SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4006 4007 4008 4009 4010 4011 4012 4013 4014 4015 4016 4017 4018 4019 4020 4021 4022 4023 4024 4025 4026 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    803001 8fcp:E (3.52) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803002 8fcp:F (3.52) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803003 8fcp:F (3.52) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803004 8fcq:A (3.93) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803005 8fcq:A (3.93) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803006 8fcq:B (3.93) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803007 8fcq:B (3.93) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803008 8fcq:C (3.93) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803009 8fcq:C (3.93) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803010 8fcq:D (3.93) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803011 8fcq:D (3.93) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803012 8fcq:E (3.93) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803013 8fcq:E (3.93) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803014 8fcq:F (3.93) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803015 8fcq:F (3.93) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803016 8fcr:A (4.12) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803017 8fcr:A (4.12) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803018 8fcr:B (4.12) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803019 8fcr:B (4.12) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803020 8fcr:C (4.12) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803021 8fcr:C (4.12) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803022 8fcr:D (4.12) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803023 8fcr:D (4.12) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803024 8fcr:E (4.12) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803025 8fcr:E (4.12) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803026 8fcr:F (4.12) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803027 8fcr:F (4.12) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803028 8fct:A (3.42) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803029 8fct:A (3.42) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803030 8fct:B (3.42) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803031 8fct:B (3.42) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803032 8fct:C (3.42) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803033 8fct:C (3.42) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803034 8fct:D (3.42) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803035 8fct:D (3.42) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803036 8fct:E (3.42) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803037 8fct:E (3.42) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803038 8fct:F (3.42) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803039 8fct:F (3.42) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    803040 8fcu:A (3.19) BS01 rna ? GO:0051607 ... A0A235IG00 37557170
    803041 8fcu:A (3.19) BS02 dna ? GO:0051607 ... A0A235IG00 37557170
    803042 8fcu:B (3.19) BS01 rna ? N/A A0A235IH92 37557170
    803043 8fcu:C (3.19) BS01 rna ? N/A A0A235IG15 37557170
    803044 8fcu:C (3.19) BS02 dna ? N/A A0A235IG15 37557170
    803045 8fcu:D (3.19) BS01 rna ? N/A A0A235IG15 37557170
    803046 8fcu:D (3.19) BS02 dna ? N/A A0A235IG15 37557170
    803047 8fcu:E (3.19) BS01 rna ? N/A A0A235IG15 37557170
    803048 8fcu:E (3.19) BS02 dna ? N/A A0A235IG15 37557170
    803049 8fcu:F (3.19) BS01 rna ? N/A A0A235IG15 37557170
    803050 8fcu:F (3.19) BS02 dna ? N/A A0A235IG15 37557170
    803051 8fcu:G (3.19) BS01 rna ? N/A A0A235IG15 37557170
    803052 8fcu:G (3.19) BS02 dna ? N/A A0A235IG15 37557170
    803053 8fcu:H (3.19) BS01 rna ? N/A A0A235IG15 37557170
    803054 8fcu:H (3.19) BS02 dna ? N/A A0A235IG15 37557170
    803055 8fcu:I (3.19) BS01 dna ? GO:0051607 ... A0A235IGR9 37557170
    803056 8fcu:I (3.19) BS02 dna ? GO:0051607 ... A0A235IGR9 37557170
    803057 8fcu:J (3.19) BS01 dna ? N/A A0A235IGR9 37557170
    803058 8fcu:J (3.19) BS02 dna ? N/A A0A235IGR9 37557170
    803059 8fcu:K (3.19) BS01 dna ? N/A A0A235IGR9 37557170
    803060 8fcu:L (3.19) BS01 dna ? N/A A0A235IGR9 37557170
    803061 8fcu:P (3.19) BS01 dna ? N/A A0A235IFP5 37557170
    803062 8fcu:P (3.19) BS02 dna ? N/A A0A235IFP5 37557170
    803063 8fcu:Q (3.19) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803064 8fcv:P (2.95) BS01 dna ? N/A A0A235IFP5 37557170
    803065 8fcv:P (2.95) BS02 dna ? N/A A0A235IFP5 37557170
