SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    805201 8f8y:B (3.06) BS01 peptide 1.14.11.- N/A O75151 36596360
    805202 8f8y:B (3.06) BS02 ZN 1.14.11.- N/A O75151 36596360
    805203 8f8y:B (3.06) BS03 ZN 1.14.11.- N/A O75151 36596360
    805204 8f8z:A (3.3) BS01 peptide 1.14.11.- N/A O75151 36596360
    805205 8f8z:A (3.3) BS02 ZN 1.14.11.- N/A O75151 36596360
    805206 8f8z:A (3.3) BS03 ZN 1.14.11.- N/A O75151 36596360
    805207 8f8z:B (3.3) BS01 peptide 1.14.11.- N/A O75151 36596360
    805208 8f8z:B (3.3) BS02 ZN 1.14.11.- N/A O75151 36596360
    805209 8f8z:B (3.3) BS03 ZN 1.14.11.- N/A O75151 36596360
    805210 8f90:A (1.6) BS01 MG N/A N/A A0A6N7UZI9 N/A
    805211 8f90:B (1.6) BS01 MG N/A N/A A0A6N7UZI9 N/A
    805212 8f90:C (1.6) BS01 MG N/A N/A A0A6N7UZI9 N/A
    805213 8f90:D (1.6) BS01 MG N/A N/A A0A6N7UZI9 N/A
    805214 8f91:A (2.8) BS01 HEM ? GO:0004497 ... A0A385L3H2 37405871
    805215 8f93:A (2.3) BS01 XKN ? GO:0000122 ... P61964 37460812
    805216 8f93:A (2.3) BS02 XKN ? GO:0000122 ... P61964 37460812
    805217 8f93:B (2.3) BS01 XKN ? GO:0000122 ... P61964 37460812
    805218 8f93:B (2.3) BS02 XKN ? GO:0000122 ... P61964 37460812
    805219 8f95:A (2.45) BS01 peptide N/A N/A N/A 38007690
    805220 8f95:B (2.45) BS01 peptide N/A N/A N/A 38007690
    805221 8f95:H (2.45) BS01 peptide N/A N/A N/A 38007690
    805222 8f95:L (2.45) BS01 peptide N/A N/A N/A 38007690
    805223 8f96:A (2.95) BS01 XLW 3.4.22.59 GO:0001650 ... P55212 37406165
    805224 8f96:B (2.95) BS01 XLW 3.4.22.59 GO:0001650 ... P55212 37406165
    805225 8f96:C (2.95) BS01 XLW 3.4.22.59 GO:0001650 ... P55212 37406165
    805226 8f96:D (2.95) BS01 XLW 3.4.22.59 GO:0001650 ... P55212 37406165
    805227 8f97:A (2.32) BS01 XM6 3.4.22.59 GO:0001650 ... P55212 37406165
    805228 8f97:C (2.32) BS01 XM6 3.4.22.59 GO:0001650 ... P55212 37406165
    805229 8f97:D (2.32) BS01 XM6 3.4.22.59 GO:0001650 ... P55212 37406165
    805230 8f98:A (2.7) BS01 XML 3.4.22.59 GO:0001650 ... P55212 37406165
    805231 8f98:B (2.7) BS01 XML 3.4.22.59 GO:0001650 ... P55212 37406165
    805232 8f98:D (2.7) BS01 XML 3.4.22.59 GO:0001650 ... P55212 37406165
    805233 8f99:A (2.86) BS01 XMR 3.4.22.59 GO:0001650 ... P55212 37406165
    805234 8f99:B (2.86) BS01 XMR 3.4.22.59 GO:0001650 ... P55212 37406165
    805235 8f99:C (2.86) BS01 XMR 3.4.22.59 GO:0001650 ... P55212 37406165
    805236 8f99:D (2.86) BS01 XMR 3.4.22.59 GO:0001650 ... P55212 37406165
    805237 8f9a:B (2.55) BS01 XMX 3.4.22.59 GO:0001650 ... P55212 37406165
