SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    801001 8euy:e (3.0) BS01 rna ? GO:0002181 ... P79015 36423630
    801002 8euy:f (3.0) BS01 rna ? GO:0002181 ... Q9USG6 36423630
    801003 8euy:h (3.0) BS01 rna ? GO:0000463 ... O74904 36423630
    801004 8euy:h (3.0) BS02 rna ? GO:0000463 ... O74904 36423630
    801005 8euy:i (3.0) BS01 rna ? GO:0002181 ... O94658 36423630
    801006 8euy:j (3.0) BS01 rna ? GO:0000448 ... P05733 36423630
    801007 8euy:j (3.0) BS02 rna ? GO:0000448 ... P05733 36423630
    801008 8euy:j (3.0) BS03 ZN ? GO:0000448 ... P05733 36423630
    801009 8euy:m (3.0) BS01 rna ? GO:0000463 ... O74399 36423630
    801010 8euy:o (3.0) BS01 rna ? GO:0003676 ... O74978 36423630
    801011 8euy:o (3.0) BS02 peptide ? GO:0003676 ... O74978 36423630
    801012 8euy:r (3.0) BS01 rna ? GO:0000460 ... Q9UU79 36423630
    801013 8euy:v (3.0) BS01 rna ? GO:0003674 ... Q9Y7Z1 36423630
    801014 8euy:v (3.0) BS02 rna ? GO:0003674 ... Q9Y7Z1 36423630
    801015 8euy:x (3.0) BS01 rna ? GO:0000460 ... O14180 36423630
    801016 8euy:x (3.0) BS02 rna ? GO:0000460 ... O14180 36423630
    801017 8euy:y (3.0) BS01 rna ? GO:0000054 ... O94476 36423630
    801018 8ev1:A (1.83) BS01 peptide ? N/A P03372 36516582
    801019 8ev1:A (1.83) BS02 WVW ? N/A P03372 36516582
    801020 8ev1:A (1.83) BS03 WVR ? N/A P03372 36516582
    801021 8ev1:B (1.83) BS01 peptide ? N/A P03372 36516582
    801022 8ev1:B (1.83) BS02 WVW ? N/A P03372 36516582
    801023 8ev2:A (2.01) BS01 peptide ? N/A P03372 36516582
    801024 8ev2:A (2.01) BS02 LYQ ? N/A P03372 36516582
    801025 8ev2:A (2.01) BS03 LYQ ? N/A P03372 36516582
    801026 8ev2:A (2.01) BS04 WVE ? N/A P03372 36516582
    801027 8ev2:A (2.01) BS05 WVE ? N/A P03372 36516582
    801028 8ev2:B (2.01) BS01 peptide ? N/A P03372 36516582
    801029 8ev2:B (2.01) BS02 LYQ ? N/A P03372 36516582
    801030 8ev2:B (2.01) BS03 LYQ ? N/A P03372 36516582
    801031 8ev2:B (2.01) BS04 WVE ? N/A P03372 36516582
    801032 8ev2:B (2.01) BS05 WVE ? N/A P03372 36516582
    801033 8ev3:3 (3.0) BS01 rna ? GO:0000460 ... Q9UTE6 36423630
    801034 8ev3:4 (3.0) BS01 rna ? GO:0003674 ... Q9Y7M6 36423630
    801035 8ev3:5 (3.0) BS01 rna ? GO:0003674 ... O94698 36423630
    801036 8ev3:A (3.0) BS01 rna ? GO:0000027 ... Q9HGL6 36423630
    801037 8ev3:B (3.0) BS01 rna ? GO:0002181 ... P40372 36423630
    801038 8ev3:C (3.0) BS01 rna ? GO:0002181 ... Q9P784 36423630
    801039 8ev3:C (3.0) BS02 rna ? GO:0002181 ... Q9P784 36423630
    801040 8ev3:D (3.0) BS01 rna 3.6.4.13 GO:0000463 ... Q09916 36423630
    801041 8ev3:E (3.0) BS01 rna ? GO:0002181 ... P79071 36423630
    801042 8ev3:F (3.0) BS01 rna ? GO:0000463 ... P25457 36423630
