36794719
    799449 8emh:K (3.63) BS01 dna ? GO:0004176 ... A0ACD6BAE6 36794719
    799450 8emi:A (1.57302) BS01 peptide ? N/A F4NBT2 N/A
    799451 8emj:A (1.75003) BS01 peptide ? N/A F4NBT2 N/A
    799452 8emk:A (1.66523) BS01 peptide ? N/A F4NBT2 N/A
    799453 8eml:A (2.21) BS01 dna ? GO:0000981 ... P31316 38874471
    799454 8eml:A (2.21) BS02 dna ? GO:0000981 ... P31316 38874471
    799455 8eml:A (2.21) BS03 dna ? GO:0000981 ... P31316 38874471
    799456 8eml:B (2.21) BS01 dna ? GO:0000981 ... P31316 38874471
    799457 8eml:B (2.21) BS02 dna ? GO:0000981 ... P31316 38874471
    799458 8eml:B (2.21) BS03 dna ? GO:0000981 ... P31316 38874471
    799459 8emm:0 (2.1) BS01 rna ? GO:0000027 ... P0A7N9 37308707
    799460 8emm:1 (2.1) BS01 rna ? GO:0002181 ... P0A7P5 37308707
    799461 8emm:2 (2.1) BS01 rna ? GO:0002181 ... P0A7Q1 37308707
    799462 8emm:3 (2.1) BS01 rna ? GO:0002181 ... P0A7Q6 37308707
    799463 8emm:3 (2.1) BS02 ZN ? GO:0002181 ... P0A7Q6 37308707
    799464 8emm:4 (2.1) BS01 rna ? GO:0002181 ... P0A7M9 37308707
    799465 8emm:4 (2.1) BS02 rna ? GO:0002181 ... P0A7M9 37308707
    799466 8emm:4 (2.1) BS03 ZN ? GO:0002181 ... P0A7M9 37308707
    799467 8emm:B (2.1) BS01 rna ? GO:0000028 ... P0A7V0 37308707
    799468 8emm:C (2.1) BS01 rna ? GO:0000028 ... P0A7V3 37308707
    799469 8emm:C (2.1) BS02 rna ? GO:0000028 ... P0A7V3 37308707
    799470 8emm:D (2.1) BS01 rna ? GO:0000028 ... P0A7V8 37308707
    799471 8emm:E (2.1) BS01 rna ? GO:0000028 ... P0A7W1 37308707
    799472 8emm:E (2.1) BS02 rna ? GO:0000028 ... P0A7W1 37308707
    799473 8emm:F (2.1) BS01 rna ? GO:0002181 ... P02358 37308707
    799474 8emm:G (2.1) BS01 rna ? GO:0000028 ... P02359 37308707
    799475 8emm:G (2.1) BS02 rna ? GO:0000028 ... P02359 37308707
    799476 8emm:H (2.1) BS01 rna ? GO:0000028 ... P0A7W7 37308707
    799477 8emm:I (2.1) BS01 rna ? GO:0002181 ... P0A7X3 37308707
    799478 8emm:I (2.1) BS02 rna ? GO:0002181 ... P0A7X3 37308707
    799479 8emm:J (2.1) BS01 rna ? GO:0000049 ... P0A7R5 37308707
    799480 8emm:K (2.1) BS01 rna ? GO:0002181 ... P0A7R9 37308707
    799481 8emm:L (2.1) BS01 rna ? GO:0000049 ... P0A7S3 37308707
    799482 8emm:L (2.1) BS02 rna ? GO:0000049 ... P0A7S3 37308707
    799483 8emm:M (2.1) BS01 rna ? GO:0000049 ... P0A7S9 37308707
    799484 8emm:M (2.1) BS02 rna ? GO:0000049 ... P0A7S9 37308707
    799485 8emm:N (2.1) BS01 rna ? GO:0000028 ... P0AG59 37308707
    799486 8emm:O (2.1) BS01 rna ? GO:0000028 ... P0ADZ4 37308707
    799487 8emm:O (2.1) BS02 rna ? GO:0000028 ... P0ADZ4 37308707
    799488 8emm:P (2.1) BS01 rna ? GO:0000028 ... P0A7T3 37308707
    799489 8emm:Q (2.1) BS01 rna ? GO:0000028 ... P0AG63 37308707
    799490 8emm:R (2.1) BS01 rna ? GO:0002181 ... P0A7T7 37308707
    799491 8emm:S (2.1) BS01 rna ? GO:0002181 ... P0A7U3 37308707
    799492 8emm:T (2.1) BS01 rna ? GO:0000028 ... P0A7U7 37308707
    799493 8emm:U (2.1) BS01 rna ? GO:0000028 ... P68679 37308707
    799494 8emm:c (2.1) BS01 rna ? GO:0000027 ... P60422 37308707
    799495 8emm:c (2.1) BS02 rna ? GO:0000027 ... P60422 37308707
    799496 8emm:d (2.1) BS01 rna ? GO:0000027 ... P60438 37308707
    799497 8emm:e (2.1) BS01 rna ? GO:0001070 ... P60723 37308707
    799498 8emm:f (2.1) BS01 rna ? GO:0000027 ... P62399 37308707
    799499 8emm:f (2.1) BS02 rna ? GO:0000027 ... P62399 37308707
    799500 8emm:f (2.1) BS03 rna ? GO:0000027 ... P62399 37308707
    799501 8emm:g (2.1) BS01 rna ? GO:0000027 ... P0AG55 37308707
    799502 8emm:h (2.1) BS01 rna ? GO:0002181 ... P0A7R1 37308707
