SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    802001 8fc3:1Q (2.6) BS06 MG ? GO:0000049 ... P60489 37452045
    802002 8fc3:1R (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 37452045
    802003 8fc3:1R (2.6) BS02 MG ? GO:0003735 ... Q9Z9H5 37452045
    802004 8fc3:1R (2.6) BS03 MG ? GO:0003735 ... Q9Z9H5 37452045
    802005 8fc3:1R (2.6) BS04 MG ? GO:0003735 ... Q9Z9H5 37452045
    802006 8fc3:1R (2.6) BS05 MG ? GO:0003735 ... Q9Z9H5 37452045
    802007 8fc3:1S (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 37452045
    802008 8fc3:1S (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 37452045
    802009 8fc3:1T (2.6) BS01 rna ? GO:0003735 ... P60490 37452045
    802010 8fc3:1T (2.6) BS02 rna ? GO:0003735 ... P60490 37452045
    802011 8fc3:1T (2.6) BS03 MG ? GO:0003735 ... P60490 37452045
    802012 8fc3:1U (2.6) BS01 rna ? GO:0000027 ... P60491 37452045
    802013 8fc3:1U (2.6) BS02 MG ? GO:0000027 ... P60491 37452045
    802014 8fc3:1U (2.6) BS03 MG ? GO:0000027 ... P60491 37452045
    802015 8fc3:1U (2.6) BS04 MG ? GO:0000027 ... P60491 37452045
    802016 8fc3:1U (2.6) BS05 MG ? GO:0000027 ... P60491 37452045
    802017 8fc3:1U (2.6) BS06 MG ? GO:0000027 ... P60491 37452045
    802018 8fc3:1U (2.6) BS07 MG ? GO:0000027 ... P60491 37452045
    802019 8fc3:1V (2.6) BS01 rna ? GO:0003723 ... P60492 37452045
    802020 8fc3:1V (2.6) BS02 MG ? GO:0003723 ... P60492 37452045
    802021 8fc3:1V (2.6) BS03 MG ? GO:0003723 ... P60492 37452045
    802022 8fc3:1V (2.6) BS04 MG ? GO:0003723 ... P60492 37452045
    802023 8fc3:1W (2.6) BS01 rna ? GO:0003735 ... Q5SHP3 37452045
    802024 8fc3:1W (2.6) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    802025 8fc3:1X (2.6) BS01 rna ? GO:0003735 ... Q5SHP0 37452045
    802026 8fc3:1Y (2.6) BS01 rna ? GO:0003723 ... Q5SHP9 37452045
    802027 8fc3:1Y (2.6) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    802028 8fc3:1Z (2.6) BS01 rna ? GO:0003723 ... Q5SHZ1 37452045
    802029 8fc3:1Z (2.6) BS02 rna ? GO:0003723 ... Q5SHZ1 37452045
    802030 8fc3:1b (2.6) BS01 rna ? GO:0003735 ... P80371 37452045
    802031 8fc3:1b (2.6) BS02 MG ? GO:0003735 ... P80371 37452045
    802032 8fc3:1c (2.6) BS01 rna ? GO:0003676 ... P80372 37452045
    802033 8fc3:1d (2.6) BS01 rna ? GO:0003723 ... P80373 37452045
    802034 8fc3:1d (2.6) BS02 SF4 ? GO:0003723 ... P80373 37452045
    802035 8fc3:1e (2.6) BS01 rna ? GO:0003723 ... Q5SHQ5 37452045
    802036 8fc3:1e (2.6) BS02 MG ? GO:0003723 ... Q5SHQ5 37452045
    802037 8fc3:1f (2.6) BS01 rna ? GO:0003735 ... Q5SLP8 37452045
    802038 8fc3:1f (2.6) BS02 MG ? GO:0003735 ... Q5SLP8 37452045
    802039 8fc3:1g (2.6) BS01 rna ? GO:0000049 ... P17291 37452045
    802040 8fc3:1h (2.6) BS01 rna ? GO:0003735 ... P0DOY9 37452045