    805238 8f9a:C (2.55) BS01 XMX 3.4.22.59 GO:0001650 ... P55212 37406165
    805239 8f9a:D (2.55) BS01 XMX 3.4.22.59 GO:0001650 ... P55212 37406165
    805240 8f9b:A (2.65) BS01 XN5 3.4.22.59 GO:0001650 ... P55212 37406165
    805241 8f9b:B (2.65) BS01 XN5 3.4.22.59 GO:0001650 ... P55212 37406165
    805242 8f9b:C (2.65) BS01 XN5 3.4.22.59 GO:0001650 ... P55212 37406165
    805243 8f9b:D (2.65) BS01 XN5 3.4.22.59 GO:0001650 ... P55212 37406165
    805244 8f9c:A (2.8) BS01 XN9 3.4.22.59 GO:0001650 ... P55212 37406165
    805245 8f9c:B (2.8) BS01 XN9 3.4.22.59 GO:0001650 ... P55212 37406165
    805246 8f9c:C (2.8) BS01 XN9 3.4.22.59 GO:0001650 ... P55212 37406165
    805247 8f9c:D (2.8) BS01 XN9 3.4.22.59 GO:0001650 ... P55212 37406165
    805248 8f9d:A (2.65) BS01 XNK 3.4.22.59 GO:0001650 ... P55212 37406165
    805249 8f9d:B (2.65) BS01 XNK 3.4.22.59 GO:0001650 ... P55212 37406165
    805250 8f9d:C (2.65) BS01 XNK 3.4.22.59 GO:0001650 ... P55212 37406165
    805251 8f9d:D (2.65) BS01 XNK 3.4.22.59 GO:0001650 ... P55212 37406165
    805252 8f9e:A (2.95) BS01 peptide N/A N/A N/A 38007690
    805253 8f9e:B (2.95) BS01 peptide N/A N/A N/A 38007690
    805254 8f9e:H (2.95) BS01 peptide N/A N/A N/A 38007690
    805255 8f9e:L (2.95) BS01 peptide N/A N/A N/A 38007690
    805256 8f9f:A (2.2) BS01 peptide N/A N/A N/A 38007690
    805257 8f9f:B (2.2) BS01 peptide N/A N/A N/A 38007690
    805258 8f9f:H (2.2) BS01 peptide N/A N/A N/A 38007690
    805259 8f9f:L (2.2) BS01 peptide N/A N/A N/A 38007690
    805260 8f9h:A (1.75) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    805261 8f9h:A (1.75) BS02 NSM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    805262 8f9i:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    805263 8f9i:A (1.8) BS02 NOE 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    805264 8f9i:B (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    805265 8f9j:A (1.75) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    805266 8f9j:A (1.75) BS02 XEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    805267 8f9n:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    805268 8f9n:A (1.8) BS02 XEP 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    805269 8f9p:A (1.55) BS01 ACT ? GO:0001681 ... A0A8C0T2R3 39321866
    805270 8f9s:A (2.1) BS01 peptide N/A N/A N/A 38007690
    805271 8f9s:B (2.1) BS01 peptide N/A N/A N/A 38007690
    805272 8f9s:H (2.1) BS01 peptide N/A N/A N/A 38007690
    805273 8f9s:L (2.1) BS01 peptide N/A N/A N/A 38007690
    805274 8f9t:A (1.85) BS01 peptide N/A N/A N/A 38007690
