SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    801601 8fc1:23 (2.5) BS02 rna ? GO:0003735 ... Q5SHQ6 37452045
    801602 8fc1:23 (2.5) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    801603 8fc1:24 (2.5) BS01 rna ? GO:0003735 ... Q5SJE1 37452045
    801604 8fc1:24 (2.5) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    801605 8fc1:25 (2.5) BS01 rna ? GO:0003735 ... P80339 37452045
    801606 8fc1:25 (2.5) BS02 MG ? GO:0003735 ... P80339 37452045
    801607 8fc1:25 (2.5) BS03 MG ? GO:0003735 ... P80339 37452045
    801608 8fc1:25 (2.5) BS04 ZN ? GO:0003735 ... P80339 37452045
    801609 8fc1:26 (2.5) BS01 rna ? GO:0000049 ... P35871 37452045
    801610 8fc1:26 (2.5) BS02 ZN ? GO:0000049 ... P35871 37452045
    801611 8fc1:27 (2.5) BS01 rna ? GO:0003735 ... P80340 37452045
    801612 8fc1:27 (2.5) BS02 MG ? GO:0003735 ... P80340 37452045
    801613 8fc1:27 (2.5) BS03 MG ? GO:0003735 ... P80340 37452045
    801614 8fc1:28 (2.5) BS01 rna ? GO:0003735 ... Q5SKU1 37452045
    801615 8fc1:29 (2.5) BS01 rna ? GO:0003735 ... Q5SHR2 37452045
    801616 8fc1:29 (2.5) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    801617 8fc1:2D (2.5) BS01 rna ? GO:0002181 ... P60405 37452045
    801618 8fc1:2D (2.5) BS02 rna ? GO:0002181 ... P60405 37452045
    801619 8fc1:2D (2.5) BS03 MG ? GO:0002181 ... P60405 37452045
    801620 8fc1:2D (2.5) BS04 MG ? GO:0002181 ... P60405 37452045
    801621 8fc1:2D (2.5) BS05 MG ? GO:0002181 ... P60405 37452045
    801622 8fc1:2D (2.5) BS06 MG ? GO:0002181 ... P60405 37452045
    801623 8fc1:2D (2.5) BS07 MG ? GO:0002181 ... P60405 37452045
    801624 8fc1:2D (2.5) BS08 MG ? GO:0002181 ... P60405 37452045
    801625 8fc1:2D (2.5) BS09 MG ? GO:0002181 ... P60405 37452045
    801626 8fc1:2D (2.5) BS10 MG ? GO:0002181 ... P60405 37452045
    801627 8fc1:2D (2.5) BS11 MG ? GO:0002181 ... P60405 37452045
    801628 8fc1:2E (2.5) BS01 rna ? GO:0003735 ... Q5SHN8 37452045
    801629 8fc1:2E (2.5) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    801630 8fc1:2F (2.5) BS01 rna ? GO:0003735 ... Q5SHN9 37452045
    801631 8fc1:2F (2.5) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    801632 8fc1:2F (2.5) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    801633 8fc1:2F (2.5) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    801634 8fc1:2G (2.5) BS01 rna ? GO:0000049 ... Q5SHQ0 37452045
    801635 8fc1:2G (2.5) BS02 rna ? GO:0000049 ... Q5SHQ0 37452045
    801636 8fc1:2G (2.5) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    801637 8fc1:2G (2.5) BS04 MG ? GO:0000049 ... Q5SHQ0 37452045
    801638 8fc1:2H (2.5) BS01 rna ? GO:0002181 ... P0DOY8 37452045
    801639 8fc1:2I (2.5) BS01 rna ? GO:0003735 ... Q5SLQ1 37452045
