SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1 2 3 4 5 6 7 8 9 10 11 12 13 14 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    601 10yd:C (2.8) BS01 dna N/A N/A P0C0S8 N/A
    602 10yd:C (2.8) BS02 dna N/A N/A P0C0S8 N/A
    603 10yd:D (2.8) BS01 dna N/A N/A P62807 N/A
    604 10yd:D (2.8) BS02 dna N/A N/A P62807 N/A
    605 10yd:E (2.8) BS01 dna N/A N/A Q71DI3 N/A
    606 10yd:E (2.8) BS02 dna N/A N/A Q71DI3 N/A
    607 10yd:F (2.8) BS01 dna N/A N/A P62805 N/A
    608 10yd:F (2.8) BS02 dna N/A N/A P62805 N/A
    609 10yd:G (2.8) BS01 dna N/A N/A P0C0S8 N/A
    610 10yd:G (2.8) BS02 dna N/A N/A P0C0S8 N/A
    611 10yd:H (2.8) BS01 dna N/A N/A P62807 N/A
    612 10yd:H (2.8) BS02 dna N/A N/A P62807 N/A
    613 10ye:A (2.5) BS01 dna N/A N/A Q71DI3 N/A
    614 10ye:A (2.5) BS02 dna N/A N/A Q71DI3 N/A
    615 10ye:B (2.5) BS01 dna N/A N/A P62805 N/A
    616 10ye:B (2.5) BS02 dna N/A N/A P62805 N/A
    617 10ye:C (2.5) BS01 dna N/A N/A P0C0S8 N/A
    618 10ye:C (2.5) BS02 dna N/A N/A P0C0S8 N/A
    619 10ye:D (2.5) BS01 dna N/A N/A Q99879 N/A
    620 10ye:D (2.5) BS02 dna N/A N/A Q99879 N/A
    621 10ye:E (2.5) BS01 dna N/A N/A Q71DI3 N/A
    622 10ye:E (2.5) BS02 dna N/A N/A Q71DI3 N/A
    623 10ye:E (2.5) BS03 dna N/A N/A Q71DI3 N/A
    624 10ye:F (2.5) BS01 dna N/A N/A P62805 N/A
    625 10ye:F (2.5) BS02 dna N/A N/A P62805 N/A
    626 10ye:G (2.5) BS01 dna N/A N/A P0C0S8 N/A
    627 10ye:G (2.5) BS02 dna N/A N/A P0C0S8 N/A
    628 10ye:H (2.5) BS01 dna N/A N/A Q99879 N/A
    629 10ye:H (2.5) BS02 dna N/A N/A Q99879 N/A
    630 10ye:L (2.5) BS01 dna N/A N/A P49916 N/A
    631 10ye:L (2.5) BS02 dna N/A N/A P49916 N/A
    632 10ye:L (2.5) BS03 AMP N/A N/A P49916 N/A
    633 10yf:A (3.0) BS01 dna N/A N/A Q71DI3 N/A
    634 10yf:A (3.0) BS02 dna N/A N/A Q71DI3 N/A
    635 10yf:B (3.0) BS01 dna N/A N/A P62805 N/A
    636 10yf:B (3.0) BS02 dna N/A N/A P62805 N/A
    637 10yf:C (3.0) BS01 dna N/A N/A Q96KK5 N/A
    638 10yf:C (3.0) BS02 dna N/A N/A Q96KK5 N/A
    639 10yf:D (3.0) BS01 dna N/A N/A Q5QNW6 N/A
    640 10yf:D (3.0) BS02 dna N/A N/A Q5QNW6 N/A
    641 10yf:E (3.0) BS01 dna N/A N/A Q71DI3 N/A
    642 10yf:E (3.0) BS02 dna N/A N/A Q71DI3 N/A
    643 10yf:E (3.0) BS03 dna N/A N/A Q71DI3 N/A
    644 10yf:F (3.0) BS01 dna N/A N/A P62805 N/A
    645 10yf:F (3.0) BS02 dna N/A N/A P62805 N/A
    646 10yf:G (3.0) BS01 dna N/A N/A Q96KK5 N/A
    647 10yf:G (3.0) BS02 dna N/A N/A Q96KK5 N/A
    648 10yf:H (3.0) BS01 dna N/A N/A Q5QNW6 N/A
    649 10yf:H (3.0) BS02 dna N/A N/A Q5QNW6 N/A
    650 10yf:L (3.0) BS01 dna N/A N/A P49916 N/A
    651 10yf:L (3.0) BS02 dna N/A N/A P49916 N/A
    652 10yf:L (3.0) BS03 AMP N/A N/A P49916 N/A
    653 10yg:A (3.4) BS01 dna N/A N/A Q71DI3 N/A
    654 10yg:A (3.4) BS02 dna N/A N/A Q71DI3 N/A
