SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    802201 8evs:BT (2.62) BS14 C ? GO:0000054 ... P07280 37595043
    802202 8evs:BT (2.62) BS15 U ? GO:0000054 ... P07280 37595043
    802203 8evs:BT (2.62) BS16 G ? GO:0000054 ... P07280 37595043
    802204 8evs:BU (2.62) BS01 U ? GO:0003723 ... N/A 37595043
    802205 8evs:BU (2.62) BS02 A ? GO:0003723 ... N/A 37595043
    802206 8evs:BU (2.62) BS03 U ? GO:0003723 ... N/A 37595043
    802207 8evs:BU (2.62) BS04 A ? GO:0003723 ... N/A 37595043
    802208 8evs:BU (2.62) BS05 G ? GO:0003723 ... N/A 37595043
    802209 8evs:BU (2.62) BS06 G ? GO:0003723 ... N/A 37595043
    802210 8evs:BU (2.62) BS07 A ? GO:0003723 ... N/A 37595043
    802211 8evs:BU (2.62) BS08 G ? GO:0003723 ... N/A 37595043
    802212 8evs:BU (2.62) BS09 A ? GO:0003723 ... N/A 37595043
    802213 8evs:BU (2.62) BS10 C ? GO:0003723 ... N/A 37595043
    802214 8evs:BV (2.62) BS01 rna ? GO:0000447 ... P0C0V8 37595043
    802215 8evs:BW (2.62) BS01 rna ? GO:0003735 ... N/A 37595043
    802216 8evs:BX (2.62) BS01 rna ? GO:0000462 ... P0CX29 37595043
    802217 8evs:BY (2.62) BS01 rna ? GO:0000462 ... P0CX31 37595043
    802218 8evs:BZ (2.62) BS01 rna ? N/A N/A 37595043
    802219 8evs:BZ (2.62) BS02 C ? N/A N/A 37595043
    802220 8evs:BZ (2.62) BS03 U ? N/A N/A 37595043
    802221 8evs:BZ (2.62) BS04 C ? N/A N/A 37595043
    802222 8evs:BZ (2.62) BS05 G ? N/A N/A 37595043
    802223 8evs:Ba (2.62) BS01 rna ? GO:0003735 ... N/A 37595043
    802224 8evs:Ba (2.62) BS02 A ? GO:0003735 ... N/A 37595043
    802225 8evs:Ba (2.62) BS03 G ? GO:0003735 ... N/A 37595043
    802226 8evs:Ba (2.62) BS04 A ? GO:0003735 ... N/A 37595043
    802227 8evs:Ba (2.62) BS05 U ? GO:0003735 ... N/A 37595043
    802228 8evs:Ba (2.62) BS06 C ? GO:0003735 ... N/A 37595043
    802229 8evs:Ba (2.62) BS07 A ? GO:0003735 ... N/A 37595043
    802230 8evs:Ba (2.62) BS08 U ? GO:0003735 ... N/A 37595043
    802231 8evs:Ba (2.62) BS09 G ? GO:0003735 ... N/A 37595043
    802232 8evs:Bb (2.62) BS01 rna ? GO:0000028 ... P35997 37595043
    802233 8evs:Bc (2.62) BS01 C ? GO:0003735 ... N/A 37595043
    802234 8evs:Bc (2.62) BS02 G ? GO:0003735 ... N/A 37595043
    802235 8evs:Bc (2.62) BS03 C ? GO:0003735 ... N/A 37595043
    802236 8evs:Bc (2.62) BS04 U ? GO:0003735 ... N/A 37595043
    802237 8evs:Bd (2.62) BS01 U ? GO:0003735 ... N/A 37595043
    802238 8evs:Bd (2.62) BS02 G ? GO:0003735 ... N/A 37595043
    802239 8evs:Bd (2.62) BS03 A ? GO:0003735 ... N/A 37595043
    802240 8evs:Bd (2.62) BS04 C ? GO:0003735 ... N/A 37595043
    802241 8evs:Bd (2.62) BS05 G ? GO:0003735 ... N/A 37595043
