SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    801601 8evp:Aj (2.38) BS02 rna ? GO:0000448 ... P49166 37595043
    801602 8evp:Aj (2.38) BS03 MG ? GO:0000448 ... P49166 37595043
    801603 8evp:Ak (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    801604 8evp:Al (2.38) BS01 rna ? GO:0002181 ... P04650 37595043
    801605 8evp:Al (2.38) BS02 rna ? GO:0002181 ... P04650 37595043
    801606 8evp:Am (2.38) BS01 rna ? GO:0000027 ... P0CH08 37595043
    801607 8evp:Ao (2.38) BS01 rna ? GO:0002181 ... P0CX27 37595043
    801608 8evp:Ao (2.38) BS02 ZN ? GO:0002181 ... P0CX27 37595043
    801609 8evp:Ap (2.38) BS01 rna ? GO:0002181 ... P0CX25 37595043
    801610 8evp:BA (2.38) BS01 rna ? GO:0000028 ... P32905 37595043
    801611 8evp:BB (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    801612 8evp:BB (2.38) BS02 rna ? GO:0003735 ... N/A 37595043
    801613 8evp:BC (2.38) BS01 rna ? GO:0003723 ... N/A 37595043
    801614 8evp:BD (2.38) BS01 rna ? GO:0003723 ... N/A 37595043
    801615 8evp:BE (2.38) BS01 rna ? GO:0002181 ... P0CX35 37595043
    801616 8evp:BE (2.38) BS02 MG ? GO:0002181 ... P0CX35 37595043
    801617 8evp:BF (2.38) BS01 rna ? GO:0003723 ... A0A1L4AA68 37595043
    801618 8evp:BF (2.38) BS02 rna ? GO:0003723 ... A0A1L4AA68 37595043
    801619 8evp:BG (2.38) BS01 rna ? GO:0000462 ... P0CX37 37595043
    801620 8evp:BH (2.38) BS01 rna ? GO:0002181 ... P26786 37595043
    801621 8evp:BI (2.38) BS01 rna ? GO:0000462 ... P0CX39 37595043
    801622 8evp:BI (2.38) BS02 rna ? GO:0000462 ... P0CX39 37595043
    801623 8evp:BJ (2.38) BS01 rna ? GO:0000462 ... O13516 37595043
    801624 8evp:BK (2.38) BS01 rna ? GO:0000054 ... Q08745 37595043
    801625 8evp:BL (2.38) BS01 rna ? GO:0000028 ... P0CX47 37595043
    801626 8evp:BM (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    801627 8evp:BN (2.38) BS01 rna ? GO:0000462 ... P05756 37595043
    801628 8evp:BN (2.38) BS02 rna ? GO:0000462 ... P05756 37595043
    801629 8evp:BO (2.38) BS01 rna ? GO:0000028 ... P06367 37595043
    801630 8evp:BP (2.38) BS01 rna ? GO:0003723 ... N/A 37595043
    801631 8evp:BQ (2.38) BS01 rna ? GO:0000462 ... P0CX51 37595043
    801632 8evp:BR (2.38) BS01 rna ? GO:0000028 ... P02407 37595043
    801633 8evp:BS (2.38) BS01 rna ? GO:0000054 ... P0CX55 37595043
    801634 8evp:BT (2.38) BS01 rna ? GO:0000054 ... P07280 37595043
    801635 8evp:BU (2.38) BS01 rna ? GO:0003723 ... N/A 37595043
    801636 8evp:BV (2.38) BS01 rna ? GO:0000447 ... P0C0V8 37595043
    801637 8evp:BW (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    801638 8evp:BX (2.38) BS01 rna ? GO:0003735 ... P0CY39 37595043
    801639 8evp:BY (2.38) BS01 rna ? GO:0000462 ... P0CX31 37595043
    801640 8evp:BZ (2.38) BS01 rna ? N/A N/A 37595043
    801641 8evp:BZ (2.38) BS02 rna ? N/A N/A 37595043
    801642 8evp:Ba (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    801643 8evp:Bb (2.38) BS01 rna ? GO:0000028 ... P35997 37595043
    801644 8evp:Bc (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    801645 8evp:Bd (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    801646 8evp:Be (2.38) BS01 rna ? GO:0002181 ... P0CX33 37595043
    801647 8evp:Bf (2.38) BS01 rna ? GO:0003735 ... N/A 37595043
    801648 8evp:Bg (2.38) BS01 rna ? GO:0001965 ... P38011 37595043
    801649 8evp:E (2.38) BS01 rna ? GO:0003723 ... N/A 37595043
    801650 8evp:E (2.38) BS02 rna ? GO:0003723 ... N/A 37595043
