SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    801201 8ev6:2D (2.946) BS01 rna ? GO:0002181 ... P60405 37537169
    801202 8ev6:2D (2.946) BS02 rna ? GO:0002181 ... P60405 37537169
    801203 8ev6:2D (2.946) BS03 MG ? GO:0002181 ... P60405 37537169
    801204 8ev6:2D (2.946) BS04 MG ? GO:0002181 ... P60405 37537169
    801205 8ev6:2D (2.946) BS05 MG ? GO:0002181 ... P60405 37537169
    801206 8ev6:2E (2.946) BS01 rna ? GO:0003735 ... Q5SHN8 37537169
    801207 8ev6:2E (2.946) BS02 MG ? GO:0003735 ... Q5SHN8 37537169
    801208 8ev6:2F (2.946) BS01 rna ? GO:0003735 ... Q5SHN9 37537169
    801209 8ev6:2F (2.946) BS02 MG ? GO:0003735 ... Q5SHN9 37537169
    801210 8ev6:2F (2.946) BS03 MG ? GO:0003735 ... Q5SHN9 37537169
    801211 8ev6:2F (2.946) BS04 MG ? GO:0003735 ... Q5SHN9 37537169
    801212 8ev6:2G (2.946) BS01 rna ? GO:0000049 ... Q5SHQ0 37537169
    801213 8ev6:2G (2.946) BS02 rna ? GO:0000049 ... Q5SHQ0 37537169
    801214 8ev6:2G (2.946) BS03 rna ? GO:0000049 ... Q5SHQ0 37537169
    801215 8ev6:2H (2.946) BS01 rna ? GO:0002181 ... P0DOY8 37537169
    801216 8ev6:2I (2.946) BS01 rna ? GO:0003735 ... Q5SLQ1 37537169
    801217 8ev6:2N (2.946) BS01 rna ? GO:0003729 ... P60488 37537169
    801218 8ev6:2O (2.946) BS01 rna ? GO:0003735 ... Q5SHP8 37537169
    801219 8ev6:2O (2.946) BS02 rna ? GO:0003735 ... Q5SHP8 37537169
    801220 8ev6:2O (2.946) BS03 MG ? GO:0003735 ... Q5SHP8 37537169
    801221 8ev6:2O (2.946) BS04 AKN ? GO:0003735 ... Q5SHP8 37537169
    801222 8ev6:2P (2.946) BS01 rna ? GO:0003735 ... Q5SHQ7 37537169
    801223 8ev6:2P (2.946) BS02 MG ? GO:0003735 ... Q5SHQ7 37537169
    801224 8ev6:2Q (2.946) BS01 rna ? GO:0003735 ... P60489 37537169
    801225 8ev6:2Q (2.946) BS02 rna ? GO:0003735 ... P60489 37537169
    801226 8ev6:2Q (2.946) BS03 rna ? GO:0003735 ... P60489 37537169
    801227 8ev6:2Q (2.946) BS04 MG ? GO:0003735 ... P60489 37537169
    801228 8ev6:2R (2.946) BS01 rna ? GO:0003735 ... Q9Z9H5 37537169
    801229 8ev6:2S (2.946) BS01 rna ? GO:0003735 ... Q5SHQ4 37537169
    801230 8ev6:2S (2.946) BS02 rna ? GO:0003735 ... Q5SHQ4 37537169
    801231 8ev6:2T (2.946) BS01 rna ? GO:0003735 ... P60490 37537169
    801232 8ev6:2T (2.946) BS02 rna ? GO:0003735 ... P60490 37537169
    801233 8ev6:2U (2.946) BS01 rna ? GO:0000027 ... P60491 37537169
    801234 8ev6:2V (2.946) BS01 rna ? GO:0003723 ... P60492 37537169
    801235 8ev6:2W (2.946) BS01 rna ? GO:0003735 ... Q5SHP3 37537169
    801236 8ev6:2W (2.946) BS02 MG ? GO:0003735 ... Q5SHP3 37537169
    801237 8ev6:2X (2.946) BS01 rna ? GO:0003735 ... Q5SHP0 37537169
    801238 8ev6:2Y (2.946) BS01 rna ? GO:0003723 ... Q5SHP9 37537169
    801239 8ev6:2Y (2.946) BS02 ZN ? GO:0003723 ... Q5SHP9 37537169
