SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    802401 8fc5:15 (2.65) BS01 rna ? GO:0003735 ... P80339 37452045
    802402 8fc5:15 (2.65) BS02 MG ? GO:0003735 ... P80339 37452045
    802403 8fc5:15 (2.65) BS03 MG ? GO:0003735 ... P80339 37452045
    802404 8fc5:15 (2.65) BS04 ZN ? GO:0003735 ... P80339 37452045
    802405 8fc5:16 (2.65) BS01 rna ? GO:0000049 ... P35871 37452045
    802406 8fc5:16 (2.65) BS02 ZN ? GO:0000049 ... P35871 37452045
    802407 8fc5:17 (2.65) BS01 rna ? GO:0003735 ... P80340 37452045
    802408 8fc5:17 (2.65) BS02 MG ? GO:0003735 ... P80340 37452045
    802409 8fc5:17 (2.65) BS03 MG ? GO:0003735 ... P80340 37452045
    802410 8fc5:17 (2.65) BS04 MG ? GO:0003735 ... P80340 37452045
    802411 8fc5:17 (2.65) BS05 MG ? GO:0003735 ... P80340 37452045
    802412 8fc5:18 (2.65) BS01 rna ? GO:0003735 ... Q5SKU1 37452045
    802413 8fc5:18 (2.65) BS02 MG ? GO:0003735 ... Q5SKU1 37452045
    802414 8fc5:18 (2.65) BS03 MG ? GO:0003735 ... Q5SKU1 37452045
    802415 8fc5:19 (2.65) BS01 rna ? GO:0003735 ... Q5SHR2 37452045
    802416 8fc5:19 (2.65) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    802417 8fc5:1D (2.65) BS01 rna ? GO:0002181 ... P60405 37452045
    802418 8fc5:1D (2.65) BS02 rna ? GO:0002181 ... P60405 37452045
    802419 8fc5:1D (2.65) BS03 MG ? GO:0002181 ... P60405 37452045
    802420 8fc5:1D (2.65) BS04 MG ? GO:0002181 ... P60405 37452045
    802421 8fc5:1D (2.65) BS05 MG ? GO:0002181 ... P60405 37452045
    802422 8fc5:1D (2.65) BS06 MG ? GO:0002181 ... P60405 37452045
    802423 8fc5:1D (2.65) BS07 MG ? GO:0002181 ... P60405 37452045
    802424 8fc5:1D (2.65) BS08 MG ? GO:0002181 ... P60405 37452045
    802425 8fc5:1D (2.65) BS09 MG ? GO:0002181 ... P60405 37452045
    802426 8fc5:1D (2.65) BS10 MG ? GO:0002181 ... P60405 37452045
    802427 8fc5:1D (2.65) BS11 MG ? GO:0002181 ... P60405 37452045
    802428 8fc5:1D (2.65) BS12 MG ? GO:0002181 ... P60405 37452045
    802429 8fc5:1E (2.65) BS01 rna ? GO:0003735 ... Q5SHN8 37452045
    802430 8fc5:1E (2.65) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    802431 8fc5:1E (2.65) BS03 MG ? GO:0003735 ... Q5SHN8 37452045
    802432 8fc5:1E (2.65) BS04 MG ? GO:0003735 ... Q5SHN8 37452045
    802433 8fc5:1E (2.65) BS05 MG ? GO:0003735 ... Q5SHN8 37452045
    802434 8fc5:1F (2.65) BS01 rna ? GO:0003735 ... Q5SHN9 37452045
    802435 8fc5:1F (2.65) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    802436 8fc5:1F (2.65) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    802437 8fc5:1F (2.65) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    802438 8fc5:1F (2.65) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    802439 8fc5:1F (2.65) BS06 MG ? GO:0003735 ... Q5SHN9 37452045