    801640 8fc1:2N (2.5) BS01 rna ? GO:0003729 ... P60488 37452045
    801641 8fc1:2O (2.5) BS01 rna ? GO:0003735 ... Q5SHP8 37452045
    801642 8fc1:2O (2.5) BS02 rna ? GO:0003735 ... Q5SHP8 37452045
    801643 8fc1:2P (2.5) BS01 rna ? GO:0003735 ... Q5SHQ7 37452045
    801644 8fc1:2Q (2.5) BS01 rna ? GO:0000049 ... P60489 37452045
    801645 8fc1:2Q (2.5) BS02 rna ? GO:0000049 ... P60489 37452045
    801646 8fc1:2Q (2.5) BS03 MG ? GO:0000049 ... P60489 37452045
    801647 8fc1:2Q (2.5) BS04 MG ? GO:0000049 ... P60489 37452045
    801648 8fc1:2R (2.5) BS01 rna ? GO:0003735 ... Q9Z9H5 37452045
    801649 8fc1:2S (2.5) BS01 rna ? GO:0003735 ... Q5SHQ4 37452045
    801650 8fc1:2S (2.5) BS02 rna ? GO:0003735 ... Q5SHQ4 37452045
    801651 8fc1:2T (2.5) BS01 rna ? GO:0003735 ... P60490 37452045
    801652 8fc1:2T (2.5) BS02 rna ? GO:0003735 ... P60490 37452045
    801653 8fc1:2U (2.5) BS01 rna ? GO:0000027 ... P60491 37452045
    801654 8fc1:2V (2.5) BS01 rna ? GO:0003723 ... P60492 37452045
    801655 8fc1:2V (2.5) BS02 MG ? GO:0003723 ... P60492 37452045
    801656 8fc1:2V (2.5) BS03 MG ? GO:0003723 ... P60492 37452045
    801657 8fc1:2W (2.5) BS01 rna ? GO:0003735 ... Q5SHP3 37452045
    801658 8fc1:2W (2.5) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    801659 8fc1:2W (2.5) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    801660 8fc1:2X (2.5) BS01 rna ? GO:0003735 ... Q5SHP0 37452045
    801661 8fc1:2Y (2.5) BS01 rna ? GO:0003723 ... Q5SHP9 37452045
    801662 8fc1:2Y (2.5) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    801663 8fc1:2Z (2.5) BS01 rna ? GO:0003723 ... Q5SHZ1 37452045
    801664 8fc1:2Z (2.5) BS02 rna ? GO:0003723 ... Q5SHZ1 37452045
    801665 8fc1:2b (2.5) BS01 rna ? GO:0003735 ... P80371 37452045
    801666 8fc1:2c (2.5) BS01 rna ? GO:0003676 ... P80372 37452045
    801667 8fc1:2d (2.5) BS01 rna ? GO:0003723 ... P80373 37452045
    801668 8fc1:2d (2.5) BS02 SF4 ? GO:0003723 ... P80373 37452045
    801669 8fc1:2e (2.5) BS01 rna ? GO:0003723 ... Q5SHQ5 37452045
    801670 8fc1:2f (2.5) BS01 rna ? GO:0003735 ... Q5SLP8 37452045
    801671 8fc1:2f (2.5) BS02 MG ? GO:0003735 ... Q5SLP8 37452045
    801672 8fc1:2g (2.5) BS01 rna ? GO:0000049 ... P17291 37452045
    801673 8fc1:2h (2.5) BS01 rna ? GO:0003735 ... P0DOY9 37452045
    801674 8fc1:2i (2.5) BS01 rna ? GO:0000049 ... P80374 37452045
    801675 8fc1:2j (2.5) BS01 rna ? GO:0000049 ... Q5SHN7 37452045
    801676 8fc1:2j (2.5) BS02 MG ? GO:0000049 ... Q5SHN7 37452045
    801677 8fc1:2k (2.5) BS01 rna ? GO:0003735 ... P80376 37452045
    801678 8fc1:2k (2.5) BS02 MG ? GO:0003735 ... P80376 37452045
    801679 8fc1:2l (2.5) BS01 rna ? GO:0000049 ... Q5SHN3 37452045