    802242 8evs:Bd (2.62) BS06 C ? GO:0003735 ... N/A 37595043
    802243 8evs:Bd (2.62) BS07 U ? GO:0003735 ... N/A 37595043
    802244 8evs:Bd (2.62) BS08 U ? GO:0003735 ... N/A 37595043
    802245 8evs:Bd (2.62) BS09 C ? GO:0003735 ... N/A 37595043
    802246 8evs:Bd (2.62) BS10 A ? GO:0003735 ... N/A 37595043
    802247 8evs:Be (2.62) BS01 rna ? GO:0002181 ... P0CX33 37595043
    802248 8evs:Bf (2.62) BS01 U ? GO:0003735 ... N/A 37595043
    802249 8evs:Bf (2.62) BS02 U ? GO:0003735 ... N/A 37595043
    802250 8evs:Bf (2.62) BS03 C ? GO:0003735 ... N/A 37595043
    802251 8evs:Bf (2.62) BS04 U ? GO:0003735 ... N/A 37595043
    802252 8evs:Bf (2.62) BS05 G ? GO:0003735 ... N/A 37595043
    802253 8evs:Bf (2.62) BS06 A ? GO:0003735 ... N/A 37595043
    802254 8evs:Bf (2.62) BS07 C ? GO:0003735 ... N/A 37595043
    802255 8evs:Bg (2.62) BS01 C ? GO:0001965 ... P38011 37595043
    802256 8evs:Bg (2.62) BS02 A ? GO:0001965 ... P38011 37595043
    802257 8evs:Bg (2.62) BS03 G ? GO:0001965 ... P38011 37595043
    802258 8evs:DC (2.62) BS01 rna 3.6.5.- GO:0003746 ... P32324 37595043
    802259 8evs:DC (2.62) BS02 rna 3.6.5.- GO:0003746 ... P32324 37595043
    802260 8evs:DC (2.62) BS03 G 3.6.5.- GO:0003746 ... P32324 37595043
    802261 8evs:DC (2.62) BS04 U 3.6.5.- GO:0003746 ... P32324 37595043
    802262 8evs:DC (2.62) BS05 GDP 3.6.5.- GO:0003746 ... P32324 37595043
    802263 8evs:E (2.62) BS01 rna ? GO:0003723 ... N/A 37595043
    802264 8evs:E (2.62) BS02 rna ? GO:0003723 ... N/A 37595043
    802265 8evs:V (2.62) BS01 rna ? GO:0000027 ... P05317 37595043
    802266 8evt:AA (2.2) BS01 rna ? GO:0002181 ... P0CX45 37595043
    802267 8evt:AA (2.2) BS02 rna ? GO:0002181 ... P0CX45 37595043
    802268 8evt:AB (2.2) BS01 rna ? GO:0000027 ... P14126 37595043
    802269 8evt:AB (2.2) BS02 MG ? GO:0000027 ... P14126 37595043
    802270 8evt:AC (2.2) BS01 rna ? GO:0003735 ... N/A 37595043
    802271 8evt:AC (2.2) BS02 rna ? GO:0003735 ... N/A 37595043
    802272 8evt:AC (2.2) BS03 MG ? GO:0003735 ... N/A 37595043
    802273 8evt:AD (2.2) BS01 rna ? GO:0003735 ... N/A 37595043
    802274 8evt:AD (2.2) BS02 rna ? GO:0003735 ... N/A 37595043
    802275 8evt:AE (2.2) BS01 rna ? GO:0000027 ... Q02326 37595043
    802276 8evt:AF (2.2) BS01 rna ? GO:0000463 ... P05737 37595043
    802277 8evt:AF (2.2) BS02 rna ? GO:0000463 ... P05737 37595043
    802278 8evt:AG (2.2) BS01 rna ? GO:0000470 ... P17076 37595043
    802279 8evt:AG (2.2) BS02 rna ? GO:0000470 ... P17076 37595043
    802280 8evt:AH (2.2) BS01 rna ? GO:0002181 ... P05738 37595043
    802281 8evt:AI (2.2) BS01 rna ? GO:0003735 ... N/A 37595043
