SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4017 4018 4019 4020 4021 4022 4023 4024 4025 4026 4027 4028 4029 4030 4031 4032 4033 4034 4035 4036 4037 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    805201 8fl2:SA (2.67) BS02 rna ? GO:0002181 ... P36578 37410842
    805202 8fl2:SB (2.67) BS01 rna ? GO:0000027 ... P46777 37410842
    805203 8fl2:SB (2.67) BS02 rna ? GO:0000027 ... P46777 37410842
    805204 8fl2:SC (2.67) BS01 rna ? GO:0002181 ... Q02878 37410842
    805205 8fl2:SD (2.67) BS01 rna ? GO:0000463 ... P18124 37410842
    805206 8fl2:SD (2.67) BS02 rna ? GO:0000463 ... P18124 37410842
    805207 8fl2:SE (2.67) BS01 rna ? GO:0000470 ... P62424 37410842
    805208 8fl2:SE (2.67) BS02 rna ? GO:0000470 ... P62424 37410842
    805209 8fl2:SF (2.67) BS01 rna ? GO:0002181 ... P62917 37410842
    805210 8fl2:SF (2.67) BS02 MG ? GO:0002181 ... P62917 37410842
    805211 8fl2:SG (2.67) BS01 rna ? GO:0002181 ... P32969 37410842
    805212 8fl2:SH (2.67) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    805213 8fl2:SI (2.67) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    805214 8fl2:SI (2.67) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    805215 8fl2:SI (2.67) BS03 rna ? GO:0000463 ... Q6DKI1 37410842
    805216 8fl2:SK (2.67) BS01 rna ? GO:0000054 ... P56537 37410842
    805217 8fl2:SL (2.67) BS01 rna ? GO:0001649 ... O76021 37410842
    805218 8fl2:SM (2.67) BS01 rna ? GO:0000463 ... O00541 37410842
    805219 8fl2:SM (2.67) BS02 rna ? GO:0000463 ... O00541 37410842
    805220 8fl2:SQ (2.67) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    805221 8fl2:SR (2.67) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    805222 8fl2:SR (2.67) BS02 rna ? GO:0000079 ... Q9BZE4 37410842
    805223 8fl2:SR (2.67) BS03 GDP ? GO:0000079 ... Q9BZE4 37410842
    805224 8fl2:SV (2.67) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    805225 8fl2:SV (2.67) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    805226 8fl3:BA (2.53) BS01 rna ? GO:0002181 ... P30050 37410842
    805227 8fl3:BB (2.53) BS01 rna ? GO:0002181 ... P62906 37410842
    805228 8fl3:L5 (2.53) BS01 rna ? GO:0000027 ... P62913 37410842
    805229 8fl3:L5 (2.53) BS02 rna ? GO:0000027 ... P62913 37410842
    805230 8fl3:L6 (2.53) BS01 rna ? GO:0001824 ... P26373 37410842
    805231 8fl3:L6 (2.53) BS02 rna ? GO:0001824 ... P26373 37410842
    805232 8fl3:L6 (2.53) BS03 MG ? GO:0001824 ... P26373 37410842
    805233 8fl3:L7 (2.53) BS01 rna ? GO:0002181 ... P40429 37410842
    805234 8fl3:L8 (2.53) BS01 rna ? GO:0002181 ... P50914 37410842
    805235 8fl3:L9 (2.53) BS01 rna ? GO:0002181 ... P61313 37410842
    805236 8fl3:L9 (2.53) BS02 rna ? GO:0002181 ... P61313 37410842
    805237 8fl3:L9 (2.53) BS03 MG ? GO:0002181 ... P61313 37410842
