SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    801001 8f7z:C (2.7) BS01 peptide N/A N/A N/A 37989731
    801002 8f7z:D (2.7) BS01 peptide N/A N/A N/A 37989731
    801003 8f7z:E (2.7) BS01 peptide N/A N/A N/A 37989731
    801004 8f7z:F (2.7) BS01 peptide N/A N/A N/A 37989731
    801005 8f7z:G (2.7) BS01 peptide N/A N/A N/A 37989731
    801006 8f7z:H (2.7) BS01 peptide N/A N/A N/A 37989731
    801007 8f80:A (1.1) BS01 NAP 1.5.1.3 GO:0000166 ... A0PQG8 39468773
    801008 8f80:A (1.1) BS02 XJB 1.5.1.3 GO:0000166 ... A0PQG8 39468773
    801009 8f81:A (1.3) BS01 NAP 1.5.1.3 GO:0000166 ... A0PQG8 39468773
    801010 8f81:A (1.3) BS02 XJN 1.5.1.3 GO:0000166 ... A0PQG8 39468773
    801011 8f82:A (1.2) BS01 XJT 1.5.1.3 GO:0000166 ... A0PQG8 39468773
    801012 8f82:A (1.2) BS02 NAP 1.5.1.3 GO:0000166 ... A0PQG8 39468773
    801013 8f83:A (1.32) BS01 NAP 1.5.1.3 GO:0000166 ... A0PQG8 39468773
    801014 8f83:A (1.32) BS02 XJZ 1.5.1.3 GO:0000166 ... A0PQG8 39468773
    801015 8f84:A (1.1) BS01 NAP 1.5.1.3 GO:0000166 ... A0PQG8 39468773
    801016 8f84:A (1.1) BS02 XK8 1.5.1.3 GO:0000166 ... A0PQG8 39468773
    801017 8f85:A (1.15) BS01 NAP 1.5.1.3 GO:0000166 ... A0PQG8 39468773
    801018 8f85:A (1.15) BS02 XKI 1.5.1.3 GO:0000166 ... A0PQG8 39468773
    801019 8f86:A (3.1) BS01 dna ? GO:0000786 ... P84233 36930461
    801020 8f86:A (3.1) BS02 dna ? GO:0000786 ... P84233 36930461
    801021 8f86:B (3.1) BS01 dna ? GO:0000786 ... P62799 36930461
    801022 8f86:B (3.1) BS02 dna ? GO:0000786 ... P62799 36930461
    801023 8f86:C (3.1) BS01 dna ? GO:0000786 ... P06897 36930461
    801024 8f86:C (3.1) BS02 dna ? GO:0000786 ... P06897 36930461
    801025 8f86:D (3.1) BS01 dna ? GO:0000786 ... P02281 36930461
    801026 8f86:D (3.1) BS02 dna ? GO:0000786 ... P02281 36930461
    801027 8f86:E (3.1) BS01 dna ? GO:0000786 ... P84233 36930461
    801028 8f86:E (3.1) BS02 dna ? GO:0000786 ... P84233 36930461
    801029 8f86:F (3.1) BS01 dna ? GO:0000786 ... P62799 36930461
    801030 8f86:F (3.1) BS02 dna ? GO:0000786 ... P62799 36930461
    801031 8f86:G (3.1) BS01 dna ? GO:0000786 ... P06897 36930461
    801032 8f86:G (3.1) BS02 dna ? GO:0000786 ... P06897 36930461
    801033 8f86:H (3.1) BS01 dna ? GO:0000786 ... P02281 36930461
    801034 8f86:H (3.1) BS02 dna ? GO:0000786 ... P02281 36930461
    801035 8f86:K (3.1) BS01 ZSL 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0000122 ... Q8N6T7 36930461
    801036 8f86:K (3.1) BS02 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0000122 ... Q8N6T7 36930461
    801037 8f87:A (2.6) BS01 XJ5 ? N/A Q05320 N/A
    801038 8f87:B (2.6) BS01 XJ5 ? N/A Q05320 N/A
    801039 8f88:A (3.1) BS01 peptide 3.1.3.48 GO:0004725 ... P18031 37316570
    801040 8f88:B (3.1) BS01 peptide 3.1.3.48 GO:0004725 ... P18031 37316570
    801041 8f88:C (3.1) BS01 peptide 3.1.3.48 GO:0004725 ... P18031 37316570
    801042 8f8e:A (1.55) BS01 XJI 2.7.11.1 GO:0016567 ... Q9Y4B6 N/A
    801043 8f8e:B (1.55) BS01 XJI 2.7.11.1 GO:0016567 ... Q9Y4B6 N/A
    801044 8f8k:A (2.2) BS01 IPE 2.5.1.1
    2.5.1.10
    GO:0004161 ... O53507 N/A
    801045 8f8k:A (2.2) BS02 CA 2.5.1.1
    2.5.1.10
    GO:0004161 ... O53507 N/A
    801046 8f8k:A (2.2) BS03 CA 2.5.1.1
    2.5.1.10
    GO:0004161 ... O53507 N/A
    801047 8f8l:A (2.2) BS01 DMA 2.5.1.1
    2.5.1.10
    GO:0004161 ... O53507 N/A
    801048 8f8l:A (2.2) BS02 CA 2.5.1.1
    2.5.1.10
    GO:0004161 ... O53507 N/A