    802041 8fc3:1i (2.6) BS01 rna ? GO:0000049 ... P80374 37452045
    802042 8fc3:1j (2.6) BS01 rna ? GO:0000049 ... Q5SHN7 37452045
    802043 8fc3:1k (2.6) BS01 rna ? GO:0003735 ... P80376 37452045
    802044 8fc3:1k (2.6) BS02 MG ? GO:0003735 ... P80376 37452045
    802045 8fc3:1l (2.6) BS01 rna ? GO:0000049 ... Q5SHN3 37452045
    802046 8fc3:1l (2.6) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    802047 8fc3:1m (2.6) BS01 rna ? GO:0000049 ... P80377 37452045
    802048 8fc3:1m (2.6) BS02 MG ? GO:0000049 ... P80377 37452045
    802049 8fc3:1n (2.6) BS01 rna ? GO:0003735 ... P0DOY6 37452045
    802050 8fc3:1n (2.6) BS02 MG ? GO:0003735 ... P0DOY6 37452045
    802051 8fc3:1n (2.6) BS03 ZN ? GO:0003735 ... P0DOY6 37452045
    802052 8fc3:1o (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 37452045
    802053 8fc3:1o (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 37452045
    802054 8fc3:1p (2.6) BS01 rna ? GO:0003735 ... Q5SJH3 37452045
    802055 8fc3:1q (2.6) BS01 rna ? GO:0003735 ... P0DOY7 37452045
    802056 8fc3:1r (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 37452045
    802057 8fc3:1s (2.6) BS01 rna ? GO:0000028 ... Q5SHP2 37452045
    802058 8fc3:1t (2.6) BS01 rna ? GO:0003723 ... P80380 37452045
    802059 8fc3:1t (2.6) BS02 MG ? GO:0003723 ... P80380 37452045
    802060 8fc3:1y (2.6) BS01 rna ? GO:0005515 ... P0AD49 37452045
    802061 8fc3:1y (2.6) BS02 MG ? GO:0005515 ... P0AD49 37452045
    802062 8fc3:1y (2.6) BS03 MG ? GO:0005515 ... P0AD49 37452045
    802063 8fc3:20 (2.6) BS01 rna ? GO:0003735 ... P60493 37452045
    802064 8fc3:20 (2.6) BS02 rna ? GO:0003735 ... P60493 37452045
    802065 8fc3:21 (2.6) BS01 rna ? GO:0003735 ... P60494 37452045
    802066 8fc3:22 (2.6) BS01 rna ? GO:0003735 ... Q5SHP6 37452045
    802067 8fc3:23 (2.6) BS01 rna ? GO:0003735 ... Q5SHQ6 37452045
    802068 8fc3:23 (2.6) BS02 rna ? GO:0003735 ... Q5SHQ6 37452045
    802069 8fc3:24 (2.6) BS01 rna ? GO:0003735 ... Q5SJE1 37452045
    802070 8fc3:24 (2.6) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    802071 8fc3:25 (2.6) BS01 rna ? GO:0003735 ... P80339 37452045
    802072 8fc3:25 (2.6) BS02 MG ? GO:0003735 ... P80339 37452045
    802073 8fc3:25 (2.6) BS03 MG ? GO:0003735 ... P80339 37452045
    802074 8fc3:25 (2.6) BS04 ZN ? GO:0003735 ... P80339 37452045
    802075 8fc3:26 (2.6) BS01 rna ? GO:0000049 ... P35871 37452045
    802076 8fc3:26 (2.6) BS02 MG ? GO:0000049 ... P35871 37452045
    802077 8fc3:26 (2.6) BS03 ZN ? GO:0000049 ... P35871 37452045
    802078 8fc3:27 (2.6) BS01 rna ? GO:0003735 ... P80340 37452045
    802079 8fc3:28 (2.6) BS01 rna ? GO:0003735 ... Q5SKU1 37452045
    802080 8fc3:29 (2.6) BS01 rna ? GO:0003735 ... Q5SHR2 37452045