    801680 8fc1:2l (2.5) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    801681 8fc1:2m (2.5) BS01 rna ? GO:0000049 ... P80377 37452045
    801682 8fc1:2n (2.5) BS01 rna ? GO:0003735 ... P0DOY6 37452045
    801683 8fc1:2n (2.5) BS02 ZN ? GO:0003735 ... P0DOY6 37452045
    801684 8fc1:2o (2.5) BS01 rna ? GO:0003735 ... Q5SJ76 37452045
    801685 8fc1:2o (2.5) BS02 rna ? GO:0003735 ... Q5SJ76 37452045
    801686 8fc1:2p (2.5) BS01 rna ? GO:0003735 ... Q5SJH3 37452045
    801687 8fc1:2q (2.5) BS01 rna ? GO:0003735 ... P0DOY7 37452045
    801688 8fc1:2r (2.5) BS01 rna ? GO:0003735 ... Q5SLQ0 37452045
    801689 8fc1:2s (2.5) BS01 rna ? GO:0000028 ... Q5SHP2 37452045
    801690 8fc1:2t (2.5) BS01 rna ? GO:0003723 ... P80380 37452045
    801691 8fc1:2t (2.5) BS02 MG ? GO:0003723 ... P80380 37452045
    801692 8fc1:2y (2.5) BS01 rna ? GO:0005515 ... P0AD49 37452045
    801693 8fc2:10 (2.5) BS01 rna ? GO:0003735 ... P60493 37452045
    801694 8fc2:10 (2.5) BS02 rna ? GO:0003735 ... P60493 37452045
    801695 8fc2:10 (2.5) BS03 MG ? GO:0003735 ... P60493 37452045
    801696 8fc2:10 (2.5) BS04 MG ? GO:0003735 ... P60493 37452045
    801697 8fc2:11 (2.5) BS01 rna ? GO:0003735 ... P60494 37452045
    801698 8fc2:11 (2.5) BS02 MG ? GO:0003735 ... P60494 37452045
    801699 8fc2:12 (2.5) BS01 rna ? GO:0003735 ... Q5SHP6 37452045
    801700 8fc2:13 (2.5) BS01 rna ? GO:0003735 ... Q5SHQ6 37452045
    801701 8fc2:13 (2.5) BS02 rna ? GO:0003735 ... Q5SHQ6 37452045
    801702 8fc2:13 (2.5) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    801703 8fc2:13 (2.5) BS04 MG ? GO:0003735 ... Q5SHQ6 37452045
    801704 8fc2:14 (2.5) BS01 rna ? GO:0003735 ... Q5SJE1 37452045
    801705 8fc2:14 (2.5) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    801706 8fc2:15 (2.5) BS01 rna ? GO:0003735 ... P80339 37452045
    801707 8fc2:15 (2.5) BS02 MG ? GO:0003735 ... P80339 37452045
    801708 8fc2:15 (2.5) BS03 MG ? GO:0003735 ... P80339 37452045
    801709 8fc2:15 (2.5) BS04 ZN ? GO:0003735 ... P80339 37452045
    801710 8fc2:16 (2.5) BS01 rna ? GO:0000049 ... P35871 37452045
    801711 8fc2:16 (2.5) BS02 ZN ? GO:0000049 ... P35871 37452045
    801712 8fc2:17 (2.5) BS01 rna ? GO:0003735 ... P80340 37452045
    801713 8fc2:17 (2.5) BS02 MG ? GO:0003735 ... P80340 37452045
    801714 8fc2:17 (2.5) BS03 MG ? GO:0003735 ... P80340 37452045
    801715 8fc2:17 (2.5) BS04 MG ? GO:0003735 ... P80340 37452045
    801716 8fc2:18 (2.5) BS01 rna ? GO:0003735 ... Q5SKU1 37452045
    801717 8fc2:18 (2.5) BS02 MG ? GO:0003735 ... Q5SKU1 37452045
    801718 8fc2:18 (2.5) BS03 MG ? GO:0003735 ... Q5SKU1 37452045
    801719 8fc2:19 (2.5) BS01 rna ? GO:0003735 ... Q5SHR2 37452045
