SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    804801 8fkv:ST (2.47) BS01 rna ? GO:0000027 ... Q15050 37410842
    804802 8fkv:SU (2.47) BS01 rna ? GO:0003682 ... Q8WTT2 37410842
    804803 8fkv:SU (2.47) BS02 MG ? GO:0003682 ... Q8WTT2 37410842
    804804 8fkv:SV (2.47) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    804805 8fkv:SV (2.47) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    804806 8fkv:SW (2.47) BS01 rna 3.6.4.13 GO:0000463 ... Q9NVP1 37410842
    804807 8fkv:SY (2.47) BS01 rna 2.1.1.- GO:0000027 ... P46087 37410842
    804808 8fkv:SZ (2.47) BS01 rna ? GO:0003723 ... Q9Y3C1 37410842
    804809 8fkv:SZ (2.47) BS02 rna ? GO:0003723 ... Q9Y3C1 37410842
    804810 8fkw:BA (2.5) BS01 rna ? GO:0002181 ... P30050 37410842
    804811 8fkw:BB (2.5) BS01 rna ? GO:0002181 ... P62906 37410842
    804812 8fkw:L6 (2.5) BS01 rna ? GO:0001824 ... P26373 37410842
    804813 8fkw:L6 (2.5) BS02 rna ? GO:0001824 ... P26373 37410842
    804814 8fkw:L7 (2.5) BS01 rna ? GO:0002181 ... P40429 37410842
    804815 8fkw:L8 (2.5) BS01 rna ? GO:0002181 ... P50914 37410842
    804816 8fkw:L9 (2.5) BS01 rna ? GO:0002181 ... P61313 37410842
    804817 8fkw:L9 (2.5) BS02 rna ? GO:0002181 ... P61313 37410842
    804818 8fkw:L9 (2.5) BS03 MG ? GO:0002181 ... P61313 37410842
    804819 8fkw:LA (2.5) BS01 rna ? GO:0002181 ... P18621 37410842
    804820 8fkw:LA (2.5) BS02 rna ? GO:0002181 ... P18621 37410842
    804821 8fkw:LB (2.5) BS01 rna ? GO:0002181 ... Q07020 37410842
    804822 8fkw:LC (2.5) BS01 rna ? GO:0002181 ... Q02543 37410842
    804823 8fkw:LE (2.5) BS01 rna ? GO:0002181 ... P46778 37410842
    804824 8fkw:LG (2.5) BS01 rna ? GO:0000122 ... P62829 37410842
    804825 8fkw:LH (2.5) BS01 rna ? GO:0002181 ... P62750 37410842
    804826 8fkw:LH (2.5) BS02 rna ? GO:0002181 ... P62750 37410842
    804827 8fkw:LI (2.5) BS01 rna ? GO:0002181 ... P61254 37410842
    804828 8fkw:LI (2.5) BS02 rna ? GO:0002181 ... P61254 37410842
    804829 8fkw:LK (2.5) BS01 rna ? GO:0002181 ... P46776 37410842
    804830 8fkw:LL (2.5) BS01 rna ? GO:0002181 ... P46779 37410842
    804831 8fkw:LN (2.5) BS01 rna ? GO:0002181 ... P39023 37410842
    804832 8fkw:LP (2.5) BS01 rna ? GO:0002181 ... P62899 37410842
    804833 8fkw:LQ (2.5) BS01 rna ? GO:0002181 ... P62910 37410842
    804834 8fkw:LQ (2.5) BS02 MG ? GO:0002181 ... P62910 37410842
    804835 8fkw:LS (2.5) BS01 rna ? GO:0000463 ... P42766 37410842
    804836 8fkw:LS (2.5) BS02 rna ? GO:0000463 ... P42766 37410842
    804837 8fkw:LT (2.5) BS01 rna ? GO:0000049 ... P18077 37410842
    804838 8fkw:LT (2.5) BS02 MG ? GO:0000049 ... P18077 37410842
    804839 8fkw:LU (2.5) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    804840 8fkw:LW (2.5) BS01 rna ? GO:0002181 ... P61927 37410842
    804841 8fkw:LW (2.5) BS02 rna ? GO:0002181 ... P61927 37410842
    804842 8fkw:LW (2.5) BS03 ZN ? GO:0002181 ... P61927 37410842
    804843 8fkw:NB (2.5) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    804844 8fkw:NF (2.5) BS01 rna ? GO:0000460 ... O95478 37410842
    804845 8fkw:NH (2.5) BS01 rna ? GO:0003723 ... Q9Y221 37410842
    804846 8fkw:NI (2.5) BS01 rna 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    804847 8fkw:NI (2.5) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    804848 8fkw:NK (2.5) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    804849 8fkw:SA (2.5) BS01 rna ? GO:0002181 ... P36578 37410842
    804850 8fkw:SA (2.5) BS02 rna ? GO:0002181 ... P36578 37410842