    801043 8ev3:F (3.0) BS02 peptide ? GO:0000463 ... P25457 36423630
    801044 8ev3:G (3.0) BS01 rna ? GO:0000470 ... O13672 36423630
    801045 8ev3:G (3.0) BS02 rna ? GO:0000470 ... O13672 36423630
    801046 8ev3:G (3.0) BS03 rna ? GO:0000470 ... O13672 36423630
    801047 8ev3:H (3.0) BS01 rna ? GO:0002181 ... Q10232 36423630
    801048 8ev3:K (3.0) BS01 rna ? GO:0003723 ... Q9UT32 36423630
    801049 8ev3:L (3.0) BS01 rna ? GO:0002181 ... O74175 36423630
    801050 8ev3:L (3.0) BS02 rna ? GO:0002181 ... O74175 36423630
    801051 8ev3:M (3.0) BS01 rna ? GO:0002181 ... O94238 36423630
    801052 8ev3:N (3.0) BS01 rna ? GO:0002181 ... O74895 36423630
    801053 8ev3:N (3.0) BS02 rna ? GO:0002181 ... O74895 36423630
    801054 8ev3:O (3.0) BS01 rna ? GO:0002181 ... O42991 36423630
    801055 8ev3:P (3.0) BS01 rna ? GO:0002181 ... O14339 36423630
    801056 8ev3:P (3.0) BS02 rna ? GO:0002181 ... O14339 36423630
    801057 8ev3:Q (3.0) BS01 rna ? GO:0002181 ... Q10192 36423630
    801058 8ev3:S (3.0) BS01 rna ? GO:0002181 ... P0CT68 36423630
    801059 8ev3:S (3.0) BS02 peptide ? GO:0002181 ... P0CT68 36423630
    801060 8ev3:Y (3.0) BS01 rna ? GO:0002181 ... P78946 36423630
    801061 8ev3:Y (3.0) BS02 rna ? GO:0002181 ... P78946 36423630
    801062 8ev3:e (3.0) BS01 rna ? GO:0002181 ... P79015 36423630
    801063 8ev3:f (3.0) BS01 rna ? GO:0002181 ... Q9USG6 36423630
    801064 8ev3:h (3.0) BS01 rna ? GO:0000463 ... O74904 36423630
    801065 8ev3:h (3.0) BS02 rna ? GO:0000463 ... O74904 36423630
    801066 8ev3:i (3.0) BS01 rna ? GO:0002181 ... O94658 36423630
    801067 8ev3:j (3.0) BS01 rna ? GO:0000448 ... P05733 36423630
    801068 8ev3:j (3.0) BS02 rna ? GO:0000448 ... P05733 36423630
    801069 8ev3:j (3.0) BS03 ZN ? GO:0000448 ... P05733 36423630
    801070 8ev3:m (3.0) BS01 rna ? GO:0000463 ... O74399 36423630
    801071 8ev3:n (3.0) BS01 rna ? GO:0000463 ... O60164 36423630
    801072 8ev3:o (3.0) BS01 rna ? GO:0003676 ... O74978 36423630
    801073 8ev3:r (3.0) BS01 rna ? GO:0000460 ... Q9UU79 36423630
    801074 8ev3:t (3.0) BS01 rna ? GO:0000463 ... P17937 36423630
    801075 8ev3:t (3.0) BS02 rna ? GO:0000463 ... P17937 36423630
    801076 8ev3:v (3.0) BS01 rna ? GO:0003674 ... Q9Y7Z1 36423630
    801077 8ev3:v (3.0) BS02 rna ? GO:0003674 ... Q9Y7Z1 36423630
    801078 8ev3:x (3.0) BS01 rna ? GO:0000460 ... O14180 36423630
    801079 8ev3:x (3.0) BS02 rna ? GO:0000460 ... O14180 36423630
    801080 8ev5:A (1.65) BS01 E64 ? N/A A2FQ38 37585473
    801081 8ev6:10 (2.946) BS01 rna ? GO:0003735 ... P60493 37537169
    801082 8ev6:10 (2.946) BS02 rna ? GO:0003735 ... P60493 37537169
    801083 8ev6:11 (2.946) BS01 rna ? GO:0003735 ... P60494 37537169