    802282 8evt:AI (2.2) BS02 rna ? GO:0003735 ... N/A 37595043
    802283 8evt:AJ (2.2) BS01 rna ? GO:0003735 ... N/A 37595043
    802284 8evt:AJ (2.2) BS02 rna ? GO:0003735 ... N/A 37595043
    802285 8evt:AL (2.2) BS01 rna ? GO:0002181 ... Q12690 37595043
    802286 8evt:AL (2.2) BS02 rna ? GO:0002181 ... Q12690 37595043
    802287 8evt:AM (2.2) BS01 rna ? GO:0000027 ... P36105 37595043
    802288 8evt:AN (2.2) BS01 rna ? GO:0000470 ... P05748 37595043
    802289 8evt:AN (2.2) BS02 rna ? GO:0000470 ... P05748 37595043
    802290 8evt:AN (2.2) BS03 MG ? GO:0000470 ... P05748 37595043
    802291 8evt:AN (2.2) BS04 MG ? GO:0000470 ... P05748 37595043
    802292 8evt:AO (2.2) BS01 rna ? GO:0000470 ... P26784 37595043
    802293 8evt:AO (2.2) BS02 MG ? GO:0000470 ... P26784 37595043
    802294 8evt:AP (2.2) BS01 rna ? GO:0000448 ... P05740 37595043
    802295 8evt:AP (2.2) BS02 rna ? GO:0000448 ... P05740 37595043
    802296 8evt:AQ (2.2) BS01 rna ? GO:0002181 ... P0CX49 37595043
    802297 8evt:AR (2.2) BS01 rna ? GO:0002181 ... P0CX82 37595043
    802298 8evt:AR (2.2) BS02 rna ? GO:0002181 ... P0CX82 37595043
    802299 8evt:AS (2.2) BS01 rna ? GO:0003735 ... B3LMD0 37595043
    802300 8evt:AS (2.2) BS02 rna ? GO:0003735 ... B3LMD0 37595043
    802301 8evt:AT (2.2) BS01 rna ? GO:0002181 ... Q02753 37595043
    802302 8evt:AT (2.2) BS02 rna ? GO:0002181 ... Q02753 37595043
    802303 8evt:AU (2.2) BS01 rna ? GO:0002181 ... P05749 37595043
    802304 8evt:AV (2.2) BS01 rna ? GO:0002181 ... P0CX41 37595043
    802305 8evt:AW (2.2) BS01 rna ? GO:0003735 ... N/A 37595043
    802306 8evt:AX (2.2) BS01 rna ? GO:0000027 ... P04456 37595043
    802307 8evt:AX (2.2) BS02 rna ? GO:0000027 ... P04456 37595043
    802308 8evt:AY (2.2) BS01 rna ? GO:0002181 ... P05743 37595043
    802309 8evt:AY (2.2) BS02 rna ? GO:0002181 ... P05743 37595043
    802310 8evt:AZ (2.2) BS01 rna ? GO:0002181 ... P0C2H6 37595043
    802311 8evt:Aa (2.2) BS01 rna ? GO:0002181 ... P02406 37595043
    802312 8evt:Ab (2.2) BS01 rna ? GO:0003735 ... N/A 37595043
    802313 8evt:Ac (2.2) BS01 rna ? GO:0002181 ... P14120 37595043
    802314 8evt:Ad (2.2) BS01 rna ? GO:0002181 ... P0C2H8 37595043
    802315 8evt:Ae (2.2) BS01 rna ? GO:0003735 ... N/A 37595043
    802316 8evt:Ae (2.2) BS02 MG ? GO:0003735 ... N/A 37595043
    802317 8evt:Af (2.2) BS01 rna ? GO:0000027 ... P05744 37595043
    802318 8evt:Af (2.2) BS02 MG ? GO:0000027 ... P05744 37595043
    802319 8evt:Af (2.2) BS03 MG ? GO:0000027 ... P05744 37595043
    802320 8evt:Ag (2.2) BS01 rna ? GO:0002181 ... P87262 37595043
    802321 8evt:Ah (2.2) BS01 rna ? GO:0000463 ... P0CX84 37595043