    802081 8fc3:29 (2.6) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    802082 8fc3:2D (2.6) BS01 rna ? GO:0002181 ... P60405 37452045
    802083 8fc3:2D (2.6) BS02 rna ? GO:0002181 ... P60405 37452045
    802084 8fc3:2D (2.6) BS03 MG ? GO:0002181 ... P60405 37452045
    802085 8fc3:2D (2.6) BS04 MG ? GO:0002181 ... P60405 37452045
    802086 8fc3:2D (2.6) BS05 MG ? GO:0002181 ... P60405 37452045
    802087 8fc3:2D (2.6) BS06 MG ? GO:0002181 ... P60405 37452045
    802088 8fc3:2D (2.6) BS07 MG ? GO:0002181 ... P60405 37452045
    802089 8fc3:2D (2.6) BS08 MG ? GO:0002181 ... P60405 37452045
    802090 8fc3:2D (2.6) BS09 MG ? GO:0002181 ... P60405 37452045
    802091 8fc3:2E (2.6) BS01 rna ? GO:0003735 ... Q5SHN8 37452045
    802092 8fc3:2E (2.6) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    802093 8fc3:2E (2.6) BS03 MG ? GO:0003735 ... Q5SHN8 37452045
    802094 8fc3:2F (2.6) BS01 rna ? GO:0003735 ... Q5SHN9 37452045
    802095 8fc3:2F (2.6) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    802096 8fc3:2F (2.6) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    802097 8fc3:2F (2.6) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    802098 8fc3:2F (2.6) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    802099 8fc3:2G (2.6) BS01 rna ? GO:0000049 ... Q5SHQ0 37452045
    802100 8fc3:2G (2.6) BS02 rna ? GO:0000049 ... Q5SHQ0 37452045
    802101 8fc3:2G (2.6) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    802102 8fc3:2G (2.6) BS04 MG ? GO:0000049 ... Q5SHQ0 37452045
    802103 8fc3:2G (2.6) BS05 MG ? GO:0000049 ... Q5SHQ0 37452045
    802104 8fc3:2H (2.6) BS01 rna ? GO:0002181 ... P0DOY8 37452045
    802105 8fc3:2I (2.6) BS01 rna ? GO:0003735 ... Q5SLQ1 37452045
    802106 8fc3:2I (2.6) BS02 MG ? GO:0003735 ... Q5SLQ1 37452045
    802107 8fc3:2N (2.6) BS01 rna ? GO:0003729 ... P60488 37452045
    802108 8fc3:2O (2.6) BS01 rna ? GO:0003735 ... Q5SHP8 37452045
    802109 8fc3:2O (2.6) BS02 rna ? GO:0003735 ... Q5SHP8 37452045
    802110 8fc3:2P (2.6) BS01 rna ? GO:0003735 ... Q5SHQ7 37452045
    802111 8fc3:2Q (2.6) BS01 rna ? GO:0000049 ... P60489 37452045
    802112 8fc3:2Q (2.6) BS02 rna ? GO:0000049 ... P60489 37452045
    802113 8fc3:2Q (2.6) BS03 MG ? GO:0000049 ... P60489 37452045
    802114 8fc3:2R (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 37452045
    802115 8fc3:2R (2.6) BS02 MG ? GO:0003735 ... Q9Z9H5 37452045
    802116 8fc3:2S (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 37452045
    802117 8fc3:2S (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 37452045
    802118 8fc3:2T (2.6) BS01 rna ? GO:0003735 ... P60490 37452045
    802119 8fc3:2T (2.6) BS02 rna ? GO:0003735 ... P60490 37452045
    802120 8fc3:2U (2.6) BS01 rna ? GO:0000027 ... P60491 37452045
