SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    800601 8eu2:L (2.93) BS02 dna N/A N/A N/A 37384669
    800602 8eu2:M (2.93) BS01 dna N/A N/A N/A 37384669
    800603 8eu2:M (2.93) BS02 dna N/A N/A N/A 37384669
    800604 8eu2:N (2.93) BS01 dna N/A N/A N/A 37384669
    800605 8eu2:N (2.93) BS02 dna N/A N/A N/A 37384669
    800606 8eu2:O (2.93) BS01 dna N/A N/A N/A 37384669
    800607 8eu2:O (2.93) BS02 dna N/A N/A N/A 37384669
    800608 8eu2:P (2.93) BS01 dna N/A N/A N/A 37384669
    800609 8eu2:P (2.93) BS02 dna N/A N/A N/A 37384669
    800610 8eu3:A (3.62) BS01 PCG ? GO:0005216 ... Q16281 37463923
    800611 8eu3:B (3.62) BS01 PCG ? GO:0005216 ... Q16281 37463923
    800612 8eu3:C (3.62) BS01 PCG ? GO:0005216 ... Q16281 37463923
    800613 8eu3:D (3.62) BS01 PCG ? GO:0001750 ... Q9NQW8 37463923
    800614 8eu9:Q (3.48) BS01 peptide 3.6.4.- N/A P53115 37384669
    800615 8eu9:T (3.48) BS01 ADP 3.6.4.12 GO:0000492 ... Q03940 37384669
    800616 8eu9:U (3.48) BS01 ADP 3.6.4.12 GO:0000492 ... Q12464 37384669
    800617 8eu9:U (3.48) BS02 ADP 3.6.4.12 GO:0000492 ... Q12464 37384669
    800618 8eu9:V (3.48) BS01 peptide 3.6.4.12 GO:0000492 ... Q03940 37384669
    800619 8eu9:V (3.48) BS02 ADP 3.6.4.12 GO:0000492 ... Q03940 37384669
    800620 8eu9:W (3.48) BS01 peptide 3.6.4.12 GO:0000492 ... Q12464 37384669
    800621 8eu9:W (3.48) BS02 ADP 3.6.4.12 GO:0000492 ... Q12464 37384669
    800622 8eu9:X (3.48) BS01 peptide 3.6.4.12 GO:0000492 ... Q03940 37384669
    800623 8eu9:X (3.48) BS02 ADP 3.6.4.12 GO:0000492 ... Q03940 37384669
    800624 8eu9:Y (3.48) BS01 ADP 3.6.4.12 GO:0000492 ... Q12464 37384669
    800625 8eua:A (3.1) BS01 WUK 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0006508 ... P0DTD1 36977673
    800626 8eua:A (3.1) BS02 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0006508 ... P0DTD1 36977673
    800627 8eub:AA (2.52) BS01 rna ? GO:0002181 ... P0CX45 37595043
    800628 8eub:AA (2.52) BS02 rna ? GO:0002181 ... P0CX45 37595043
    800629 8eub:AB (2.52) BS01 rna ? GO:0000027 ... P14126 37595043
    800630 8eub:AC (2.52) BS01 rna ? GO:0003735 ... N/A 37595043
    800631 8eub:AC (2.52) BS02 rna ? GO:0003735 ... N/A 37595043
    800632 8eub:AD (2.52) BS01 rna ? GO:0003735 ... N/A 37595043
    800633 8eub:AD (2.52) BS02 rna ? GO:0003735 ... N/A 37595043
    800634 8eub:AE (2.52) BS01 rna ? GO:0000027 ... Q02326 37595043
    800635 8eub:AF (2.52) BS01 rna ? GO:0000463 ... P05737 37595043
    800636 8eub:AF (2.52) BS02 rna ? GO:0000463 ... P05737 37595043
    800637 8eub:AG (2.52) BS01 rna ? GO:0000470 ... P17076 37595043
    800638 8eub:AG (2.52) BS02 rna ? GO:0000470 ... P17076 37595043
    800639 8eub:AG (2.52) BS03 MG ? GO:0000470 ... P17076 37595043