    655 10yg:B (3.4) BS01 dna N/A N/A P62805 N/A
    656 10yg:B (3.4) BS02 dna N/A N/A P62805 N/A
    657 10yg:C (3.4) BS01 dna N/A N/A P0C0S8 N/A
    658 10yg:C (3.4) BS02 dna N/A N/A P0C0S8 N/A
    659 10yg:D (3.4) BS01 dna N/A N/A Q99879 N/A
    660 10yg:D (3.4) BS02 dna N/A N/A Q99879 N/A
    661 10yg:E (3.4) BS01 dna N/A N/A Q71DI3 N/A
    662 10yg:E (3.4) BS02 dna N/A N/A Q71DI3 N/A
    663 10yg:F (3.4) BS01 dna N/A N/A P62805 N/A
    664 10yg:F (3.4) BS02 dna N/A N/A P62805 N/A
    665 10yg:G (3.4) BS01 dna N/A N/A P0C0S8 N/A
    666 10yg:G (3.4) BS02 dna N/A N/A P0C0S8 N/A
    667 10yg:H (3.4) BS01 dna N/A N/A Q99879 N/A
    668 10yg:H (3.4) BS02 dna N/A N/A Q99879 N/A
    669 10yg:H (3.4) BS03 dna N/A N/A Q99879 N/A
    670 10yg:L (3.4) BS01 dna N/A N/A P49916 N/A
    671 10yg:L (3.4) BS02 AMP N/A N/A P49916 N/A
    672 10yh:A (2.9) BS01 dna N/A N/A Q71DI3 N/A
    673 10yh:A (2.9) BS02 dna N/A N/A Q71DI3 N/A
    674 10yh:B (2.9) BS01 dna N/A N/A P62805 N/A
    675 10yh:B (2.9) BS02 dna N/A N/A P62805 N/A
    676 10yh:C (2.9) BS01 dna N/A N/A Q96KK5 N/A
    677 10yh:C (2.9) BS02 dna N/A N/A Q96KK5 N/A
    678 10yh:D (2.9) BS01 dna N/A N/A Q99879 N/A
    679 10yh:D (2.9) BS02 dna N/A N/A Q99879 N/A
    680 10yh:E (2.9) BS01 dna N/A N/A Q71DI3 N/A
    681 10yh:E (2.9) BS02 dna N/A N/A Q71DI3 N/A
    682 10yh:F (2.9) BS01 dna N/A N/A P62805 N/A
    683 10yh:F (2.9) BS02 dna N/A N/A P62805 N/A
    684 10yh:G (2.9) BS01 dna N/A N/A Q96KK5 N/A
    685 10yh:G (2.9) BS02 dna N/A N/A Q96KK5 N/A
    686 10yh:H (2.9) BS01 dna N/A N/A Q99879 N/A
    687 10yh:H (2.9) BS02 dna N/A N/A Q99879 N/A
    688 10yh:L (2.9) BS01 dna N/A N/A P49916 N/A
    689 10yh:L (2.9) BS02 dna N/A N/A P49916 N/A
    690 10yh:L (2.9) BS03 AMP N/A N/A P49916 N/A
    691 10yi:A (2.9) BS01 dna N/A N/A Q71DI3 N/A
    692 10yi:A (2.9) BS02 dna N/A N/A Q71DI3 N/A
    693 10yi:B (2.9) BS01 dna N/A N/A P62805 N/A
    694 10yi:B (2.9) BS02 dna N/A N/A P62805 N/A
    695 10yi:C (2.9) BS01 dna N/A N/A Q96KK5 N/A
    696 10yi:C (2.9) BS02 dna N/A N/A Q96KK5 N/A
    697 10yi:D (2.9) BS01 dna N/A N/A Q99879 N/A
    698 10yi:D (2.9) BS02 dna N/A N/A Q99879 N/A
    699 10yi:E (2.9) BS01 dna N/A N/A Q71DI3 N/A
    700 10yi:E (2.9) BS02 dna N/A N/A Q71DI3 N/A
    701 10yi:F (2.9) BS01 dna N/A N/A P62805 N/A
    702 10yi:F (2.9) BS02 dna N/A N/A P62805 N/A
    703 10yi:G (2.9) BS01 dna N/A N/A Q96KK5 N/A
    704 10yi:G (2.9) BS02 dna N/A N/A Q96KK5 N/A
    705 10yi:H (2.9) BS01 dna N/A N/A Q99879 N/A
    706 10yi:H (2.9) BS02 dna N/A N/A Q99879 N/A
    707 10yi:L (2.9) BS01 dna N/A N/A P49916 N/A
    708 10yi:L (2.9) BS02 AMP N/A N/A P49916 N/A
