SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    802201 8fc4:1E (2.45) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    802202 8fc4:1E (2.45) BS03 MG ? GO:0003735 ... Q5SHN8 37452045
    802203 8fc4:1E (2.45) BS04 MG ? GO:0003735 ... Q5SHN8 37452045
    802204 8fc4:1E (2.45) BS05 MG ? GO:0003735 ... Q5SHN8 37452045
    802205 8fc4:1F (2.45) BS01 rna ? GO:0003735 ... Q5SHN9 37452045
    802206 8fc4:1F (2.45) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    802207 8fc4:1F (2.45) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    802208 8fc4:1F (2.45) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    802209 8fc4:1F (2.45) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    802210 8fc4:1F (2.45) BS06 MG ? GO:0003735 ... Q5SHN9 37452045
    802211 8fc4:1F (2.45) BS07 MG ? GO:0003735 ... Q5SHN9 37452045
    802212 8fc4:1F (2.45) BS08 MG ? GO:0003735 ... Q5SHN9 37452045
    802213 8fc4:1F (2.45) BS09 MG ? GO:0003735 ... Q5SHN9 37452045
    802214 8fc4:1F (2.45) BS10 MG ? GO:0003735 ... Q5SHN9 37452045
    802215 8fc4:1F (2.45) BS11 MG ? GO:0003735 ... Q5SHN9 37452045
    802216 8fc4:1F (2.45) BS12 MG ? GO:0003735 ... Q5SHN9 37452045
    802217 8fc4:1F (2.45) BS13 MG ? GO:0003735 ... Q5SHN9 37452045
    802218 8fc4:1F (2.45) BS14 MG ? GO:0003735 ... Q5SHN9 37452045
    802219 8fc4:1F (2.45) BS15 MG ? GO:0003735 ... Q5SHN9 37452045
    802220 8fc4:1F (2.45) BS16 ARG ? GO:0003735 ... Q5SHN9 37452045
    802221 8fc4:1G (2.45) BS01 rna ? GO:0000049 ... Q5SHQ0 37452045
    802222 8fc4:1G (2.45) BS02 rna ? GO:0000049 ... Q5SHQ0 37452045
    802223 8fc4:1G (2.45) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    802224 8fc4:1G (2.45) BS04 MG ? GO:0000049 ... Q5SHQ0 37452045
    802225 8fc4:1H (2.45) BS01 rna ? GO:0002181 ... P0DOY8 37452045
    802226 8fc4:1I (2.45) BS01 rna ? GO:0003735 ... Q5SLQ1 37452045
    802227 8fc4:1N (2.45) BS01 rna ? GO:0003729 ... P60488 37452045
    802228 8fc4:1N (2.45) BS02 MG ? GO:0003729 ... P60488 37452045
    802229 8fc4:1N (2.45) BS03 MG ? GO:0003729 ... P60488 37452045
    802230 8fc4:1O (2.45) BS01 rna ? GO:0003735 ... Q5SHP8 37452045
    802231 8fc4:1O (2.45) BS02 rna ? GO:0003735 ... Q5SHP8 37452045
    802232 8fc4:1P (2.45) BS01 rna ? GO:0003735 ... Q5SHQ7 37452045
    802233 8fc4:1P (2.45) BS02 MG ? GO:0003735 ... Q5SHQ7 37452045
    802234 8fc4:1P (2.45) BS03 MG ? GO:0003735 ... Q5SHQ7 37452045
    802235 8fc4:1P (2.45) BS04 MG ? GO:0003735 ... Q5SHQ7 37452045
    802236 8fc4:1Q (2.45) BS01 rna ? GO:0000049 ... P60489 37452045
    802237 8fc4:1Q (2.45) BS02 rna ? GO:0000049 ... P60489 37452045
    802238 8fc4:1Q (2.45) BS03 MG ? GO:0000049 ... P60489 37452045
    802239 8fc4:1Q (2.45) BS04 MG ? GO:0000049 ... P60489 37452045