    805238 8fl3:LA (2.53) BS01 rna ? GO:0002181 ... P18621 37410842
    805239 8fl3:LA (2.53) BS02 rna ? GO:0002181 ... P18621 37410842
    805240 8fl3:LB (2.53) BS01 rna ? GO:0002181 ... Q07020 37410842
    805241 8fl3:LC (2.53) BS01 rna ? GO:0002181 ... Q02543 37410842
    805242 8fl3:LC (2.53) BS02 rna ? GO:0002181 ... Q02543 37410842
    805243 8fl3:LD (2.53) BS01 rna ? GO:0002181 ... P84098 37410842
    805244 8fl3:LE (2.53) BS01 rna ? GO:0002181 ... P46778 37410842
    805245 8fl3:LE (2.53) BS02 rna ? GO:0002181 ... P46778 37410842
    805246 8fl3:LF (2.53) BS01 rna ? GO:0002181 ... P35268 37410842
    805247 8fl3:LG (2.53) BS01 rna ? GO:0000122 ... P62829 37410842
    805248 8fl3:LH (2.53) BS01 rna ? GO:0002181 ... P62750 37410842
    805249 8fl3:LH (2.53) BS02 rna ? GO:0002181 ... P62750 37410842
    805250 8fl3:LI (2.53) BS01 rna ? GO:0002181 ... P61254 37410842
    805251 8fl3:LI (2.53) BS02 rna ? GO:0002181 ... P61254 37410842
    805252 8fl3:LJ (2.53) BS01 rna ? GO:0002181 ... P61353 37410842
    805253 8fl3:LK (2.53) BS01 rna ? GO:0002181 ... P46776 37410842
    805254 8fl3:LL (2.53) BS01 rna ? GO:0002181 ... P46779 37410842
    805255 8fl3:LN (2.53) BS01 rna ? GO:0002181 ... P39023 37410842
    805256 8fl3:LO (2.53) BS01 rna ? GO:0002181 ... P62888 37410842
    805257 8fl3:LP (2.53) BS01 rna ? GO:0002181 ... P62899 37410842
    805258 8fl3:LQ (2.53) BS01 rna ? GO:0002181 ... P62910 37410842
    805259 8fl3:LQ (2.53) BS02 MG ? GO:0002181 ... P62910 37410842
    805260 8fl3:LR (2.53) BS01 rna ? GO:0002181 ... P49207 37410842
    805261 8fl3:LR (2.53) BS02 MG ? GO:0002181 ... P49207 37410842
    805262 8fl3:LR (2.53) BS03 ZN ? GO:0002181 ... P49207 37410842
    805263 8fl3:LS (2.53) BS01 rna ? GO:0000463 ... P42766 37410842
    805264 8fl3:LS (2.53) BS02 rna ? GO:0000463 ... P42766 37410842
    805265 8fl3:LT (2.53) BS01 rna ? GO:0000049 ... P18077 37410842
    805266 8fl3:LT (2.53) BS02 MG ? GO:0000049 ... P18077 37410842
    805267 8fl3:LU (2.53) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    805268 8fl3:LW (2.53) BS01 rna ? GO:0002181 ... P61927 37410842
    805269 8fl3:LW (2.53) BS02 rna ? GO:0002181 ... P61927 37410842
    805270 8fl3:LW (2.53) BS03 ZN ? GO:0002181 ... P61927 37410842
    805271 8fl3:LX (2.53) BS01 rna ? GO:0002181 ... P61513 37410842
    805272 8fl3:LX (2.53) BS02 ZN ? GO:0002181 ... P61513 37410842
    805273 8fl3:LY (2.53) BS01 rna ? GO:0001501 ... P63173 37410842
    805274 8fl3:LZ (2.53) BS01 rna ? GO:0002181 ... P62891 37410842
    805275 8fl3:LZ (2.53) BS02 rna ? GO:0002181 ... P62891 37410842
    805276 8fl3:NB (2.53) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    805277 8fl3:NB (2.53) BS02 rna ? GO:0003723 ... Q9BVP2 37410842
    805278 8fl3:NC (2.53) BS01 rna ? GO:0003723 ... Q13823 37410842