    799503 8emm:i (2.1) BS01 rna ? GO:0002181 ... P0AA10 37308707
    799504 8emm:j (2.1) BS01 rna ? GO:0002181 ... P0ADY3 37308707
    799505 8emm:j (2.1) BS02 rna ? GO:0002181 ... P0ADY3 37308707
    799506 8emm:k (2.1) BS01 rna ? GO:0002181 ... P02413 37308707
    799507 8emm:l (2.1) BS01 rna ? GO:0000027 ... P0ADY7 37308707
    799508 8emm:l (2.1) BS02 rna ? GO:0000027 ... P0ADY7 37308707
    799509 8emm:l (2.1) BS03 rna ? GO:0000027 ... P0ADY7 37308707
    799510 8emm:m (2.1) BS01 rna ? GO:0000027 ... P0AG44 37308707
    799511 8emm:n (2.1) BS01 rna ? GO:0002181 ... P0C018 37308707
    799512 8emm:n (2.1) BS02 rna ? GO:0002181 ... P0C018 37308707
    799513 8emm:o (2.1) BS01 rna ? GO:0000027 ... P0A7K6 37308707
    799514 8emm:o (2.1) BS02 rna ? GO:0000027 ... P0A7K6 37308707
    799515 8emm:p (2.1) BS01 rna ? GO:0000027 ... P0A7L3 37308707
    799516 8emm:q (2.1) BS01 rna ? GO:0002181 ... P0AG48 37308707
    799517 8emm:r (2.1) BS01 rna ? GO:0002181 ... P61175 37308707
    799518 8emm:s (2.1) BS01 rna ? GO:0000027 ... P0ADZ0 37308707
    799519 8emm:t (2.1) BS01 rna ? GO:0000027 ... P60624 37308707
    799520 8emm:u (2.1) BS01 rna ? GO:0000027 ... P68919 37308707
    799521 8emm:v (2.1) BS01 rna ? GO:0000027 ... P0A7L8 37308707
    799522 8emm:v (2.1) BS02 rna ? GO:0000027 ... P0A7L8 37308707
    799523 8emm:w (2.1) BS01 rna ? GO:0000027 ... P0A7M2 37308707
    799524 8emm:x (2.1) BS01 rna ? GO:0000027 ... P0A7M6 37308707
    799525 8emm:y (2.1) BS01 rna ? GO:0000027 ... P0AG51 37308707
    799526 8emm:z (2.1) BS01 rna ? GO:0000027 ... P0A7N4 37308707
    799527 8emq:A (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799528 8emq:B (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799529 8emq:C (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799530 8emq:D (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799531 8emq:E (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799532 8emq:F (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799533 8emq:G (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799534 8emq:H (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799535 8emq:I (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799536 8emq:J (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799537 8emq:K (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799538 8emq:L (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799539 8emq:M (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799540 8emq:N (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799541 8emq:O (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799542 8emq:P (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799543 8emq:Q (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799544 8emq:R (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799545 8emq:S (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799546 8emq:T (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799547 8emq:U (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799548 8emq:V (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799549 8emq:W (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799550 8emq:X (1.66) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 36578473
    799551 8emr:B (2.92) BS01 CA ? GO:0005509 ... P14314 37289586
    799552 8emr:B (2.92) BS02 CA ? GO:0005509 ... P14314 37289586
    799553 8ems:A (2.65) BS01 PLP 2.4.1.1 GO:0002060 ... P06737 37289586
    799554 8ems:B (2.65) BS01 PLP 2.4.1.1 GO:0002060 ... P06737 37289586
