SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4008 4009 4010 4011 4012 4013 4014 4015 4016 4017 4018 4019 4020 4021 4022 4023 4024 4025 4026 4027 4028 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    803401 8ffc:M (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    803402 8ffc:M (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    803403 8ffc:M (1.85) BS03 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    803404 8ffc:N (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    803405 8ffc:N (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    803406 8ffc:O (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    803407 8ffc:O (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    803408 8ffc:P (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    803409 8ffc:P (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    803410 8ffc:P (1.85) BS03 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    803411 8ffd:A (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    803412 8ffd:B (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    803413 8ffd:C (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    803414 8ffd:D (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    803415 8ffd:E (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    803416 8ffd:F (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    803417 8ffd:G (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    803418 8ffd:H (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    803419 8ffd:I (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    803420 8ffd:J (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    803421 8ffd:K (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    803422 8ffd:L (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    803423 8ffd:M (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    803424 8ffd:N (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    803425 8ffd:O (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    803426 8ffd:P (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    803427 8fff:A (1.92) BS01 ACT 6.3.2.4 GO:0003824 ... W8TRT0 38293037
    803428 8fff:A (1.92) BS02 ACT 6.3.2.4 GO:0003824 ... W8TRT0 38293037
    803429 8ffi:A (2.7) BS01 rna ? GO:0007165 ... A0A316E683 37494956
    803430 8ffi:A (2.7) BS02 dna ? GO:0007165 ... A0A316E683 37494956
    803431 8ffi:B (2.7) BS01 rna ? GO:0003676 ... A0A316E3U6 37494956
    803432 8ffi:B (2.7) BS02 dna ? GO:0003676 ... A0A316E3U6 37494956
    803433 8ffi:E (2.7) BS01 rna ? GO:0007165 ... A0A316E683 37494956
    803434 8ffi:E (2.7) BS02 dna ? GO:0007165 ... A0A316E683 37494956
    803435 8ffi:F (2.7) BS01 rna ? GO:0003676 ... A0A316E3U6 37494956
    803436 8ffi:F (2.7) BS02 dna ? GO:0003676 ... A0A316E3U6 37494956
    803437 8ffi:F (2.7) BS03 MG ? GO:0003676 ... A0A316E3U6 37494956
    803438 8ffi:I (2.7) BS01 rna ? GO:0007165 ... A0A316E683 37494956
    803439 8ffi:I (2.7) BS02 dna ? GO:0007165 ... A0A316E683 37494956
    803440 8ffi:L (2.7) BS01 rna ? GO:0003676 ... A0A316E3U6 37494956
    803441 8ffi:L (2.7) BS02 dna ? GO:0003676 ... A0A316E3U6 37494956
    803442 8ffi:L (2.7) BS03 MG ? GO:0003676 ... A0A316E3U6 37494956
    803443 8ffi:M (2.7) BS01 rna ? GO:0007165 ... A0A316E683 37494956
    803444 8ffi:M (2.7) BS02 dna ? GO:0007165 ... A0A316E683 37494956
    803445 8ffi:N (2.7) BS01 rna ? GO:0003676 ... A0A316E3U6 37494956
    803446 8ffi:N (2.7) BS02 dna ? GO:0003676 ... A0A316E3U6 37494956
