SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4016 4017 4018 4019 4020 4021 4022 4023 4024 4025 4026 4027 4028 4029 4030 4031 4032 4033 4034 4035 4036 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    805001 8fky:SE (2.67) BS01 rna ? GO:0000470 ... P62424 37410842
    805002 8fky:SE (2.67) BS02 rna ? GO:0000470 ... P62424 37410842
    805003 8fky:SG (2.67) BS01 rna ? GO:0002181 ... P32969 37410842
    805004 8fky:SH (2.67) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    805005 8fky:SI (2.67) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    805006 8fky:SI (2.67) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    805007 8fky:SI (2.67) BS03 rna ? GO:0000463 ... Q6DKI1 37410842
    805008 8fky:SJ (2.67) BS01 rna 2.1.1.- GO:0000463 ... Q8IY81 37410842
    805009 8fky:SK (2.67) BS01 rna ? GO:0000054 ... P56537 37410842
    805010 8fky:SL (2.67) BS01 rna ? GO:0001649 ... O76021 37410842
    805011 8fky:SM (2.67) BS01 rna ? GO:0000463 ... O00541 37410842
    805012 8fky:SM (2.67) BS02 rna ? GO:0000463 ... O00541 37410842
    805013 8fky:SN (2.67) BS01 rna ? GO:0003723 ... Q99848 37410842
    805014 8fky:SO (2.67) BS01 rna ? GO:0000027 ... Q8TDN6 37410842
    805015 8fky:SQ (2.67) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    805016 8fky:SR (2.67) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    805017 8fky:SR (2.67) BS02 GDP ? GO:0000079 ... Q9BZE4 37410842
    805018 8fky:SS (2.67) BS01 rna ? GO:0000027 ... Q14137 37410842
    805019 8fky:ST (2.67) BS01 rna ? GO:0000027 ... Q15050 37410842
    805020 8fky:SU (2.67) BS01 MG ? GO:0003682 ... Q8WTT2 37410842
    805021 8fky:SV (2.67) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    805022 8fky:SV (2.67) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    805023 8fky:SW (2.67) BS01 rna 3.6.4.13 GO:0000463 ... Q9NVP1 37410842
    805024 8fky:SY (2.67) BS01 rna 2.1.1.- GO:0000027 ... P46087 37410842
    805025 8fky:SZ (2.67) BS01 rna ? GO:0003723 ... Q9Y3C1 37410842
    805026 8fkz:BA (3.04) BS01 rna ? GO:0002181 ... P30050 37410842
    805027 8fkz:L6 (3.04) BS01 rna ? GO:0001824 ... P26373 37410842
    805028 8fkz:L6 (3.04) BS02 rna ? GO:0001824 ... P26373 37410842
    805029 8fkz:L7 (3.04) BS01 rna ? GO:0002181 ... P40429 37410842
    805030 8fkz:L8 (3.04) BS01 rna ? GO:0002181 ... P50914 37410842
    805031 8fkz:L9 (3.04) BS01 rna ? GO:0002181 ... P61313 37410842
    805032 8fkz:L9 (3.04) BS02 rna ? GO:0002181 ... P61313 37410842
    805033 8fkz:L9 (3.04) BS03 MG ? GO:0002181 ... P61313 37410842
    805034 8fkz:LA (3.04) BS01 rna ? GO:0002181 ... P18621 37410842
    805035 8fkz:LA (3.04) BS02 rna ? GO:0002181 ... P18621 37410842
    805036 8fkz:LB (3.04) BS01 rna ? GO:0002181 ... Q07020 37410842
    805037 8fkz:LC (3.04) BS01 rna ? GO:0002181 ... Q02543 37410842