    802440 8fc5:1F (2.65) BS07 MG ? GO:0003735 ... Q5SHN9 37452045
    802441 8fc5:1F (2.65) BS08 MG ? GO:0003735 ... Q5SHN9 37452045
    802442 8fc5:1F (2.65) BS09 MG ? GO:0003735 ... Q5SHN9 37452045
    802443 8fc5:1F (2.65) BS10 MG ? GO:0003735 ... Q5SHN9 37452045
    802444 8fc5:1F (2.65) BS11 MG ? GO:0003735 ... Q5SHN9 37452045
    802445 8fc5:1F (2.65) BS12 MG ? GO:0003735 ... Q5SHN9 37452045
    802446 8fc5:1F (2.65) BS13 MG ? GO:0003735 ... Q5SHN9 37452045
    802447 8fc5:1F (2.65) BS14 MG ? GO:0003735 ... Q5SHN9 37452045
    802448 8fc5:1F (2.65) BS15 MG ? GO:0003735 ... Q5SHN9 37452045
    802449 8fc5:1F (2.65) BS16 ARG ? GO:0003735 ... Q5SHN9 37452045
    802450 8fc5:1G (2.65) BS01 rna ? GO:0000049 ... Q5SHQ0 37452045
    802451 8fc5:1G (2.65) BS02 rna ? GO:0000049 ... Q5SHQ0 37452045
    802452 8fc5:1G (2.65) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    802453 8fc5:1G (2.65) BS04 MG ? GO:0000049 ... Q5SHQ0 37452045
    802454 8fc5:1H (2.65) BS01 rna ? GO:0002181 ... P0DOY8 37452045
    802455 8fc5:1I (2.65) BS01 rna ? GO:0003735 ... Q5SLQ1 37452045
    802456 8fc5:1N (2.65) BS01 rna ? GO:0003729 ... P60488 37452045
    802457 8fc5:1N (2.65) BS02 MG ? GO:0003729 ... P60488 37452045
    802458 8fc5:1N (2.65) BS03 MG ? GO:0003729 ... P60488 37452045
    802459 8fc5:1O (2.65) BS01 rna ? GO:0003735 ... Q5SHP8 37452045
    802460 8fc5:1O (2.65) BS02 rna ? GO:0003735 ... Q5SHP8 37452045
    802461 8fc5:1P (2.65) BS01 rna ? GO:0003735 ... Q5SHQ7 37452045
    802462 8fc5:1P (2.65) BS02 MG ? GO:0003735 ... Q5SHQ7 37452045
    802463 8fc5:1P (2.65) BS03 MG ? GO:0003735 ... Q5SHQ7 37452045
    802464 8fc5:1P (2.65) BS04 MG ? GO:0003735 ... Q5SHQ7 37452045
    802465 8fc5:1Q (2.65) BS01 rna ? GO:0000049 ... P60489 37452045
    802466 8fc5:1Q (2.65) BS02 rna ? GO:0000049 ... P60489 37452045
    802467 8fc5:1Q (2.65) BS03 MG ? GO:0000049 ... P60489 37452045
    802468 8fc5:1Q (2.65) BS04 MG ? GO:0000049 ... P60489 37452045
    802469 8fc5:1Q (2.65) BS05 MG ? GO:0000049 ... P60489 37452045
    802470 8fc5:1R (2.65) BS01 rna ? GO:0003735 ... Q9Z9H5 37452045
    802471 8fc5:1R (2.65) BS02 MG ? GO:0003735 ... Q9Z9H5 37452045
    802472 8fc5:1R (2.65) BS03 MG ? GO:0003735 ... Q9Z9H5 37452045
    802473 8fc5:1R (2.65) BS04 MG ? GO:0003735 ... Q9Z9H5 37452045
    802474 8fc5:1R (2.65) BS05 MG ? GO:0003735 ... Q9Z9H5 37452045
    802475 8fc5:1S (2.65) BS01 rna ? GO:0003735 ... Q5SHQ4 37452045
    802476 8fc5:1S (2.65) BS02 rna ? GO:0003735 ... Q5SHQ4 37452045
    802477 8fc5:1T (2.65) BS01 rna ? GO:0003735 ... P60490 37452045
    802478 8fc5:1T (2.65) BS02 rna ? GO:0003735 ... P60490 37452045
    802479 8fc5:1T (2.65) BS03 MG ? GO:0003735 ... P60490 37452045
    802480 8fc5:1U (2.65) BS01 rna ? GO:0000027 ... P60491 37452045