    803447 8ffi:N (2.7) BS03 MG ? GO:0003676 ... A0A316E3U6 37494956
    803448 8ffm:A (2.9) BS01 FZ4 ? GO:0005216 ... Q9WUD2 38225355
    803449 8ffm:B (2.9) BS01 FZ4 ? GO:0005216 ... Q9WUD2 38225355
    803450 8ffm:C (2.9) BS01 FZ4 ? GO:0005216 ... Q9WUD2 38225355
    803451 8ffm:D (2.9) BS01 FZ4 ? GO:0005216 ... Q9WUD2 38225355
    803452 8ffn:A (2.96) BS01 R2R ? GO:0005216 ... Q9XSM3 38225355
    803453 8ffn:A (2.96) BS02 ERG ? GO:0005216 ... Q9XSM3 38225355
    803454 8ffn:A (2.96) BS03 ERG ? GO:0005216 ... Q9XSM3 38225355
    803455 8ffn:A (2.96) BS04 ERG ? GO:0005216 ... Q9XSM3 38225355
    803456 8ffn:A (2.96) BS05 ERG ? GO:0005216 ... Q9XSM3 38225355
    803457 8ffn:B (2.96) BS01 R2R ? GO:0005216 ... Q9XSM3 38225355
    803458 8ffn:B (2.96) BS02 ERG ? GO:0005216 ... Q9XSM3 38225355
    803459 8ffn:B (2.96) BS03 ERG ? GO:0005216 ... Q9XSM3 38225355
    803460 8ffn:B (2.96) BS04 ERG ? GO:0005216 ... Q9XSM3 38225355
    803461 8ffn:B (2.96) BS05 ERG ? GO:0005216 ... Q9XSM3 38225355
    803462 8ffn:C (2.96) BS01 R2R ? GO:0005216 ... Q9XSM3 38225355
    803463 8ffn:C (2.96) BS02 ERG ? GO:0005216 ... Q9XSM3 38225355
    803464 8ffn:C (2.96) BS03 ERG ? GO:0005216 ... Q9XSM3 38225355
    803465 8ffn:C (2.96) BS04 ERG ? GO:0005216 ... Q9XSM3 38225355
    803466 8ffn:C (2.96) BS05 ERG ? GO:0005216 ... Q9XSM3 38225355
    803467 8ffn:D (2.96) BS01 R2R ? GO:0005216 ... Q9XSM3 38225355
    803468 8ffn:D (2.96) BS02 ERG ? GO:0005216 ... Q9XSM3 38225355
    803469 8ffn:D (2.96) BS03 ERG ? GO:0005216 ... Q9XSM3 38225355
    803470 8ffn:D (2.96) BS04 ERG ? GO:0005216 ... Q9XSM3 38225355
    803471 8ffn:D (2.96) BS05 ERG ? GO:0005216 ... Q9XSM3 38225355
    803472 8ffo:A (3.5) BS01 ERG ? GO:0005216 ... Q9XSM3 37735536
    803473 8ffo:A (3.5) BS02 CPL ? GO:0005216 ... Q9XSM3 37735536
    803474 8ffo:A (3.5) BS03 CPL ? GO:0005216 ... Q9XSM3 37735536
    803475 8ffo:A (3.5) BS04 ERG ? GO:0005216 ... Q9XSM3 37735536
    803476 8ffo:A (3.5) BS05 PIO ? GO:0005216 ... Q9XSM3 37735536
    803477 8ffo:A (3.5) BS06 CPL ? GO:0005216 ... Q9XSM3 37735536
    803478 8ffo:A (3.5) BS07 CPL ? GO:0005216 ... Q9XSM3 37735536
    803479 8ffo:B (3.5) BS01 CPL ? GO:0005216 ... Q9XSM3 37735536
    803480 8ffo:B (3.5) BS02 ERG ? GO:0005216 ... Q9XSM3 37735536
    803481 8ffo:B (3.5) BS03 CPL ? GO:0005216 ... Q9XSM3 37735536
    803482 8ffo:B (3.5) BS04 CPL ? GO:0005216 ... Q9XSM3 37735536
    803483 8ffo:B (3.5) BS05 ERG ? GO:0005216 ... Q9XSM3 37735536
    803484 8ffo:B (3.5) BS06 PIO ? GO:0005216 ... Q9XSM3 37735536
    803485 8ffo:B (3.5) BS07 CPL ? GO:0005216 ... Q9XSM3 37735536
    803486 8ffo:C (3.5) BS01 CPL ? GO:0005216 ... Q9XSM3 37735536
    803487 8ffo:C (3.5) BS02 ERG ? GO:0005216 ... Q9XSM3 37735536
    803488 8ffo:C (3.5) BS03 CPL ? GO:0005216 ... Q9XSM3 37735536
    803489 8ffo:C (3.5) BS04 CPL ? GO:0005216 ... Q9XSM3 37735536
    803490 8ffo:C (3.5) BS05 ERG ? GO:0005216 ... Q9XSM3 37735536
    803491 8ffo:C (3.5) BS06 PIO ? GO:0005216 ... Q9XSM3 37735536
    803492 8ffo:C (3.5) BS07 CPL ? GO:0005216 ... Q9XSM3 37735536
    803493 8ffo:D (3.5) BS01 CPL ? GO:0005216 ... Q9XSM3 37735536
    803494 8ffo:D (3.5) BS02 CPL ? GO:0005216 ... Q9XSM3 37735536
    803495 8ffo:D (3.5) BS03 ERG ? GO:0005216 ... Q9XSM3 37735536
    803496 8ffo:D (3.5) BS04 CPL ? GO:0005216 ... Q9XSM3 37735536
    803497 8ffo:D (3.5) BS05 CPL ? GO:0005216 ... Q9XSM3 37735536
    803498 8ffo:D (3.5) BS06 ERG ? GO:0005216 ... Q9XSM3 37735536