    805038 8fkz:LD (3.04) BS01 rna ? GO:0002181 ... P84098 37410842
    805039 8fkz:LE (3.04) BS01 rna ? GO:0002181 ... P46778 37410842
    805040 8fkz:LF (3.04) BS01 rna ? GO:0002181 ... P35268 37410842
    805041 8fkz:LG (3.04) BS01 rna ? GO:0000122 ... P62829 37410842
    805042 8fkz:LH (3.04) BS01 rna ? GO:0002181 ... P62750 37410842
    805043 8fkz:LH (3.04) BS02 rna ? GO:0002181 ... P62750 37410842
    805044 8fkz:LI (3.04) BS01 rna ? GO:0002181 ... P61254 37410842
    805045 8fkz:LI (3.04) BS02 rna ? GO:0002181 ... P61254 37410842
    805046 8fkz:LJ (3.04) BS01 rna ? GO:0002181 ... P61353 37410842
    805047 8fkz:LK (3.04) BS01 rna ? GO:0002181 ... P46776 37410842
    805048 8fkz:LL (3.04) BS01 rna ? GO:0002181 ... P46779 37410842
    805049 8fkz:LN (3.04) BS01 rna ? GO:0002181 ... P39023 37410842
    805050 8fkz:LO (3.04) BS01 rna ? GO:0002181 ... P62888 37410842
    805051 8fkz:LP (3.04) BS01 rna ? GO:0002181 ... P62899 37410842
    805052 8fkz:LQ (3.04) BS01 rna ? GO:0002181 ... P62910 37410842
    805053 8fkz:LR (3.04) BS01 rna ? GO:0002181 ... P49207 37410842
    805054 8fkz:LR (3.04) BS02 ZN ? GO:0002181 ... P49207 37410842
    805055 8fkz:LS (3.04) BS01 rna ? GO:0000463 ... P42766 37410842
    805056 8fkz:LS (3.04) BS02 rna ? GO:0000463 ... P42766 37410842
    805057 8fkz:LT (3.04) BS01 rna ? GO:0000049 ... P18077 37410842
    805058 8fkz:LT (3.04) BS02 MG ? GO:0000049 ... P18077 37410842
    805059 8fkz:LU (3.04) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    805060 8fkz:LW (3.04) BS01 rna ? GO:0002181 ... P61927 37410842
    805061 8fkz:LW (3.04) BS02 rna ? GO:0002181 ... P61927 37410842
    805062 8fkz:LW (3.04) BS03 ZN ? GO:0002181 ... P61927 37410842
    805063 8fkz:LX (3.04) BS01 rna ? GO:0002181 ... P61513 37410842
    805064 8fkz:LX (3.04) BS02 ZN ? GO:0002181 ... P61513 37410842
    805065 8fkz:LY (3.04) BS01 rna ? GO:0001501 ... P63173 37410842
    805066 8fkz:LZ (3.04) BS01 rna ? GO:0002181 ... P62891 37410842
    805067 8fkz:LZ (3.04) BS02 rna ? GO:0002181 ... P62891 37410842
    805068 8fkz:NB (3.04) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    805069 8fkz:NC (3.04) BS01 rna ? GO:0003723 ... Q13823 37410842
    805070 8fkz:NF (3.04) BS01 rna ? GO:0000460 ... O95478 37410842
    805071 8fkz:NK (3.04) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    805072 8fkz:NL (3.04) BS01 rna ? GO:0000027 ... Q9NZM5 37410842
    805073 8fkz:SA (3.04) BS01 rna ? GO:0002181 ... P36578 37410842
    805074 8fkz:SA (3.04) BS02 rna ? GO:0002181 ... P36578 37410842
    805075 8fkz:SA (3.04) BS03 MG ? GO:0002181 ... P36578 37410842
    805076 8fkz:SC (3.04) BS01 rna ? GO:0002181 ... Q02878 37410842
    805077 8fkz:SD (3.04) BS01 rna ? GO:0000463 ... P18124 37410842
    805078 8fkz:SE (3.04) BS01 rna ? GO:0000470 ... P62424 37410842