    805279 8fl3:NC (2.53) BS02 GTP ? GO:0003723 ... Q13823 37410842
    805280 8fl3:NC (2.53) BS03 MG ? GO:0003723 ... Q13823 37410842
    805281 8fl3:NF (2.53) BS01 rna ? GO:0000460 ... O95478 37410842
    805282 8fl3:NJ (2.53) BS01 rna ? GO:0000278 ... Q9NVX2 37410842
    805283 8fl3:NK (2.53) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    805284 8fl3:NL (2.53) BS01 rna ? GO:0000027 ... Q9NZM5 37410842
    805285 8fl3:NP (2.53) BS01 rna ? GO:0003676 ... O00488 37410842
    805286 8fl3:NP (2.53) BS02 ZN ? GO:0003676 ... O00488 37410842
    805287 8fl3:NT (2.53) BS01 rna ? GO:0000055 ... Q9NVU7 37410842
    805288 8fl3:NU (2.53) BS01 peptide ? GO:0005515 ... Q9NXF1 37410842
    805289 8fl3:NU (2.53) BS02 rna ? GO:0005515 ... Q9NXF1 37410842
    805290 8fl3:NY (2.53) BS01 rna ? GO:0000791 ... Q8IZL8 37410842
    805291 8fl3:NZ (2.53) BS01 rna ? GO:0003723 ... Q9H6F5 37410842
    805292 8fl3:NZ (2.53) BS02 rna ? GO:0003723 ... Q9H6F5 37410842
    805293 8fl3:SA (2.53) BS01 rna ? GO:0002181 ... P36578 37410842
    805294 8fl3:SA (2.53) BS02 rna ? GO:0002181 ... P36578 37410842
    805295 8fl3:SB (2.53) BS01 rna ? GO:0000027 ... P46777 37410842
    805296 8fl3:SB (2.53) BS02 rna ? GO:0000027 ... P46777 37410842
    805297 8fl3:SC (2.53) BS01 rna ? GO:0002181 ... Q02878 37410842
    805298 8fl3:SD (2.53) BS01 rna ? GO:0000463 ... P18124 37410842
    805299 8fl3:SD (2.53) BS02 rna ? GO:0000463 ... P18124 37410842
    805300 8fl3:SE (2.53) BS01 rna ? GO:0000470 ... P62424 37410842
    805301 8fl3:SE (2.53) BS02 rna ? GO:0000470 ... P62424 37410842
    805302 8fl3:SF (2.53) BS01 rna ? GO:0002181 ... P62917 37410842
    805303 8fl3:SF (2.53) BS02 MG ? GO:0002181 ... P62917 37410842
    805304 8fl3:SG (2.53) BS01 rna ? GO:0002181 ... P32969 37410842
    805305 8fl3:SI (2.53) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    805306 8fl3:SI (2.53) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    805307 8fl3:SK (2.53) BS01 rna ? GO:0000054 ... P56537 37410842
    805308 8fl3:SM (2.53) BS01 rna ? GO:0000463 ... O00541 37410842
    805309 8fl3:SM (2.53) BS02 rna ? GO:0000463 ... O00541 37410842
    805310 8fl3:SQ (2.53) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    805311 8fl3:SR (2.53) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    805312 8fl3:SR (2.53) BS02 rna ? GO:0000079 ... Q9BZE4 37410842
    805313 8fl3:SR (2.53) BS03 GDP ? GO:0000079 ... Q9BZE4 37410842
    805314 8fl3:SR (2.53) BS04 MG ? GO:0000079 ... Q9BZE4 37410842
    805315 8fl3:SV (2.53) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    805316 8fl3:SV (2.53) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    805317 8fl4:BA (2.89) BS01 rna ? GO:0002181 ... P30050 37410842
    805318 8fl4:BB (2.89) BS01 rna ? GO:0002181 ... P62906 37410842
    805319 8fl4:L5 (2.89) BS01 rna ? GO:0000027 ... P62913 37410842