    802121 8fc3:2V (2.6) BS01 rna ? GO:0003723 ... P60492 37452045
    802122 8fc3:2V (2.6) BS02 MG ? GO:0003723 ... P60492 37452045
    802123 8fc3:2V (2.6) BS03 MG ? GO:0003723 ... P60492 37452045
    802124 8fc3:2W (2.6) BS01 rna ? GO:0003735 ... Q5SHP3 37452045
    802125 8fc3:2W (2.6) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    802126 8fc3:2W (2.6) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    802127 8fc3:2X (2.6) BS01 rna ? GO:0003735 ... Q5SHP0 37452045
    802128 8fc3:2Y (2.6) BS01 rna ? GO:0003723 ... Q5SHP9 37452045
    802129 8fc3:2Y (2.6) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    802130 8fc3:2Z (2.6) BS01 rna ? GO:0003723 ... Q5SHZ1 37452045
    802131 8fc3:2Z (2.6) BS02 rna ? GO:0003723 ... Q5SHZ1 37452045
    802132 8fc3:2b (2.6) BS01 rna ? GO:0003735 ... P80371 37452045
    802133 8fc3:2c (2.6) BS01 rna ? GO:0003676 ... P80372 37452045
    802134 8fc3:2d (2.6) BS01 rna ? GO:0003723 ... P80373 37452045
    802135 8fc3:2d (2.6) BS02 SF4 ? GO:0003723 ... P80373 37452045
    802136 8fc3:2e (2.6) BS01 rna ? GO:0003723 ... Q5SHQ5 37452045
    802137 8fc3:2f (2.6) BS01 rna ? GO:0003735 ... Q5SLP8 37452045
    802138 8fc3:2f (2.6) BS02 MG ? GO:0003735 ... Q5SLP8 37452045
    802139 8fc3:2g (2.6) BS01 rna ? GO:0000049 ... P17291 37452045
    802140 8fc3:2h (2.6) BS01 rna ? GO:0003735 ... P0DOY9 37452045
    802141 8fc3:2i (2.6) BS01 rna ? GO:0000049 ... P80374 37452045
    802142 8fc3:2j (2.6) BS01 rna ? GO:0000049 ... Q5SHN7 37452045
    802143 8fc3:2k (2.6) BS01 rna ? GO:0003735 ... P80376 37452045
    802144 8fc3:2k (2.6) BS02 MG ? GO:0003735 ... P80376 37452045
    802145 8fc3:2l (2.6) BS01 rna ? GO:0000049 ... Q5SHN3 37452045
    802146 8fc3:2l (2.6) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    802147 8fc3:2m (2.6) BS01 rna ? GO:0000049 ... P80377 37452045
    802148 8fc3:2n (2.6) BS01 rna ? GO:0003735 ... P0DOY6 37452045
    802149 8fc3:2n (2.6) BS02 ZN ? GO:0003735 ... P0DOY6 37452045
    802150 8fc3:2o (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 37452045
    802151 8fc3:2o (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 37452045
    802152 8fc3:2p (2.6) BS01 rna ? GO:0003735 ... Q5SJH3 37452045
    802153 8fc3:2q (2.6) BS01 rna ? GO:0003735 ... P0DOY7 37452045
    802154 8fc3:2r (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 37452045
    802155 8fc3:2s (2.6) BS01 rna ? GO:0000028 ... Q5SHP2 37452045
    802156 8fc3:2t (2.6) BS01 rna ? GO:0003723 ... P80380 37452045
    802157 8fc3:2y (2.6) BS01 rna ? GO:0005515 ... P0AD49 37452045
    802158 8fc4:10 (2.45) BS01 rna ? GO:0003735 ... P60493 37452045
    802159 8fc4:10 (2.45) BS02 rna ? GO:0003735 ... P60493 37452045
    802160 8fc4:10 (2.45) BS03 MG ? GO:0003735 ... P60493 37452045