    803066 8fcv:Q (2.95) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803067 8fcv:R (2.95) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803068 8fcv:R (2.95) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803069 8fcv:S (2.95) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803070 8fcv:S (2.95) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803071 8fcv:T (2.95) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803072 8fcv:T (2.95) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803073 8fcv:U (2.95) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803074 8fcv:V (2.95) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803075 8fcv:V (2.95) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803076 8fcv:W (2.95) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803077 8fcv:W (2.95) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803078 8fcw:R (2.87) BS01 dna ? GO:0016887 ... A0A235IFM2 37557170
    803079 8fcw:R (2.87) BS02 dna ? GO:0016887 ... A0A235IFM2 37557170
    803080 8fcw:R (2.87) BS03 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803081 8fcw:S (2.87) BS01 dna ? GO:0016887 ... A0A235IFM2 37557170
    803082 8fcw:S (2.87) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803083 8fcw:S (2.87) BS03 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803084 8fcw:T (2.87) BS01 dna ? GO:0016887 ... A0A235IFM2 37557170
    803085 8fcw:T (2.87) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803086 8fcw:T (2.87) BS03 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803087 8fcw:U (2.87) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803088 8fcw:V (2.87) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803089 8fcw:V (2.87) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803090 8fcx:R (3.04) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803091 8fcx:S (3.04) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803092 8fcx:S (3.04) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803093 8fcx:T (3.04) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803094 8fcx:T (3.04) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803095 8fcx:U (3.04) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803096 8fcx:V (3.04) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803097 8fcx:V (3.04) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    803098 8fcy:A (3.4) BS01 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    803099 8fcy:A (3.4) BS02 ATP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    803100 8fcy:A (3.4) BS03 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    803101 8fcy:A (3.4) BS04 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    803102 8fcz:A (3.7) BS01 RET ? GO:0000139 ... P02699 37626045
    803103 8fcz:B (3.7) BS01 RET ? GO:0000139 ... P02699 37626045
    803104 8fcz:C (3.7) BS01 BMA N/A N/A N/A 37626045
    803105 8fcz:C (3.7) BS02 MAN N/A N/A N/A 37626045
    803106 8fd0:C (3.71) BS01 BMA N/A N/A N/A 37626045
    803107 8fd0:D (3.71) BS01 BMA N/A N/A N/A 37626045
    803108 8fd1:C (4.25) BS01 BMA N/A N/A N/A 37626045
    803109 8fd1:C (4.25) BS02 MAN N/A N/A N/A 37626045
    803110 8fd2:A (3.65) BS01 rna ? GO:0051607 ... A0A235IG00 37557170
    803111 8fd2:B (3.65) BS01 rna ? N/A A0A235IH92 37557170
    803112 8fd2:C (3.65) BS01 rna ? N/A A0A235IG15 37557170
    803113 8fd2:D (3.65) BS01 rna ? N/A A0A235IG15 37557170
    803114 8fd2:E (3.65) BS01 rna ? N/A A0A235IG15 37557170
    803115 8fd2:F (3.65) BS01 rna ? N/A A0A235IG15 37557170
    803116 8fd2:G (3.65) BS01 rna ? N/A A0A235IG15 37557170
    803117 8fd2:H (3.65) BS01 rna ? N/A A0A235IG15 37557170
    803118 8fd3:A (3.12) BS01 rna ? GO:0051607 ... A0A235IG00 37557170
    803119 8fd3:A (3.12) BS02 dna ? GO:0051607 ... A0A235IG00 37557170
    803120 8fd3:B (3.12) BS01 rna ? N/A A0A235IH92 37557170
    803121 8fd3:C (3.12) BS01 rna ? N/A A0A235IG15 37557170
    803122 8fd3:D (3.12) BS01 rna ? N/A A0A235IG15 37557170
    803123 8fd3:E (3.12) BS01 rna ? N/A A0A235IG15 37557170
    803124 8fd3:F (3.12) BS01 rna ? N/A A0A235IG15 37557170
    803125 8fd3:G (3.12) BS01 rna ? N/A A0A235IG15 37557170
    803126 8fd3:H (3.12) BS01 rna ? N/A A0A235IG15 37557170
    803127 8fd3:I (3.12) BS01 dna ? GO:0051607 ... A0A235IGR9 37557170
    803128 8fd3:I (3.12) BS02 dna ? GO:0051607 ... A0A235IGR9 37557170
    803129 8fd6:A (2.9) BS01 ATP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    803130 8fd6:A (2.9) BS02 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    803131 8fd6:A (2.9) BS03 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    803132 8fd6:A (2.9) BS04 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    803133 8fd7:D (3.1) BS01 GBN ? N/A P13806 36973510
    803134 8fd7:D (3.1) BS02 CA ? N/A P13806 36973510
    803135 8fd7:K (3.1) BS01 WO9 ? GO:0005216 ... Q13936 36973510
    803136 8fd7:K (3.1) BS02 YSW ? GO:0005216 ... Q13936 36973510
