SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    802601 8fc5:2e (2.65) BS01 rna ? GO:0003723 ... Q5SHQ5 37452045
    802602 8fc5:2f (2.65) BS01 rna ? GO:0003735 ... Q5SLP8 37452045
    802603 8fc5:2f (2.65) BS02 MG ? GO:0003735 ... Q5SLP8 37452045
    802604 8fc5:2g (2.65) BS01 rna ? GO:0000049 ... P17291 37452045
    802605 8fc5:2h (2.65) BS01 rna ? GO:0003735 ... P0DOY9 37452045
    802606 8fc5:2i (2.65) BS01 rna ? GO:0000049 ... P80374 37452045
    802607 8fc5:2j (2.65) BS01 rna ? GO:0000049 ... Q5SHN7 37452045
    802608 8fc5:2k (2.65) BS01 rna ? GO:0003735 ... P80376 37452045
    802609 8fc5:2k (2.65) BS02 MG ? GO:0003735 ... P80376 37452045
    802610 8fc5:2l (2.65) BS01 rna ? GO:0000049 ... Q5SHN3 37452045
    802611 8fc5:2l (2.65) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    802612 8fc5:2m (2.65) BS01 rna ? GO:0000049 ... P80377 37452045
    802613 8fc5:2n (2.65) BS01 rna ? GO:0003735 ... P0DOY6 37452045
    802614 8fc5:2n (2.65) BS02 ZN ? GO:0003735 ... P0DOY6 37452045
    802615 8fc5:2o (2.65) BS01 rna ? GO:0003735 ... Q5SJ76 37452045
    802616 8fc5:2o (2.65) BS02 rna ? GO:0003735 ... Q5SJ76 37452045
    802617 8fc5:2p (2.65) BS01 rna ? GO:0003735 ... Q5SJH3 37452045
    802618 8fc5:2q (2.65) BS01 rna ? GO:0003735 ... P0DOY7 37452045
    802619 8fc5:2r (2.65) BS01 rna ? GO:0003735 ... Q5SLQ0 37452045
    802620 8fc5:2s (2.65) BS01 rna ? GO:0000028 ... Q5SHP2 37452045
    802621 8fc5:2t (2.65) BS01 rna ? GO:0003723 ... P80380 37452045
    802622 8fc5:2t (2.65) BS02 MG ? GO:0003723 ... P80380 37452045
    802623 8fc5:2y (2.65) BS01 rna ? GO:0005515 ... P0AD49 37452045
    802624 8fc6:10 (2.35) BS01 rna ? N/A N/A 37452045
    802625 8fc6:10 (2.35) BS02 rna ? N/A N/A 37452045
    802626 8fc6:10 (2.35) BS03 MG ? N/A N/A 37452045
    802627 8fc6:10 (2.35) BS04 MG ? N/A N/A 37452045
    802628 8fc6:11 (2.35) BS01 rna ? N/A N/A 37452045
    802629 8fc6:11 (2.35) BS02 MG ? N/A N/A 37452045
    802630 8fc6:12 (2.35) BS01 rna ? N/A N/A 37452045
    802631 8fc6:13 (2.35) BS01 rna ? N/A N/A 37452045
    802632 8fc6:13 (2.35) BS02 rna ? N/A N/A 37452045
    802633 8fc6:13 (2.35) BS03 MG ? N/A N/A 37452045
    802634 8fc6:13 (2.35) BS04 MG ? N/A N/A 37452045
    802635 8fc6:13 (2.35) BS05 MG ? N/A N/A 37452045
    802636 8fc6:14 (2.35) BS01 rna ? N/A N/A 37452045
    802637 8fc6:14 (2.35) BS02 ZN ? N/A N/A 37452045
    802638 8fc6:15 (2.35) BS01 rna ? N/A N/A 37452045
    802639 8fc6:15 (2.35) BS02 MG ? N/A N/A 37452045
    802640 8fc6:15 (2.35) BS03 MG ? N/A N/A 37452045
    802641 8fc6:15 (2.35) BS04 ZN ? N/A N/A 37452045
    802642 8fc6:16 (2.35) BS01 rna ? N/A N/A 37452045
    802643 8fc6:16 (2.35) BS02 ZN ? N/A N/A 37452045
    802644 8fc6:17 (2.35) BS01 rna ? N/A N/A 37452045
    802645 8fc6:17 (2.35) BS02 MG ? N/A N/A 37452045