    801240 8ev6:2Z (2.946) BS01 rna ? GO:0003723 ... Q5SHZ1 37537169
    801241 8ev6:2Z (2.946) BS02 rna ? GO:0003723 ... Q5SHZ1 37537169
    801242 8ev6:2b (2.946) BS01 rna ? GO:0003735 ... P80371 37537169
    801243 8ev6:2c (2.946) BS01 rna ? GO:0003676 ... P80372 37537169
    801244 8ev6:2d (2.946) BS01 rna ? GO:0003723 ... P80373 37537169
    801245 8ev6:2d (2.946) BS02 SF4 ? GO:0003723 ... P80373 37537169
    801246 8ev6:2e (2.946) BS01 rna ? GO:0003723 ... Q5SHQ5 37537169
    801247 8ev6:2e (2.946) BS02 MG ? GO:0003723 ... Q5SHQ5 37537169
    801248 8ev6:2f (2.946) BS01 rna ? GO:0003735 ... Q5SLP8 37537169
    801249 8ev6:2g (2.946) BS01 rna ? GO:0000049 ... P17291 37537169
    801250 8ev6:2g (2.946) BS02 rna ? GO:0000049 ... P17291 37537169
    801251 8ev6:2g (2.946) BS03 MG ? GO:0000049 ... P17291 37537169
    801252 8ev6:2h (2.946) BS01 rna ? GO:0003735 ... P0DOY9 37537169
    801253 8ev6:2i (2.946) BS01 rna ? GO:0003723 ... P80374 37537169
    801254 8ev6:2i (2.946) BS02 rna ? GO:0003723 ... P80374 37537169
    801255 8ev6:2j (2.946) BS01 rna ? GO:0000049 ... Q5SHN7 37537169
    801256 8ev6:2k (2.946) BS01 rna ? GO:0003735 ... P80376 37537169
    801257 8ev6:2l (2.946) BS01 rna ? GO:0000049 ... Q5SHN3 37537169
    801258 8ev6:2l (2.946) BS02 rna ? GO:0000049 ... Q5SHN3 37537169
    801259 8ev6:2m (2.946) BS01 rna ? GO:0000049 ... P80377 37537169
    801260 8ev6:2n (2.946) BS01 rna ? GO:0003735 ... P0DOY6 37537169
    801261 8ev6:2n (2.946) BS02 ZN ? GO:0003735 ... P0DOY6 37537169
    801262 8ev6:2o (2.946) BS01 rna ? GO:0003735 ... Q5SJ76 37537169
    801263 8ev6:2o (2.946) BS02 rna ? GO:0003735 ... Q5SJ76 37537169
    801264 8ev6:2p (2.946) BS01 rna ? GO:0003735 ... Q5SJH3 37537169
    801265 8ev6:2q (2.946) BS01 rna ? GO:0003735 ... P0DOY7 37537169
    801266 8ev6:2r (2.946) BS01 rna ? GO:0003735 ... Q5SLQ0 37537169
    801267 8ev6:2s (2.946) BS01 rna ? GO:0000028 ... Q5SHP2 37537169
    801268 8ev6:2t (2.946) BS01 rna ? GO:0003723 ... P80380 37537169
    801269 8ev6:2t (2.946) BS02 MG ? GO:0003723 ... P80380 37537169
    801270 8ev7:10 (2.89) BS01 rna ? GO:0003735 ... P60493 37537169
    801271 8ev7:10 (2.89) BS02 rna ? GO:0003735 ... P60493 37537169
    801272 8ev7:11 (2.89) BS01 rna ? GO:0003735 ... P60494 37537169
    801273 8ev7:11 (2.89) BS02 rna ? GO:0003735 ... P60494 37537169
    801274 8ev7:12 (2.89) BS01 rna ? GO:0003735 ... Q5SHP6 37537169
    801275 8ev7:13 (2.89) BS01 rna ? GO:0003735 ... Q5SHQ6 37537169
    801276 8ev7:13 (2.89) BS02 rna ? GO:0003735 ... Q5SHQ6 37537169
    801277 8ev7:14 (2.89) BS01 rna ? GO:0003735 ... Q5SJE1 37537169
    801278 8ev7:14 (2.89) BS02 ZN ? GO:0003735 ... Q5SJE1 37537169
    801279 8ev7:15 (2.89) BS01 rna ? GO:0003735 ... P80339 37537169
