SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    805401 8faj:A (1.75) BS01 Y33 3.5.2.6 GO:0008658 ... Q6XEC0 37130087
    805402 8faj:A (1.75) BS02 CA 3.5.2.6 GO:0008658 ... Q6XEC0 37130087
    805403 8faj:A (1.75) BS03 CA 3.5.2.6 GO:0008658 ... Q6XEC0 37130087
    805404 8faj:B (1.75) BS01 Y33 3.5.2.6 GO:0008658 ... Q6XEC0 37130087
    805405 8faj:B (1.75) BS02 CA 3.5.2.6 GO:0008658 ... Q6XEC0 37130087
    805406 8fak:H (3.22) BS01 dna 3.6.4.- GO:0003676 ... P17888 37169801
    805407 8fak:H (3.22) BS02 dna 3.6.4.- GO:0003676 ... P17888 37169801
    805408 8fak:H (3.22) BS03 dna 3.6.4.- GO:0003676 ... P17888 37169801
    805409 8fak:H (3.22) BS04 ZN 3.6.4.- GO:0003676 ... P17888 37169801
    805410 8fak:H (3.22) BS05 ZN 3.6.4.- GO:0003676 ... P17888 37169801
    805411 8fal:A (1.37) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36735025
    805412 8fal:A (1.37) BS02 XO9 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36735025
    805413 8fan:A (2.9) BS01 peptide N/A N/A N/A 38007690
    805414 8fan:C (2.9) BS01 peptide N/A N/A N/A 38007690
    805415 8fan:D (2.9) BS01 peptide N/A N/A N/A 38007690
    805416 8fan:E (2.9) BS01 peptide N/A N/A N/A 38007690
    805417 8fan:F (2.9) BS01 peptide N/A N/A N/A 38007690
    805418 8fao:A (2.14) BS01 XLK ? GO:0045302 ... A0A833FHE1 N/A
    805419 8fao:B (2.14) BS01 XLK ? GO:0045302 ... A0A833FHE1 N/A
    805420 8fao:C (2.14) BS01 XLK ? GO:0045302 ... A0A833FHE1 N/A
    805421 8fao:D (2.14) BS01 XLK ? GO:0045302 ... A0A833FHE1 N/A
    805422 8fao:E (2.14) BS01 XLK ? GO:0045302 ... A0A833FHE1 N/A
    805423 8fao:F (2.14) BS01 XLK ? GO:0045302 ... A0A833FHE1 N/A
    805424 8fao:G (2.14) BS01 XLK ? GO:0045302 ... A0A833FHE1 N/A
    805425 8fao:H (2.14) BS01 XLK ? GO:0045302 ... A0A833FHE1 N/A
    805426 8fas:A (1.55) BS01 peptide N/A N/A N/A 38007690
    805427 8fas:B (1.55) BS01 peptide N/A N/A N/A 38007690
    805428 8fat:A (2.95) BS01 peptide N/A N/A N/A 38007690
    805429 8fat:B (2.95) BS01 peptide N/A N/A N/A 38007690
    805430 8fat:C (2.95) BS01 peptide N/A N/A N/A 38007690
    805431 8fat:D (2.95) BS01 peptide N/A N/A N/A 38007690
    805432 8fau:A (1.44) BS01 Y3E 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36735025
    805433 8fau:A (1.44) BS02 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36735025
    805434 8fav:A (1.85) BS01 LKY ? GO:0003677 ... P51449 36793423
    805435 8fav:A (1.85) BS02 4Y5 ? GO:0003677 ... P51449 36793423
    805436 8fav:B (1.85) BS01 LKY ? GO:0003677 ... P51449 36793423
    805437 8fav:B (1.85) BS02 4Y5 ? GO:0003677 ... P51449 36793423
    805438 8faw:A (2.16) BS01 GAL N/A GO:0019031 ... A0A6M4ZXR4 38890325
