SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    804601 8fkt:L9 (2.81) BS01 rna ? GO:0002181 ... P61313 37410842
    804602 8fkt:L9 (2.81) BS02 rna ? GO:0002181 ... P61313 37410842
    804603 8fkt:LA (2.81) BS01 rna ? GO:0002181 ... P18621 37410842
    804604 8fkt:LA (2.81) BS02 rna ? GO:0002181 ... P18621 37410842
    804605 8fkt:LB (2.81) BS01 rna ? GO:0002181 ... Q07020 37410842
    804606 8fkt:LC (2.81) BS01 rna ? GO:0002181 ... Q02543 37410842
    804607 8fkt:LE (2.81) BS01 rna ? GO:0002181 ... P46778 37410842
    804608 8fkt:LG (2.81) BS01 rna ? GO:0000122 ... P62829 37410842
    804609 8fkt:LH (2.81) BS01 rna ? GO:0002181 ... P62750 37410842
    804610 8fkt:LH (2.81) BS02 rna ? GO:0002181 ... P62750 37410842
    804611 8fkt:LI (2.81) BS01 rna ? GO:0002181 ... P61254 37410842
    804612 8fkt:LI (2.81) BS02 rna ? GO:0002181 ... P61254 37410842
    804613 8fkt:LK (2.81) BS01 rna ? GO:0002181 ... P46776 37410842
    804614 8fkt:LN (2.81) BS01 rna ? GO:0002181 ... P39023 37410842
    804615 8fkt:LQ (2.81) BS01 rna ? GO:0002181 ... P62910 37410842
    804616 8fkt:LQ (2.81) BS02 MG ? GO:0002181 ... P62910 37410842
    804617 8fkt:LS (2.81) BS01 rna ? GO:0000463 ... P42766 37410842
    804618 8fkt:LS (2.81) BS02 rna ? GO:0000463 ... P42766 37410842
    804619 8fkt:LT (2.81) BS01 rna ? GO:0000049 ... P18077 37410842
    804620 8fkt:LT (2.81) BS02 MG ? GO:0000049 ... P18077 37410842
    804621 8fkt:LU (2.81) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    804622 8fkt:LW (2.81) BS01 rna ? GO:0002181 ... P61927 37410842
    804623 8fkt:LW (2.81) BS02 rna ? GO:0002181 ... P61927 37410842
    804624 8fkt:LW (2.81) BS03 ZN ? GO:0002181 ... P61927 37410842
    804625 8fkt:NB (2.81) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    804626 8fkt:NF (2.81) BS01 rna ? GO:0000460 ... O95478 37410842
    804627 8fkt:NH (2.81) BS01 rna ? GO:0003723 ... Q9Y221 37410842
    804628 8fkt:NI (2.81) BS01 rna 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    804629 8fkt:NI (2.81) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    804630 8fkt:NK (2.81) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    804631 8fkt:NM (2.81) BS01 rna ? GO:0000460 ... Q9BXY0 37410842
    804632 8fkt:NM (2.81) BS02 SF4 ? GO:0000460 ... Q9BXY0 37410842
    804633 8fkt:NO (2.81) BS01 rna ? GO:0003723 ... P56182 37410842
    804634 8fkt:NQ (2.81) BS01 rna ? GO:0000176 ... Q6RFH5 37410842
    804635 8fkt:NS (2.81) BS01 rna ? GO:0000460 ... Q9H9Y2 37410842
    804636 8fkt:NS (2.81) BS02 rna ? GO:0000460 ... Q9H9Y2 37410842
    804637 8fkt:SA (2.81) BS01 rna ? GO:0002181 ... P36578 37410842
    804638 8fkt:SA (2.81) BS02 rna ? GO:0002181 ... P36578 37410842
    804639 8fkt:SC (2.81) BS01 rna ? GO:0002181 ... Q02878 37410842
    804640 8fkt:SD (2.81) BS01 rna ? GO:0000463 ... P18124 37410842
    804641 8fkt:SE (2.81) BS01 rna ? GO:0000470 ... P62424 37410842
    804642 8fkt:SE (2.81) BS02 rna ? GO:0000470 ... P62424 37410842
    804643 8fkt:SE (2.81) BS03 rna ? GO:0000470 ... P62424 37410842
    804644 8fkt:SG (2.81) BS01 rna ? GO:0002181 ... P32969 37410842
    804645 8fkt:SH (2.81) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    804646 8fkt:SI (2.81) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    804647 8fkt:SI (2.81) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    804648 8fkt:SI (2.81) BS03 rna ? GO:0000463 ... Q6DKI1 37410842
    804649 8fkt:SJ (2.81) BS01 rna 2.1.1.- GO:0000463 ... Q8IY81 37410842
    804650 8fkt:SK (2.81) BS01 rna ? GO:0000054 ... P56537 37410842