    803499 8ffo:D (3.5) BS07 PIO ? GO:0005216 ... Q9XSM3 37735536
    803500 8ffq:A (2.65) BS01 ERG ? GO:0005216 ... Q9XSM3 38225355
    803501 8ffq:A (2.65) BS02 ERG ? GO:0005216 ... Q9XSM3 38225355
    803502 8ffq:A (2.65) BS03 R2R ? GO:0005216 ... Q9XSM3 38225355
    803503 8ffq:A (2.65) BS04 CPL ? GO:0005216 ... Q9XSM3 38225355
    803504 8ffq:A (2.65) BS05 CPL ? GO:0005216 ... Q9XSM3 38225355
    803505 8ffq:A (2.65) BS06 ERG ? GO:0005216 ... Q9XSM3 38225355
    803506 8ffq:A (2.65) BS07 ERG ? GO:0005216 ... Q9XSM3 38225355
    803507 8ffq:B (2.65) BS01 ERG ? GO:0005216 ... Q9XSM3 38225355
    803508 8ffq:B (2.65) BS02 ERG ? GO:0005216 ... Q9XSM3 38225355
    803509 8ffq:B (2.65) BS03 R2R ? GO:0005216 ... Q9XSM3 38225355
    803510 8ffq:B (2.65) BS04 CPL ? GO:0005216 ... Q9XSM3 38225355
    803511 8ffq:B (2.65) BS05 ERG ? GO:0005216 ... Q9XSM3 38225355
    803512 8ffq:B (2.65) BS06 ERG ? GO:0005216 ... Q9XSM3 38225355
    803513 8ffq:B (2.65) BS07 CPL ? GO:0005216 ... Q9XSM3 38225355
    803514 8ffq:C (2.65) BS01 R2R ? GO:0005216 ... Q9XSM3 38225355
    803515 8ffq:C (2.65) BS02 ERG ? GO:0005216 ... Q9XSM3 38225355
    803516 8ffq:C (2.65) BS03 ERG ? GO:0005216 ... Q9XSM3 38225355
    803517 8ffq:C (2.65) BS04 CPL ? GO:0005216 ... Q9XSM3 38225355
    803518 8ffq:C (2.65) BS05 ERG ? GO:0005216 ... Q9XSM3 38225355
    803519 8ffq:C (2.65) BS06 ERG ? GO:0005216 ... Q9XSM3 38225355
    803520 8ffq:C (2.65) BS07 CPL ? GO:0005216 ... Q9XSM3 38225355
    803521 8ffq:D (2.65) BS01 R2R ? GO:0005216 ... Q9XSM3 38225355
    803522 8ffq:D (2.65) BS02 ERG ? GO:0005216 ... Q9XSM3 38225355
    803523 8ffq:D (2.65) BS03 ERG ? GO:0005216 ... Q9XSM3 38225355
    803524 8ffq:D (2.65) BS04 CPL ? GO:0005216 ... Q9XSM3 38225355
    803525 8ffq:D (2.65) BS05 CPL ? GO:0005216 ... Q9XSM3 38225355
    803526 8ffq:D (2.65) BS06 ERG ? GO:0005216 ... Q9XSM3 38225355
    803527 8ffq:D (2.65) BS07 ERG ? GO:0005216 ... Q9XSM3 38225355
    803528 8ffr:A (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803529 8ffr:B (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803530 8ffr:C (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803531 8ffr:D (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803532 8ffr:E (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803533 8ffr:F (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803534 8ffr:G (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803535 8ffr:H (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803536 8ffr:I (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803537 8ffr:J (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803538 8ffr:K (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803539 8ffr:L (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803540 8ffr:M (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803541 8ffr:N (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803542 8ffr:O (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803543 8ffr:P (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803544 8ffr:Q (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803545 8ffr:R (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803546 8ffr:S (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803547 8ffr:T (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803548 8ffr:U (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803549 8ffr:V (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    803550 8ffs:A (2.96) BS01 ERY ? GO:0005886 ... W9B4M6 37067435