    802240 8fc4:1Q (2.45) BS05 MG ? GO:0000049 ... P60489 37452045
    802241 8fc4:1Q (2.45) BS06 MG ? GO:0000049 ... P60489 37452045
    802242 8fc4:1Q (2.45) BS07 MG ? GO:0000049 ... P60489 37452045
    802243 8fc4:1R (2.45) BS01 rna ? GO:0003735 ... Q9Z9H5 37452045
    802244 8fc4:1R (2.45) BS02 MG ? GO:0003735 ... Q9Z9H5 37452045
    802245 8fc4:1R (2.45) BS03 MG ? GO:0003735 ... Q9Z9H5 37452045
    802246 8fc4:1R (2.45) BS04 MG ? GO:0003735 ... Q9Z9H5 37452045
    802247 8fc4:1R (2.45) BS05 MG ? GO:0003735 ... Q9Z9H5 37452045
    802248 8fc4:1S (2.45) BS01 rna ? GO:0003735 ... Q5SHQ4 37452045
    802249 8fc4:1S (2.45) BS02 rna ? GO:0003735 ... Q5SHQ4 37452045
    802250 8fc4:1T (2.45) BS01 rna ? GO:0003735 ... P60490 37452045
    802251 8fc4:1T (2.45) BS02 rna ? GO:0003735 ... P60490 37452045
    802252 8fc4:1U (2.45) BS01 rna ? GO:0000027 ... P60491 37452045
    802253 8fc4:1U (2.45) BS02 MG ? GO:0000027 ... P60491 37452045
    802254 8fc4:1U (2.45) BS03 MG ? GO:0000027 ... P60491 37452045
    802255 8fc4:1U (2.45) BS04 MG ? GO:0000027 ... P60491 37452045
    802256 8fc4:1U (2.45) BS05 MG ? GO:0000027 ... P60491 37452045
    802257 8fc4:1U (2.45) BS06 MG ? GO:0000027 ... P60491 37452045
    802258 8fc4:1U (2.45) BS07 MG ? GO:0000027 ... P60491 37452045
    802259 8fc4:1V (2.45) BS01 rna ? GO:0003723 ... P60492 37452045
    802260 8fc4:1V (2.45) BS02 MG ? GO:0003723 ... P60492 37452045
    802261 8fc4:1V (2.45) BS03 MG ? GO:0003723 ... P60492 37452045
    802262 8fc4:1V (2.45) BS04 MG ? GO:0003723 ... P60492 37452045
    802263 8fc4:1W (2.45) BS01 rna ? GO:0003735 ... Q5SHP3 37452045
    802264 8fc4:1W (2.45) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    802265 8fc4:1W (2.45) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    802266 8fc4:1W (2.45) BS04 MG ? GO:0003735 ... Q5SHP3 37452045
    802267 8fc4:1X (2.45) BS01 rna ? GO:0003735 ... Q5SHP0 37452045
    802268 8fc4:1Y (2.45) BS01 rna ? GO:0003723 ... Q5SHP9 37452045
    802269 8fc4:1Y (2.45) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    802270 8fc4:1Z (2.45) BS01 rna ? GO:0003723 ... Q5SHZ1 37452045
    802271 8fc4:1Z (2.45) BS02 rna ? GO:0003723 ... Q5SHZ1 37452045
    802272 8fc4:1b (2.45) BS01 rna ? GO:0003735 ... P80371 37452045
    802273 8fc4:1b (2.45) BS02 MG ? GO:0003735 ... P80371 37452045
    802274 8fc4:1c (2.45) BS01 rna ? GO:0003676 ... P80372 37452045
    802275 8fc4:1d (2.45) BS01 rna ? GO:0003723 ... P80373 37452045
    802276 8fc4:1d (2.45) BS02 SF4 ? GO:0003723 ... P80373 37452045
    802277 8fc4:1e (2.45) BS01 rna ? GO:0003723 ... Q5SHQ5 37452045
    802278 8fc4:1e (2.45) BS02 MG ? GO:0003723 ... Q5SHQ5 37452045
    802279 8fc4:1f (2.45) BS01 rna ? GO:0003735 ... Q5SLP8 37452045
    802280 8fc4:1g (2.45) BS01 rna ? GO:0000049 ... P17291 37452045