    802646 8fc6:17 (2.35) BS03 MG ? N/A N/A 37452045
    802647 8fc6:17 (2.35) BS04 MG ? N/A N/A 37452045
    802648 8fc6:17 (2.35) BS05 MG ? N/A N/A 37452045
    802649 8fc6:18 (2.35) BS01 rna ? N/A N/A 37452045
    802650 8fc6:18 (2.35) BS02 MG ? N/A N/A 37452045
    802651 8fc6:18 (2.35) BS03 MG ? N/A N/A 37452045
    802652 8fc6:19 (2.35) BS01 rna ? N/A N/A 37452045
    802653 8fc6:19 (2.35) BS02 ZN ? N/A N/A 37452045
    802654 8fc6:1D (2.35) BS01 rna ? N/A N/A 37452045
    802655 8fc6:1D (2.35) BS02 rna ? N/A N/A 37452045
    802656 8fc6:1D (2.35) BS03 MG ? N/A N/A 37452045
    802657 8fc6:1D (2.35) BS04 MG ? N/A N/A 37452045
    802658 8fc6:1D (2.35) BS05 MG ? N/A N/A 37452045
    802659 8fc6:1D (2.35) BS06 MG ? N/A N/A 37452045
    802660 8fc6:1D (2.35) BS07 MG ? N/A N/A 37452045
    802661 8fc6:1D (2.35) BS08 MG ? N/A N/A 37452045
    802662 8fc6:1D (2.35) BS09 MG ? N/A N/A 37452045
    802663 8fc6:1D (2.35) BS10 MG ? N/A N/A 37452045
    802664 8fc6:1D (2.35) BS11 MG ? N/A N/A 37452045
    802665 8fc6:1E (2.35) BS01 rna ? N/A N/A 37452045
    802666 8fc6:1E (2.35) BS02 MG ? N/A N/A 37452045
    802667 8fc6:1E (2.35) BS03 MG ? N/A N/A 37452045
    802668 8fc6:1E (2.35) BS04 MG ? N/A N/A 37452045
    802669 8fc6:1E (2.35) BS05 MG ? N/A N/A 37452045
    802670 8fc6:1F (2.35) BS01 rna ? N/A N/A 37452045
    802671 8fc6:1F (2.35) BS02 MG ? N/A N/A 37452045
    802672 8fc6:1F (2.35) BS03 MG ? N/A N/A 37452045
    802673 8fc6:1F (2.35) BS04 MG ? N/A N/A 37452045
    802674 8fc6:1F (2.35) BS05 MG ? N/A N/A 37452045
    802675 8fc6:1F (2.35) BS06 MG ? N/A N/A 37452045
    802676 8fc6:1F (2.35) BS07 MG ? N/A N/A 37452045
    802677 8fc6:1F (2.35) BS08 MG ? N/A N/A 37452045
    802678 8fc6:1F (2.35) BS09 MG ? N/A N/A 37452045
    802679 8fc6:1F (2.35) BS10 MG ? N/A N/A 37452045
    802680 8fc6:1F (2.35) BS11 MG ? N/A N/A 37452045
    802681 8fc6:1F (2.35) BS12 MG ? N/A N/A 37452045
    802682 8fc6:1F (2.35) BS13 MG ? N/A N/A 37452045
    802683 8fc6:1F (2.35) BS14 MG ? N/A N/A 37452045
    802684 8fc6:1F (2.35) BS15 ARG ? N/A N/A 37452045
    802685 8fc6:1G (2.35) BS01 rna ? N/A N/A 37452045
    802686 8fc6:1G (2.35) BS02 rna ? N/A N/A 37452045
    802687 8fc6:1G (2.35) BS03 MG ? N/A N/A 37452045
    802688 8fc6:1G (2.35) BS04 MG ? N/A N/A 37452045
    802689 8fc6:1H (2.35) BS01 rna ? N/A N/A 37452045
    802690 8fc6:1I (2.35) BS01 rna ? N/A N/A 37452045
    802691 8fc6:1N (2.35) BS01 rna ? N/A N/A 37452045
    802692 8fc6:1N (2.35) BS02 MG ? N/A N/A 37452045
    802693 8fc6:1N (2.35) BS03 MG ? N/A N/A 37452045
    802694 8fc6:1O (2.35) BS01 rna ? N/A N/A 37452045
    802695 8fc6:1O (2.35) BS02 rna ? N/A N/A 37452045
    802696 8fc6:1P (2.35) BS01 rna ? N/A N/A 37452045
    802697 8fc6:1P (2.35) BS02 MG ? N/A N/A 37452045