    801651 8evq:AA (2.72) BS01 rna ? GO:0002181 ... P0CX45 37595043
    801652 8evq:AA (2.72) BS02 rna ? GO:0002181 ... P0CX45 37595043
    801653 8evq:AB (2.72) BS01 rna ? GO:0000027 ... P14126 37595043
    801654 8evq:AC (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    801655 8evq:AC (2.72) BS02 rna ? GO:0003735 ... N/A 37595043
    801656 8evq:AC (2.72) BS03 MG ? GO:0003735 ... N/A 37595043
    801657 8evq:AD (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    801658 8evq:AD (2.72) BS02 rna ? GO:0003735 ... N/A 37595043
    801659 8evq:AE (2.72) BS01 rna ? GO:0000027 ... Q02326 37595043
    801660 8evq:AF (2.72) BS01 rna ? GO:0000463 ... P05737 37595043
    801661 8evq:AF (2.72) BS02 rna ? GO:0000463 ... P05737 37595043
    801662 8evq:AG (2.72) BS01 rna ? GO:0000470 ... P17076 37595043
    801663 8evq:AG (2.72) BS02 rna ? GO:0000470 ... P17076 37595043
    801664 8evq:AH (2.72) BS01 rna ? GO:0002181 ... P05738 37595043
    801665 8evq:AI (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    801666 8evq:AI (2.72) BS02 rna ? GO:0003735 ... N/A 37595043
    801667 8evq:AJ (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    801668 8evq:AJ (2.72) BS02 rna ? GO:0003735 ... N/A 37595043
    801669 8evq:AL (2.72) BS01 rna ? GO:0002181 ... Q12690 37595043
    801670 8evq:AL (2.72) BS02 rna ? GO:0002181 ... Q12690 37595043
    801671 8evq:AM (2.72) BS01 rna ? GO:0000027 ... P36105 37595043
    801672 8evq:AN (2.72) BS01 rna ? GO:0000470 ... P05748 37595043
    801673 8evq:AN (2.72) BS02 rna ? GO:0000470 ... P05748 37595043
    801674 8evq:AN (2.72) BS03 MG ? GO:0000470 ... P05748 37595043
    801675 8evq:AO (2.72) BS01 rna ? GO:0000470 ... P26784 37595043
    801676 8evq:AP (2.72) BS01 rna ? GO:0000448 ... P05740 37595043
    801677 8evq:AP (2.72) BS02 rna ? GO:0000448 ... P05740 37595043
    801678 8evq:AQ (2.72) BS01 rna ? GO:0002181 ... P0CX49 37595043
    801679 8evq:AR (2.72) BS01 rna ? GO:0002181 ... P0CX82 37595043
    801680 8evq:AR (2.72) BS02 rna ? GO:0002181 ... P0CX82 37595043
    801681 8evq:AS (2.72) BS01 rna ? GO:0003735 ... B3LMD0 37595043
    801682 8evq:AS (2.72) BS02 rna ? GO:0003735 ... B3LMD0 37595043
    801683 8evq:AT (2.72) BS01 rna ? GO:0002181 ... Q02753 37595043
    801684 8evq:AT (2.72) BS02 rna ? GO:0002181 ... Q02753 37595043
    801685 8evq:AU (2.72) BS01 rna ? GO:0002181 ... P05749 37595043
    801686 8evq:AV (2.72) BS01 rna ? GO:0002181 ... P0CX41 37595043
    801687 8evq:AW (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    801688 8evq:AX (2.72) BS01 rna ? GO:0000027 ... P04456 37595043
    801689 8evq:AX (2.72) BS02 rna ? GO:0000027 ... P04456 37595043
    801690 8evq:AY (2.72) BS01 rna ? GO:0002181 ... P05743 37595043
    801691 8evq:AY (2.72) BS02 rna ? GO:0002181 ... P05743 37595043
    801692 8evq:AZ (2.72) BS01 rna ? GO:0002181 ... P0C2H6 37595043
    801693 8evq:Aa (2.72) BS01 rna ? GO:0002181 ... P02406 37595043
    801694 8evq:Ab (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    801695 8evq:Ac (2.72) BS01 rna ? GO:0002181 ... P14120 37595043
    801696 8evq:Ad (2.72) BS01 rna ? GO:0002181 ... P0C2H8 37595043
    801697 8evq:Ae (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    801698 8evq:Ae (2.72) BS02 MG ? GO:0003735 ... N/A 37595043
    801699 8evq:Af (2.72) BS01 rna ? GO:0000027 ... P05744 37595043
    801700 8evq:Ag (2.72) BS01 rna ? GO:0002181 ... P87262 37595043