    799555 8emt:A (2.92) BS01 FES 1.17.3.-
    1.2.3.1
    GO:0004031 ... Q06278 37289586
    799556 8emt:A (2.92) BS02 FES 1.17.3.-
    1.2.3.1
    GO:0004031 ... Q06278 37289586
    799557 8emt:A (2.92) BS03 FAD 1.17.3.-
    1.2.3.1
    GO:0004031 ... Q06278 37289586
    799558 8emt:B (2.92) BS01 FES 1.17.3.-
    1.2.3.1
    GO:0004031 ... Q06278 37289586
    799559 8emt:B (2.92) BS02 FES 1.17.3.-
    1.2.3.1
    GO:0004031 ... Q06278 37289586
    799560 8emt:B (2.92) BS03 FAD 1.17.3.-
    1.2.3.1
    GO:0004031 ... Q06278 37289586
    799561 8emu:A (1.13) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36735827
    799562 8emu:A (1.13) BS02 WMO 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36735827
    799563 8emu:A (1.13) BS03 WMO 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36735827
    799564 8emv:A (3.6) BS01 CA 3.1.4.11 GO:0003073 ... Q01970 37172014
    799565 8emw:A (3.5) BS01 CA 3.1.4.11 GO:0003073 ... Q01970 37172014
    799566 8emx:A (3.3) BS01 CA 3.1.4.11 GO:0003073 ... Q01970 37172014
    799567 8en8:A (2.70001) BS01 peptide ? N/A F4NBT2 N/A
    799568 8en8:E (2.70001) BS01 peptide N/A N/A N/A N/A
    799569 8en8:F (2.70001) BS01 peptide ? N/A F4NBT2 N/A
    799570 8en8:J (2.70001) BS01 peptide N/A N/A N/A N/A
    799571 8enc:B (3.6) BS01 ADP ? GO:0005200 ... B6VNT8 36459134
    799572 8enc:C (3.6) BS01 ADP ? GO:0005200 ... B6VNT8 36459134
    799573 8enc:D (3.6) BS01 ADP ? GO:0005200 ... B6VNT8 36459134
    799574 8enc:E (3.6) BS01 ADP ? GO:0005200 ... B6VNT8 36459134
    799575 8enc:F (3.6) BS01 ADP ? GO:0005200 ... B6VNT8 36459134
    799576 8ene:A (2.64) BS01 NAD 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36
    GO:0001523 ... P00352 37289586
    799577 8ene:B (2.64) BS01 NAD 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36
    GO:0001523 ... P00352 37289586
    799578 8ene:C (2.64) BS01 NAD 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36
    GO:0001523 ... P00352 37289586
    799579 8ene:D (2.64) BS01 NAD 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36
    GO:0001523 ... P00352 37289586
    799580 8eng:F (1.25) BS01 dna ? GO:0003700 ... P17947 37352101
    799581 8eng:F (1.25) BS02 dna ? GO:0003700 ... P17947 37352101
    799582 8enh:A (2.50003) BS01 peptide ? N/A F4NBT2 N/A
    799583 8enh:E (2.50003) BS01 peptide N/A N/A N/A N/A
    799584 8enh:F (2.50003) BS01 peptide ? N/A F4NBT2 N/A
    799585 8enh:J (2.50003) BS01 peptide N/A N/A N/A N/A
    799586 8enh:K (2.50003) BS01 peptide ? N/A F4NBT2 N/A
    799587 8enh:O (2.50003) BS01 peptide N/A N/A N/A N/A
    799588 8enh:P (2.50003) BS01 peptide ? N/A F4NBT2 N/A
    799589 8enh:T (2.50003) BS01 peptide N/A N/A N/A N/A
    799590 8eni:A (2.4) BS01 WNE 6.3.4.15 GO:0003677 ... A0A0H3JRH8 29131575
    799591 8enj:A (2.81) BS01 WNK 2.7.11.24 GO:0000165 ... P53779 37776574
    799592 8enk:A (2.5) BS01 rna 3.6.4.13 GO:0000245 ... Q13838 37578863
    799593 8enk:A (2.5) BS02 ADP 3.6.4.13 GO:0000245 ... Q13838 37578863
    799594 8enk:A (2.5) BS03 BEF 3.6.4.13 GO:0000245 ... Q13838 37578863
    799595 8enk:B (2.5) BS01 rna 3.6.4.13 GO:0000245 ... Q13838 37578863
    799596 8enk:B (2.5) BS02 ADP 3.6.4.13 GO:0000245 ... Q13838 37578863
    799597 8enk:B (2.5) BS03 BEF 3.6.4.13 GO:0000245 ... Q13838 37578863
    799598 8enl:A (2.37) BS01 ICS 1.18.6.1 GO:0009399 ... P07328 36841829
    799599 8enl:A (2.37) BS02 CLF 1.18.6.1 GO:0009399 ... P07328 36841829
    799600 8enl:B (2.37) BS01 CLF 1.18.6.1 GO:0009399 ... P07329 36841829

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).