    802698 8fc6:1P (2.35) BS03 MG ? N/A N/A 37452045
    802699 8fc6:1Q (2.35) BS01 rna ? N/A N/A 37452045
    802700 8fc6:1Q (2.35) BS02 rna ? N/A N/A 37452045
    802701 8fc6:1Q (2.35) BS03 MG ? N/A N/A 37452045
    802702 8fc6:1Q (2.35) BS04 MG ? N/A N/A 37452045
    802703 8fc6:1Q (2.35) BS05 MG ? N/A N/A 37452045
    802704 8fc6:1Q (2.35) BS06 MG ? N/A N/A 37452045
    802705 8fc6:1Q (2.35) BS07 MG ? N/A N/A 37452045
    802706 8fc6:1R (2.35) BS01 rna ? N/A N/A 37452045
    802707 8fc6:1R (2.35) BS02 MG ? N/A N/A 37452045
    802708 8fc6:1R (2.35) BS03 MG ? N/A N/A 37452045
    802709 8fc6:1R (2.35) BS04 MG ? N/A N/A 37452045
    802710 8fc6:1S (2.35) BS01 rna ? N/A N/A 37452045
    802711 8fc6:1S (2.35) BS02 rna ? N/A N/A 37452045
    802712 8fc6:1T (2.35) BS01 rna ? N/A N/A 37452045
    802713 8fc6:1T (2.35) BS02 rna ? N/A N/A 37452045
    802714 8fc6:1U (2.35) BS01 rna ? N/A N/A 37452045
    802715 8fc6:1U (2.35) BS02 MG ? N/A N/A 37452045
    802716 8fc6:1U (2.35) BS03 MG ? N/A N/A 37452045
    802717 8fc6:1U (2.35) BS04 MG ? N/A N/A 37452045
    802718 8fc6:1U (2.35) BS05 MG ? N/A N/A 37452045
    802719 8fc6:1U (2.35) BS06 MG ? N/A N/A 37452045
    802720 8fc6:1U (2.35) BS07 MG ? N/A N/A 37452045
    802721 8fc6:1V (2.35) BS01 rna ? N/A N/A 37452045
    802722 8fc6:1V (2.35) BS02 MG ? N/A N/A 37452045
    802723 8fc6:1V (2.35) BS03 MG ? N/A N/A 37452045
    802724 8fc6:1V (2.35) BS04 MG ? N/A N/A 37452045
    802725 8fc6:1W (2.35) BS01 rna ? N/A N/A 37452045
    802726 8fc6:1W (2.35) BS02 MG ? N/A N/A 37452045
    802727 8fc6:1W (2.35) BS03 MG ? N/A N/A 37452045
    802728 8fc6:1X (2.35) BS01 rna ? N/A N/A 37452045
    802729 8fc6:1Y (2.35) BS01 rna ? N/A N/A 37452045
    802730 8fc6:1Y (2.35) BS02 ZN ? N/A N/A 37452045
    802731 8fc6:1Z (2.35) BS01 rna ? N/A N/A 37452045
    802732 8fc6:1Z (2.35) BS02 rna ? N/A N/A 37452045
    802733 8fc6:1b (2.35) BS01 rna ? N/A N/A 37452045
    802734 8fc6:1b (2.35) BS02 MG ? N/A N/A 37452045
    802735 8fc6:1c (2.35) BS01 rna ? N/A N/A 37452045
    802736 8fc6:1d (2.35) BS01 rna ? N/A N/A 37452045
    802737 8fc6:1d (2.35) BS02 SF4 ? N/A N/A 37452045
    802738 8fc6:1e (2.35) BS01 rna ? N/A N/A 37452045
    802739 8fc6:1e (2.35) BS02 MG ? N/A N/A 37452045
    802740 8fc6:1f (2.35) BS01 rna ? N/A N/A 37452045
    802741 8fc6:1g (2.35) BS01 rna ? N/A N/A 37452045
    802742 8fc6:1h (2.35) BS01 rna ? N/A N/A 37452045
    802743 8fc6:1i (2.35) BS01 rna ? N/A N/A 37452045
    802744 8fc6:1j (2.35) BS01 rna ? N/A N/A 37452045
    802745 8fc6:1k (2.35) BS01 rna ? N/A N/A 37452045
    802746 8fc6:1k (2.35) BS02 MG ? N/A N/A 37452045
    802747 8fc6:1l (2.35) BS01 rna ? N/A N/A 37452045
    802748 8fc6:1l (2.35) BS02 MG ? N/A N/A 37452045
    802749 8fc6:1m (2.35) BS01 rna ? N/A N/A 37452045