    801720 8fc2:19 (2.5) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    801721 8fc2:1D (2.5) BS01 rna ? GO:0002181 ... P60405 37452045
    801722 8fc2:1D (2.5) BS02 rna ? GO:0002181 ... P60405 37452045
    801723 8fc2:1D (2.5) BS03 MG ? GO:0002181 ... P60405 37452045
    801724 8fc2:1D (2.5) BS04 MG ? GO:0002181 ... P60405 37452045
    801725 8fc2:1D (2.5) BS05 MG ? GO:0002181 ... P60405 37452045
    801726 8fc2:1D (2.5) BS06 MG ? GO:0002181 ... P60405 37452045
    801727 8fc2:1D (2.5) BS07 MG ? GO:0002181 ... P60405 37452045
    801728 8fc2:1D (2.5) BS08 MG ? GO:0002181 ... P60405 37452045
    801729 8fc2:1D (2.5) BS09 MG ? GO:0002181 ... P60405 37452045
    801730 8fc2:1D (2.5) BS10 MG ? GO:0002181 ... P60405 37452045
    801731 8fc2:1D (2.5) BS11 MG ? GO:0002181 ... P60405 37452045
    801732 8fc2:1D (2.5) BS12 MG ? GO:0002181 ... P60405 37452045
    801733 8fc2:1E (2.5) BS01 rna ? GO:0003735 ... Q5SHN8 37452045
    801734 8fc2:1E (2.5) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    801735 8fc2:1E (2.5) BS03 MG ? GO:0003735 ... Q5SHN8 37452045
    801736 8fc2:1E (2.5) BS04 MG ? GO:0003735 ... Q5SHN8 37452045
    801737 8fc2:1E (2.5) BS05 MG ? GO:0003735 ... Q5SHN8 37452045
    801738 8fc2:1F (2.5) BS01 rna ? GO:0003735 ... Q5SHN9 37452045
    801739 8fc2:1F (2.5) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    801740 8fc2:1F (2.5) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    801741 8fc2:1F (2.5) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    801742 8fc2:1F (2.5) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    801743 8fc2:1F (2.5) BS06 MG ? GO:0003735 ... Q5SHN9 37452045
    801744 8fc2:1F (2.5) BS07 MG ? GO:0003735 ... Q5SHN9 37452045
    801745 8fc2:1F (2.5) BS08 MG ? GO:0003735 ... Q5SHN9 37452045
    801746 8fc2:1F (2.5) BS09 MG ? GO:0003735 ... Q5SHN9 37452045
    801747 8fc2:1F (2.5) BS10 MG ? GO:0003735 ... Q5SHN9 37452045
    801748 8fc2:1F (2.5) BS11 MG ? GO:0003735 ... Q5SHN9 37452045
    801749 8fc2:1F (2.5) BS12 MG ? GO:0003735 ... Q5SHN9 37452045
    801750 8fc2:1F (2.5) BS13 MG ? GO:0003735 ... Q5SHN9 37452045
    801751 8fc2:1F (2.5) BS14 ARG ? GO:0003735 ... Q5SHN9 37452045
    801752 8fc2:1G (2.5) BS01 rna ? GO:0000049 ... Q5SHQ0 37452045
    801753 8fc2:1G (2.5) BS02 rna ? GO:0000049 ... Q5SHQ0 37452045
    801754 8fc2:1G (2.5) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    801755 8fc2:1G (2.5) BS04 MG ? GO:0000049 ... Q5SHQ0 37452045
    801756 8fc2:1H (2.5) BS01 rna ? GO:0002181 ... P0DOY8 37452045
    801757 8fc2:1I (2.5) BS01 rna ? GO:0003735 ... Q5SLQ1 37452045
    801758 8fc2:1N (2.5) BS01 rna ? GO:0003729 ... P60488 37452045
    801759 8fc2:1N (2.5) BS02 MG ? GO:0003729 ... P60488 37452045
    801760 8fc2:1N (2.5) BS03 MG ? GO:0003729 ... P60488 37452045