    800640 8eub:AH (2.52) BS01 rna ? GO:0002181 ... P05738 37595043
    800641 8eub:AI (2.52) BS01 rna ? GO:0003735 ... N/A 37595043
    800642 8eub:AI (2.52) BS02 rna ? GO:0003735 ... N/A 37595043
    800643 8eub:AJ (2.52) BS01 rna ? GO:0003735 ... N/A 37595043
    800644 8eub:AJ (2.52) BS02 rna ? GO:0003735 ... N/A 37595043
    800645 8eub:AL (2.52) BS01 rna ? GO:0002181 ... Q12690 37595043
    800646 8eub:AL (2.52) BS02 rna ? GO:0002181 ... Q12690 37595043
    800647 8eub:AM (2.52) BS01 rna ? GO:0000027 ... P36105 37595043
    800648 8eub:AN (2.52) BS01 rna ? GO:0000470 ... P05748 37595043
    800649 8eub:AN (2.52) BS02 rna ? GO:0000470 ... P05748 37595043
    800650 8eub:AN (2.52) BS03 MG ? GO:0000470 ... P05748 37595043
    800651 8eub:AN (2.52) BS04 MG ? GO:0000470 ... P05748 37595043
    800652 8eub:AO (2.52) BS01 rna ? GO:0000470 ... P26784 37595043
    800653 8eub:AO (2.52) BS02 MG ? GO:0000470 ... P26784 37595043
    800654 8eub:AO (2.52) BS03 MG ? GO:0000470 ... P26784 37595043
    800655 8eub:AP (2.52) BS01 rna ? GO:0000448 ... P05740 37595043
    800656 8eub:AP (2.52) BS02 rna ? GO:0000448 ... P05740 37595043
    800657 8eub:AQ (2.52) BS01 rna ? GO:0002181 ... P0CX49 37595043
    800658 8eub:AR (2.52) BS01 rna ? GO:0002181 ... P0CX82 37595043
    800659 8eub:AR (2.52) BS02 rna ? GO:0002181 ... P0CX82 37595043
    800660 8eub:AS (2.52) BS01 rna ? GO:0003735 ... B3LMD0 37595043
    800661 8eub:AS (2.52) BS02 rna ? GO:0003735 ... B3LMD0 37595043
    800662 8eub:AT (2.52) BS01 rna ? GO:0002181 ... Q02753 37595043
    800663 8eub:AT (2.52) BS02 rna ? GO:0002181 ... Q02753 37595043
    800664 8eub:AU (2.52) BS01 rna ? GO:0002181 ... P05749 37595043
    800665 8eub:AV (2.52) BS01 rna ? GO:0002181 ... P0CX41 37595043
    800666 8eub:AV (2.52) BS02 rna ? GO:0002181 ... P0CX41 37595043
    800667 8eub:AW (2.52) BS01 rna ? GO:0003735 ... N/A 37595043
    800668 8eub:AX (2.52) BS01 rna ? GO:0000027 ... P04456 37595043
    800669 8eub:AX (2.52) BS02 rna ? GO:0000027 ... P04456 37595043
    800670 8eub:AY (2.52) BS01 rna ? GO:0002181 ... P05743 37595043
    800671 8eub:AY (2.52) BS02 rna ? GO:0002181 ... P05743 37595043
    800672 8eub:AZ (2.52) BS01 rna ? GO:0002181 ... P0C2H6 37595043
    800673 8eub:Aa (2.52) BS01 rna ? GO:0002181 ... P02406 37595043
    800674 8eub:Ab (2.52) BS01 rna ? GO:0003735 ... N/A 37595043
    800675 8eub:Ac (2.52) BS01 rna ? GO:0002181 ... P14120 37595043
    800676 8eub:Ad (2.52) BS01 rna ? GO:0002181 ... P0C2H8 37595043
    800677 8eub:Ae (2.52) BS01 rna ? GO:0003735 ... N/A 37595043
    800678 8eub:Ae (2.52) BS02 MG ? GO:0003735 ... N/A 37595043
    800679 8eub:Af (2.52) BS01 rna ? GO:0000027 ... P05744 37595043
    800680 8eub:Af (2.52) BS02 MG ? GO:0000027 ... P05744 37595043