    801084 8ev6:12 (2.946) BS01 rna ? GO:0003735 ... Q5SHP6 37537169
    801085 8ev6:13 (2.946) BS01 rna ? GO:0003735 ... Q5SHQ6 37537169
    801086 8ev6:13 (2.946) BS02 rna ? GO:0003735 ... Q5SHQ6 37537169
    801087 8ev6:14 (2.946) BS01 rna ? GO:0003735 ... Q5SJE1 37537169
    801088 8ev6:14 (2.946) BS02 ZN ? GO:0003735 ... Q5SJE1 37537169
    801089 8ev6:15 (2.946) BS01 rna ? GO:0003735 ... P80339 37537169
    801090 8ev6:15 (2.946) BS02 ZN ? GO:0003735 ... P80339 37537169
    801091 8ev6:16 (2.946) BS01 rna ? GO:0003735 ... P35871 37537169
    801092 8ev6:16 (2.946) BS02 ZN ? GO:0003735 ... P35871 37537169
    801093 8ev6:17 (2.946) BS01 rna ? GO:0003735 ... P80340 37537169
    801094 8ev6:18 (2.946) BS01 rna ? GO:0003735 ... Q5SKU1 37537169
    801095 8ev6:18 (2.946) BS02 MG ? GO:0003735 ... Q5SKU1 37537169
    801096 8ev6:18 (2.946) BS03 MG ? GO:0003735 ... Q5SKU1 37537169
    801097 8ev6:18 (2.946) BS04 MG ? GO:0003735 ... Q5SKU1 37537169
    801098 8ev6:19 (2.946) BS01 rna ? GO:0003735 ... Q5SHR2 37537169
    801099 8ev6:19 (2.946) BS02 ZN ? GO:0003735 ... Q5SHR2 37537169
    801100 8ev6:1D (2.946) BS01 rna ? GO:0002181 ... P60405 37537169
    801101 8ev6:1D (2.946) BS02 rna ? GO:0002181 ... P60405 37537169
    801102 8ev6:1D (2.946) BS03 MG ? GO:0002181 ... P60405 37537169
    801103 8ev6:1D (2.946) BS04 MG ? GO:0002181 ... P60405 37537169
    801104 8ev6:1D (2.946) BS05 MG ? GO:0002181 ... P60405 37537169
    801105 8ev6:1D (2.946) BS06 MG ? GO:0002181 ... P60405 37537169
    801106 8ev6:1E (2.946) BS01 rna ? GO:0003735 ... Q5SHN8 37537169
    801107 8ev6:1E (2.946) BS02 MG ? GO:0003735 ... Q5SHN8 37537169
    801108 8ev6:1E (2.946) BS03 MG ? GO:0003735 ... Q5SHN8 37537169
    801109 8ev6:1F (2.946) BS01 rna ? GO:0003735 ... Q5SHN9 37537169
    801110 8ev6:1F (2.946) BS02 MG ? GO:0003735 ... Q5SHN9 37537169
    801111 8ev6:1F (2.946) BS03 MG ? GO:0003735 ... Q5SHN9 37537169
    801112 8ev6:1F (2.946) BS04 MG ? GO:0003735 ... Q5SHN9 37537169
    801113 8ev6:1G (2.946) BS01 rna ? GO:0000049 ... Q5SHQ0 37537169
    801114 8ev6:1G (2.946) BS02 rna ? GO:0000049 ... Q5SHQ0 37537169
    801115 8ev6:1G (2.946) BS03 rna ? GO:0000049 ... Q5SHQ0 37537169
    801116 8ev6:1G (2.946) BS04 MG ? GO:0000049 ... Q5SHQ0 37537169
    801117 8ev6:1G (2.946) BS05 MG ? GO:0000049 ... Q5SHQ0 37537169
    801118 8ev6:1H (2.946) BS01 rna ? GO:0002181 ... P0DOY8 37537169
    801119 8ev6:1I (2.946) BS01 rna ? GO:0003735 ... Q5SLQ1 37537169
    801120 8ev6:1N (2.946) BS01 rna ? GO:0003729 ... P60488 37537169
    801121 8ev6:1N (2.946) BS02 MG ? GO:0003729 ... P60488 37537169
    801122 8ev6:1O (2.946) BS01 rna ? GO:0003735 ... Q5SHP8 37537169