    802322 8evt:Ah (2.2) BS02 rna ? GO:0000463 ... P0CX84 37595043
    802323 8evt:Ai (2.2) BS01 rna ? GO:0000470 ... P05745 37595043
    802324 8evt:Aj (2.2) BS01 rna ? GO:0000448 ... P49166 37595043
    802325 8evt:Aj (2.2) BS02 rna ? GO:0000448 ... P49166 37595043
    802326 8evt:Aj (2.2) BS03 MG ? GO:0000448 ... P49166 37595043
    802327 8evt:Ak (2.2) BS01 rna ? GO:0003735 ... N/A 37595043
    802328 8evt:Al (2.2) BS01 rna ? GO:0002181 ... P04650 37595043
    802329 8evt:Al (2.2) BS02 rna ? GO:0002181 ... P04650 37595043
    802330 8evt:Al (2.2) BS03 MG ? GO:0002181 ... P04650 37595043
    802331 8evt:Am (2.2) BS01 rna ? GO:0000027 ... P0CH08 37595043
    802332 8evt:Ao (2.2) BS01 rna ? GO:0002181 ... P0CX27 37595043
    802333 8evt:Ao (2.2) BS02 ZN ? GO:0002181 ... P0CX27 37595043
    802334 8evt:Ap (2.2) BS01 rna ? GO:0002181 ... P0CX25 37595043
    802335 8evt:BA (2.2) BS01 G ? GO:0000028 ... P32905 37595043
    802336 8evt:BA (2.2) BS02 A ? GO:0000028 ... P32905 37595043
    802337 8evt:BB (2.2) BS01 rna ? GO:0003735 ... N/A 37595043
    802338 8evt:BB (2.2) BS02 U ? GO:0003735 ... N/A 37595043
    802339 8evt:BC (2.2) BS01 rna ? GO:0003723 ... N/A 37595043
    802340 8evt:BC (2.2) BS02 U ? GO:0003723 ... N/A 37595043
    802341 8evt:BC (2.2) BS03 U ? GO:0003723 ... N/A 37595043
    802342 8evt:BC (2.2) BS04 A ? GO:0003723 ... N/A 37595043
    802343 8evt:BC (2.2) BS05 A ? GO:0003723 ... N/A 37595043
    802344 8evt:BD (2.2) BS01 A ? GO:0003723 ... N/A 37595043
    802345 8evt:BD (2.2) BS02 U ? GO:0003723 ... N/A 37595043
    802346 8evt:BD (2.2) BS03 G ? GO:0003723 ... N/A 37595043
    802347 8evt:BD (2.2) BS04 C ? GO:0003723 ... N/A 37595043
    802348 8evt:BD (2.2) BS05 G ? GO:0003723 ... N/A 37595043
    802349 8evt:BD (2.2) BS06 A ? GO:0003723 ... N/A 37595043
    802350 8evt:BD (2.2) BS07 C ? GO:0003723 ... N/A 37595043
    802351 8evt:BD (2.2) BS08 U ? GO:0003723 ... N/A 37595043
    802352 8evt:BD (2.2) BS09 U ? GO:0003723 ... N/A 37595043
    802353 8evt:BD (2.2) BS10 A ? GO:0003723 ... N/A 37595043
    802354 8evt:BE (2.2) BS01 rna ? GO:0002181 ... P0CX35 37595043
    802355 8evt:BF (2.2) BS01 rna ? GO:0003723 ... A0A1L4AA68 37595043
    802356 8evt:BF (2.2) BS02 rna ? GO:0003723 ... A0A1L4AA68 37595043
    802357 8evt:BF (2.2) BS03 A ? GO:0003723 ... A0A1L4AA68 37595043
    802358 8evt:BF (2.2) BS04 C ? GO:0003723 ... A0A1L4AA68 37595043
    802359 8evt:BF (2.2) BS05 U ? GO:0003723 ... A0A1L4AA68 37595043
    802360 8evt:BF (2.2) BS06 U ? GO:0003723 ... A0A1L4AA68 37595043
    802361 8evt:BF (2.2) BS07 G ? GO:0003723 ... A0A1L4AA68 37595043