    801701 8evq:Ah (2.72) BS01 rna ? GO:0000463 ... P0CX84 37595043
    801702 8evq:Ah (2.72) BS02 rna ? GO:0000463 ... P0CX84 37595043
    801703 8evq:Ah (2.72) BS03 MG ? GO:0000463 ... P0CX84 37595043
    801704 8evq:Ai (2.72) BS01 rna ? GO:0000470 ... P05745 37595043
    801705 8evq:Aj (2.72) BS01 rna ? GO:0000448 ... P49166 37595043
    801706 8evq:Aj (2.72) BS02 rna ? GO:0000448 ... P49166 37595043
    801707 8evq:Aj (2.72) BS03 MG ? GO:0000448 ... P49166 37595043
    801708 8evq:Ak (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    801709 8evq:Al (2.72) BS01 rna ? GO:0002181 ... P04650 37595043
    801710 8evq:Al (2.72) BS02 rna ? GO:0002181 ... P04650 37595043
    801711 8evq:Am (2.72) BS01 rna ? GO:0000027 ... P0CH08 37595043
    801712 8evq:Ao (2.72) BS01 rna ? GO:0002181 ... P0CX27 37595043
    801713 8evq:Ao (2.72) BS02 ZN ? GO:0002181 ... P0CX27 37595043
    801714 8evq:Ap (2.72) BS01 rna ? GO:0002181 ... P0CX25 37595043
    801715 8evq:BA (2.72) BS01 rna ? GO:0000028 ... P32905 37595043
    801716 8evq:BB (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    801717 8evq:BC (2.72) BS01 rna ? GO:0003723 ... N/A 37595043
    801718 8evq:BD (2.72) BS01 rna ? GO:0003723 ... N/A 37595043
    801719 8evq:BE (2.72) BS01 rna ? GO:0002181 ... P0CX35 37595043
    801720 8evq:BF (2.72) BS01 rna ? GO:0003723 ... A0A1L4AA68 37595043
    801721 8evq:BF (2.72) BS02 rna ? GO:0003723 ... A0A1L4AA68 37595043
    801722 8evq:BG (2.72) BS01 rna ? GO:0000462 ... P0CX37 37595043
    801723 8evq:BH (2.72) BS01 rna ? GO:0002181 ... P26786 37595043
    801724 8evq:BI (2.72) BS01 rna ? GO:0000462 ... P0CX39 37595043
    801725 8evq:BI (2.72) BS02 rna ? GO:0000462 ... P0CX39 37595043
    801726 8evq:BJ (2.72) BS01 rna ? GO:0000462 ... O13516 37595043
    801727 8evq:BK (2.72) BS01 rna ? GO:0000054 ... Q08745 37595043
    801728 8evq:BL (2.72) BS01 rna ? GO:0000028 ... P0CX47 37595043
    801729 8evq:BM (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    801730 8evq:BN (2.72) BS01 rna ? GO:0000462 ... P05756 37595043
    801731 8evq:BO (2.72) BS01 rna ? GO:0000028 ... P06367 37595043
    801732 8evq:BO (2.72) BS02 rna ? GO:0000028 ... P06367 37595043
    801733 8evq:BP (2.72) BS01 rna ? GO:0003723 ... N/A 37595043
    801734 8evq:BQ (2.72) BS01 rna ? GO:0000462 ... P0CX51 37595043
    801735 8evq:BR (2.72) BS01 rna ? GO:0000028 ... P02407 37595043
    801736 8evq:BS (2.72) BS01 rna ? GO:0000054 ... P0CX55 37595043
    801737 8evq:BT (2.72) BS01 rna ? GO:0000054 ... P07280 37595043
    801738 8evq:BU (2.72) BS01 rna ? GO:0003723 ... N/A 37595043
    801739 8evq:BV (2.72) BS01 rna ? GO:0000447 ... P0C0V8 37595043
    801740 8evq:BW (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    801741 8evq:BX (2.72) BS01 rna ? GO:0000462 ... P0CX29 37595043
    801742 8evq:BY (2.72) BS01 rna ? GO:0000462 ... P0CX31 37595043
    801743 8evq:BZ (2.72) BS01 rna ? N/A N/A 37595043
    801744 8evq:BZ (2.72) BS02 rna ? N/A N/A 37595043
    801745 8evq:Ba (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    801746 8evq:Bb (2.72) BS01 rna ? GO:0000028 ... P35997 37595043
    801747 8evq:Bc (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    801748 8evq:Bd (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    801749 8evq:Be (2.72) BS01 rna ? GO:0002181 ... P0CX33 37595043
    801750 8evq:Bf (2.72) BS01 rna ? GO:0003735 ... N/A 37595043