    800681 8eub:Af (2.52) BS03 MG ? GO:0000027 ... P05744 37595043
    800682 8eub:Ag (2.52) BS01 rna ? GO:0002181 ... P87262 37595043
    800683 8eub:Ah (2.52) BS01 rna ? GO:0000463 ... P0CX84 37595043
    800684 8eub:Ah (2.52) BS02 rna ? GO:0000463 ... P0CX84 37595043
    800685 8eub:Ah (2.52) BS03 MG ? GO:0000463 ... P0CX84 37595043
    800686 8eub:Ai (2.52) BS01 rna ? GO:0000470 ... P05745 37595043
    800687 8eub:Aj (2.52) BS01 rna ? GO:0000448 ... P49166 37595043
    800688 8eub:Aj (2.52) BS02 rna ? GO:0000448 ... P49166 37595043
    800689 8eub:Aj (2.52) BS03 MG ? GO:0000448 ... P49166 37595043
    800690 8eub:Ak (2.52) BS01 rna ? GO:0003735 ... N/A 37595043
    800691 8eub:Al (2.52) BS01 rna ? GO:0002181 ... P04650 37595043
    800692 8eub:Al (2.52) BS02 rna ? GO:0002181 ... P04650 37595043
    800693 8eub:Am (2.52) BS01 rna ? GO:0000027 ... P0CH08 37595043
    800694 8eub:Ao (2.52) BS01 rna ? GO:0002181 ... P0CX27 37595043
    800695 8eub:Ao (2.52) BS02 ZN ? GO:0002181 ... P0CX27 37595043
    800696 8eub:Ap (2.52) BS01 rna ? GO:0002181 ... P0CX25 37595043
    800697 8eub:BA (2.52) BS01 rna ? GO:0000028 ... P32905 37595043
    800698 8eub:BB (2.52) BS01 rna ? GO:0003735 ... N/A 37595043
    800699 8eub:BC (2.52) BS01 rna ? GO:0003723 ... N/A 37595043
    800700 8eub:BD (2.52) BS01 rna ? GO:0003723 ... N/A 37595043
    800701 8eub:BE (2.52) BS01 rna ? GO:0002181 ... P0CX35 37595043
    800702 8eub:BF (2.52) BS01 rna ? GO:0003723 ... A0A1L4AA68 37595043
    800703 8eub:BF (2.52) BS02 rna ? GO:0003723 ... A0A1L4AA68 37595043
    800704 8eub:BG (2.52) BS01 rna ? GO:0000462 ... P0CX37 37595043
    800705 8eub:BH (2.52) BS01 rna ? GO:0002181 ... P26786 37595043
    800706 8eub:BI (2.52) BS01 rna ? GO:0000462 ... P0CX39 37595043
    800707 8eub:BI (2.52) BS02 rna ? GO:0000462 ... P0CX39 37595043
    800708 8eub:BJ (2.52) BS01 rna ? GO:0000462 ... O13516 37595043
    800709 8eub:BK (2.52) BS01 rna ? GO:0000054 ... Q08745 37595043
    800710 8eub:BL (2.52) BS01 rna ? GO:0000028 ... P0CX47 37595043
    800711 8eub:BM (2.52) BS01 rna ? GO:0003735 ... N/A 37595043
    800712 8eub:BN (2.52) BS01 rna ? GO:0000462 ... P05756 37595043
    800713 8eub:BO (2.52) BS01 rna ? GO:0000028 ... P06367 37595043
    800714 8eub:BO (2.52) BS02 rna ? GO:0000028 ... P06367 37595043
    800715 8eub:BP (2.52) BS01 rna ? GO:0003723 ... N/A 37595043
    800716 8eub:BQ (2.52) BS01 rna ? GO:0000462 ... P0CX51 37595043
    800717 8eub:BR (2.52) BS01 rna ? GO:0000028 ... P02407 37595043
    800718 8eub:BS (2.52) BS01 rna ? GO:0000054 ... P0CX55 37595043
    800719 8eub:BT (2.52) BS01 rna ? GO:0000054 ... P07280 37595043
    800720 8eub:BU (2.52) BS01 rna ? GO:0003723 ... N/A 37595043