    802362 8evt:BF (2.2) BS08 A ? GO:0003723 ... A0A1L4AA68 37595043
    802363 8evt:BF (2.2) BS09 U ? GO:0003723 ... A0A1L4AA68 37595043
    802364 8evt:BF (2.2) BS10 A ? GO:0003723 ... A0A1L4AA68 37595043
    802365 8evt:BF (2.2) BS11 C ? GO:0003723 ... A0A1L4AA68 37595043
    802366 8evt:BF (2.2) BS12 MG ? GO:0003723 ... A0A1L4AA68 37595043
    802367 8evt:BG (2.2) BS01 rna ? GO:0000462 ... P0CX37 37595043
    802368 8evt:BG (2.2) BS02 A ? GO:0000462 ... P0CX37 37595043
    802369 8evt:BG (2.2) BS03 U ? GO:0000462 ... P0CX37 37595043
    802370 8evt:BG (2.2) BS04 G ? GO:0000462 ... P0CX37 37595043
    802371 8evt:BH (2.2) BS01 rna ? GO:0002181 ... P26786 37595043
    802372 8evt:BI (2.2) BS01 rna ? GO:0000462 ... P0CX39 37595043
    802373 8evt:BI (2.2) BS02 rna ? GO:0000462 ... P0CX39 37595043
    802374 8evt:BI (2.2) BS03 U ? GO:0000462 ... P0CX39 37595043
    802375 8evt:BI (2.2) BS04 C ? GO:0000462 ... P0CX39 37595043
    802376 8evt:BI (2.2) BS05 A ? GO:0000462 ... P0CX39 37595043
    802377 8evt:BI (2.2) BS06 A ? GO:0000462 ... P0CX39 37595043
    802378 8evt:BJ (2.2) BS01 rna ? GO:0000462 ... O13516 37595043
    802379 8evt:BK (2.2) BS01 A ? GO:0000054 ... Q08745 37595043
    802380 8evt:BK (2.2) BS02 A ? GO:0000054 ... Q08745 37595043
    802381 8evt:BK (2.2) BS03 U ? GO:0000054 ... Q08745 37595043
    802382 8evt:BK (2.2) BS04 G ? GO:0000054 ... Q08745 37595043
    802383 8evt:BL (2.2) BS01 rna ? GO:0000028 ... P0CX47 37595043
    802384 8evt:BM (2.2) BS01 A ? GO:0003735 ... N/A 37595043
    802385 8evt:BM (2.2) BS02 G ? GO:0003735 ... N/A 37595043
    802386 8evt:BM (2.2) BS03 G ? GO:0003735 ... N/A 37595043
    802387 8evt:BM (2.2) BS04 G ? GO:0003735 ... N/A 37595043
    802388 8evt:BN (2.2) BS01 rna ? GO:0000462 ... P05756 37595043
    802389 8evt:BN (2.2) BS02 rna ? GO:0000462 ... P05756 37595043
    802390 8evt:BN (2.2) BS03 MG ? GO:0000462 ... P05756 37595043
    802391 8evt:BO (2.2) BS01 rna ? GO:0000028 ... P06367 37595043
    802392 8evt:BO (2.2) BS02 G ? GO:0000028 ... P06367 37595043
    802393 8evt:BO (2.2) BS03 C ? GO:0000028 ... P06367 37595043
    802394 8evt:BO (2.2) BS04 U ? GO:0000028 ... P06367 37595043
    802395 8evt:BO (2.2) BS05 U ? GO:0000028 ... P06367 37595043
    802396 8evt:BO (2.2) BS06 G ? GO:0000028 ... P06367 37595043
    802397 8evt:BP (2.2) BS01 rna ? GO:0003723 ... N/A 37595043
    802398 8evt:BP (2.2) BS02 G ? GO:0003723 ... N/A 37595043
    802399 8evt:BP (2.2) BS03 G ? GO:0003723 ... N/A 37595043
    802400 8evt:BP (2.2) BS04 G ? GO:0003723 ... N/A 37595043

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).