    804851 8fkw:SC (2.5) BS01 rna ? GO:0002181 ... Q02878 37410842
    804852 8fkw:SD (2.5) BS01 rna ? GO:0000463 ... P18124 37410842
    804853 8fkw:SE (2.5) BS01 rna ? GO:0000470 ... P62424 37410842
    804854 8fkw:SE (2.5) BS02 rna ? GO:0000470 ... P62424 37410842
    804855 8fkw:SE (2.5) BS03 rna ? GO:0000470 ... P62424 37410842
    804856 8fkw:SG (2.5) BS01 rna ? GO:0002181 ... P32969 37410842
    804857 8fkw:SH (2.5) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    804858 8fkw:SI (2.5) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    804859 8fkw:SI (2.5) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    804860 8fkw:SI (2.5) BS03 rna ? GO:0000463 ... Q6DKI1 37410842
    804861 8fkw:SJ (2.5) BS01 rna 2.1.1.- GO:0000463 ... Q8IY81 37410842
    804862 8fkw:SK (2.5) BS01 rna ? GO:0000054 ... P56537 37410842
    804863 8fkw:SL (2.5) BS01 rna ? GO:0001649 ... O76021 37410842
    804864 8fkw:SM (2.5) BS01 rna ? GO:0000463 ... O00541 37410842
    804865 8fkw:SM (2.5) BS02 rna ? GO:0000463 ... O00541 37410842
    804866 8fkw:SN (2.5) BS01 rna ? GO:0003723 ... Q99848 37410842
    804867 8fkw:SO (2.5) BS01 rna ? GO:0000027 ... Q8TDN6 37410842
    804868 8fkw:SQ (2.5) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    804869 8fkw:SR (2.5) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    804870 8fkw:SR (2.5) BS02 GDP ? GO:0000079 ... Q9BZE4 37410842
    804871 8fkw:SR (2.5) BS03 MG ? GO:0000079 ... Q9BZE4 37410842
    804872 8fkw:SS (2.5) BS01 rna ? GO:0000027 ... Q14137 37410842
    804873 8fkw:ST (2.5) BS01 rna ? GO:0000027 ... Q15050 37410842
    804874 8fkw:SU (2.5) BS01 rna ? GO:0003682 ... Q8WTT2 37410842
    804875 8fkw:SU (2.5) BS02 MG ? GO:0003682 ... Q8WTT2 37410842
    804876 8fkw:SV (2.5) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    804877 8fkw:SV (2.5) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    804878 8fkw:SW (2.5) BS01 rna 3.6.4.13 GO:0000463 ... Q9NVP1 37410842
    804879 8fkw:SY (2.5) BS01 rna 2.1.1.- GO:0000027 ... P46087 37410842
    804880 8fkw:SZ (2.5) BS01 rna ? GO:0003723 ... Q9Y3C1 37410842
    804881 8fkw:SZ (2.5) BS02 rna ? GO:0003723 ... Q9Y3C1 37410842
    804882 8fkx:BA (2.59) BS01 rna ? GO:0002181 ... P30050 37410842
    804883 8fkx:BB (2.59) BS01 rna ? GO:0002181 ... P62906 37410842
    804884 8fkx:L6 (2.59) BS01 rna ? GO:0001824 ... P26373 37410842
    804885 8fkx:L6 (2.59) BS02 rna ? GO:0001824 ... P26373 37410842
    804886 8fkx:L7 (2.59) BS01 rna ? GO:0002181 ... P40429 37410842
    804887 8fkx:L8 (2.59) BS01 rna ? GO:0002181 ... P50914 37410842
    804888 8fkx:L9 (2.59) BS01 rna ? GO:0002181 ... P61313 37410842
    804889 8fkx:L9 (2.59) BS02 rna ? GO:0002181 ... P61313 37410842
    804890 8fkx:L9 (2.59) BS03 MG ? GO:0002181 ... P61313 37410842
    804891 8fkx:LA (2.59) BS01 rna ? GO:0002181 ... P18621 37410842
    804892 8fkx:LA (2.59) BS02 rna ? GO:0002181 ... P18621 37410842
    804893 8fkx:LB (2.59) BS01 rna ? GO:0002181 ... Q07020 37410842
    804894 8fkx:LB (2.59) BS02 MG ? GO:0002181 ... Q07020 37410842
    804895 8fkx:LC (2.59) BS01 rna ? GO:0002181 ... Q02543 37410842
    804896 8fkx:LE (2.59) BS01 rna ? GO:0002181 ... P46778 37410842
    804897 8fkx:LG (2.59) BS01 rna ? GO:0000122 ... P62829 37410842
    804898 8fkx:LH (2.59) BS01 rna ? GO:0002181 ... P62750 37410842
    804899 8fkx:LH (2.59) BS02 rna ? GO:0002181 ... P62750 37410842
    804900 8fkx:LI (2.59) BS01 rna ? GO:0002181 ... P61254 37410842
    804901 8fkx:LI (2.59) BS02 rna ? GO:0002181 ... P61254 37410842