    805439 8faw:A (2.16) BS02 SIA N/A GO:0019031 ... A0A6M4ZXR4 38890325
    805440 8fax:A (2.1) BS01 peptide N/A N/A N/A 37014961
    805441 8fax:A (2.1) BS02 MG N/A N/A N/A 37014961
    805442 8fax:A (2.1) BS03 MG N/A N/A N/A 37014961
    805443 8fax:B (2.1) BS01 peptide N/A N/A N/A 37014961
    805444 8fay:A (1.91) BS01 dna 3.2.2.31 GO:0003677 ... Q9UIF7 40234396
    805445 8fay:A (1.91) BS02 dna 3.2.2.31 GO:0003677 ... Q9UIF7 40234396
    805446 8fay:A (1.91) BS03 SF4 3.2.2.31 GO:0003677 ... Q9UIF7 40234396
    805447 8fay:D (1.91) BS01 dna 3.2.2.31 GO:0003677 ... Q9UIF7 40234396
    805448 8fay:D (1.91) BS02 dna 3.2.2.31 GO:0003677 ... Q9UIF7 40234396
    805449 8fay:D (1.91) BS03 SF4 3.2.2.31 GO:0003677 ... Q9UIF7 40234396
    805450 8faz:C (2.3) BS01 ADP ? GO:0000400 ... O43502 37344589
    805451 8faz:C (2.3) BS02 ANP ? GO:0000400 ... O43502 37344589
    805452 8faz:D (2.3) BS01 ANP ? GO:0000400 ... O75771 37344589
    805453 8faz:D (2.3) BS02 MG ? GO:0000400 ... O75771 37344589
    805454 8faz:D (2.3) BS03 ANP ? GO:0000400 ... O75771 37344589
    805455 8faz:X (2.3) BS01 ANP ? GO:0000278 ... O43543 37344589
    805456 8fb0:A (1.76) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37868702
    805457 8fb0:A (1.76) BS02 ACM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37868702
    805458 8fb1:A (2.18) BS01 XNR ? GO:0003677 ... P51449 36793423
    805459 8fb1:A (2.18) BS02 4Y5 ? GO:0003677 ... P51449 36793423
    805460 8fb1:A (2.18) BS03 4Y5 ? GO:0003677 ... P51449 36793423
    805461 8fb1:B (2.18) BS01 4Y5 ? GO:0003677 ... P51449 36793423
    805462 8fb1:B (2.18) BS02 XNR ? GO:0003677 ... P51449 36793423
    805463 8fb1:B (2.18) BS03 4Y5 ? GO:0003677 ... P51449 36793423
    805464 8fb2:A (2.3) BS01 XO5 ? GO:0003677 ... P51449 36793423
    805465 8fb2:A (2.3) BS02 XNX ? GO:0003677 ... P51449 36793423
    805466 8fb2:B (2.3) BS01 XO5 ? GO:0003677 ... P51449 36793423
    805467 8fb2:B (2.3) BS02 XNX ? GO:0003677 ... P51449 36793423
    805468 8fb5:A (2.9) BS01 peptide N/A N/A N/A 38007690
    805469 8fb5:B (2.9) BS01 peptide N/A N/A N/A 38007690
    805470 8fb5:C (2.9) BS01 peptide N/A N/A N/A 38007690
    805471 8fb5:C (2.9) BS02 peptide N/A N/A N/A 38007690
    805472 8fb5:D (2.9) BS01 peptide N/A N/A N/A 38007690
    805473 8fb5:E (2.9) BS01 peptide N/A N/A N/A 38007690
    805474 8fb5:F (2.9) BS01 peptide N/A N/A N/A 38007690
    805475 8fb5:G (2.9) BS01 peptide N/A N/A N/A 38007690
    805476 8fb5:H (2.9) BS01 peptide N/A N/A N/A 38007690
    805477 8fb6:A (2.15) BS01 peptide N/A N/A N/A 38007690
    805478 8fb6:B (2.15) BS01 peptide N/A N/A N/A 38007690
    805479 8fb7:A (1.75) BS01 peptide N/A N/A N/A 38007690