    805275 8f9t:B (1.85) BS01 peptide N/A N/A N/A 38007690
    805276 8f9t:H (1.85) BS01 peptide N/A N/A N/A 38007690
    805277 8f9t:L (1.85) BS01 peptide N/A N/A N/A 38007690
    805278 8f9u:A (1.7) BS01 peptide N/A N/A N/A 38007690
    805279 8f9u:B (1.7) BS01 peptide N/A N/A N/A 38007690
    805280 8f9v:A (2.25) BS01 peptide N/A N/A N/A 38007690
    805281 8f9v:B (2.25) BS01 peptide N/A N/A N/A 38007690
    805282 8f9v:C (2.25) BS01 peptide N/A N/A N/A 38007690
    805283 8f9v:D (2.25) BS01 peptide N/A N/A N/A 38007690
    805284 8f9v:E (2.25) BS01 peptide N/A N/A N/A 38007690
    805285 8f9v:F (2.25) BS01 peptide N/A N/A N/A 38007690
    805286 8f9v:G (2.25) BS01 peptide N/A N/A N/A 38007690
    805287 8f9v:H (2.25) BS01 peptide N/A N/A N/A 38007690
    805288 8f9w:A (2.4) BS01 peptide N/A N/A N/A 38007690
    805289 8f9w:B (2.4) BS01 peptide N/A N/A N/A 38007690
    805290 8f9w:C (2.4) BS01 peptide N/A N/A N/A 38007690
    805291 8f9w:D (2.4) BS01 peptide N/A N/A N/A 38007690
    805292 8f9w:E (2.4) BS01 peptide N/A N/A N/A 38007690
    805293 8f9w:F (2.4) BS01 peptide N/A N/A N/A 38007690
    805294 8f9w:G (2.4) BS01 peptide N/A N/A N/A 38007690
    805295 8f9w:H (2.4) BS01 peptide N/A N/A N/A 38007690
    805296 8f9x:A (2.32) BS01 ZN ? GO:0004061 ... Q5LVE1 40364453
    805297 8f9x:A (2.32) BS02 ZN ? GO:0004061 ... Q5LVE1 40364453
    805298 8f9x:A (2.32) BS03 ZN ? GO:0004061 ... Q5LVE1 40364453
    805299 8f9x:B (2.32) BS01 ZN ? GO:0004061 ... Q5LVE1 40364453
    805300 8f9x:B (2.32) BS02 ZN ? GO:0004061 ... Q5LVE1 40364453
    805301 8f9x:B (2.32) BS03 ZN ? GO:0004061 ... Q5LVE1 40364453
    805302 8f9x:C (2.32) BS01 ZN ? GO:0004061 ... Q5LVE1 40364453
    805303 8f9x:C (2.32) BS02 ZN ? GO:0004061 ... Q5LVE1 40364453
    805304 8f9x:C (2.32) BS03 ZN ? GO:0004061 ... Q5LVE1 40364453
    805305 8f9x:D (2.32) BS01 ZN ? GO:0004061 ... Q5LVE1 40364453
    805306 8f9x:D (2.32) BS02 ZN ? GO:0004061 ... Q5LVE1 40364453
    805307 8f9x:D (2.32) BS03 ZN ? GO:0004061 ... Q5LVE1 40364453
    805308 8f9x:E (2.32) BS01 ZN ? GO:0004061 ... Q5LVE1 40364453
    805309 8f9x:E (2.32) BS02 ZN ? GO:0004061 ... Q5LVE1 40364453
    805310 8f9x:E (2.32) BS03 ZN ? GO:0004061 ... Q5LVE1 40364453
    805311 8f9x:F (2.32) BS01 ZN ? GO:0004061 ... Q5LVE1 40364453
    805312 8f9x:F (2.32) BS02 ZN ? GO:0004061 ... Q5LVE1 40364453
    805313 8f9x:F (2.32) BS03 ZN ? GO:0004061 ... Q5LVE1 40364453
    805314 8f9x:G (2.32) BS01 ZN ? GO:0004061 ... Q5LVE1 40364453
    805315 8f9x:G (2.32) BS02 ZN ? GO:0004061 ... Q5LVE1 40364453