    805079 8fkz:SE (3.04) BS02 rna ? GO:0000470 ... P62424 37410842
    805080 8fkz:SF (3.04) BS01 rna ? GO:0002181 ... P62917 37410842
    805081 8fkz:SG (3.04) BS01 rna ? GO:0002181 ... P32969 37410842
    805082 8fkz:SH (3.04) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    805083 8fkz:SI (3.04) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    805084 8fkz:SI (3.04) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    805085 8fkz:SL (3.04) BS01 rna ? GO:0001649 ... O76021 37410842
    805086 8fkz:SM (3.04) BS01 rna ? GO:0000463 ... O00541 37410842
    805087 8fkz:SM (3.04) BS02 rna ? GO:0000463 ... O00541 37410842
    805088 8fkz:SQ (3.04) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    805089 8fkz:SR (3.04) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    805090 8fkz:SR (3.04) BS02 rna ? GO:0000079 ... Q9BZE4 37410842
    805091 8fkz:SR (3.04) BS03 GDP ? GO:0000079 ... Q9BZE4 37410842
    805092 8fkz:SR (3.04) BS04 MG ? GO:0000079 ... Q9BZE4 37410842
    805093 8fkz:SV (3.04) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    805094 8fkz:SV (3.04) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    805095 8fl0:BA (2.91) BS01 rna ? GO:0002181 ... P30050 37410842
    805096 8fl0:L5 (2.91) BS01 rna ? GO:0000027 ... P62913 37410842
    805097 8fl0:L5 (2.91) BS02 rna ? GO:0000027 ... P62913 37410842
    805098 8fl0:L7 (2.91) BS01 rna ? GO:0002181 ... P40429 37410842
    805099 8fl0:L8 (2.91) BS01 rna ? GO:0002181 ... P50914 37410842
    805100 8fl0:LB (2.91) BS01 rna ? GO:0002181 ... Q07020 37410842
    805101 8fl0:LC (2.91) BS01 rna ? GO:0002181 ... Q02543 37410842
    805102 8fl0:LE (2.91) BS01 rna ? GO:0002181 ... P46778 37410842
    805103 8fl0:LG (2.91) BS01 rna ? GO:0000122 ... P62829 37410842
    805104 8fl0:LL (2.91) BS01 rna ? GO:0002181 ... P46779 37410842
    805105 8fl0:LN (2.91) BS01 rna ? GO:0002181 ... P39023 37410842
    805106 8fl0:LQ (2.91) BS01 rna ? GO:0002181 ... P62910 37410842
    805107 8fl0:LT (2.91) BS01 rna ? GO:0000049 ... P18077 37410842
    805108 8fl0:LT (2.91) BS02 MG ? GO:0000049 ... P18077 37410842
    805109 8fl0:NB (2.91) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    805110 8fl0:NC (2.91) BS01 rna ? GO:0003723 ... Q13823 37410842
    805111 8fl0:NC (2.91) BS02 GTP ? GO:0003723 ... Q13823 37410842
    805112 8fl0:NC (2.91) BS03 MG ? GO:0003723 ... Q13823 37410842
    805113 8fl0:ND (2.91) BS01 rna ? GO:0000027 ... Q9H7B2 37410842
    805114 8fl0:ND (2.91) BS02 rna ? GO:0000027 ... Q9H7B2 37410842
    805115 8fl0:NF (2.91) BS01 rna ? GO:0000460 ... O95478 37410842
    805116 8fl0:NK (2.91) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    805117 8fl0:NZ (2.91) BS01 rna ? GO:0003723 ... Q9H6F5 37410842
    805118 8fl0:SA (2.91) BS01 rna ? GO:0002181 ... P36578 37410842
    805119 8fl0:SB (2.91) BS01 rna ? GO:0000027 ... P46777 37410842