    801280 8ev7:15 (2.89) BS02 ZN ? GO:0003735 ... P80339 37537169
    801281 8ev7:16 (2.89) BS01 rna ? GO:0003735 ... P35871 37537169
    801282 8ev7:16 (2.89) BS02 ZN ? GO:0003735 ... P35871 37537169
    801283 8ev7:17 (2.89) BS01 rna ? GO:0003735 ... P80340 37537169
    801284 8ev7:18 (2.89) BS01 rna ? GO:0003735 ... Q5SKU1 37537169
    801285 8ev7:18 (2.89) BS02 MG ? GO:0003735 ... Q5SKU1 37537169
    801286 8ev7:19 (2.89) BS01 rna ? GO:0003735 ... Q5SHR2 37537169
    801287 8ev7:19 (2.89) BS02 MG ? GO:0003735 ... Q5SHR2 37537169
    801288 8ev7:19 (2.89) BS03 ZN ? GO:0003735 ... Q5SHR2 37537169
    801289 8ev7:1D (2.89) BS01 rna ? GO:0002181 ... P60405 37537169
    801290 8ev7:1D (2.89) BS02 rna ? GO:0002181 ... P60405 37537169
    801291 8ev7:1D (2.89) BS03 MG ? GO:0002181 ... P60405 37537169
    801292 8ev7:1D (2.89) BS04 MG ? GO:0002181 ... P60405 37537169
    801293 8ev7:1D (2.89) BS05 MG ? GO:0002181 ... P60405 37537169
    801294 8ev7:1E (2.89) BS01 rna ? GO:0003735 ... Q5SHN8 37537169
    801295 8ev7:1E (2.89) BS02 MG ? GO:0003735 ... Q5SHN8 37537169
    801296 8ev7:1F (2.89) BS01 rna ? GO:0003735 ... Q5SHN9 37537169
    801297 8ev7:1G (2.89) BS01 rna ? GO:0000049 ... Q5SHQ0 37537169
    801298 8ev7:1G (2.89) BS02 rna ? GO:0000049 ... Q5SHQ0 37537169
    801299 8ev7:1G (2.89) BS03 rna ? GO:0000049 ... Q5SHQ0 37537169
    801300 8ev7:1G (2.89) BS04 MG ? GO:0000049 ... Q5SHQ0 37537169
    801301 8ev7:1G (2.89) BS05 MG ? GO:0000049 ... Q5SHQ0 37537169
    801302 8ev7:1H (2.89) BS01 rna ? GO:0002181 ... P0DOY8 37537169
    801303 8ev7:1I (2.89) BS01 rna ? GO:0003735 ... Q5SLQ1 37537169
    801304 8ev7:1N (2.89) BS01 rna ? GO:0003729 ... P60488 37537169
    801305 8ev7:1O (2.89) BS01 rna ? GO:0003735 ... Q5SHP8 37537169
    801306 8ev7:1O (2.89) BS02 rna ? GO:0003735 ... Q5SHP8 37537169
    801307 8ev7:1P (2.89) BS01 rna ? GO:0003735 ... Q5SHQ7 37537169
    801308 8ev7:1Q (2.89) BS01 rna ? GO:0003735 ... P60489 37537169
    801309 8ev7:1Q (2.89) BS02 rna ? GO:0003735 ... P60489 37537169
    801310 8ev7:1Q (2.89) BS03 rna ? GO:0003735 ... P60489 37537169
    801311 8ev7:1Q (2.89) BS04 MG ? GO:0003735 ... P60489 37537169
    801312 8ev7:1R (2.89) BS01 rna ? GO:0003735 ... Q9Z9H5 37537169
    801313 8ev7:1S (2.89) BS01 rna ? GO:0003735 ... Q5SHQ4 37537169
    801314 8ev7:1S (2.89) BS02 rna ? GO:0003735 ... Q5SHQ4 37537169
    801315 8ev7:1T (2.89) BS01 rna ? GO:0003735 ... P60490 37537169
    801316 8ev7:1T (2.89) BS02 rna ? GO:0003735 ... P60490 37537169
    801317 8ev7:1T (2.89) BS03 MG ? GO:0003735 ... P60490 37537169
    801318 8ev7:1T (2.89) BS04 MG ? GO:0003735 ... P60490 37537169
    801319 8ev7:1U (2.89) BS01 rna ? GO:0000027 ... P60491 37537169
    801320 8ev7:1U (2.89) BS02 MG ? GO:0000027 ... P60491 37537169