    802481 8fc5:1U (2.65) BS02 MG ? GO:0000027 ... P60491 37452045
    802482 8fc5:1U (2.65) BS03 MG ? GO:0000027 ... P60491 37452045
    802483 8fc5:1U (2.65) BS04 MG ? GO:0000027 ... P60491 37452045
    802484 8fc5:1U (2.65) BS05 MG ? GO:0000027 ... P60491 37452045
    802485 8fc5:1U (2.65) BS06 MG ? GO:0000027 ... P60491 37452045
    802486 8fc5:1U (2.65) BS07 MG ? GO:0000027 ... P60491 37452045
    802487 8fc5:1V (2.65) BS01 rna ? GO:0003723 ... P60492 37452045
    802488 8fc5:1V (2.65) BS02 MG ? GO:0003723 ... P60492 37452045
    802489 8fc5:1V (2.65) BS03 MG ? GO:0003723 ... P60492 37452045
    802490 8fc5:1V (2.65) BS04 MG ? GO:0003723 ... P60492 37452045
    802491 8fc5:1W (2.65) BS01 rna ? GO:0003735 ... Q5SHP3 37452045
    802492 8fc5:1W (2.65) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    802493 8fc5:1X (2.65) BS01 rna ? GO:0003735 ... Q5SHP0 37452045
    802494 8fc5:1Y (2.65) BS01 rna ? GO:0003723 ... Q5SHP9 37452045
    802495 8fc5:1Y (2.65) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    802496 8fc5:1Z (2.65) BS01 rna ? GO:0003723 ... Q5SHZ1 37452045
    802497 8fc5:1Z (2.65) BS02 rna ? GO:0003723 ... Q5SHZ1 37452045
    802498 8fc5:1b (2.65) BS01 rna ? GO:0003735 ... P80371 37452045
    802499 8fc5:1b (2.65) BS02 MG ? GO:0003735 ... P80371 37452045
    802500 8fc5:1c (2.65) BS01 rna ? GO:0003676 ... P80372 37452045
    802501 8fc5:1d (2.65) BS01 rna ? GO:0003723 ... P80373 37452045
    802502 8fc5:1d (2.65) BS02 SF4 ? GO:0003723 ... P80373 37452045
    802503 8fc5:1e (2.65) BS01 rna ? GO:0003723 ... Q5SHQ5 37452045
    802504 8fc5:1e (2.65) BS02 MG ? GO:0003723 ... Q5SHQ5 37452045
    802505 8fc5:1f (2.65) BS01 rna ? GO:0003735 ... Q5SLP8 37452045
    802506 8fc5:1g (2.65) BS01 rna ? GO:0000049 ... P17291 37452045
    802507 8fc5:1h (2.65) BS01 rna ? GO:0003735 ... P0DOY9 37452045
    802508 8fc5:1i (2.65) BS01 rna ? GO:0000049 ... P80374 37452045
    802509 8fc5:1j (2.65) BS01 rna ? GO:0000049 ... Q5SHN7 37452045
    802510 8fc5:1k (2.65) BS01 rna ? GO:0003735 ... P80376 37452045
    802511 8fc5:1k (2.65) BS02 MG ? GO:0003735 ... P80376 37452045
    802512 8fc5:1l (2.65) BS01 rna ? GO:0000049 ... Q5SHN3 37452045
    802513 8fc5:1l (2.65) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    802514 8fc5:1m (2.65) BS01 rna ? GO:0000049 ... P80377 37452045
    802515 8fc5:1m (2.65) BS02 rna ? GO:0000049 ... P80377 37452045
    802516 8fc5:1m (2.65) BS03 MG ? GO:0000049 ... P80377 37452045
    802517 8fc5:1n (2.65) BS01 rna ? GO:0003735 ... P0DOY6 37452045
    802518 8fc5:1n (2.65) BS02 MG ? GO:0003735 ... P0DOY6 37452045
    802519 8fc5:1n (2.65) BS03 ZN ? GO:0003735 ... P0DOY6 37452045
    802520 8fc5:1o (2.65) BS01 rna ? GO:0003735 ... Q5SJ76 37452045
    802521 8fc5:1o (2.65) BS02 rna ? GO:0003735 ... Q5SJ76 37452045