    802281 8fc4:1h (2.45) BS01 rna ? GO:0003735 ... P0DOY9 37452045
    802282 8fc4:1i (2.45) BS01 rna ? GO:0000049 ... P80374 37452045
    802283 8fc4:1j (2.45) BS01 rna ? GO:0000049 ... Q5SHN7 37452045
    802284 8fc4:1k (2.45) BS01 rna ? GO:0003735 ... P80376 37452045
    802285 8fc4:1k (2.45) BS02 MG ? GO:0003735 ... P80376 37452045
    802286 8fc4:1l (2.45) BS01 rna ? GO:0000049 ... Q5SHN3 37452045
    802287 8fc4:1l (2.45) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    802288 8fc4:1m (2.45) BS01 rna ? GO:0000049 ... P80377 37452045
    802289 8fc4:1m (2.45) BS02 rna ? GO:0000049 ... P80377 37452045
    802290 8fc4:1m (2.45) BS03 MG ? GO:0000049 ... P80377 37452045
    802291 8fc4:1n (2.45) BS01 rna ? GO:0003735 ... P0DOY6 37452045
    802292 8fc4:1n (2.45) BS02 MG ? GO:0003735 ... P0DOY6 37452045
    802293 8fc4:1n (2.45) BS03 ZN ? GO:0003735 ... P0DOY6 37452045
    802294 8fc4:1o (2.45) BS01 rna ? GO:0003735 ... Q5SJ76 37452045
    802295 8fc4:1o (2.45) BS02 rna ? GO:0003735 ... Q5SJ76 37452045
    802296 8fc4:1p (2.45) BS01 rna ? GO:0003735 ... Q5SJH3 37452045
    802297 8fc4:1q (2.45) BS01 rna ? GO:0003735 ... P0DOY7 37452045
    802298 8fc4:1r (2.45) BS01 rna ? GO:0003735 ... Q5SLQ0 37452045
    802299 8fc4:1s (2.45) BS01 rna ? GO:0000028 ... Q5SHP2 37452045
    802300 8fc4:1t (2.45) BS01 rna ? GO:0003723 ... P80380 37452045
    802301 8fc4:1t (2.45) BS02 MG ? GO:0003723 ... P80380 37452045
    802302 8fc4:1y (2.45) BS01 rna ? GO:0005515 ... P0AD49 37452045
    802303 8fc4:1y (2.45) BS02 MG ? GO:0005515 ... P0AD49 37452045
    802304 8fc4:20 (2.45) BS01 rna ? GO:0003735 ... P60493 37452045
    802305 8fc4:20 (2.45) BS02 rna ? GO:0003735 ... P60493 37452045
    802306 8fc4:20 (2.45) BS03 MG ? GO:0003735 ... P60493 37452045
    802307 8fc4:21 (2.45) BS01 rna ? GO:0003735 ... P60494 37452045
    802308 8fc4:22 (2.45) BS01 rna ? GO:0003735 ... Q5SHP6 37452045
    802309 8fc4:23 (2.45) BS01 rna ? GO:0003735 ... Q5SHQ6 37452045
    802310 8fc4:23 (2.45) BS02 rna ? GO:0003735 ... Q5SHQ6 37452045
    802311 8fc4:23 (2.45) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    802312 8fc4:24 (2.45) BS01 rna ? GO:0003735 ... Q5SJE1 37452045
    802313 8fc4:24 (2.45) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    802314 8fc4:25 (2.45) BS01 rna ? GO:0003735 ... P80339 37452045
    802315 8fc4:25 (2.45) BS02 ZN ? GO:0003735 ... P80339 37452045
    802316 8fc4:26 (2.45) BS01 rna ? GO:0000049 ... P35871 37452045
    802317 8fc4:26 (2.45) BS02 ZN ? GO:0000049 ... P35871 37452045
    802318 8fc4:27 (2.45) BS01 rna ? GO:0003735 ... P80340 37452045
    802319 8fc4:27 (2.45) BS02 MG ? GO:0003735 ... P80340 37452045
    802320 8fc4:28 (2.45) BS01 rna ? GO:0003735 ... Q5SKU1 37452045