    805480 8fb7:B (1.75) BS01 peptide N/A N/A N/A 38007690
    805481 8fb7:H (1.75) BS01 peptide N/A N/A N/A 38007690
    805482 8fb7:L (1.75) BS01 peptide N/A N/A N/A 38007690
    805483 8fb8:H (1.69) BS01 peptide N/A N/A N/A 38007690
    805484 8fb8:L (1.69) BS01 peptide N/A N/A N/A 38007690
    805485 8fb9:A (6.4) BS01 LYC ? GO:0005886 ... Q7M119 37399405
    805486 8fb9:C (6.4) BS01 LYC ? GO:0005886 ... Q7M119 37399405
    805487 8fb9:D (6.4) BS01 LYC ? GO:0005886 ... Q7M119 37399405
    805488 8fb9:G (6.4) BS01 LYC ? GO:0005886 ... Q7M119 37399405
    805489 8fb9:I (6.4) BS01 LYC ? GO:0005886 ... Q7M119 37399405
    805490 8fb9:K (6.4) BS01 LYC ? GO:0005886 ... Q7M119 37399405
    805491 8fb9:M (6.4) BS01 LYC ? GO:0005886 ... P97253 37399405
    805492 8fb9:O (6.4) BS01 LYC ? GO:0005886 ... P97253 37399405
    805493 8fb9:Q (6.4) BS01 LYC ? GO:0005886 ... P97253 37399405
    805494 8fb9:S (6.4) BS01 LYC ? GO:0005886 ... P97253 37399405
    805495 8fb9:U (6.4) BS01 LYC ? GO:0005886 ... P97253 37399405
    805496 8fb9:W (6.4) BS01 LYC ? GO:0005886 ... P97253 37399405
    805497 8fb9:Y (6.4) BS01 LYC ? GO:0005886 ... P97253 37399405
    805498 8fb9:a (6.4) BS01 LYC ? GO:0005886 ... P97253 37399405
    805499 8fb9:c (6.4) BS01 LYC ? GO:0005886 ... Q7M119 37399405
    805500 8fb9:e (6.4) BS01 LYC ? GO:0005886 ... Q7M119 37399405
    805501 8fba:A (1.96) BS01 peptide N/A N/A N/A 38007690
    805502 8fba:B (1.96) BS01 peptide N/A N/A N/A 38007690
    805503 8fba:C (1.96) BS01 peptide N/A N/A N/A 38007690
    805504 8fba:D (1.96) BS01 peptide N/A N/A N/A 38007690
    805505 8fbb:C (11.3) BS01 LYC ? GO:0005886 ... P97253 37399405
    805506 8fbb:D (11.3) BS01 LYC ? GO:0005886 ... P97253 37399405
    805507 8fbb:G (11.3) BS01 LYC ? GO:0005886 ... P97253 37399405
    805508 8fbb:I (11.3) BS01 LYC ? GO:0005886 ... P97253 37399405
    805509 8fbb:K (11.3) BS01 LYC ? GO:0005886 ... P97253 37399405
    805510 8fbb:M (11.3) BS01 LYC ? GO:0005886 ... P97253 37399405
    805511 8fbb:O (11.3) BS01 LYC ? GO:0005886 ... P97253 37399405
    805512 8fbb:Q (11.3) BS01 LYC ? GO:0005886 ... Q7M119 37399405
    805513 8fbb:S (11.3) BS01 LYC ? GO:0005886 ... Q7M119 37399405
    805514 8fbb:U (11.3) BS01 LYC ? GO:0005886 ... Q7M119 37399405
    805515 8fbb:W (11.3) BS01 LYC ? GO:0005886 ... Q7M119 37399405
    805516 8fbb:Y (11.3) BS01 LYC ? GO:0005886 ... Q7M119 37399405
    805517 8fbb:a (11.3) BS01 LYC ? GO:0005886 ... Q7M119 37399405
    805518 8fbb:c (11.3) BS01 LYC ? GO:0005886 ... Q7M119 37399405
    805519 8fbb:e (11.3) BS01 LYC ? GO:0005886 ... Q7M119 37399405
    805520 8fbb:g (11.3) BS01 LYC ? GO:0005886 ... P97253 37399405