    801321 8ev7:1V (2.89) BS01 rna ? GO:0003723 ... P60492 37537169
    801322 8ev7:1V (2.89) BS02 MG ? GO:0003723 ... P60492 37537169
    801323 8ev7:1W (2.89) BS01 rna ? GO:0003735 ... Q5SHP3 37537169
    801324 8ev7:1W (2.89) BS02 MG ? GO:0003735 ... Q5SHP3 37537169
    801325 8ev7:1X (2.89) BS01 rna ? GO:0003735 ... Q5SHP0 37537169
    801326 8ev7:1Y (2.89) BS01 rna ? GO:0003723 ... Q5SHP9 37537169
    801327 8ev7:1Y (2.89) BS02 ZN ? GO:0003723 ... Q5SHP9 37537169
    801328 8ev7:1Z (2.89) BS01 rna ? GO:0003723 ... Q5SHZ1 37537169
    801329 8ev7:1Z (2.89) BS02 rna ? GO:0003723 ... Q5SHZ1 37537169
    801330 8ev7:1b (2.89) BS01 rna ? GO:0003735 ... P80371 37537169
    801331 8ev7:1c (2.89) BS01 rna ? GO:0003676 ... P80372 37537169
    801332 8ev7:1d (2.89) BS01 rna ? GO:0003723 ... P80373 37537169
    801333 8ev7:1d (2.89) BS02 SF4 ? GO:0003723 ... P80373 37537169
    801334 8ev7:1e (2.89) BS01 rna ? GO:0003723 ... Q5SHQ5 37537169
    801335 8ev7:1e (2.89) BS02 MG ? GO:0003723 ... Q5SHQ5 37537169
    801336 8ev7:1f (2.89) BS01 rna ? GO:0003735 ... Q5SLP8 37537169
    801337 8ev7:1g (2.89) BS01 rna ? GO:0000049 ... P17291 37537169
    801338 8ev7:1g (2.89) BS02 rna ? GO:0000049 ... P17291 37537169
    801339 8ev7:1h (2.89) BS01 rna ? GO:0003735 ... P0DOY9 37537169
    801340 8ev7:1i (2.89) BS01 rna ? GO:0003723 ... P80374 37537169
    801341 8ev7:1i (2.89) BS02 rna ? GO:0003723 ... P80374 37537169
    801342 8ev7:1j (2.89) BS01 rna ? GO:0000049 ... Q5SHN7 37537169
    801343 8ev7:1k (2.89) BS01 rna ? GO:0003735 ... P80376 37537169
    801344 8ev7:1k (2.89) BS02 MG ? GO:0003735 ... P80376 37537169
    801345 8ev7:1l (2.89) BS01 rna ? GO:0000049 ... Q5SHN3 37537169
    801346 8ev7:1l (2.89) BS02 rna ? GO:0000049 ... Q5SHN3 37537169
    801347 8ev7:1l (2.89) BS03 MG ? GO:0000049 ... Q5SHN3 37537169
    801348 8ev7:1l (2.89) BS04 MG ? GO:0000049 ... Q5SHN3 37537169
    801349 8ev7:1l (2.89) BS05 MG ? GO:0000049 ... Q5SHN3 37537169
    801350 8ev7:1m (2.89) BS01 rna ? GO:0000049 ... P80377 37537169
    801351 8ev7:1m (2.89) BS02 rna ? GO:0000049 ... P80377 37537169
    801352 8ev7:1m (2.89) BS03 rna ? GO:0000049 ... P80377 37537169
    801353 8ev7:1m (2.89) BS04 rna ? GO:0000049 ... P80377 37537169
    801354 8ev7:1m (2.89) BS05 MG ? GO:0000049 ... P80377 37537169
    801355 8ev7:1n (2.89) BS01 rna ? GO:0003735 ... P0DOY6 37537169
    801356 8ev7:1n (2.89) BS02 ZN ? GO:0003735 ... P0DOY6 37537169
    801357 8ev7:1o (2.89) BS01 rna ? GO:0003735 ... Q5SJ76 37537169
    801358 8ev7:1o (2.89) BS02 rna ? GO:0003735 ... Q5SJ76 37537169
    801359 8ev7:1p (2.89) BS01 rna ? GO:0003735 ... Q5SJH3 37537169
    801360 8ev7:1q (2.89) BS01 rna ? GO:0003735 ... P0DOY7 37537169