    803551 8fft:A (2.1) BS01 MG N/A GO:0009058 ... N/A 37497377
    803552 8fft:A (2.1) BS02 MG N/A GO:0009058 ... N/A 37497377
    803553 8fft:B (2.1) BS01 MG N/A GO:0009058 ... N/A 37497377
    803554 8fft:C (2.1) BS01 MG N/A GO:0009058 ... N/A 37497377
    803555 8fft:D (2.1) BS01 MG N/A GO:0009058 ... N/A 37497377
    803556 8ffu:A (2.04) BS01 MG N/A GO:0009058 ... N/A 37497377
    803557 8ffu:A (2.04) BS02 XUR N/A GO:0009058 ... N/A 37497377
    803558 8ffu:B (2.04) BS01 MG N/A GO:0009058 ... N/A 37497377
    803559 8ffu:C (2.04) BS01 MG N/A GO:0009058 ... N/A 37497377
    803560 8ffu:C (2.04) BS02 XUR N/A GO:0009058 ... N/A 37497377
    803561 8ffu:D (2.04) BS01 MG N/A GO:0009058 ... N/A 37497377
    803562 8ffv:A (3.01) BS01 ATP 3.6.4.10 GO:0001764 ... P07900 37945740
    803563 8ffv:B (3.01) BS01 ATP 3.6.4.10 GO:0001764 ... P07900 37945740
    803564 8ffv:C (3.01) BS01 DEX ? GO:0003700 ... P04150 37945740
    803565 8ffw:A (3.23) BS01 ATP 3.6.4.10 GO:0001764 ... P07900 37945740
    803566 8ffw:A (3.23) BS02 MG 3.6.4.10 GO:0001764 ... P07900 37945740
    803567 8ffw:B (3.23) BS01 ATP 3.6.4.10 GO:0001764 ... P07900 37945740
    803568 8ffw:B (3.23) BS02 MG 3.6.4.10 GO:0001764 ... P07900 37945740
    803569 8ffw:C (3.23) BS01 DEX ? GO:0003700 ... P04150 37945740
    803570 8ffx:A (2.42) BS01 XU9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 37049868
    803571 8ffy:A (3.6) BS01 rna 6.1.1.11 GO:0000049 ... Q9NP81 37558671
    803572 8ffy:A (3.6) BS02 SSA 6.1.1.11 GO:0000049 ... Q9NP81 37558671
    803573 8ffy:B (3.6) BS01 rna 6.1.1.11 GO:0000049 ... Q9NP81 37558671
    803574 8ffy:B (3.6) BS02 SSA 6.1.1.11 GO:0000049 ... Q9NP81 37558671
    803575 8ffz:A (3.8) BS01 dna ? GO:0000978 ... P39933 37402369
    803576 8ffz:A (3.8) BS02 dna ? GO:0000978 ... P39933 37402369
    803577 8ffz:A (3.8) BS03 ZN ? GO:0000978 ... P39933 37402369
    803578 8ffz:A (3.8) BS04 ZN ? GO:0000978 ... P39933 37402369
    803579 8ffz:A (3.8) BS05 ZN ? GO:0000978 ... P39933 37402369
    803580 8ffz:A (3.8) BS06 ZN ? GO:0000978 ... P39933 37402369
    803581 8ffz:A (3.8) BS07 ZN ? GO:0000978 ... P39933 37402369
    803582 8ffz:A (3.8) BS08 ZN ? GO:0000978 ... P39933 37402369
    803583 8ffz:A (3.8) BS09 ZN ? GO:0000978 ... P39933 37402369
    803584 8ffz:A (3.8) BS10 ZN ? GO:0000978 ... P39933 37402369
    803585 8ffz:A (3.8) BS11 ZN ? GO:0000978 ... P39933 37402369
    803586 8ffz:B (3.8) BS01 dna ? GO:0000127 ... P34111 37402369
    803587 8ffz:B (3.8) BS02 dna ? GO:0000127 ... P34111 37402369
    803588 8ffz:C (3.8) BS01 dna ? GO:0000127 ... P33339 37402369
    803589 8ffz:C (3.8) BS02 dna ? GO:0000127 ... P33339 37402369
    803590 8ffz:E (3.8) BS01 dna ? GO:0000127 ... Q06339 37402369
    803591 8ffz:H (3.8) BS01 dna ? GO:0003677 ... P13393
    P29056
    37402369
    803592 8ffz:H (3.8) BS02 dna ? GO:0003677 ... P13393
    P29056
    37402369
    803593 8fg0:A (2.36) BS01 peptide N/A N/A N/A 37082831
    803594 8fg0:B (2.36) BS01 peptide N/A N/A N/A 37082831
    803595 8fg0:C (2.36) BS01 peptide N/A N/A N/A 37082831
    803596 8fg0:D (2.36) BS01 peptide N/A N/A N/A 37082831
    803597 8fg1:A (-1.00) BS01 peptide ? GO:0003779 ... O60610 37832872
    803598 8fg3:A (1.49) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 37615343
    803599 8fg3:A (1.49) BS02 MG 3.6.5.2 GO:0003924 ... P01112 37615343
    803600 8fg4:A (1.85) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 37615343

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).