    804651 8fkt:SL (2.81) BS01 rna ? GO:0001649 ... O76021 37410842
    804652 8fkt:SM (2.81) BS01 rna ? GO:0000463 ... O00541 37410842
    804653 8fkt:SM (2.81) BS02 rna ? GO:0000463 ... O00541 37410842
    804654 8fkt:SN (2.81) BS01 rna ? GO:0003723 ... Q99848 37410842
    804655 8fkt:SO (2.81) BS01 rna ? GO:0000027 ... Q8TDN6 37410842
    804656 8fkt:SQ (2.81) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    804657 8fkt:SR (2.81) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    804658 8fkt:SR (2.81) BS02 GDP ? GO:0000079 ... Q9BZE4 37410842
    804659 8fkt:SS (2.81) BS01 rna ? GO:0000027 ... Q14137 37410842
    804660 8fkt:ST (2.81) BS01 rna ? GO:0000027 ... Q15050 37410842
    804661 8fkt:SV (2.81) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    804662 8fkt:SV (2.81) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    804663 8fkt:SW (2.81) BS01 rna 3.6.4.13 GO:0000463 ... Q9NVP1 37410842
    804664 8fkt:SY (2.81) BS01 rna 2.1.1.- GO:0000027 ... P46087 37410842
    804665 8fkt:SZ (2.81) BS01 rna ? GO:0003723 ... Q9Y3C1 37410842
    804666 8fkt:SZ (2.81) BS02 rna ? GO:0003723 ... Q9Y3C1 37410842
    804667 8fku:BA (2.82) BS01 rna ? GO:0002181 ... P30050 37410842
    804668 8fku:BB (2.82) BS01 rna ? GO:0002181 ... P62906 37410842
    804669 8fku:L6 (2.82) BS01 rna ? GO:0001824 ... P26373 37410842
    804670 8fku:L6 (2.82) BS02 rna ? GO:0001824 ... P26373 37410842
    804671 8fku:L7 (2.82) BS01 rna ? GO:0002181 ... P40429 37410842
    804672 8fku:L8 (2.82) BS01 rna ? GO:0002181 ... P50914 37410842
    804673 8fku:L9 (2.82) BS01 rna ? GO:0002181 ... P61313 37410842
    804674 8fku:L9 (2.82) BS02 rna ? GO:0002181 ... P61313 37410842
    804675 8fku:L9 (2.82) BS03 MG ? GO:0002181 ... P61313 37410842
    804676 8fku:LA (2.82) BS01 rna ? GO:0002181 ... P18621 37410842
    804677 8fku:LA (2.82) BS02 rna ? GO:0002181 ... P18621 37410842
    804678 8fku:LB (2.82) BS01 rna ? GO:0002181 ... Q07020 37410842
    804679 8fku:LC (2.82) BS01 rna ? GO:0002181 ... Q02543 37410842
    804680 8fku:LE (2.82) BS01 rna ? GO:0002181 ... P46778 37410842
    804681 8fku:LG (2.82) BS01 rna ? GO:0000122 ... P62829 37410842
    804682 8fku:LH (2.82) BS01 rna ? GO:0002181 ... P62750 37410842
    804683 8fku:LH (2.82) BS02 rna ? GO:0002181 ... P62750 37410842
    804684 8fku:LI (2.82) BS01 rna ? GO:0002181 ... P61254 37410842
    804685 8fku:LI (2.82) BS02 rna ? GO:0002181 ... P61254 37410842
    804686 8fku:LK (2.82) BS01 rna ? GO:0002181 ... P46776 37410842
    804687 8fku:LL (2.82) BS01 rna ? GO:0002181 ... P46779 37410842
    804688 8fku:LN (2.82) BS01 rna ? GO:0002181 ... P39023 37410842
    804689 8fku:LQ (2.82) BS01 rna ? GO:0002181 ... P62910 37410842
    804690 8fku:LQ (2.82) BS02 MG ? GO:0002181 ... P62910 37410842
    804691 8fku:LS (2.82) BS01 rna ? GO:0000463 ... P42766 37410842
    804692 8fku:LS (2.82) BS02 rna ? GO:0000463 ... P42766 37410842
    804693 8fku:LT (2.82) BS01 rna ? GO:0000049 ... P18077 37410842
    804694 8fku:LT (2.82) BS02 MG ? GO:0000049 ... P18077 37410842
    804695 8fku:LU (2.82) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    804696 8fku:LW (2.82) BS01 rna ? GO:0002181 ... P61927 37410842
    804697 8fku:LW (2.82) BS02 rna ? GO:0002181 ... P61927 37410842
    804698 8fku:LW (2.82) BS03 ZN ? GO:0002181 ... P61927 37410842
    804699 8fku:NB (2.82) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    804700 8fku:NF (2.82) BS01 rna ? GO:0000460 ... O95478 37410842
    804701 8fku:NH (2.82) BS01 rna ? GO:0003723 ... Q9Y221 37410842