    804902 8fkx:LK (2.59) BS01 rna ? GO:0002181 ... P46776 37410842
    804903 8fkx:LL (2.59) BS01 rna ? GO:0002181 ... P46779 37410842
    804904 8fkx:LN (2.59) BS01 rna ? GO:0002181 ... P39023 37410842
    804905 8fkx:LP (2.59) BS01 rna ? GO:0002181 ... P62899 37410842
    804906 8fkx:LQ (2.59) BS01 rna ? GO:0002181 ... P62910 37410842
    804907 8fkx:LQ (2.59) BS02 MG ? GO:0002181 ... P62910 37410842
    804908 8fkx:LS (2.59) BS01 rna ? GO:0000463 ... P42766 37410842
    804909 8fkx:LS (2.59) BS02 rna ? GO:0000463 ... P42766 37410842
    804910 8fkx:LT (2.59) BS01 rna ? GO:0000049 ... P18077 37410842
    804911 8fkx:LT (2.59) BS02 MG ? GO:0000049 ... P18077 37410842
    804912 8fkx:LU (2.59) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    804913 8fkx:LW (2.59) BS01 rna ? GO:0002181 ... P61927 37410842
    804914 8fkx:LW (2.59) BS02 rna ? GO:0002181 ... P61927 37410842
    804915 8fkx:LW (2.59) BS03 ZN ? GO:0002181 ... P61927 37410842
    804916 8fkx:NB (2.59) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    804917 8fkx:NF (2.59) BS01 rna ? GO:0000460 ... O95478 37410842
    804918 8fkx:NH (2.59) BS01 rna ? GO:0003723 ... Q9Y221 37410842
    804919 8fkx:NI (2.59) BS01 rna 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    804920 8fkx:NI (2.59) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    804921 8fkx:NK (2.59) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    804922 8fkx:SA (2.59) BS01 rna ? GO:0002181 ... P36578 37410842
    804923 8fkx:SA (2.59) BS02 rna ? GO:0002181 ... P36578 37410842
    804924 8fkx:SA (2.59) BS03 MG ? GO:0002181 ... P36578 37410842
    804925 8fkx:SC (2.59) BS01 rna ? GO:0002181 ... Q02878 37410842
    804926 8fkx:SD (2.59) BS01 rna ? GO:0000463 ... P18124 37410842
    804927 8fkx:SE (2.59) BS01 rna ? GO:0000470 ... P62424 37410842
    804928 8fkx:SE (2.59) BS02 rna ? GO:0000470 ... P62424 37410842
    804929 8fkx:SG (2.59) BS01 rna ? GO:0002181 ... P32969 37410842
    804930 8fkx:SH (2.59) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    804931 8fkx:SI (2.59) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    804932 8fkx:SI (2.59) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    804933 8fkx:SI (2.59) BS03 rna ? GO:0000463 ... Q6DKI1 37410842
    804934 8fkx:SJ (2.59) BS01 rna 2.1.1.- GO:0000463 ... Q8IY81 37410842
    804935 8fkx:SK (2.59) BS01 rna ? GO:0000054 ... P56537 37410842
    804936 8fkx:SL (2.59) BS01 rna ? GO:0001649 ... O76021 37410842
    804937 8fkx:SM (2.59) BS01 rna ? GO:0000463 ... O00541 37410842
    804938 8fkx:SM (2.59) BS02 rna ? GO:0000463 ... O00541 37410842
    804939 8fkx:SN (2.59) BS01 rna ? GO:0003723 ... Q99848 37410842
    804940 8fkx:SO (2.59) BS01 rna ? GO:0000027 ... Q8TDN6 37410842
    804941 8fkx:SQ (2.59) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    804942 8fkx:SR (2.59) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    804943 8fkx:SR (2.59) BS02 GDP ? GO:0000079 ... Q9BZE4 37410842
    804944 8fkx:SS (2.59) BS01 rna ? GO:0000027 ... Q14137 37410842
    804945 8fkx:ST (2.59) BS01 rna ? GO:0000027 ... Q15050 37410842
    804946 8fkx:SU (2.59) BS01 MG ? GO:0003682 ... Q8WTT2 37410842
    804947 8fkx:SV (2.59) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    804948 8fkx:SV (2.59) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    804949 8fkx:SW (2.59) BS01 rna 3.6.4.13 GO:0000463 ... Q9NVP1 37410842
    804950 8fkx:SY (2.59) BS01 rna 2.1.1.- GO:0000027 ... P46087 37410842