    805120 8fl0:SB (2.91) BS02 rna ? GO:0000027 ... P46777 37410842
    805121 8fl0:SC (2.91) BS01 rna ? GO:0002181 ... Q02878 37410842
    805122 8fl0:SD (2.91) BS01 rna ? GO:0000463 ... P18124 37410842
    805123 8fl0:SG (2.91) BS01 rna ? GO:0002181 ... P32969 37410842
    805124 8fl0:SK (2.91) BS01 rna ? GO:0000054 ... P56537 37410842
    805125 8fl0:SQ (2.91) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    805126 8fl0:SR (2.91) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    805127 8fl0:SR (2.91) BS02 GDP ? GO:0000079 ... Q9BZE4 37410842
    805128 8fl0:SR (2.91) BS03 MG ? GO:0000079 ... Q9BZE4 37410842
    805129 8fl0:ST (2.91) BS01 rna ? GO:0000027 ... Q15050 37410842
    805130 8fl0:SV (2.91) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    805131 8fl0:SV (2.91) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    805132 8fl1:H (3.75) BS01 MAN N/A N/A N/A 37436900
    805133 8fl2:BA (2.67) BS01 rna ? GO:0002181 ... P30050 37410842
    805134 8fl2:BB (2.67) BS01 rna ? GO:0002181 ... P62906 37410842
    805135 8fl2:L5 (2.67) BS01 rna ? GO:0000027 ... P62913 37410842
    805136 8fl2:L5 (2.67) BS02 rna ? GO:0000027 ... P62913 37410842
    805137 8fl2:L6 (2.67) BS01 rna ? GO:0001824 ... P26373 37410842
    805138 8fl2:L6 (2.67) BS02 rna ? GO:0001824 ... P26373 37410842
    805139 8fl2:L6 (2.67) BS03 MG ? GO:0001824 ... P26373 37410842
    805140 8fl2:L7 (2.67) BS01 rna ? GO:0002181 ... P40429 37410842
    805141 8fl2:L8 (2.67) BS01 rna ? GO:0002181 ... P50914 37410842
    805142 8fl2:L9 (2.67) BS01 rna ? GO:0002181 ... P61313 37410842
    805143 8fl2:L9 (2.67) BS02 rna ? GO:0002181 ... P61313 37410842
    805144 8fl2:L9 (2.67) BS03 MG ? GO:0002181 ... P61313 37410842
    805145 8fl2:LA (2.67) BS01 rna ? GO:0002181 ... P18621 37410842
    805146 8fl2:LA (2.67) BS02 rna ? GO:0002181 ... P18621 37410842
    805147 8fl2:LB (2.67) BS01 rna ? GO:0002181 ... Q07020 37410842
    805148 8fl2:LC (2.67) BS01 rna ? GO:0002181 ... Q02543 37410842
    805149 8fl2:LC (2.67) BS02 rna ? GO:0002181 ... Q02543 37410842
    805150 8fl2:LD (2.67) BS01 rna ? GO:0002181 ... P84098 37410842
    805151 8fl2:LE (2.67) BS01 rna ? GO:0002181 ... P46778 37410842
    805152 8fl2:LE (2.67) BS02 rna ? GO:0002181 ... P46778 37410842
    805153 8fl2:LF (2.67) BS01 rna ? GO:0002181 ... P35268 37410842
    805154 8fl2:LG (2.67) BS01 rna ? GO:0000122 ... P62829 37410842
    805155 8fl2:LH (2.67) BS01 rna ? GO:0002181 ... P62750 37410842
    805156 8fl2:LH (2.67) BS02 rna ? GO:0002181 ... P62750 37410842
    805157 8fl2:LI (2.67) BS01 rna ? GO:0002181 ... P61254 37410842
    805158 8fl2:LI (2.67) BS02 rna ? GO:0002181 ... P61254 37410842
    805159 8fl2:LJ (2.67) BS01 rna ? GO:0002181 ... P61353 37410842
    805160 8fl2:LK (2.67) BS01 rna ? GO:0002181 ... P46776 37410842