    709 110m:A (1.77) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    710 110m:A (1.77) BS02 MNC 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    711 111m:A (1.88) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    712 112m:A (2.34) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    713 112m:A (2.34) BS02 NPN 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    714 117e:A (2.15) BS01 MN 3.6.1.1 GO:0000287 ... P00817 9878371
    715 117e:A (2.15) BS02 MN 3.6.1.1 GO:0000287 ... P00817 9878371
    716 117e:A (2.15) BS03 MN 3.6.1.1 GO:0000287 ... P00817 9878371
    717 117e:A (2.15) BS04 PO4 3.6.1.1 GO:0000287 ... P00817 9878371
    718 117e:A (2.15) BS05 PO4 3.6.1.1 GO:0000287 ... P00817 9878371
    719 117e:B (2.15) BS01 MN 3.6.1.1 GO:0000287 ... P00817 9878371
    720 117e:B (2.15) BS02 MN 3.6.1.1 GO:0000287 ... P00817 9878371
    721 117e:B (2.15) BS03 MN 3.6.1.1 GO:0000287 ... P00817 9878371
    722 117e:B (2.15) BS04 MN 3.6.1.1 GO:0000287 ... P00817 9878371
    723 117e:B (2.15) BS05 PO4 3.6.1.1 GO:0000287 ... P00817 9878371
    724 11as:A (2.5) BS01 ASN 6.3.1.1 GO:0004071 ... P00963 9437423
    725 11as:B (2.5) BS01 ASN 6.3.1.1 GO:0004071 ... P00963 9437423
    726 11ba:A (2.06) BS01 UPA 4.6.1.18 GO:0003676 ... P00669 10082366
    727 11ba:B (2.06) BS01 UPA 4.6.1.18 GO:0003676 ... P00669 10082366
    728 11bg:A (1.9) BS01 U2G 4.6.1.18 GO:0003676 ... P00669 10543951
    729 11bg:A (1.9) BS02 U2G 4.6.1.18 GO:0003676 ... P00669 10543951
    730 11bg:A (1.9) BS03 U2G 4.6.1.18 GO:0003676 ... P00669 10543951
    731 11bg:B (1.9) BS01 U2G 4.6.1.18 GO:0003676 ... P00669 10543951
    732 11bg:B (1.9) BS02 U2G 4.6.1.18 GO:0003676 ... P00669 10543951
    733 11bl:A (2.9) BS01 ADP N/A GO:0004747 ... A0A0H3GDY9 N/A
    734 11bl:B (2.9) BS01 ADP N/A GO:0004747 ... A0A0H3GDY9 N/A
    735 11bl:C (2.9) BS01 ADP N/A GO:0004747 ... A0A0H3GDY9 N/A
    736 11bl:D (2.9) BS01 ADP N/A GO:0004747 ... A0A0H3GDY9 N/A
    737 11gs:A (2.3) BS01 GSH 2.5.1.18 GO:0000122 ... P09211 9426214
    738 11gs:A (2.3) BS02 EAA 2.5.1.18 GO:0000122 ... P09211 9426214 BindingDB: IC50=2.6e+4nM
    739 11gs:B (2.3) BS01 GSH 2.5.1.18 GO:0000122 ... P09211 9426214
    740 11gs:B (2.3) BS02 EAA 2.5.1.18 GO:0000122 ... P09211 9426214 BindingDB: IC50=2.6e+4nM
    741 11mm:A (2.69) BS01 A1C9V N/A N/A Q8NEB9 N/A
    742 11qe:A (1.23) BS01 GDP N/A N/A P01116 39484452
    743 11qe:A (1.23) BS02 MG N/A N/A P01116 39484452
    744 11qf:A (1.87) BS01 dna N/A N/A N/A N/A
    745 11qf:A (1.87) BS02 dna N/A N/A N/A N/A
    746 11qf:A (1.87) BS03 CA N/A N/A N/A N/A
    747 11qf:A (1.87) BS04 CA N/A N/A N/A N/A
    748 11qf:B (1.87) BS01 dna N/A N/A N/A N/A
    749 11qf:B (1.87) BS02 dna N/A N/A N/A N/A
    750 11qf:B (1.87) BS03 CA N/A N/A N/A N/A
    751 11qf:B (1.87) BS04 CA N/A N/A N/A N/A
    752 11yc:B (2.41) BS01 A1DAY N/A N/A Q8NEB9 N/A
    753 121p:A (1.54) BS01 MG 3.6.5.2 GO:0003924 ... P01112 N/A
    754 12as:A (2.2) BS01 ASN 6.3.1.1 GO:0004071 ... P00963 9437423