    801049 8f8l:A (2.2) BS03 CA 2.5.1.1
    2.5.1.10
    GO:0004161 ... O53507 N/A
    801050 8f8m:A (2.6) BS01 peptide ? GO:0003677 ... O00482 N/A
    801051 8f8m:A (2.6) BS02 XKE ? GO:0003677 ... O00482 N/A
    801052 8f8o:A (2.1) BS01 ZN 3.5.1.18 GO:0006526 ... A3M8H2 N/A
    801053 8f8o:A (2.1) BS02 ZN 3.5.1.18 GO:0006526 ... A3M8H2 N/A
    801054 8f8o:B (2.1) BS01 ZN 3.5.1.18 GO:0006526 ... A3M8H2 N/A
    801055 8f8o:B (2.1) BS02 ZN 3.5.1.18 GO:0006526 ... A3M8H2 N/A
    801056 8f8p:A (2.26) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801057 8f8p:B (2.26) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801058 8f8p:C (2.26) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801059 8f8p:D (2.26) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801060 8f8p:E (2.26) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801061 8f8q:A (2.79) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801062 8f8q:B (2.79) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801063 8f8q:C (2.79) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801064 8f8q:D (2.79) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801065 8f8q:E (2.79) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801066 8f8q:F (2.79) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801067 8f8r:A (3.3) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801068 8f8r:B (3.3) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801069 8f8r:C (3.3) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801070 8f8r:D (3.3) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801071 8f8r:E (3.3) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801072 8f8r:F (3.3) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801073 8f8r:G (3.3) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801074 8f8s:A (2.84) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801075 8f8s:B (2.84) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801076 8f8s:C (2.84) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801077 8f8s:D (2.84) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801078 8f8s:E (2.84) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801079 8f8s:F (2.84) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801080 8f8s:G (2.84) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801081 8f8t:A (3.26) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801082 8f8t:B (3.26) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801083 8f8t:C (3.26) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801084 8f8t:D (3.26) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801085 8f8t:E (3.26) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801086 8f8t:F (3.26) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801087 8f8t:G (3.26) BS01 ADP 3.6.4.- GO:0000287 ... P68135 37228182
    801088 8f8w:A (2.71) BS01 BMA ? N/A Q6MZV7 37202422
    801089 8f8x:A (2.6) BS01 BMA ? N/A Q6MZV7 37202422
    801090 8f8x:B (2.6) BS01 BMA ? N/A Q6MZV7 37202422
    801091 8f8y:A (3.06) BS01 peptide 1.14.11.- N/A O75151 36596360
    801092 8f8y:A (3.06) BS02 ZN 1.14.11.- N/A O75151 36596360
    801093 8f8y:A (3.06) BS03 ZN 1.14.11.- N/A O75151 36596360
    801094 8f8y:B (3.06) BS01 peptide 1.14.11.- N/A O75151 36596360
    801095 8f8y:B (3.06) BS02 ZN 1.14.11.- N/A O75151 36596360
    801096 8f8y:B (3.06) BS03 ZN 1.14.11.- N/A O75151 36596360
    801097 8f8z:A (3.3) BS01 peptide 1.14.11.- N/A O75151 36596360