    801361 8ev7:1r (2.89) BS01 rna ? GO:0003735 ... Q5SLQ0 37537169
    801362 8ev7:1s (2.89) BS01 rna ? GO:0000028 ... Q5SHP2 37537169
    801363 8ev7:1t (2.89) BS01 rna ? GO:0003723 ... P80380 37537169
    801364 8ev7:20 (2.89) BS01 rna ? GO:0003735 ... P60493 37537169
    801365 8ev7:20 (2.89) BS02 rna ? GO:0003735 ... P60493 37537169
    801366 8ev7:20 (2.89) BS03 rna ? GO:0003735 ... P60493 37537169
    801367 8ev7:21 (2.89) BS01 rna ? GO:0003735 ... P60494 37537169
    801368 8ev7:22 (2.89) BS01 rna ? GO:0003735 ... Q5SHP6 37537169
    801369 8ev7:23 (2.89) BS01 rna ? GO:0003735 ... Q5SHQ6 37537169
    801370 8ev7:23 (2.89) BS02 rna ? GO:0003735 ... Q5SHQ6 37537169
    801371 8ev7:24 (2.89) BS01 rna ? GO:0003735 ... Q5SJE1 37537169
    801372 8ev7:24 (2.89) BS02 ZN ? GO:0003735 ... Q5SJE1 37537169
    801373 8ev7:25 (2.89) BS01 rna ? GO:0003735 ... P80339 37537169
    801374 8ev7:25 (2.89) BS02 ZN ? GO:0003735 ... P80339 37537169
    801375 8ev7:26 (2.89) BS01 rna ? GO:0003735 ... P35871 37537169
    801376 8ev7:26 (2.89) BS02 ZN ? GO:0003735 ... P35871 37537169
    801377 8ev7:27 (2.89) BS01 rna ? GO:0003735 ... P80340 37537169
    801378 8ev7:28 (2.89) BS01 rna ? GO:0003735 ... Q5SKU1 37537169
    801379 8ev7:29 (2.89) BS01 rna ? GO:0003735 ... Q5SHR2 37537169
    801380 8ev7:29 (2.89) BS02 ZN ? GO:0003735 ... Q5SHR2 37537169
    801381 8ev7:2D (2.89) BS01 rna ? GO:0002181 ... P60405 37537169
    801382 8ev7:2D (2.89) BS02 rna ? GO:0002181 ... P60405 37537169
    801383 8ev7:2D (2.89) BS03 MG ? GO:0002181 ... P60405 37537169
    801384 8ev7:2D (2.89) BS04 MG ? GO:0002181 ... P60405 37537169
    801385 8ev7:2E (2.89) BS01 rna ? GO:0003735 ... Q5SHN8 37537169
    801386 8ev7:2E (2.89) BS02 MG ? GO:0003735 ... Q5SHN8 37537169
    801387 8ev7:2F (2.89) BS01 rna ? GO:0003735 ... Q5SHN9 37537169
    801388 8ev7:2F (2.89) BS02 MG ? GO:0003735 ... Q5SHN9 37537169
    801389 8ev7:2F (2.89) BS03 MG ? GO:0003735 ... Q5SHN9 37537169
    801390 8ev7:2F (2.89) BS04 MG ? GO:0003735 ... Q5SHN9 37537169
    801391 8ev7:2G (2.89) BS01 rna ? GO:0000049 ... Q5SHQ0 37537169
    801392 8ev7:2G (2.89) BS02 rna ? GO:0000049 ... Q5SHQ0 37537169
    801393 8ev7:2G (2.89) BS03 rna ? GO:0000049 ... Q5SHQ0 37537169
    801394 8ev7:2H (2.89) BS01 rna ? GO:0002181 ... P0DOY8 37537169
    801395 8ev7:2I (2.89) BS01 rna ? GO:0003735 ... Q5SLQ1 37537169
    801396 8ev7:2N (2.89) BS01 rna ? GO:0003729 ... P60488 37537169
    801397 8ev7:2O (2.89) BS01 rna ? GO:0003735 ... Q5SHP8 37537169
    801398 8ev7:2O (2.89) BS02 rna ? GO:0003735 ... Q5SHP8 37537169
    801399 8ev7:2P (2.89) BS01 rna ? GO:0003735 ... Q5SHQ7 37537169
    801400 8ev7:2Q (2.89) BS01 rna ? GO:0003735 ... P60489 37537169
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).