    801751 8evq:Bg (2.72) BS01 rna ? GO:0001965 ... P38011 37595043
    801752 8evq:DC (2.72) BS01 rna 3.6.5.- GO:0003746 ... P32324 37595043
    801753 8evq:DC (2.72) BS02 rna 3.6.5.- GO:0003746 ... P32324 37595043
    801754 8evq:DC (2.72) BS03 rna 3.6.5.- GO:0003746 ... P32324 37595043
    801755 8evq:DC (2.72) BS04 GDP 3.6.5.- GO:0003746 ... P32324 37595043
    801756 8evq:DC (2.72) BS05 SO1 3.6.5.- GO:0003746 ... P32324 37595043
    801757 8evq:E (2.72) BS01 rna ? GO:0003723 ... N/A 37595043
    801758 8evq:E (2.72) BS02 rna ? GO:0003723 ... N/A 37595043
    801759 8evq:V (2.72) BS01 rna ? GO:0000027 ... P05317 37595043
    801760 8evr:AA (2.87) BS01 rna ? GO:0002181 ... P0CX45 37595043
    801761 8evr:AB (2.87) BS01 rna ? GO:0000027 ... P14126 37595043
    801762 8evr:AC (2.87) BS01 rna ? GO:0003735 ... N/A 37595043
    801763 8evr:AC (2.87) BS02 rna ? GO:0003735 ... N/A 37595043
    801764 8evr:AD (2.87) BS01 rna ? GO:0003735 ... N/A 37595043
    801765 8evr:AD (2.87) BS02 rna ? GO:0003735 ... N/A 37595043
    801766 8evr:AE (2.87) BS01 rna ? GO:0000027 ... Q02326 37595043
    801767 8evr:AF (2.87) BS01 rna ? GO:0000463 ... P05737 37595043
    801768 8evr:AF (2.87) BS02 rna ? GO:0000463 ... P05737 37595043
    801769 8evr:AG (2.87) BS01 rna ? GO:0000470 ... P17076 37595043
    801770 8evr:AG (2.87) BS02 rna ? GO:0000470 ... P17076 37595043
    801771 8evr:AH (2.87) BS01 rna ? GO:0002181 ... P05738 37595043
    801772 8evr:AI (2.87) BS01 rna ? GO:0003735 ... N/A 37595043
    801773 8evr:AI (2.87) BS02 rna ? GO:0003735 ... N/A 37595043
    801774 8evr:AJ (2.87) BS01 rna ? GO:0003735 ... N/A 37595043
    801775 8evr:AJ (2.87) BS02 rna ? GO:0003735 ... N/A 37595043
    801776 8evr:AL (2.87) BS01 rna ? GO:0002181 ... Q12690 37595043
    801777 8evr:AL (2.87) BS02 rna ? GO:0002181 ... Q12690 37595043
    801778 8evr:AM (2.87) BS01 rna ? GO:0000027 ... P36105 37595043
    801779 8evr:AN (2.87) BS01 rna ? GO:0000470 ... P05748 37595043
    801780 8evr:AN (2.87) BS02 rna ? GO:0000470 ... P05748 37595043
    801781 8evr:AN (2.87) BS03 MG ? GO:0000470 ... P05748 37595043
    801782 8evr:AO (2.87) BS01 rna ? GO:0000470 ... P26784 37595043
    801783 8evr:AO (2.87) BS02 MG ? GO:0000470 ... P26784 37595043
    801784 8evr:AP (2.87) BS01 rna ? GO:0000448 ... P05740 37595043
    801785 8evr:AP (2.87) BS02 rna ? GO:0000448 ... P05740 37595043
    801786 8evr:AQ (2.87) BS01 rna ? GO:0002181 ... P0CX49 37595043
    801787 8evr:AR (2.87) BS01 rna ? GO:0002181 ... P0CX82 37595043
    801788 8evr:AR (2.87) BS02 rna ? GO:0002181 ... P0CX82 37595043
    801789 8evr:AS (2.87) BS01 rna ? GO:0003735 ... B3LMD0 37595043
    801790 8evr:AS (2.87) BS02 rna ? GO:0003735 ... B3LMD0 37595043
    801791 8evr:AT (2.87) BS01 rna ? GO:0002181 ... Q02753 37595043
    801792 8evr:AT (2.87) BS02 rna ? GO:0002181 ... Q02753 37595043
    801793 8evr:AT (2.87) BS03 MG ? GO:0002181 ... Q02753 37595043
    801794 8evr:AU (2.87) BS01 rna ? GO:0002181 ... P05749 37595043
    801795 8evr:AV (2.87) BS01 rna ? GO:0002181 ... P0CX41 37595043
    801796 8evr:AW (2.87) BS01 rna ? GO:0003735 ... N/A 37595043
    801797 8evr:AX (2.87) BS01 rna ? GO:0000027 ... P04456 37595043
    801798 8evr:AX (2.87) BS02 rna ? GO:0000027 ... P04456 37595043
    801799 8evr:AY (2.87) BS01 rna ? GO:0002181 ... P05743 37595043
    801800 8evr:AY (2.87) BS02 rna ? GO:0002181 ... P05743 37595043

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).