    802522 8fc5:1p (2.65) BS01 rna ? GO:0003735 ... Q5SJH3 37452045
    802523 8fc5:1q (2.65) BS01 rna ? GO:0003735 ... P0DOY7 37452045
    802524 8fc5:1r (2.65) BS01 rna ? GO:0003735 ... Q5SLQ0 37452045
    802525 8fc5:1s (2.65) BS01 rna ? GO:0000028 ... Q5SHP2 37452045
    802526 8fc5:1t (2.65) BS01 rna ? GO:0003723 ... P80380 37452045
    802527 8fc5:1t (2.65) BS02 MG ? GO:0003723 ... P80380 37452045
    802528 8fc5:1y (2.65) BS01 rna ? GO:0005515 ... P0AD49 37452045
    802529 8fc5:1y (2.65) BS02 MG ? GO:0005515 ... P0AD49 37452045
    802530 8fc5:20 (2.65) BS01 rna ? GO:0003735 ... P60493 37452045
    802531 8fc5:20 (2.65) BS02 rna ? GO:0003735 ... P60493 37452045
    802532 8fc5:20 (2.65) BS03 MG ? GO:0003735 ... P60493 37452045
    802533 8fc5:21 (2.65) BS01 rna ? GO:0003735 ... P60494 37452045
    802534 8fc5:22 (2.65) BS01 rna ? GO:0003735 ... Q5SHP6 37452045
    802535 8fc5:23 (2.65) BS01 rna ? GO:0003735 ... Q5SHQ6 37452045
    802536 8fc5:23 (2.65) BS02 rna ? GO:0003735 ... Q5SHQ6 37452045
    802537 8fc5:23 (2.65) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    802538 8fc5:24 (2.65) BS01 rna ? GO:0003735 ... Q5SJE1 37452045
    802539 8fc5:24 (2.65) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    802540 8fc5:25 (2.65) BS01 rna ? GO:0003735 ... P80339 37452045
    802541 8fc5:25 (2.65) BS02 MG ? GO:0003735 ... P80339 37452045
    802542 8fc5:25 (2.65) BS03 ZN ? GO:0003735 ... P80339 37452045
    802543 8fc5:26 (2.65) BS01 rna ? GO:0000049 ... P35871 37452045
    802544 8fc5:26 (2.65) BS02 ZN ? GO:0000049 ... P35871 37452045
    802545 8fc5:27 (2.65) BS01 rna ? GO:0003735 ... P80340 37452045
    802546 8fc5:27 (2.65) BS02 MG ? GO:0003735 ... P80340 37452045
    802547 8fc5:27 (2.65) BS03 MG ? GO:0003735 ... P80340 37452045
    802548 8fc5:28 (2.65) BS01 rna ? GO:0003735 ... Q5SKU1 37452045
    802549 8fc5:29 (2.65) BS01 rna ? GO:0003735 ... Q5SHR2 37452045
    802550 8fc5:29 (2.65) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    802551 8fc5:2D (2.65) BS01 rna ? GO:0002181 ... P60405 37452045
    802552 8fc5:2D (2.65) BS02 rna ? GO:0002181 ... P60405 37452045
    802553 8fc5:2D (2.65) BS03 MG ? GO:0002181 ... P60405 37452045
    802554 8fc5:2D (2.65) BS04 MG ? GO:0002181 ... P60405 37452045
    802555 8fc5:2D (2.65) BS05 MG ? GO:0002181 ... P60405 37452045
    802556 8fc5:2D (2.65) BS06 MG ? GO:0002181 ... P60405 37452045
    802557 8fc5:2D (2.65) BS07 MG ? GO:0002181 ... P60405 37452045
    802558 8fc5:2D (2.65) BS08 MG ? GO:0002181 ... P60405 37452045
    802559 8fc5:2D (2.65) BS09 MG ? GO:0002181 ... P60405 37452045
    802560 8fc5:2E (2.65) BS01 rna ? GO:0003735 ... Q5SHN8 37452045
    802561 8fc5:2E (2.65) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    802562 8fc5:2E (2.65) BS03 MG ? GO:0003735 ... Q5SHN8 37452045