    805316 8f9x:G (2.32) BS03 ZN ? GO:0004061 ... Q5LVE1 40364453
    805317 8f9x:H (2.32) BS01 ZN ? GO:0004061 ... Q5LVE1 40364453
    805318 8f9x:H (2.32) BS02 ZN ? GO:0004061 ... Q5LVE1 40364453
    805319 8f9x:H (2.32) BS03 ZN ? GO:0004061 ... Q5LVE1 40364453
    805320 8f9x:I (2.32) BS01 ZN ? GO:0004061 ... Q5LVE1 40364453
    805321 8f9x:I (2.32) BS02 ZN ? GO:0004061 ... Q5LVE1 40364453
    805322 8f9x:I (2.32) BS03 ZN ? GO:0004061 ... Q5LVE1 40364453
    805323 8f9x:J (2.32) BS01 ZN ? GO:0004061 ... Q5LVE1 40364453
    805324 8f9x:J (2.32) BS02 ZN ? GO:0004061 ... Q5LVE1 40364453
    805325 8f9x:J (2.32) BS03 ZN ? GO:0004061 ... Q5LVE1 40364453
    805326 8f9y:A (2.6) BS01 MG 3.1.3.57
    3.1.3.7
    GO:0000103 ... Q42546 27432987
    805327 8f9y:A (2.6) BS02 PO4 3.1.3.57
    3.1.3.7
    GO:0000103 ... Q42546 27432987
    805328 8f9z:A (1.94) BS01 XKW ? GO:0019031 ... A0A0M3KKW8 36555641
    805329 8fa0:A (2.09) BS01 XKR ? GO:0019031 ... A0A0M3KKW8 36555641
    805330 8fa0:A (2.09) BS02 XKR ? GO:0019031 ... A0A0M3KKW8 36555641
    805331 8fa6:A (2.6) BS01 peptide N/A N/A N/A 38007690
    805332 8fa6:B (2.6) BS01 peptide N/A N/A N/A 38007690
    805333 8fa6:H (2.6) BS01 peptide N/A N/A N/A 38007690
    805334 8fa6:L (2.6) BS01 peptide N/A N/A N/A 38007690
    805335 8fa7:H (1.8) BS01 peptide N/A N/A N/A 38007690
    805336 8fa7:L (1.8) BS01 peptide N/A N/A N/A 38007690
    805337 8fa8:H (1.8) BS01 peptide N/A N/A N/A 38007690
    805338 8fa8:L (1.8) BS01 peptide N/A N/A N/A 38007690
    805339 8fa9:H (2.45) BS01 peptide N/A N/A N/A 38007690
    805340 8fa9:L (2.45) BS01 peptide N/A N/A N/A 38007690
    805341 8fac:A (3.92) BS01 GDP 2.7.11.1 GO:0004672 ... Q38SD2 37558661
    805342 8fad:A (4.0) BS01 83G ? GO:0019031 ... B0FDK7 37202420
    805343 8fad:C (4.0) BS01 MAN ? GO:0019031 ... B0FDK7 37202420
    805344 8fad:C (4.0) BS02 83G ? GO:0019031 ... B0FDK7 37202420
    805345 8fad:E (4.0) BS01 83G ? GO:0019031 ... B0FDK7 37202420
    805346 8fae:A (3.8) BS01 MAN ? GO:0019031 ... O40222 37202420
    805347 8fae:A (3.8) BS02 83G ? GO:0019031 ... O40222 37202420
    805348 8fae:C (3.8) BS01 MAN ? GO:0019031 ... O40222 37202420
    805349 8fae:C (3.8) BS02 83G ? GO:0019031 ... O40222 37202420
    805350 8fae:E (3.8) BS01 83G ? GO:0019031 ... O40222 37202420
    805351 8fai:A (3.0) BS01 XL0 ? N/A P17792 36870333
    805352 8fai:A (3.0) BS02 XL0 ? N/A P17792 36870333
    805353 8fai:A (3.0) BS03 XL0 ? N/A P17792 36870333
    805354 8fai:B (3.0) BS01 XL0 ? N/A P17792 36870333
    805355 8fai:B (3.0) BS02 XL0 ? N/A P17792 36870333