    805161 8fl2:LL (2.67) BS01 rna ? GO:0002181 ... P46779 37410842
    805162 8fl2:LN (2.67) BS01 rna ? GO:0002181 ... P39023 37410842
    805163 8fl2:LO (2.67) BS01 rna ? GO:0002181 ... P62888 37410842
    805164 8fl2:LP (2.67) BS01 rna ? GO:0002181 ... P62899 37410842
    805165 8fl2:LQ (2.67) BS01 rna ? GO:0002181 ... P62910 37410842
    805166 8fl2:LQ (2.67) BS02 MG ? GO:0002181 ... P62910 37410842
    805167 8fl2:LR (2.67) BS01 rna ? GO:0002181 ... P49207 37410842
    805168 8fl2:LR (2.67) BS02 MG ? GO:0002181 ... P49207 37410842
    805169 8fl2:LR (2.67) BS03 ZN ? GO:0002181 ... P49207 37410842
    805170 8fl2:LS (2.67) BS01 rna ? GO:0000463 ... P42766 37410842
    805171 8fl2:LS (2.67) BS02 rna ? GO:0000463 ... P42766 37410842
    805172 8fl2:LT (2.67) BS01 rna ? GO:0000049 ... P18077 37410842
    805173 8fl2:LT (2.67) BS02 MG ? GO:0000049 ... P18077 37410842
    805174 8fl2:LU (2.67) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    805175 8fl2:LW (2.67) BS01 rna ? GO:0002181 ... P61927 37410842
    805176 8fl2:LW (2.67) BS02 rna ? GO:0002181 ... P61927 37410842
    805177 8fl2:LW (2.67) BS03 ZN ? GO:0002181 ... P61927 37410842
    805178 8fl2:LX (2.67) BS01 rna ? GO:0002181 ... P61513 37410842
    805179 8fl2:LX (2.67) BS02 ZN ? GO:0002181 ... P61513 37410842
    805180 8fl2:LY (2.67) BS01 rna ? GO:0001501 ... P63173 37410842
    805181 8fl2:LZ (2.67) BS01 rna ? GO:0002181 ... P62891 37410842
    805182 8fl2:LZ (2.67) BS02 rna ? GO:0002181 ... P62891 37410842
    805183 8fl2:NB (2.67) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    805184 8fl2:NB (2.67) BS02 rna ? GO:0003723 ... Q9BVP2 37410842
    805185 8fl2:NC (2.67) BS01 rna ? GO:0003723 ... Q13823 37410842
    805186 8fl2:NC (2.67) BS02 GTP ? GO:0003723 ... Q13823 37410842
    805187 8fl2:NC (2.67) BS03 MG ? GO:0003723 ... Q13823 37410842
    805188 8fl2:NF (2.67) BS01 rna ? GO:0000460 ... O95478 37410842
    805189 8fl2:NJ (2.67) BS01 rna ? GO:0000278 ... Q9NVX2 37410842
    805190 8fl2:NK (2.67) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    805191 8fl2:NL (2.67) BS01 rna ? GO:0000027 ... Q9NZM5 37410842
    805192 8fl2:NP (2.67) BS01 rna ? GO:0003676 ... O00488 37410842
    805193 8fl2:NP (2.67) BS02 ZN ? GO:0003676 ... O00488 37410842
    805194 8fl2:NT (2.67) BS01 rna ? GO:0000055 ... Q9NVU7 37410842
    805195 8fl2:NU (2.67) BS01 peptide ? GO:0005515 ... Q9NXF1 37410842
    805196 8fl2:NU (2.67) BS02 rna ? GO:0005515 ... Q9NXF1 37410842
    805197 8fl2:NY (2.67) BS01 rna ? GO:0000791 ... Q8IZL8 37410842
    805198 8fl2:NZ (2.67) BS01 rna ? GO:0003723 ... Q9H6F5 37410842
    805199 8fl2:NZ (2.67) BS02 rna ? GO:0003723 ... Q9H6F5 37410842
    805200 8fl2:SA (2.67) BS01 rna ? GO:0002181 ... P36578 37410842

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).