    804702 8fku:NI (2.82) BS01 rna 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    804703 8fku:NI (2.82) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    804704 8fku:NK (2.82) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    804705 8fku:SA (2.82) BS01 rna ? GO:0002181 ... P36578 37410842
    804706 8fku:SA (2.82) BS02 rna ? GO:0002181 ... P36578 37410842
    804707 8fku:SC (2.82) BS01 rna ? GO:0002181 ... Q02878 37410842
    804708 8fku:SD (2.82) BS01 rna ? GO:0000463 ... P18124 37410842
    804709 8fku:SE (2.82) BS01 rna ? GO:0000470 ... P62424 37410842
    804710 8fku:SE (2.82) BS02 rna ? GO:0000470 ... P62424 37410842
    804711 8fku:SG (2.82) BS01 rna ? GO:0002181 ... P32969 37410842
    804712 8fku:SH (2.82) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    804713 8fku:SI (2.82) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    804714 8fku:SI (2.82) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    804715 8fku:SI (2.82) BS03 rna ? GO:0000463 ... Q6DKI1 37410842
    804716 8fku:SJ (2.82) BS01 rna 2.1.1.- GO:0000463 ... Q8IY81 37410842
    804717 8fku:SK (2.82) BS01 rna ? GO:0000054 ... P56537 37410842
    804718 8fku:SL (2.82) BS01 rna ? GO:0001649 ... O76021 37410842
    804719 8fku:SM (2.82) BS01 rna ? GO:0000463 ... O00541 37410842
    804720 8fku:SM (2.82) BS02 rna ? GO:0000463 ... O00541 37410842
    804721 8fku:SN (2.82) BS01 rna ? GO:0003723 ... Q99848 37410842
    804722 8fku:SO (2.82) BS01 rna ? GO:0000027 ... Q8TDN6 37410842
    804723 8fku:SQ (2.82) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    804724 8fku:SR (2.82) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    804725 8fku:SR (2.82) BS02 GDP ? GO:0000079 ... Q9BZE4 37410842
    804726 8fku:SR (2.82) BS03 MG ? GO:0000079 ... Q9BZE4 37410842
    804727 8fku:SS (2.82) BS01 rna ? GO:0000027 ... Q14137 37410842
    804728 8fku:ST (2.82) BS01 rna ? GO:0000027 ... Q15050 37410842
    804729 8fku:SV (2.82) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    804730 8fku:SV (2.82) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    804731 8fku:SW (2.82) BS01 rna 3.6.4.13 GO:0000463 ... Q9NVP1 37410842
    804732 8fku:SY (2.82) BS01 rna 2.1.1.- GO:0000027 ... P46087 37410842
    804733 8fku:SZ (2.82) BS01 rna ? GO:0003723 ... Q9Y3C1 37410842
    804734 8fkv:BA (2.47) BS01 rna ? GO:0002181 ... P30050 37410842
    804735 8fkv:BB (2.47) BS01 rna ? GO:0002181 ... P62906 37410842
    804736 8fkv:L6 (2.47) BS01 rna ? GO:0001824 ... P26373 37410842
    804737 8fkv:L6 (2.47) BS02 rna ? GO:0001824 ... P26373 37410842
    804738 8fkv:L7 (2.47) BS01 rna ? GO:0002181 ... P40429 37410842
    804739 8fkv:L8 (2.47) BS01 rna ? GO:0002181 ... P50914 37410842
    804740 8fkv:L9 (2.47) BS01 rna ? GO:0002181 ... P61313 37410842
    804741 8fkv:L9 (2.47) BS02 rna ? GO:0002181 ... P61313 37410842
    804742 8fkv:L9 (2.47) BS03 MG ? GO:0002181 ... P61313 37410842
    804743 8fkv:LA (2.47) BS01 rna ? GO:0002181 ... P18621 37410842
    804744 8fkv:LA (2.47) BS02 rna ? GO:0002181 ... P18621 37410842
    804745 8fkv:LB (2.47) BS01 rna ? GO:0002181 ... Q07020 37410842
    804746 8fkv:LC (2.47) BS01 rna ? GO:0002181 ... Q02543 37410842
    804747 8fkv:LE (2.47) BS01 rna ? GO:0002181 ... P46778 37410842
    804748 8fkv:LG (2.47) BS01 rna ? GO:0000122 ... P62829 37410842
    804749 8fkv:LH (2.47) BS01 rna ? GO:0002181 ... P62750 37410842
    804750 8fkv:LH (2.47) BS02 rna ? GO:0002181 ... P62750 37410842
    804751 8fkv:LI (2.47) BS01 rna ? GO:0002181 ... P61254 37410842