    804951 8fkx:SZ (2.59) BS01 rna ? GO:0003723 ... Q9Y3C1 37410842
    804952 8fky:BA (2.67) BS01 rna ? GO:0002181 ... P30050 37410842
    804953 8fky:BB (2.67) BS01 rna ? GO:0002181 ... P62906 37410842
    804954 8fky:BC (2.67) BS01 rna ? GO:0005634 ... Q9H6Y2 37410842
    804955 8fky:L6 (2.67) BS01 rna ? GO:0001824 ... P26373 37410842
    804956 8fky:L6 (2.67) BS02 rna ? GO:0001824 ... P26373 37410842
    804957 8fky:L7 (2.67) BS01 rna ? GO:0002181 ... P40429 37410842
    804958 8fky:L8 (2.67) BS01 rna ? GO:0002181 ... P50914 37410842
    804959 8fky:L9 (2.67) BS01 rna ? GO:0002181 ... P61313 37410842
    804960 8fky:L9 (2.67) BS02 rna ? GO:0002181 ... P61313 37410842
    804961 8fky:L9 (2.67) BS03 MG ? GO:0002181 ... P61313 37410842
    804962 8fky:LA (2.67) BS01 rna ? GO:0002181 ... P18621 37410842
    804963 8fky:LA (2.67) BS02 rna ? GO:0002181 ... P18621 37410842
    804964 8fky:LB (2.67) BS01 rna ? GO:0002181 ... Q07020 37410842
    804965 8fky:LC (2.67) BS01 rna ? GO:0002181 ... Q02543 37410842
    804966 8fky:LD (2.67) BS01 rna ? GO:0002181 ... P84098 37410842
    804967 8fky:LE (2.67) BS01 rna ? GO:0002181 ... P46778 37410842
    804968 8fky:LG (2.67) BS01 rna ? GO:0000122 ... P62829 37410842
    804969 8fky:LH (2.67) BS01 rna ? GO:0002181 ... P62750 37410842
    804970 8fky:LH (2.67) BS02 rna ? GO:0002181 ... P62750 37410842
    804971 8fky:LI (2.67) BS01 rna ? GO:0002181 ... P61254 37410842
    804972 8fky:LI (2.67) BS02 rna ? GO:0002181 ... P61254 37410842
    804973 8fky:LJ (2.67) BS01 rna ? GO:0002181 ... P61353 37410842
    804974 8fky:LK (2.67) BS01 rna ? GO:0002181 ... P46776 37410842
    804975 8fky:LL (2.67) BS01 rna ? GO:0002181 ... P46779 37410842
    804976 8fky:LN (2.67) BS01 rna ? GO:0002181 ... P39023 37410842
    804977 8fky:LO (2.67) BS01 rna ? GO:0002181 ... P62888 37410842
    804978 8fky:LP (2.67) BS01 rna ? GO:0002181 ... P62899 37410842
    804979 8fky:LQ (2.67) BS01 rna ? GO:0002181 ... P62910 37410842
    804980 8fky:LQ (2.67) BS02 MG ? GO:0002181 ... P62910 37410842
    804981 8fky:LR (2.67) BS01 rna ? GO:0002181 ... P49207 37410842
    804982 8fky:LR (2.67) BS02 ZN ? GO:0002181 ... P49207 37410842
    804983 8fky:LS (2.67) BS01 rna ? GO:0000463 ... P42766 37410842
    804984 8fky:LS (2.67) BS02 rna ? GO:0000463 ... P42766 37410842
    804985 8fky:LT (2.67) BS01 rna ? GO:0000049 ... P18077 37410842
    804986 8fky:LT (2.67) BS02 MG ? GO:0000049 ... P18077 37410842
    804987 8fky:LU (2.67) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    804988 8fky:LW (2.67) BS01 rna ? GO:0002181 ... P61927 37410842
    804989 8fky:LW (2.67) BS02 rna ? GO:0002181 ... P61927 37410842
    804990 8fky:LW (2.67) BS03 ZN ? GO:0002181 ... P61927 37410842
    804991 8fky:NB (2.67) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    804992 8fky:NF (2.67) BS01 rna ? GO:0000460 ... O95478 37410842
    804993 8fky:NH (2.67) BS01 rna ? GO:0003723 ... Q9Y221 37410842
    804994 8fky:NI (2.67) BS01 rna 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    804995 8fky:NI (2.67) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    804996 8fky:NK (2.67) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    804997 8fky:SA (2.67) BS01 rna ? GO:0002181 ... P36578 37410842
    804998 8fky:SA (2.67) BS02 rna ? GO:0002181 ... P36578 37410842
    804999 8fky:SC (2.67) BS01 rna ? GO:0002181 ... Q02878 37410842
    805000 8fky:SD (2.67) BS01 rna ? GO:0000463 ... P18124 37410842

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).