    801098 8f8z:A (3.3) BS02 ZN 1.14.11.- N/A O75151 36596360
    801099 8f8z:A (3.3) BS03 ZN 1.14.11.- N/A O75151 36596360
    801100 8f8z:B (3.3) BS01 peptide 1.14.11.- N/A O75151 36596360
    801101 8f8z:B (3.3) BS02 ZN 1.14.11.- N/A O75151 36596360
    801102 8f8z:B (3.3) BS03 ZN 1.14.11.- N/A O75151 36596360
    801103 8f90:A (1.6) BS01 MG N/A N/A A0A6N7UZI9 N/A
    801104 8f90:B (1.6) BS01 MG N/A N/A A0A6N7UZI9 N/A
    801105 8f90:C (1.6) BS01 MG N/A N/A A0A6N7UZI9 N/A
    801106 8f90:D (1.6) BS01 MG N/A N/A A0A6N7UZI9 N/A
    801107 8f91:A (2.8) BS01 HEM ? GO:0004497 ... A0A385L3H2 37405871
    801108 8f93:A (2.3) BS01 XKN ? GO:0000122 ... P61964 37460812
    801109 8f93:A (2.3) BS02 XKN ? GO:0000122 ... P61964 37460812
    801110 8f93:B (2.3) BS01 XKN ? GO:0000122 ... P61964 37460812
    801111 8f93:B (2.3) BS02 XKN ? GO:0000122 ... P61964 37460812
    801112 8f95:A (2.45) BS01 peptide N/A N/A N/A 38007690
    801113 8f95:B (2.45) BS01 peptide N/A N/A N/A 38007690
    801114 8f95:H (2.45) BS01 peptide N/A N/A N/A 38007690
    801115 8f95:L (2.45) BS01 peptide N/A N/A N/A 38007690
    801116 8f96:A (2.95) BS01 XLW 3.4.22.59 GO:0002218 ... P55212 37406165
    801117 8f96:B (2.95) BS01 XLW 3.4.22.59 GO:0002218 ... P55212 37406165
    801118 8f96:C (2.95) BS01 XLW 3.4.22.59 GO:0002218 ... P55212 37406165
    801119 8f96:D (2.95) BS01 XLW 3.4.22.59 GO:0002218 ... P55212 37406165
    801120 8f97:A (2.32) BS01 XM6 3.4.22.59 GO:0002218 ... P55212 37406165
    801121 8f97:C (2.32) BS01 XM6 3.4.22.59 GO:0002218 ... P55212 37406165
    801122 8f97:D (2.32) BS01 XM6 3.4.22.59 GO:0002218 ... P55212 37406165
    801123 8f98:A (2.7) BS01 XML 3.4.22.59 GO:0002218 ... P55212 37406165
    801124 8f98:B (2.7) BS01 XML 3.4.22.59 GO:0002218 ... P55212 37406165
    801125 8f98:D (2.7) BS01 XML 3.4.22.59 GO:0002218 ... P55212 37406165
    801126 8f99:A (2.86) BS01 XMR 3.4.22.59 GO:0002218 ... P55212 37406165
    801127 8f99:B (2.86) BS01 XMR 3.4.22.59 GO:0002218 ... P55212 37406165
    801128 8f99:C (2.86) BS01 XMR 3.4.22.59 GO:0002218 ... P55212 37406165
    801129 8f99:D (2.86) BS01 XMR 3.4.22.59 GO:0002218 ... P55212 37406165
    801130 8f9a:B (2.55) BS01 XMX 3.4.22.59 GO:0002218 ... P55212 37406165
    801131 8f9a:C (2.55) BS01 XMX 3.4.22.59 GO:0002218 ... P55212 37406165
    801132 8f9a:D (2.55) BS01 XMX 3.4.22.59 GO:0002218 ... P55212 37406165
    801133 8f9b:A (2.65) BS01 XN5 3.4.22.59 GO:0002218 ... P55212 37406165
    801134 8f9b:B (2.65) BS01 XN5 3.4.22.59 GO:0002218 ... P55212 37406165
    801135 8f9b:C (2.65) BS01 XN5 3.4.22.59 GO:0002218 ... P55212 37406165
    801136 8f9b:D (2.65) BS01 XN5 3.4.22.59 GO:0002218 ... P55212 37406165
    801137 8f9c:A (2.8) BS01 XN9 3.4.22.59 GO:0002218 ... P55212 37406165
    801138 8f9c:B (2.8) BS01 XN9 3.4.22.59 GO:0002218 ... P55212 37406165
    801139 8f9c:C (2.8) BS01 XN9 3.4.22.59 GO:0002218 ... P55212 37406165
    801140 8f9c:D (2.8) BS01 XN9 3.4.22.59 GO:0002218 ... P55212 37406165
    801141 8f9d:A (2.65) BS01 XNK 3.4.22.59 GO:0002218 ... P55212 37406165
    801142 8f9d:B (2.65) BS01 XNK 3.4.22.59 GO:0002218 ... P55212 37406165
    801143 8f9d:C (2.65) BS01 XNK 3.4.22.59 GO:0002218 ... P55212 37406165
    801144 8f9d:D (2.65) BS01 XNK 3.4.22.59 GO:0002218 ... P55212 37406165
    801145 8f9e:A (2.95) BS01 peptide N/A N/A N/A 38007690
    801146 8f9e:B (2.95) BS01 peptide N/A N/A N/A 38007690