    755 12as:A (2.2) BS02 AMP 6.3.1.1 GO:0004071 ... P00963 9437423
    756 12as:B (2.2) BS01 ASN 6.3.1.1 GO:0004071 ... P00963 9437423
    757 12as:B (2.2) BS02 AMP 6.3.1.1 GO:0004071 ... P00963 9437423
    758 12ca:A (2.4) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 1910042
    759 12gs:A (2.1) BS01 0HH 2.5.1.18 GO:0000122 ... P09211 10452896
    760 12gs:B (2.1) BS01 0HH 2.5.1.18 GO:0000122 ... P09211 10452896
    761 13gs:A (1.9) BS01 GSH 2.5.1.18 GO:0000122 ... P09211 10452896
    762 13gs:A (1.9) BS02 SAS 2.5.1.18 GO:0000122 ... P09211 10452896 MOAD: Ki=24uM
    763 13gs:B (1.9) BS01 GSH 2.5.1.18 GO:0000122 ... P09211 10452896
    764 13gs:B (1.9) BS02 SAS 2.5.1.18 GO:0000122 ... P09211 10452896 MOAD: Ki=24uM
    765 13mi:A (2.08) BS01 ZN N/A N/A P0DTD1 41638277
    766 13mi:A (2.08) BS02 A1AY5 N/A N/A P0DTD1 41638277
    767 13mi:A (2.08) BS03 A1AY5 N/A N/A P0DTD1 41638277
    768 13mi:A (2.08) BS04 A1AY5 N/A N/A P0DTD1 41638277
    769 13mj:A (2.06) BS01 ZN N/A N/A P0DTD1 41638277
    770 13mk:A (2.26) BS01 ZN N/A N/A P0DTD1 41638277
    771 13mk:A (2.26) BS02 A1AYD N/A N/A P0DTD1 41638277
    772 13ml:A (2.16) BS01 ZN N/A N/A P0DTD1 41638277
    773 13ml:A (2.16) BS02 A1CT1 N/A N/A P0DTD1 41638277
    774 13mm:A (2.14) BS01 ZN N/A N/A P0DTD1 41638277
    775 13mm:A (2.14) BS02 6OT N/A N/A P0DTD1 41638277
    776 13mn:A (2.35) BS01 A1CT2 N/A N/A P0DTD1 41638277
    777 13mo:A (2.45) BS01 ZN N/A N/A P0DTD1 41638277
    778 13mo:A (2.45) BS02 A1CUB N/A N/A P0DTD1 41638277
    779 13mo:A (2.45) BS03 A1CUB N/A N/A P0DTD1 41638277
    780 13mp:A (2.42) BS01 ZN N/A N/A P0DTD1 41638277
    781 13mp:A (2.42) BS02 A1CUC N/A N/A P0DTD1 41638277
    782 13mp:A (2.42) BS03 A1CUC N/A N/A P0DTD1 41638277
    783 13mq:A (2.02) BS01 ZN N/A N/A P0DTD1 41638277
    784 13mq:A (2.02) BS02 VN9 N/A N/A P0DTD1 41638277
    785 13mr:A (2.08) BS01 ZN N/A N/A P0DTD1 41638277
    786 13mr:A (2.08) BS02 A1CUD N/A N/A P0DTD1 41638277
    787 13ms:A (2.18) BS01 ZN N/A N/A P0DTD1 41638277
    788 13ms:A (2.18) BS02 A1CUE N/A N/A P0DTD1 41638277
    789 13mt:A (1.94) BS01 ZN N/A N/A P0DTD1 41638277
    790 13mu:A (1.93) BS01 ZN N/A N/A P0DTD1 41638277
    791 13mu:A (1.93) BS02 A1AY2 N/A N/A P0DTD1 41638277
    792 13mv:A (2.47) BS01 ZN N/A N/A P0DTD1 41638277
    793 13mv:A (2.47) BS02 A1CUK N/A N/A P0DTD1 41638277
    794 13mw:A (2.1) BS01 ZN N/A N/A P0DTD1 41638277
    795 13mw:A (2.1) BS02 A1CUL N/A N/A P0DTD1 41638277
    796 13mx:A (2.02) BS01 ZN N/A N/A P0DTD1 41638277
    797 13my:A (2.0) BS01 ZN N/A N/A P0DTD1 41638277
    798 13my:A (2.0) BS02 A1CUO N/A N/A P0DTD1 41638277
    799 13mz:A (2.09) BS01 ZN N/A N/A P0DTD1 41638277
    800 13mz:A (2.09) BS02 A1CUP N/A N/A P0DTD1 41638277

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).