    805356 8fai:B (3.0) BS03 XL0 ? N/A P17792 36870333
    805357 8fai:C (3.0) BS01 XL0 ? N/A P17792 36870333
    805358 8fai:C (3.0) BS02 XL0 ? N/A P17792 36870333
    805359 8fai:C (3.0) BS03 XL0 ? N/A P17792 36870333
    805360 8fai:D (3.0) BS01 XL0 ? N/A P17792 36870333
    805361 8fai:D (3.0) BS02 XL0 ? N/A P17792 36870333
    805362 8fai:D (3.0) BS03 XL0 ? N/A P17792 36870333
    805363 8fai:E (3.0) BS01 XL0 ? N/A P17792 36870333
    805364 8fai:E (3.0) BS02 XL0 ? N/A P17792 36870333
    805365 8fai:E (3.0) BS03 XL0 ? N/A P17792 36870333
    805366 8fai:F (3.0) BS01 XL0 ? N/A P17792 36870333
    805367 8fai:F (3.0) BS02 XL0 ? N/A P17792 36870333
    805368 8fai:F (3.0) BS03 XL0 ? N/A P17792 36870333
    805369 8fai:F (3.0) BS04 XL0 ? N/A P17792 36870333
    805370 8fai:G (3.0) BS01 XL0 ? N/A P17792 36870333
    805371 8fai:G (3.0) BS02 XL0 ? N/A P17792 36870333
    805372 8fai:G (3.0) BS03 XL0 ? N/A P17792 36870333
    805373 8fai:G (3.0) BS04 XL0 ? N/A P17792 36870333
    805374 8fai:H (3.0) BS01 XL0 ? N/A P17792 36870333
    805375 8fai:H (3.0) BS02 XL0 ? N/A P17792 36870333
    805376 8fai:H (3.0) BS03 XL0 ? N/A P17792 36870333
    805377 8fai:H (3.0) BS04 XL0 ? N/A P17792 36870333
    805378 8fai:I (3.0) BS01 XL0 ? N/A P17792 36870333
    805379 8fai:I (3.0) BS02 XL0 ? N/A P17792 36870333
    805380 8fai:I (3.0) BS03 XL0 ? N/A P17792 36870333
    805381 8fai:I (3.0) BS04 XL0 ? N/A P17792 36870333
    805382 8fai:J (3.0) BS01 XL0 ? N/A P17792 36870333
    805383 8fai:J (3.0) BS02 XL0 ? N/A P17792 36870333
    805384 8fai:J (3.0) BS03 XL0 ? N/A P17792 36870333
    805385 8fai:J (3.0) BS04 XL0 ? N/A P17792 36870333
    805386 8fai:K (3.0) BS01 XL0 ? N/A P17792 36870333
    805387 8fai:K (3.0) BS02 XL0 ? N/A P17792 36870333
    805388 8fai:K (3.0) BS03 XL0 ? N/A P17792 36870333
    805389 8fai:L (3.0) BS01 XL0 ? N/A P17792 36870333
    805390 8fai:L (3.0) BS02 XL0 ? N/A P17792 36870333
    805391 8fai:L (3.0) BS03 XL0 ? N/A P17792 36870333
    805392 8fai:M (3.0) BS01 XL0 ? N/A P17792 36870333
    805393 8fai:M (3.0) BS02 XL0 ? N/A P17792 36870333
    805394 8fai:M (3.0) BS03 XL0 ? N/A P17792 36870333
    805395 8fai:N (3.0) BS01 XL0 ? N/A P17792 36870333
    805396 8fai:N (3.0) BS02 XL0 ? N/A P17792 36870333
    805397 8fai:N (3.0) BS03 XL0 ? N/A P17792 36870333
    805398 8fai:O (3.0) BS01 XL0 ? N/A P17792 36870333
    805399 8fai:O (3.0) BS02 XL0 ? N/A P17792 36870333
    805400 8fai:O (3.0) BS03 XL0 ? N/A P17792 36870333

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).