    801147 8f9e:H (2.95) BS01 peptide N/A N/A N/A 38007690
    801148 8f9e:L (2.95) BS01 peptide N/A N/A N/A 38007690
    801149 8f9f:A (2.2) BS01 peptide N/A N/A N/A 38007690
    801150 8f9f:B (2.2) BS01 peptide N/A N/A N/A 38007690
    801151 8f9f:H (2.2) BS01 peptide N/A N/A N/A 38007690
    801152 8f9f:L (2.2) BS01 peptide N/A N/A N/A 38007690
    801153 8f9h:A (1.75) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    801154 8f9h:A (1.75) BS02 NSM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    801155 8f9i:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    801156 8f9i:A (1.8) BS02 NOE 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    801157 8f9i:B (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    801158 8f9j:A (1.75) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    801159 8f9j:A (1.75) BS02 XEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    801160 8f9n:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    801161 8f9n:A (1.8) BS02 XEP 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    801162 8f9p:A (1.55) BS01 ACT ? GO:0001681 ... A0A8C0T2R3 39321866
    801163 8f9s:A (2.1) BS01 peptide N/A N/A N/A 38007690
    801164 8f9s:B (2.1) BS01 peptide N/A N/A N/A 38007690
    801165 8f9s:H (2.1) BS01 peptide N/A N/A N/A 38007690
    801166 8f9s:L (2.1) BS01 peptide N/A N/A N/A 38007690
    801167 8f9t:A (1.85) BS01 peptide N/A N/A N/A 38007690
    801168 8f9t:B (1.85) BS01 peptide N/A N/A N/A 38007690
    801169 8f9t:H (1.85) BS01 peptide N/A N/A N/A 38007690
    801170 8f9t:L (1.85) BS01 peptide N/A N/A N/A 38007690
    801171 8f9u:A (1.7) BS01 peptide N/A N/A N/A 38007690
    801172 8f9u:B (1.7) BS01 peptide N/A N/A N/A 38007690
    801173 8f9v:A (2.25) BS01 peptide N/A N/A N/A 38007690
    801174 8f9v:B (2.25) BS01 peptide N/A N/A N/A 38007690
    801175 8f9v:C (2.25) BS01 peptide N/A N/A N/A 38007690
    801176 8f9v:D (2.25) BS01 peptide N/A N/A N/A 38007690
    801177 8f9v:E (2.25) BS01 peptide N/A N/A N/A 38007690
    801178 8f9v:F (2.25) BS01 peptide N/A N/A N/A 38007690
    801179 8f9v:G (2.25) BS01 peptide N/A N/A N/A 38007690
    801180 8f9v:H (2.25) BS01 peptide N/A N/A N/A 38007690
    801181 8f9w:A (2.4) BS01 peptide N/A N/A N/A 38007690
    801182 8f9w:B (2.4) BS01 peptide N/A N/A N/A 38007690
    801183 8f9w:C (2.4) BS01 peptide N/A N/A N/A 38007690
    801184 8f9w:D (2.4) BS01 peptide N/A N/A N/A 38007690
    801185 8f9w:E (2.4) BS01 peptide N/A N/A N/A 38007690
    801186 8f9w:F (2.4) BS01 peptide N/A N/A N/A 38007690
    801187 8f9w:G (2.4) BS01 peptide N/A N/A N/A 38007690
    801188 8f9w:H (2.4) BS01 peptide N/A N/A N/A 38007690
    801189 8f9x:A (2.32) BS01 ZN ? GO:0004061 ... Q5LVE1 N/A
    801190 8f9x:A (2.32) BS02 ZN ? GO:0004061 ... Q5LVE1 N/A
    801191 8f9x:A (2.32) BS03 ZN ? GO:0004061 ... Q5LVE1 N/A
    801192 8f9x:B (2.32) BS01 ZN ? GO:0004061 ... Q5LVE1 N/A
    801193 8f9x:B (2.32) BS02 ZN ? GO:0004061 ... Q5LVE1 N/A
    801194 8f9x:B (2.32) BS03 ZN ? GO:0004061 ... Q5LVE1 N/A
    801195 8f9x:C (2.32) BS01 ZN ? GO:0004061 ... Q5LVE1 N/A
    801196 8f9x:C (2.32) BS02 ZN ? GO:0004061 ... Q5LVE1 N/A
    801197 8f9x:C (2.32) BS03 ZN ? GO:0004061 ... Q5LVE1 N/A
    801198 8f9x:D (2.32) BS01 ZN ? GO:0004061 ... Q5LVE1 N/A
    801199 8f9x:D (2.32) BS02 ZN ? GO:0004061 ... Q5LVE1 N/A
    801200 8f9x:D (2.32) BS03 ZN ? GO:0004061 ... Q5LVE1 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).