    801123 8ev6:1O (2.946) BS02 rna ? GO:0003735 ... Q5SHP8 37537169
    801124 8ev6:1O (2.946) BS03 AKN ? GO:0003735 ... Q5SHP8 37537169
    801125 8ev6:1P (2.946) BS01 rna ? GO:0003735 ... Q5SHQ7 37537169
    801126 8ev6:1Q (2.946) BS01 rna ? GO:0003735 ... P60489 37537169
    801127 8ev6:1Q (2.946) BS02 rna ? GO:0003735 ... P60489 37537169
    801128 8ev6:1Q (2.946) BS03 rna ? GO:0003735 ... P60489 37537169
    801129 8ev6:1Q (2.946) BS04 MG ? GO:0003735 ... P60489 37537169
    801130 8ev6:1Q (2.946) BS05 MG ? GO:0003735 ... P60489 37537169
    801131 8ev6:1R (2.946) BS01 rna ? GO:0003735 ... Q9Z9H5 37537169
    801132 8ev6:1S (2.946) BS01 rna ? GO:0003735 ... Q5SHQ4 37537169
    801133 8ev6:1S (2.946) BS02 rna ? GO:0003735 ... Q5SHQ4 37537169
    801134 8ev6:1T (2.946) BS01 rna ? GO:0003735 ... P60490 37537169
    801135 8ev6:1T (2.946) BS02 rna ? GO:0003735 ... P60490 37537169
    801136 8ev6:1U (2.946) BS01 rna ? GO:0000027 ... P60491 37537169
    801137 8ev6:1U (2.946) BS02 MG ? GO:0000027 ... P60491 37537169
    801138 8ev6:1V (2.946) BS01 rna ? GO:0003723 ... P60492 37537169
    801139 8ev6:1V (2.946) BS02 MG ? GO:0003723 ... P60492 37537169
    801140 8ev6:1W (2.946) BS01 rna ? GO:0003735 ... Q5SHP3 37537169
    801141 8ev6:1W (2.946) BS02 MG ? GO:0003735 ... Q5SHP3 37537169
    801142 8ev6:1X (2.946) BS01 rna ? GO:0003735 ... Q5SHP0 37537169
    801143 8ev6:1Y (2.946) BS01 rna ? GO:0003723 ... Q5SHP9 37537169
    801144 8ev6:1Y (2.946) BS02 ZN ? GO:0003723 ... Q5SHP9 37537169
    801145 8ev6:1Z (2.946) BS01 rna ? GO:0003723 ... Q5SHZ1 37537169
    801146 8ev6:1Z (2.946) BS02 rna ? GO:0003723 ... Q5SHZ1 37537169
    801147 8ev6:1b (2.946) BS01 rna ? GO:0003735 ... P80371 37537169
    801148 8ev6:1c (2.946) BS01 rna ? GO:0003676 ... P80372 37537169
    801149 8ev6:1d (2.946) BS01 rna ? GO:0003723 ... P80373 37537169
    801150 8ev6:1d (2.946) BS02 MG ? GO:0003723 ... P80373 37537169
    801151 8ev6:1d (2.946) BS03 SF4 ? GO:0003723 ... P80373 37537169
    801152 8ev6:1e (2.946) BS01 rna ? GO:0003723 ... Q5SHQ5 37537169
    801153 8ev6:1e (2.946) BS02 MG ? GO:0003723 ... Q5SHQ5 37537169
    801154 8ev6:1f (2.946) BS01 rna ? GO:0003735 ... Q5SLP8 37537169
    801155 8ev6:1f (2.946) BS02 MG ? GO:0003735 ... Q5SLP8 37537169
    801156 8ev6:1f (2.946) BS03 MG ? GO:0003735 ... Q5SLP8 37537169
    801157 8ev6:1g (2.946) BS01 rna ? GO:0000049 ... P17291 37537169
    801158 8ev6:1g (2.946) BS02 rna ? GO:0000049 ... P17291 37537169
    801159 8ev6:1h (2.946) BS01 rna ? GO:0003735 ... P0DOY9 37537169
    801160 8ev6:1i (2.946) BS01 rna ? GO:0003723 ... P80374 37537169
    801161 8ev6:1i (2.946) BS02 rna ? GO:0003723 ... P80374 37537169
    801162 8ev6:1j (2.946) BS01 rna ? GO:0000049 ... Q5SHN7 37537169