    804752 8fkv:LI (2.47) BS02 rna ? GO:0002181 ... P61254 37410842
    804753 8fkv:LK (2.47) BS01 rna ? GO:0002181 ... P46776 37410842
    804754 8fkv:LN (2.47) BS01 rna ? GO:0002181 ... P39023 37410842
    804755 8fkv:LP (2.47) BS01 rna ? GO:0002181 ... P62899 37410842
    804756 8fkv:LQ (2.47) BS01 rna ? GO:0002181 ... P62910 37410842
    804757 8fkv:LS (2.47) BS01 rna ? GO:0000463 ... P42766 37410842
    804758 8fkv:LS (2.47) BS02 rna ? GO:0000463 ... P42766 37410842
    804759 8fkv:LT (2.47) BS01 rna ? GO:0000049 ... P18077 37410842
    804760 8fkv:LT (2.47) BS02 MG ? GO:0000049 ... P18077 37410842
    804761 8fkv:LU (2.47) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    804762 8fkv:LW (2.47) BS01 rna ? GO:0002181 ... P61927 37410842
    804763 8fkv:LW (2.47) BS02 rna ? GO:0002181 ... P61927 37410842
    804764 8fkv:LW (2.47) BS03 ZN ? GO:0002181 ... P61927 37410842
    804765 8fkv:NB (2.47) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    804766 8fkv:NF (2.47) BS01 rna ? GO:0000460 ... O95478 37410842
    804767 8fkv:NH (2.47) BS01 rna ? GO:0003723 ... Q9Y221 37410842
    804768 8fkv:NI (2.47) BS01 rna 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    804769 8fkv:NI (2.47) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    804770 8fkv:NK (2.47) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    804771 8fkv:NM (2.47) BS01 rna ? GO:0000460 ... Q9BXY0 37410842
    804772 8fkv:NM (2.47) BS02 SF4 ? GO:0000460 ... Q9BXY0 37410842
    804773 8fkv:NO (2.47) BS01 rna ? GO:0003723 ... P56182 37410842
    804774 8fkv:NQ (2.47) BS01 rna ? GO:0000176 ... Q6RFH5 37410842
    804775 8fkv:NS (2.47) BS01 rna ? GO:0000460 ... Q9H9Y2 37410842
    804776 8fkv:NS (2.47) BS02 rna ? GO:0000460 ... Q9H9Y2 37410842
    804777 8fkv:SA (2.47) BS01 rna ? GO:0002181 ... P36578 37410842
    804778 8fkv:SA (2.47) BS02 rna ? GO:0002181 ... P36578 37410842
    804779 8fkv:SC (2.47) BS01 rna ? GO:0002181 ... Q02878 37410842
    804780 8fkv:SD (2.47) BS01 rna ? GO:0000463 ... P18124 37410842
    804781 8fkv:SE (2.47) BS01 rna ? GO:0000470 ... P62424 37410842
    804782 8fkv:SE (2.47) BS02 rna ? GO:0000470 ... P62424 37410842
    804783 8fkv:SE (2.47) BS03 rna ? GO:0000470 ... P62424 37410842
    804784 8fkv:SG (2.47) BS01 rna ? GO:0002181 ... P32969 37410842
    804785 8fkv:SH (2.47) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    804786 8fkv:SI (2.47) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    804787 8fkv:SI (2.47) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    804788 8fkv:SI (2.47) BS03 rna ? GO:0000463 ... Q6DKI1 37410842
    804789 8fkv:SJ (2.47) BS01 rna 2.1.1.- GO:0000463 ... Q8IY81 37410842
    804790 8fkv:SK (2.47) BS01 rna ? GO:0000054 ... P56537 37410842
    804791 8fkv:SL (2.47) BS01 rna ? GO:0001649 ... O76021 37410842
    804792 8fkv:SM (2.47) BS01 rna ? GO:0000463 ... O00541 37410842
    804793 8fkv:SM (2.47) BS02 rna ? GO:0000463 ... O00541 37410842
    804794 8fkv:SN (2.47) BS01 rna ? GO:0003723 ... Q99848 37410842
    804795 8fkv:SO (2.47) BS01 rna ? GO:0000027 ... Q8TDN6 37410842
    804796 8fkv:SQ (2.47) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    804797 8fkv:SR (2.47) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    804798 8fkv:SR (2.47) BS02 GDP ? GO:0000079 ... Q9BZE4 37410842
    804799 8fkv:SR (2.47) BS03 MG ? GO:0000079 ... Q9BZE4 37410842
    804800 8fkv:SS (2.47) BS01 rna ? GO:0000027 ... Q14137 37410842

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).