    805320 8fl4:L5 (2.89) BS02 rna ? GO:0000027 ... P62913 37410842
    805321 8fl4:L6 (2.89) BS01 rna ? GO:0001824 ... P26373 37410842
    805322 8fl4:L6 (2.89) BS02 rna ? GO:0001824 ... P26373 37410842
    805323 8fl4:L6 (2.89) BS03 MG ? GO:0001824 ... P26373 37410842
    805324 8fl4:L7 (2.89) BS01 rna ? GO:0002181 ... P40429 37410842
    805325 8fl4:L8 (2.89) BS01 rna ? GO:0002181 ... P50914 37410842
    805326 8fl4:L9 (2.89) BS01 rna ? GO:0002181 ... P61313 37410842
    805327 8fl4:L9 (2.89) BS02 rna ? GO:0002181 ... P61313 37410842
    805328 8fl4:LA (2.89) BS01 rna ? GO:0002181 ... P18621 37410842
    805329 8fl4:LA (2.89) BS02 rna ? GO:0002181 ... P18621 37410842
    805330 8fl4:LB (2.89) BS01 rna ? GO:0002181 ... Q07020 37410842
    805331 8fl4:LC (2.89) BS01 rna ? GO:0002181 ... Q02543 37410842
    805332 8fl4:LC (2.89) BS02 rna ? GO:0002181 ... Q02543 37410842
    805333 8fl4:LD (2.89) BS01 rna ? GO:0002181 ... P84098 37410842
    805334 8fl4:LE (2.89) BS01 rna ? GO:0002181 ... P46778 37410842
    805335 8fl4:LE (2.89) BS02 rna ? GO:0002181 ... P46778 37410842
    805336 8fl4:LF (2.89) BS01 rna ? GO:0002181 ... P35268 37410842
    805337 8fl4:LG (2.89) BS01 rna ? GO:0000122 ... P62829 37410842
    805338 8fl4:LH (2.89) BS01 rna ? GO:0002181 ... P62750 37410842
    805339 8fl4:LH (2.89) BS02 rna ? GO:0002181 ... P62750 37410842
    805340 8fl4:LI (2.89) BS01 rna ? GO:0002181 ... P61254 37410842
    805341 8fl4:LI (2.89) BS02 rna ? GO:0002181 ... P61254 37410842
    805342 8fl4:LJ (2.89) BS01 rna ? GO:0002181 ... P61353 37410842
    805343 8fl4:LK (2.89) BS01 rna ? GO:0002181 ... P46776 37410842
    805344 8fl4:LL (2.89) BS01 rna ? GO:0002181 ... P46779 37410842
    805345 8fl4:LN (2.89) BS01 rna ? GO:0002181 ... P39023 37410842
    805346 8fl4:LO (2.89) BS01 rna ? GO:0002181 ... P62888 37410842
    805347 8fl4:LP (2.89) BS01 rna ? GO:0002181 ... P62899 37410842
    805348 8fl4:LQ (2.89) BS01 rna ? GO:0002181 ... P62910 37410842
    805349 8fl4:LQ (2.89) BS02 MG ? GO:0002181 ... P62910 37410842
    805350 8fl4:LR (2.89) BS01 rna ? GO:0002181 ... P49207 37410842
    805351 8fl4:LR (2.89) BS02 ZN ? GO:0002181 ... P49207 37410842
    805352 8fl4:LS (2.89) BS01 rna ? GO:0000463 ... P42766 37410842
    805353 8fl4:LS (2.89) BS02 rna ? GO:0000463 ... P42766 37410842
    805354 8fl4:LT (2.89) BS01 rna ? GO:0000049 ... P18077 37410842
    805355 8fl4:LT (2.89) BS02 MG ? GO:0000049 ... P18077 37410842
    805356 8fl4:LU (2.89) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    805357 8fl4:LW (2.89) BS01 rna ? GO:0002181 ... P61927 37410842
    805358 8fl4:LW (2.89) BS02 rna ? GO:0002181 ... P61927 37410842
    805359 8fl4:LW (2.89) BS03 ZN ? GO:0002181 ... P61927 37410842
    805360 8fl4:LX (2.89) BS01 rna ? GO:0002181 ... P61513 37410842