    802321 8fc4:29 (2.45) BS01 rna ? GO:0003735 ... Q5SHR2 37452045
    802322 8fc4:29 (2.45) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    802323 8fc4:2D (2.45) BS01 rna ? GO:0002181 ... P60405 37452045
    802324 8fc4:2D (2.45) BS02 rna ? GO:0002181 ... P60405 37452045
    802325 8fc4:2D (2.45) BS03 MG ? GO:0002181 ... P60405 37452045
    802326 8fc4:2D (2.45) BS04 MG ? GO:0002181 ... P60405 37452045
    802327 8fc4:2D (2.45) BS05 MG ? GO:0002181 ... P60405 37452045
    802328 8fc4:2E (2.45) BS01 rna ? GO:0003735 ... Q5SHN8 37452045
    802329 8fc4:2E (2.45) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    802330 8fc4:2F (2.45) BS01 rna ? GO:0003735 ... Q5SHN9 37452045
    802331 8fc4:2F (2.45) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    802332 8fc4:2F (2.45) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    802333 8fc4:2F (2.45) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    802334 8fc4:2G (2.45) BS01 rna ? GO:0000049 ... Q5SHQ0 37452045
    802335 8fc4:2G (2.45) BS02 rna ? GO:0000049 ... Q5SHQ0 37452045
    802336 8fc4:2G (2.45) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    802337 8fc4:2H (2.45) BS01 rna ? GO:0002181 ... P0DOY8 37452045
    802338 8fc4:2I (2.45) BS01 rna ? GO:0003735 ... Q5SLQ1 37452045
    802339 8fc4:2N (2.45) BS01 rna ? GO:0003729 ... P60488 37452045
    802340 8fc4:2O (2.45) BS01 rna ? GO:0003735 ... Q5SHP8 37452045
    802341 8fc4:2O (2.45) BS02 rna ? GO:0003735 ... Q5SHP8 37452045
    802342 8fc4:2P (2.45) BS01 rna ? GO:0003735 ... Q5SHQ7 37452045
    802343 8fc4:2Q (2.45) BS01 rna ? GO:0000049 ... P60489 37452045
    802344 8fc4:2Q (2.45) BS02 rna ? GO:0000049 ... P60489 37452045
    802345 8fc4:2Q (2.45) BS03 MG ? GO:0000049 ... P60489 37452045
    802346 8fc4:2Q (2.45) BS04 MG ? GO:0000049 ... P60489 37452045
    802347 8fc4:2R (2.45) BS01 rna ? GO:0003735 ... Q9Z9H5 37452045
    802348 8fc4:2S (2.45) BS01 rna ? GO:0003735 ... Q5SHQ4 37452045
    802349 8fc4:2S (2.45) BS02 rna ? GO:0003735 ... Q5SHQ4 37452045
    802350 8fc4:2T (2.45) BS01 rna ? GO:0003735 ... P60490 37452045
    802351 8fc4:2T (2.45) BS02 rna ? GO:0003735 ... P60490 37452045
    802352 8fc4:2U (2.45) BS01 rna ? GO:0000027 ... P60491 37452045
    802353 8fc4:2V (2.45) BS01 rna ? GO:0003723 ... P60492 37452045
    802354 8fc4:2W (2.45) BS01 rna ? GO:0003735 ... Q5SHP3 37452045
    802355 8fc4:2W (2.45) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    802356 8fc4:2W (2.45) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    802357 8fc4:2X (2.45) BS01 rna ? GO:0003735 ... Q5SHP0 37452045
    802358 8fc4:2Y (2.45) BS01 rna ? GO:0003723 ... Q5SHP9 37452045
    802359 8fc4:2Y (2.45) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    802360 8fc4:2Z (2.45) BS01 rna ? GO:0003723 ... Q5SHZ1 37452045