    800721 8eub:BV (2.52) BS01 rna ? GO:0000447 ... P0C0V8 37595043
    800722 8eub:BW (2.52) BS01 rna ? GO:0003735 ... N/A 37595043
    800723 8eub:BX (2.52) BS01 rna ? GO:0003735 ... P0CY39 37595043
    800724 8eub:BY (2.52) BS01 rna ? GO:0000462 ... P0CX31 37595043
    800725 8eub:BZ (2.52) BS01 rna ? N/A N/A 37595043
    800726 8eub:BZ (2.52) BS02 rna ? N/A N/A 37595043
    800727 8eub:Ba (2.52) BS01 rna ? GO:0003735 ... N/A 37595043
    800728 8eub:Bb (2.52) BS01 rna ? GO:0000028 ... P35997 37595043
    800729 8eub:Bc (2.52) BS01 rna ? GO:0003735 ... N/A 37595043
    800730 8eub:Bd (2.52) BS01 rna ? GO:0003735 ... N/A 37595043
    800731 8eub:Be (2.52) BS01 rna ? GO:0002181 ... P0CX33 37595043
    800732 8eub:Bf (2.52) BS01 rna ? GO:0003735 ... N/A 37595043
    800733 8eub:Bg (2.52) BS01 rna ? GO:0001965 ... P38011 37595043
    800734 8eub:DC (2.52) BS01 rna 3.6.5.- GO:0003746 ... P32324 37595043
    800735 8eub:DC (2.52) BS02 rna 3.6.5.- GO:0003746 ... P32324 37595043
    800736 8eub:DC (2.52) BS03 rna 3.6.5.- GO:0003746 ... P32324 37595043
    800737 8eub:DC (2.52) BS04 GDP 3.6.5.- GO:0003746 ... P32324 37595043
    800738 8eub:E (2.52) BS01 rna ? GO:0003723 ... N/A 37595043
    800739 8eub:E (2.52) BS02 rna ? GO:0003723 ... N/A 37595043
    800740 8eub:VA (2.52) BS01 rna ? GO:0000027 ... P05317 37595043
    800741 8euc:A (3.61) BS01 PCG ? GO:0005216 ... Q16281 37463923
    800742 8euc:B (3.61) BS01 PCG ? GO:0005216 ... Q16281 37463923
    800743 8euc:C (3.61) BS01 PCG ? GO:0005216 ... Q16281 37463923
    800744 8euc:D (3.61) BS01 PCG ? GO:0001750 ... Q9NQW8 37463923
    800745 8eud:A (2.37) BS01 WUR 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    800746 8eud:B (2.37) BS01 WUR 3.2.1.106 GO:0004573 ... G0SFD1 36762932
    800747 8eue:A (3.48) BS01 dna ? GO:0000786 ... P84233 37384669
    800748 8eue:A (3.48) BS02 dna ? GO:0000786 ... P84233 37384669
    800749 8eue:B (3.48) BS01 dna ? GO:0000786 ... P62799 37384669
    800750 8eue:B (3.48) BS02 dna ? GO:0000786 ... P62799 37384669
    800751 8eue:C (3.48) BS01 dna ? GO:0000786 ... P06897 37384669
    800752 8eue:C (3.48) BS02 dna ? GO:0000786 ... P06897 37384669
    800753 8eue:D (3.48) BS01 dna ? GO:0000786 ... P02281 37384669
    800754 8eue:D (3.48) BS02 dna ? GO:0000786 ... P02281 37384669
    800755 8eue:E (3.48) BS01 dna ? GO:0000786 ... P84233 37384669
    800756 8eue:E (3.48) BS02 dna ? GO:0000786 ... P84233 37384669
    800757 8eue:F (3.48) BS01 dna ? GO:0000786 ... P62799 37384669
    800758 8eue:F (3.48) BS02 dna ? GO:0000786 ... P62799 37384669
    800759 8eue:H (3.48) BS01 dna ? GO:0000786 ... P02281 37384669
    800760 8eue:H (3.48) BS02 dna ? GO:0000786 ... P02281 37384669
    800761 8eue:K (3.48) BS01 dna N/A N/A N/A 37384669