    805361 8fl4:LX (2.89) BS02 ZN ? GO:0002181 ... P61513 37410842
    805362 8fl4:LY (2.89) BS01 rna ? GO:0001501 ... P63173 37410842
    805363 8fl4:LZ (2.89) BS01 rna ? GO:0002181 ... P62891 37410842
    805364 8fl4:LZ (2.89) BS02 rna ? GO:0002181 ... P62891 37410842
    805365 8fl4:NB (2.89) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    805366 8fl4:NB (2.89) BS02 rna ? GO:0003723 ... Q9BVP2 37410842
    805367 8fl4:NC (2.89) BS01 rna ? GO:0003723 ... Q13823 37410842
    805368 8fl4:NC (2.89) BS02 GTP ? GO:0003723 ... Q13823 37410842
    805369 8fl4:NC (2.89) BS03 MG ? GO:0003723 ... Q13823 37410842
    805370 8fl4:NF (2.89) BS01 rna ? GO:0000460 ... O95478 37410842
    805371 8fl4:NJ (2.89) BS01 rna ? GO:0000278 ... Q9NVX2 37410842
    805372 8fl4:NK (2.89) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    805373 8fl4:NL (2.89) BS01 rna ? GO:0000027 ... Q9NZM5 37410842
    805374 8fl4:NL (2.89) BS02 rna ? GO:0000027 ... Q9NZM5 37410842
    805375 8fl4:NP (2.89) BS01 rna ? GO:0003676 ... O00488 37410842
    805376 8fl4:NP (2.89) BS02 ZN ? GO:0003676 ... O00488 37410842
    805377 8fl4:NT (2.89) BS01 rna ? GO:0000055 ... Q9NVU7 37410842
    805378 8fl4:NU (2.89) BS01 peptide ? GO:0005515 ... Q9NXF1 37410842
    805379 8fl4:NU (2.89) BS02 rna ? GO:0005515 ... Q9NXF1 37410842
    805380 8fl4:NY (2.89) BS01 rna ? GO:0000791 ... Q8IZL8 37410842
    805381 8fl4:NZ (2.89) BS01 rna ? GO:0003723 ... Q9H6F5 37410842
    805382 8fl4:NZ (2.89) BS02 rna ? GO:0003723 ... Q9H6F5 37410842
    805383 8fl4:SA (2.89) BS01 rna ? GO:0002181 ... P36578 37410842
    805384 8fl4:SA (2.89) BS02 rna ? GO:0002181 ... P36578 37410842
    805385 8fl4:SB (2.89) BS01 rna ? GO:0000027 ... P46777 37410842
    805386 8fl4:SB (2.89) BS02 rna ? GO:0000027 ... P46777 37410842
    805387 8fl4:SC (2.89) BS01 rna ? GO:0002181 ... Q02878 37410842
    805388 8fl4:SD (2.89) BS01 rna ? GO:0000463 ... P18124 37410842
    805389 8fl4:SD (2.89) BS02 rna ? GO:0000463 ... P18124 37410842
    805390 8fl4:SE (2.89) BS01 rna ? GO:0000470 ... P62424 37410842
    805391 8fl4:SE (2.89) BS02 rna ? GO:0000470 ... P62424 37410842
    805392 8fl4:SF (2.89) BS01 rna ? GO:0002181 ... P62917 37410842
    805393 8fl4:SF (2.89) BS02 MG ? GO:0002181 ... P62917 37410842
    805394 8fl4:SG (2.89) BS01 rna ? GO:0002181 ... P32969 37410842
    805395 8fl4:SK (2.89) BS01 rna ? GO:0000054 ... P56537 37410842
    805396 8fl4:SM (2.89) BS01 rna ? GO:0000463 ... O00541 37410842
    805397 8fl4:SQ (2.89) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    805398 8fl4:SR (2.89) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    805399 8fl4:SR (2.89) BS02 rna ? GO:0000079 ... Q9BZE4 37410842
    805400 8fl4:SR (2.89) BS03 GDP ? GO:0000079 ... Q9BZE4 37410842

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).