    802361 8fc4:2Z (2.45) BS02 rna ? GO:0003723 ... Q5SHZ1 37452045
    802362 8fc4:2b (2.45) BS01 rna ? GO:0003735 ... P80371 37452045
    802363 8fc4:2c (2.45) BS01 rna ? GO:0003676 ... P80372 37452045
    802364 8fc4:2d (2.45) BS01 rna ? GO:0003723 ... P80373 37452045
    802365 8fc4:2d (2.45) BS02 SF4 ? GO:0003723 ... P80373 37452045
    802366 8fc4:2e (2.45) BS01 rna ? GO:0003723 ... Q5SHQ5 37452045
    802367 8fc4:2f (2.45) BS01 rna ? GO:0003735 ... Q5SLP8 37452045
    802368 8fc4:2f (2.45) BS02 MG ? GO:0003735 ... Q5SLP8 37452045
    802369 8fc4:2g (2.45) BS01 rna ? GO:0000049 ... P17291 37452045
    802370 8fc4:2h (2.45) BS01 rna ? GO:0003735 ... P0DOY9 37452045
    802371 8fc4:2i (2.45) BS01 rna ? GO:0000049 ... P80374 37452045
    802372 8fc4:2j (2.45) BS01 rna ? GO:0000049 ... Q5SHN7 37452045
    802373 8fc4:2k (2.45) BS01 rna ? GO:0003735 ... P80376 37452045
    802374 8fc4:2k (2.45) BS02 MG ? GO:0003735 ... P80376 37452045
    802375 8fc4:2l (2.45) BS01 rna ? GO:0000049 ... Q5SHN3 37452045
    802376 8fc4:2m (2.45) BS01 rna ? GO:0000049 ... P80377 37452045
    802377 8fc4:2n (2.45) BS01 rna ? GO:0003735 ... P0DOY6 37452045
    802378 8fc4:2n (2.45) BS02 ZN ? GO:0003735 ... P0DOY6 37452045
    802379 8fc4:2o (2.45) BS01 rna ? GO:0003735 ... Q5SJ76 37452045
    802380 8fc4:2o (2.45) BS02 rna ? GO:0003735 ... Q5SJ76 37452045
    802381 8fc4:2p (2.45) BS01 rna ? GO:0003735 ... Q5SJH3 37452045
    802382 8fc4:2q (2.45) BS01 rna ? GO:0003735 ... P0DOY7 37452045
    802383 8fc4:2r (2.45) BS01 rna ? GO:0003735 ... Q5SLQ0 37452045
    802384 8fc4:2s (2.45) BS01 rna ? GO:0000028 ... Q5SHP2 37452045
    802385 8fc4:2t (2.45) BS01 rna ? GO:0003723 ... P80380 37452045
    802386 8fc4:2y (2.45) BS01 rna ? GO:0005515 ... P0AD49 37452045
    802387 8fc5:10 (2.65) BS01 rna ? GO:0003735 ... P60493 37452045
    802388 8fc5:10 (2.65) BS02 rna ? GO:0003735 ... P60493 37452045
    802389 8fc5:10 (2.65) BS03 MG ? GO:0003735 ... P60493 37452045
    802390 8fc5:10 (2.65) BS04 MG ? GO:0003735 ... P60493 37452045
    802391 8fc5:10 (2.65) BS05 MG ? GO:0003735 ... P60493 37452045
    802392 8fc5:11 (2.65) BS01 rna ? GO:0003735 ... P60494 37452045
    802393 8fc5:11 (2.65) BS02 MG ? GO:0003735 ... P60494 37452045
    802394 8fc5:12 (2.65) BS01 rna ? GO:0003735 ... Q5SHP6 37452045
    802395 8fc5:13 (2.65) BS01 rna ? GO:0003735 ... Q5SHQ6 37452045
    802396 8fc5:13 (2.65) BS02 rna ? GO:0003735 ... Q5SHQ6 37452045
    802397 8fc5:13 (2.65) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    802398 8fc5:13 (2.65) BS04 MG ? GO:0003735 ... Q5SHQ6 37452045
    802399 8fc5:14 (2.65) BS01 rna ? GO:0003735 ... Q5SJE1 37452045
    802400 8fc5:14 (2.65) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).