    800762 8eue:K (3.48) BS02 dna N/A N/A N/A 37384669
    800763 8euf:Q (3.41) BS01 peptide 3.6.4.- GO:0000722 ... P53115 37384669
    800764 8euf:T (3.41) BS01 ADP 3.6.4.12 GO:0000492 ... Q03940 37384669
    800765 8euf:U (3.41) BS01 ADP 3.6.4.12 GO:0000492 ... Q12464 37384669
    800766 8euf:V (3.41) BS01 peptide 3.6.4.12 GO:0000492 ... Q03940 37384669
    800767 8euf:V (3.41) BS02 ADP 3.6.4.12 GO:0000492 ... Q03940 37384669
    800768 8euf:W (3.41) BS01 peptide 3.6.4.12 GO:0000492 ... Q12464 37384669
    800769 8euf:W (3.41) BS02 ADP 3.6.4.12 GO:0000492 ... Q12464 37384669
    800770 8euf:X (3.41) BS01 peptide 3.6.4.12 GO:0000492 ... Q03940 37384669
    800771 8euf:X (3.41) BS02 ADP 3.6.4.12 GO:0000492 ... Q03940 37384669
    800772 8euf:Y (3.41) BS01 ADP 3.6.4.12 GO:0000492 ... Q12464 37384669
    800773 8eug:3 (2.8) BS01 rna ? GO:0000460 ... Q9UTE6 36423630
    800774 8eug:8 (2.8) BS01 rna ? GO:0002181 ... P05767 36423630
    800775 8eug:8 (2.8) BS02 rna ? GO:0002181 ... P05767 36423630
    800776 8eug:A (2.8) BS01 rna ? GO:0002181 ... P0CT70 36423630
    800777 8eug:B (2.8) BS01 rna ? GO:0002181 ... P40372 36423630
    800778 8eug:C (2.8) BS01 rna ? GO:0002181 ... Q9P784 36423630
    800779 8eug:C (2.8) BS02 rna ? GO:0002181 ... Q9P784 36423630
    800780 8eug:D (2.8) BS01 rna ? GO:0000027 ... P52822 36423630
    800781 8eug:D (2.8) BS02 rna ? GO:0000027 ... P52822 36423630
    800782 8eug:E (2.8) BS01 rna ? GO:0002181 ... P79071 36423630
    800783 8eug:F (2.8) BS01 rna ? GO:0000463 ... P25457 36423630
    800784 8eug:F (2.8) BS02 rna ? GO:0000463 ... P25457 36423630
    800785 8eug:G (2.8) BS01 rna ? GO:0000470 ... O13672 36423630
    800786 8eug:G (2.8) BS02 rna ? GO:0000470 ... O13672 36423630
    800787 8eug:H (2.8) BS01 rna ? GO:0002181 ... Q10232 36423630
    800788 8eug:I (2.8) BS01 rna ? GO:0002181 ... Q09127 36423630
    800789 8eug:I (2.8) BS02 rna ? GO:0002181 ... Q09127 36423630
    800790 8eug:J (2.8) BS01 rna ? GO:0002181 ... P0CT77 36423630
    800791 8eug:J (2.8) BS02 rna ? GO:0002181 ... P0CT77 36423630
    800792 8eug:K (2.8) BS01 rna ? GO:0002181 ... Q9HGL8 36423630
    800793 8eug:L (2.8) BS01 rna ? GO:0002181 ... O74175 36423630
    800794 8eug:L (2.8) BS02 rna ? GO:0002181 ... O74175 36423630
    800795 8eug:M (2.8) BS01 rna ? GO:0002181 ... O94238 36423630
    800796 8eug:N (2.8) BS01 rna ? GO:0002181 ... O74895 36423630
    800797 8eug:N (2.8) BS02 rna ? GO:0002181 ... O74895 36423630
    800798 8eug:O (2.8) BS01 rna ? GO:0002181 ... O42991 36423630
    800799 8eug:P (2.8) BS01 rna ? GO:0002181 ... O14339 36423630
    800800 8eug:P (2.8) BS02 rna ? GO:0002181 ... O14339 36423630

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).