    802750 8fc6:1m (2.35) BS02 MG ? N/A N/A 37452045
    802751 8fc6:1n (2.35) BS01 rna ? N/A N/A 37452045
    802752 8fc6:1n (2.35) BS02 ZN ? N/A N/A 37452045
    802753 8fc6:1o (2.35) BS01 rna ? N/A N/A 37452045
    802754 8fc6:1o (2.35) BS02 rna ? N/A N/A 37452045
    802755 8fc6:1p (2.35) BS01 rna ? N/A N/A 37452045
    802756 8fc6:1q (2.35) BS01 rna ? N/A N/A 37452045
    802757 8fc6:1r (2.35) BS01 rna ? N/A N/A 37452045
    802758 8fc6:1s (2.35) BS01 rna ? N/A N/A 37452045
    802759 8fc6:1t (2.35) BS01 rna ? N/A N/A 37452045
    802760 8fc6:1t (2.35) BS02 MG ? N/A N/A 37452045
    802761 8fc6:1y (2.35) BS01 rna ? N/A N/A 37452045
    802762 8fc6:1y (2.35) BS02 MG ? N/A N/A 37452045
    802763 8fc6:1y (2.35) BS03 MG ? N/A N/A 37452045
    802764 8fc6:20 (2.35) BS01 rna ? N/A N/A 37452045
    802765 8fc6:20 (2.35) BS02 rna ? N/A N/A 37452045
    802766 8fc6:21 (2.35) BS01 rna ? N/A N/A 37452045
    802767 8fc6:22 (2.35) BS01 rna ? N/A N/A 37452045
    802768 8fc6:23 (2.35) BS01 rna ? N/A N/A 37452045
    802769 8fc6:23 (2.35) BS02 rna ? N/A N/A 37452045
    802770 8fc6:24 (2.35) BS01 rna ? N/A N/A 37452045
    802771 8fc6:24 (2.35) BS02 ZN ? N/A N/A 37452045
    802772 8fc6:25 (2.35) BS01 rna ? N/A N/A 37452045
    802773 8fc6:25 (2.35) BS02 MG ? N/A N/A 37452045
    802774 8fc6:25 (2.35) BS03 MG ? N/A N/A 37452045
    802775 8fc6:25 (2.35) BS04 ZN ? N/A N/A 37452045
    802776 8fc6:26 (2.35) BS01 rna ? N/A N/A 37452045
    802777 8fc6:26 (2.35) BS02 ZN ? N/A N/A 37452045
    802778 8fc6:27 (2.35) BS01 rna ? N/A N/A 37452045
    802779 8fc6:27 (2.35) BS02 MG ? N/A N/A 37452045
    802780 8fc6:27 (2.35) BS03 MG ? N/A N/A 37452045
    802781 8fc6:28 (2.35) BS01 rna ? N/A N/A 37452045
    802782 8fc6:29 (2.35) BS01 rna ? N/A N/A 37452045
    802783 8fc6:29 (2.35) BS02 ZN ? N/A N/A 37452045
    802784 8fc6:2D (2.35) BS01 rna ? N/A N/A 37452045
    802785 8fc6:2D (2.35) BS02 rna ? N/A N/A 37452045
    802786 8fc6:2D (2.35) BS03 MG ? N/A N/A 37452045
    802787 8fc6:2D (2.35) BS04 MG ? N/A N/A 37452045
    802788 8fc6:2D (2.35) BS05 MG ? N/A N/A 37452045
    802789 8fc6:2D (2.35) BS06 MG ? N/A N/A 37452045
    802790 8fc6:2D (2.35) BS07 MG ? N/A N/A 37452045
    802791 8fc6:2D (2.35) BS08 MG ? N/A N/A 37452045
    802792 8fc6:2D (2.35) BS09 MG ? N/A N/A 37452045
    802793 8fc6:2E (2.35) BS01 rna ? N/A N/A 37452045
    802794 8fc6:2E (2.35) BS02 MG ? N/A N/A 37452045
    802795 8fc6:2E (2.35) BS03 MG ? N/A N/A 37452045
    802796 8fc6:2F (2.35) BS01 rna ? N/A N/A 37452045
    802797 8fc6:2F (2.35) BS02 MG ? N/A N/A 37452045
    802798 8fc6:2F (2.35) BS03 MG ? N/A N/A 37452045
    802799 8fc6:2F (2.35) BS04 MG ? N/A N/A 37452045
    802800 8fc6:2F (2.35) BS05 MG ? N/A N/A 37452045

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).