    801163 8ev6:1k (2.946) BS01 rna ? GO:0003735 ... P80376 37537169
    801164 8ev6:1k (2.946) BS02 MG ? GO:0003735 ... P80376 37537169
    801165 8ev6:1l (2.946) BS01 rna ? GO:0000049 ... Q5SHN3 37537169
    801166 8ev6:1l (2.946) BS02 MG ? GO:0000049 ... Q5SHN3 37537169
    801167 8ev6:1l (2.946) BS03 MG ? GO:0000049 ... Q5SHN3 37537169
    801168 8ev6:1l (2.946) BS04 MG ? GO:0000049 ... Q5SHN3 37537169
    801169 8ev6:1m (2.946) BS01 rna ? GO:0000049 ... P80377 37537169
    801170 8ev6:1m (2.946) BS02 rna ? GO:0000049 ... P80377 37537169
    801171 8ev6:1m (2.946) BS03 rna ? GO:0000049 ... P80377 37537169
    801172 8ev6:1m (2.946) BS04 MG ? GO:0000049 ... P80377 37537169
    801173 8ev6:1n (2.946) BS01 rna ? GO:0003735 ... P0DOY6 37537169
    801174 8ev6:1n (2.946) BS02 ZN ? GO:0003735 ... P0DOY6 37537169
    801175 8ev6:1o (2.946) BS01 rna ? GO:0003735 ... Q5SJ76 37537169
    801176 8ev6:1o (2.946) BS02 rna ? GO:0003735 ... Q5SJ76 37537169
    801177 8ev6:1p (2.946) BS01 rna ? GO:0003735 ... Q5SJH3 37537169
    801178 8ev6:1p (2.946) BS02 MG ? GO:0003735 ... Q5SJH3 37537169
    801179 8ev6:1q (2.946) BS01 rna ? GO:0003735 ... P0DOY7 37537169
    801180 8ev6:1r (2.946) BS01 rna ? GO:0003735 ... Q5SLQ0 37537169
    801181 8ev6:1s (2.946) BS01 rna ? GO:0000028 ... Q5SHP2 37537169
    801182 8ev6:1t (2.946) BS01 rna ? GO:0003723 ... P80380 37537169
    801183 8ev6:20 (2.946) BS01 rna ? GO:0003735 ... P60493 37537169
    801184 8ev6:20 (2.946) BS02 rna ? GO:0003735 ... P60493 37537169
    801185 8ev6:20 (2.946) BS03 rna ? GO:0003735 ... P60493 37537169
    801186 8ev6:21 (2.946) BS01 rna ? GO:0003735 ... P60494 37537169
    801187 8ev6:21 (2.946) BS02 rna ? GO:0003735 ... P60494 37537169
    801188 8ev6:22 (2.946) BS01 rna ? GO:0003735 ... Q5SHP6 37537169
    801189 8ev6:23 (2.946) BS01 rna ? GO:0003735 ... Q5SHQ6 37537169
    801190 8ev6:23 (2.946) BS02 rna ? GO:0003735 ... Q5SHQ6 37537169
    801191 8ev6:24 (2.946) BS01 rna ? GO:0003735 ... Q5SJE1 37537169
    801192 8ev6:24 (2.946) BS02 ZN ? GO:0003735 ... Q5SJE1 37537169
    801193 8ev6:25 (2.946) BS01 rna ? GO:0003735 ... P80339 37537169
    801194 8ev6:25 (2.946) BS02 ZN ? GO:0003735 ... P80339 37537169
    801195 8ev6:26 (2.946) BS01 rna ? GO:0003735 ... P35871 37537169
    801196 8ev6:26 (2.946) BS02 ZN ? GO:0003735 ... P35871 37537169
    801197 8ev6:27 (2.946) BS01 rna ? GO:0003735 ... P80340 37537169
    801198 8ev6:28 (2.946) BS01 rna ? GO:0003735 ... Q5SKU1 37537169
    801199 8ev6:29 (2.946) BS01 rna ? GO:0003735 ... Q5SHR2 37537169
    801200 8ev6:29 (2.946) BS02 ZN ? GO:0003735 ... Q5SHR2 37537169

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).