    802563 8fc5:2F (2.65) BS01 rna ? GO:0003735 ... Q5SHN9 37452045
    802564 8fc5:2F (2.65) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    802565 8fc5:2F (2.65) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    802566 8fc5:2F (2.65) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    802567 8fc5:2F (2.65) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    802568 8fc5:2G (2.65) BS01 rna ? GO:0000049 ... Q5SHQ0 37452045
    802569 8fc5:2G (2.65) BS02 rna ? GO:0000049 ... Q5SHQ0 37452045
    802570 8fc5:2G (2.65) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    802571 8fc5:2H (2.65) BS01 rna ? GO:0002181 ... P0DOY8 37452045
    802572 8fc5:2I (2.65) BS01 rna ? GO:0003735 ... Q5SLQ1 37452045
    802573 8fc5:2N (2.65) BS01 rna ? GO:0003729 ... P60488 37452045
    802574 8fc5:2O (2.65) BS01 rna ? GO:0003735 ... Q5SHP8 37452045
    802575 8fc5:2O (2.65) BS02 rna ? GO:0003735 ... Q5SHP8 37452045
    802576 8fc5:2P (2.65) BS01 rna ? GO:0003735 ... Q5SHQ7 37452045
    802577 8fc5:2Q (2.65) BS01 rna ? GO:0000049 ... P60489 37452045
    802578 8fc5:2Q (2.65) BS02 rna ? GO:0000049 ... P60489 37452045
    802579 8fc5:2Q (2.65) BS03 MG ? GO:0000049 ... P60489 37452045
    802580 8fc5:2R (2.65) BS01 rna ? GO:0003735 ... Q9Z9H5 37452045
    802581 8fc5:2S (2.65) BS01 rna ? GO:0003735 ... Q5SHQ4 37452045
    802582 8fc5:2S (2.65) BS02 rna ? GO:0003735 ... Q5SHQ4 37452045
    802583 8fc5:2T (2.65) BS01 rna ? GO:0003735 ... P60490 37452045
    802584 8fc5:2T (2.65) BS02 rna ? GO:0003735 ... P60490 37452045
    802585 8fc5:2U (2.65) BS01 rna ? GO:0000027 ... P60491 37452045
    802586 8fc5:2V (2.65) BS01 rna ? GO:0003723 ... P60492 37452045
    802587 8fc5:2V (2.65) BS02 MG ? GO:0003723 ... P60492 37452045
    802588 8fc5:2V (2.65) BS03 MG ? GO:0003723 ... P60492 37452045
    802589 8fc5:2W (2.65) BS01 rna ? GO:0003735 ... Q5SHP3 37452045
    802590 8fc5:2W (2.65) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    802591 8fc5:2W (2.65) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    802592 8fc5:2X (2.65) BS01 rna ? GO:0003735 ... Q5SHP0 37452045
    802593 8fc5:2Y (2.65) BS01 rna ? GO:0003723 ... Q5SHP9 37452045
    802594 8fc5:2Y (2.65) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    802595 8fc5:2Z (2.65) BS01 rna ? GO:0003723 ... Q5SHZ1 37452045
    802596 8fc5:2Z (2.65) BS02 rna ? GO:0003723 ... Q5SHZ1 37452045
    802597 8fc5:2b (2.65) BS01 rna ? GO:0003735 ... P80371 37452045
    802598 8fc5:2c (2.65) BS01 rna ? GO:0003676 ... P80372 37452045
    802599 8fc5:2d (2.65) BS01 rna ? GO:0003723 ... P80373 37452045
    802600 8fc5:2d (2.65) BS02 SF4 ? GO:0003723 ... P80373 37452045

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).