    801761 8fc2:1O (2.5) BS01 rna ? GO:0003735 ... Q5SHP8 37452045
    801762 8fc2:1O (2.5) BS02 rna ? GO:0003735 ... Q5SHP8 37452045
    801763 8fc2:1P (2.5) BS01 rna ? GO:0003735 ... Q5SHQ7 37452045
    801764 8fc2:1P (2.5) BS02 MG ? GO:0003735 ... Q5SHQ7 37452045
    801765 8fc2:1P (2.5) BS03 MG ? GO:0003735 ... Q5SHQ7 37452045
    801766 8fc2:1Q (2.5) BS01 rna ? GO:0000049 ... P60489 37452045
    801767 8fc2:1Q (2.5) BS02 rna ? GO:0000049 ... P60489 37452045
    801768 8fc2:1Q (2.5) BS03 MG ? GO:0000049 ... P60489 37452045
    801769 8fc2:1Q (2.5) BS04 MG ? GO:0000049 ... P60489 37452045
    801770 8fc2:1Q (2.5) BS05 MG ? GO:0000049 ... P60489 37452045
    801771 8fc2:1Q (2.5) BS06 MG ? GO:0000049 ... P60489 37452045
    801772 8fc2:1R (2.5) BS01 rna ? GO:0003735 ... Q9Z9H5 37452045
    801773 8fc2:1R (2.5) BS02 MG ? GO:0003735 ... Q9Z9H5 37452045
    801774 8fc2:1R (2.5) BS03 MG ? GO:0003735 ... Q9Z9H5 37452045
    801775 8fc2:1R (2.5) BS04 MG ? GO:0003735 ... Q9Z9H5 37452045
    801776 8fc2:1S (2.5) BS01 rna ? GO:0003735 ... Q5SHQ4 37452045
    801777 8fc2:1S (2.5) BS02 rna ? GO:0003735 ... Q5SHQ4 37452045
    801778 8fc2:1T (2.5) BS01 rna ? GO:0003735 ... P60490 37452045
    801779 8fc2:1T (2.5) BS02 rna ? GO:0003735 ... P60490 37452045
    801780 8fc2:1U (2.5) BS01 rna ? GO:0000027 ... P60491 37452045
    801781 8fc2:1U (2.5) BS02 MG ? GO:0000027 ... P60491 37452045
    801782 8fc2:1U (2.5) BS03 MG ? GO:0000027 ... P60491 37452045
    801783 8fc2:1U (2.5) BS04 MG ? GO:0000027 ... P60491 37452045
    801784 8fc2:1U (2.5) BS05 MG ? GO:0000027 ... P60491 37452045
    801785 8fc2:1U (2.5) BS06 MG ? GO:0000027 ... P60491 37452045
    801786 8fc2:1U (2.5) BS07 MG ? GO:0000027 ... P60491 37452045
    801787 8fc2:1V (2.5) BS01 rna ? GO:0003723 ... P60492 37452045
    801788 8fc2:1V (2.5) BS02 MG ? GO:0003723 ... P60492 37452045
    801789 8fc2:1V (2.5) BS03 MG ? GO:0003723 ... P60492 37452045
    801790 8fc2:1V (2.5) BS04 MG ? GO:0003723 ... P60492 37452045
    801791 8fc2:1W (2.5) BS01 rna ? GO:0003735 ... Q5SHP3 37452045
    801792 8fc2:1X (2.5) BS01 rna ? GO:0003735 ... Q5SHP0 37452045
    801793 8fc2:1Y (2.5) BS01 rna ? GO:0003723 ... Q5SHP9 37452045
    801794 8fc2:1Y (2.5) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    801795 8fc2:1Z (2.5) BS01 rna ? GO:0003723 ... Q5SHZ1 37452045
    801796 8fc2:1Z (2.5) BS02 rna ? GO:0003723 ... Q5SHZ1 37452045
    801797 8fc2:1b (2.5) BS01 rna ? GO:0003735 ... P80371 37452045
    801798 8fc2:1b (2.5) BS02 MG ? GO:0003735 ... P80371 37452045
    801799 8fc2:1c (2.5) BS01 rna ? GO:0003676 ... P80372 37452045
    801800 8fc2:1d (2.5) BS01 rna ? GO:0003723 ... P80373 37452045

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).