    803137 8fd7:K (3.1) BS03 CLR ? GO:0005216 ... Q13936 36973510
    803138 8fd7:K (3.1) BS04 CLR ? GO:0005216 ... Q13936 36973510
    803139 8fd7:K (3.1) BS05 CA ? GO:0005216 ... Q13936 36973510
    803140 8fd8:A (3.3) BS01 NAI 1.1.1.-
    1.1.1.141
    1.1.1.232
    GO:0001822 ... P15428 36774348
    803141 8fd8:B (3.3) BS01 NAI 1.1.1.-
    1.1.1.141
    1.1.1.232
    GO:0001822 ... P15428 36774348
    803142 8fd9:A (1.7) BS01 XQQ 2.7.10.2 GO:0004672 ... P35991 37651403
    803143 8fda:A (2.2) BS01 HEM 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    803144 8fda:A (2.2) BS02 XPK 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    803145 8fda:B (2.2) BS01 HEM 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    803146 8fda:B (2.2) BS02 XPK 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    803147 8fda:C (2.2) BS01 HEM 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    803148 8fda:C (2.2) BS02 XPK 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    803149 8fda:C (2.2) BS03 XPK 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    803150 8fda:D (2.2) BS01 HEM 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    803151 8fda:D (2.2) BS02 XPK 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    803152 8fda:D (2.2) BS03 XPK 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    803153 8fdb:A (3.06) BS01 AGP 2.6.1.16 GO:0004360 ... Q12KP2 37145875
    803154 8fdb:A (3.06) BS02 AGP 2.6.1.16 GO:0004360 ... Q12KP2 37145875
    803155 8fdb:A (3.06) BS03 MG 2.6.1.16 GO:0004360 ... Q12KP2 37145875
    803156 8fdb:A (3.06) BS04 MG 2.6.1.16 GO:0004360 ... Q12KP2 37145875
    803157 8fdb:A (3.06) BS05 AGP 2.6.1.16 GO:0004360 ... Q12KP2 37145875
    803158 8fdb:B (3.06) BS01 AGP 2.6.1.16 GO:0004360 ... Q12KP2 37145875
    803159 8fdb:B (3.06) BS02 AGP 2.6.1.16 GO:0004360 ... Q12KP2 37145875
    803160 8fdb:B (3.06) BS03 AGP 2.6.1.16 GO:0004360 ... Q12KP2 37145875
    803161 8fdc:A (1.8) BS01 peptide N/A N/A N/A 38007690
    803162 8fdc:B (1.8) BS01 peptide N/A N/A N/A 38007690
    803163 8fdd:A (1.54) BS01 peptide N/A N/A N/A 38007690
    803164 8fdd:B (1.54) BS01 peptide N/A N/A N/A 38007690
    803165 8fdj:A (1.75) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37406385
    803166 8fdj:A (1.75) BS02 NBE 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37406385
    803167 8fdk:A (1.89) BS01 HEM ? GO:0004601 ... P69905 37406385
    803168 8fdk:B (1.89) BS01 HEM ? GO:0004601 ... P68871 37406385
    803169 8fdk:B (1.89) BS02 NBE ? GO:0004601 ... P68871 37406385
    803170 8fdk:B (1.89) BS03 NBE ? GO:0004601 ... P68871 37406385
    803171 8fdk:C (1.89) BS01 HEM ? GO:0004601 ... P69905 37406385
    803172 8fdk:D (1.89) BS01 HEM ? GO:0004601 ... P68871 37406385
    803173 8fdk:D (1.89) BS02 NBE ? GO:0004601 ... P68871 37406385
    803174 8fdk:D (1.89) BS03 NBE ? GO:0004601 ... P68871 37406385
    803175 8fdl:A (1.75) BS01 HEM ? GO:0004601 ... P69905 37406385
    803176 8fdl:B (1.75) BS01 HEM ? GO:0004601 ... P68871 37406385
    803177 8fdl:C (1.75) BS01 HEM ? GO:0004601 ... P69905 37406385
    803178 8fdl:C (1.75) BS02 XQU ? GO:0004601 ... P69905 37406385
    803179 8fdl:D (1.75) BS01 HEM ? GO:0004601 ... P68871 37406385
    803180 8fdm:A (1.91) BS01 HEM ? GO:0004601 ... P69905 37406385
    803181 8fdm:B (1.91) BS01 HEM ? GO:0004601 ... P68871 37406385
    803182 8fdm:B (1.91) BS02 NSM ? GO:0004601 ... P68871 37406385
    803183 8fdm:C (1.91) BS01 HEM ? GO:0004601 ... P69905 37406385
    803184 8fdm:D (1.91) BS01 HEM ? GO:0004601 ... P68871 37406385
    803185 8fdm:D (1.91) BS02 NSM ? GO:0004601 ... P68871 37406385
    803186 8fdn:A (2.2) BS01 HEM ? GO:0004601 ... P69905 37406385
    803187 8fdn:B (2.2) BS01 HEM ? GO:0004601 ... P68871 37406385
    803188 8fdn:B (2.2) BS02 XQZ ? GO:0004601 ... P68871 37406385
    803189 8fdn:C (2.2) BS01 HEM ? GO:0004601 ... P69905 37406385
    803190 8fdn:D (2.2) BS01 HEM ? GO:0004601 ... P68871 37406385
    803191 8fdn:D (2.2) BS02 XQZ ? GO:0004601 ... P68871 37406385
    803192 8fdt:A (3.2) BS01 ATP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    803193 8fdt:A (3.2) BS02 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    803194 8fdt:A (3.2) BS03 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    803195 8fdt:A (3.2) BS04 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    803196 8fdu:A (3.3) BS01 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    803197 8fdu:A (3.3) BS02 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    803198 8fdv:A (2.95) BS01 peptide 1.14.99.66 GO:0000122 ... O60341 N/A
    803199 8fdv:A (2.95) BS02 HUF 1.14.99.66 GO:0000122 ... O60341 N/A
    803200 8fdx:A (2.07) BS01 GAR 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 37200803

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).