    802161 8fc4:10 (2.45) BS04 MG ? GO:0003735 ... P60493 37452045
    802162 8fc4:11 (2.45) BS01 rna ? GO:0003735 ... P60494 37452045
    802163 8fc4:12 (2.45) BS01 rna ? GO:0003735 ... Q5SHP6 37452045
    802164 8fc4:13 (2.45) BS01 rna ? GO:0003735 ... Q5SHQ6 37452045
    802165 8fc4:13 (2.45) BS02 rna ? GO:0003735 ... Q5SHQ6 37452045
    802166 8fc4:13 (2.45) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    802167 8fc4:13 (2.45) BS04 MG ? GO:0003735 ... Q5SHQ6 37452045
    802168 8fc4:14 (2.45) BS01 rna ? GO:0003735 ... Q5SJE1 37452045
    802169 8fc4:14 (2.45) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    802170 8fc4:15 (2.45) BS01 rna ? GO:0003735 ... P80339 37452045
    802171 8fc4:15 (2.45) BS02 MG ? GO:0003735 ... P80339 37452045
    802172 8fc4:15 (2.45) BS03 MG ? GO:0003735 ... P80339 37452045
    802173 8fc4:15 (2.45) BS04 MG ? GO:0003735 ... P80339 37452045
    802174 8fc4:15 (2.45) BS05 ZN ? GO:0003735 ... P80339 37452045
    802175 8fc4:16 (2.45) BS01 rna ? GO:0000049 ... P35871 37452045
    802176 8fc4:16 (2.45) BS02 ZN ? GO:0000049 ... P35871 37452045
    802177 8fc4:17 (2.45) BS01 rna ? GO:0003735 ... P80340 37452045
    802178 8fc4:17 (2.45) BS02 MG ? GO:0003735 ... P80340 37452045
    802179 8fc4:17 (2.45) BS03 MG ? GO:0003735 ... P80340 37452045
    802180 8fc4:17 (2.45) BS04 MG ? GO:0003735 ... P80340 37452045
    802181 8fc4:17 (2.45) BS05 MG ? GO:0003735 ... P80340 37452045
    802182 8fc4:18 (2.45) BS01 rna ? GO:0003735 ... Q5SKU1 37452045
    802183 8fc4:18 (2.45) BS02 MG ? GO:0003735 ... Q5SKU1 37452045
    802184 8fc4:19 (2.45) BS01 rna ? GO:0003735 ... Q5SHR2 37452045
    802185 8fc4:19 (2.45) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    802186 8fc4:1D (2.45) BS01 rna ? GO:0002181 ... P60405 37452045
    802187 8fc4:1D (2.45) BS02 rna ? GO:0002181 ... P60405 37452045
    802188 8fc4:1D (2.45) BS03 MG ? GO:0002181 ... P60405 37452045
    802189 8fc4:1D (2.45) BS04 MG ? GO:0002181 ... P60405 37452045
    802190 8fc4:1D (2.45) BS05 MG ? GO:0002181 ... P60405 37452045
    802191 8fc4:1D (2.45) BS06 MG ? GO:0002181 ... P60405 37452045
    802192 8fc4:1D (2.45) BS07 MG ? GO:0002181 ... P60405 37452045
    802193 8fc4:1D (2.45) BS08 MG ? GO:0002181 ... P60405 37452045
    802194 8fc4:1D (2.45) BS09 MG ? GO:0002181 ... P60405 37452045
    802195 8fc4:1D (2.45) BS10 MG ? GO:0002181 ... P60405 37452045
    802196 8fc4:1D (2.45) BS11 MG ? GO:0002181 ... P60405 37452045
    802197 8fc4:1D (2.45) BS12 MG ? GO:0002181 ... P60405 37452045
    802198 8fc4:1D (2.45) BS13 MG ? GO:0002181 ... P60405 37452045
    802199 8fc4:1D (2.45) BS14 MG ? GO:0002181 ... P60405 37452045
    802200 8fc4:1E (2.45) BS01 rna ? GO:0003735 ... Q5SHN8 37452045

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).