    805521 8fbc:A (1.53) BS01 HEM ? GO:0004497 ... N/A 37138074
    805522 8fbc:B (1.53) BS01 HEM ? GO:0004497 ... N/A 37138074
    805523 8fbg:A (2.29) BS01 ZN 2.1.1.357 GO:0005634 ... O88491 N/A
    805524 8fbg:A (2.29) BS02 ZN 2.1.1.357 GO:0005634 ... O88491 N/A
    805525 8fbg:A (2.29) BS03 ZN 2.1.1.357 GO:0005634 ... O88491 N/A
    805526 8fbg:A (2.29) BS04 CA 2.1.1.357 GO:0005634 ... O88491 N/A
    805527 8fbg:A (2.29) BS05 SAM 2.1.1.357 GO:0005634 ... O88491 N/A
    805528 8fbg:A (2.29) BS06 CA 2.1.1.357 GO:0005634 ... O88491 N/A
    805529 8fbg:B (2.29) BS01 ZN 2.1.1.357 GO:0005634 ... O88491 N/A
    805530 8fbg:B (2.29) BS02 ZN 2.1.1.357 GO:0005634 ... O88491 N/A
    805531 8fbg:B (2.29) BS03 ZN 2.1.1.357 GO:0005634 ... O88491 N/A
    805532 8fbg:B (2.29) BS04 ZN 2.1.1.357 GO:0005634 ... O88491 N/A
    805533 8fbg:B (2.29) BS05 SAM 2.1.1.357 GO:0005634 ... O88491 N/A
    805534 8fbg:B (2.29) BS06 CA 2.1.1.357 GO:0005634 ... O88491 N/A
    805535 8fbh:A (2.32) BS01 ZN 2.1.1.357 GO:0005634 ... O88491 N/A
    805536 8fbh:A (2.32) BS02 ZN 2.1.1.357 GO:0005634 ... O88491 N/A
    805537 8fbh:A (2.32) BS03 ZN 2.1.1.357 GO:0005634 ... O88491 N/A
    805538 8fbh:A (2.32) BS04 SAM 2.1.1.357 GO:0005634 ... O88491 N/A
    805539 8fbl:A (2.7) BS01 PIO ? N/A Q9H813 36633397
    805540 8fbl:B (2.7) BS01 PIO ? N/A Q9H813 36633397
    805541 8fbl:C (2.7) BS01 PIO ? N/A Q9H813 36633397
    805542 8fbm:A (1.9) BS01 MYA 2.3.1.97 GO:0004379 ... Q5CV46 37722671
    805543 8fbm:A (1.9) BS02 XOF 2.3.1.97 GO:0004379 ... Q5CV46 37722671
    805544 8fbm:B (1.9) BS01 MYA 2.3.1.97 GO:0004379 ... Q5CV46 37722671
    805545 8fbm:B (1.9) BS02 XOF 2.3.1.97 GO:0004379 ... Q5CV46 37722671
    805546 8fbq:A (1.65) BS01 MYA 2.3.1.97 GO:0004379 ... A5K1A2 37669940
    805547 8fbq:A (1.65) BS02 XOQ 2.3.1.97 GO:0004379 ... A5K1A2 37669940
    805548 8fbt:A (2.2) BS01 MYA 2.3.1.97 GO:0004379 ... Q5CV46 37722671
    805549 8fbt:B (2.2) BS01 MYA 2.3.1.97 GO:0004379 ... Q5CV46 37722671
    805550 8fbu:A (2.0) BS01 MYA 2.3.1.97 GO:0004379 ... Q5CV46 37722671
    805551 8fbu:A (2.0) BS02 XOL 2.3.1.97 GO:0004379 ... Q5CV46 37722671
    805552 8fbu:B (2.0) BS01 MYA 2.3.1.97 GO:0004379 ... Q5CV46 37722671
    805553 8fbv:A (2.86) BS01 XOW 3.4.22.59 GO:0001650 ... P55212 37406165
    805554 8fbv:B (2.86) BS01 XOW 3.4.22.59 GO:0001650 ... P55212 37406165
    805555 8fbv:D (2.86) BS01 XOW 3.4.22.59 GO:0001650 ... P55212 37406165
    805556 8fbw:A (2.35) BS01 peptide N/A N/A N/A 36976017
    805557 8fbw:B (2.35) BS01 peptide N/A N/A N/A 36976017
    805558 8fbw:C (2.35) BS01 peptide N/A N/A N/A 36976017
    805559 8fbw:D (2.35) BS01 peptide N/A N/A N/A 36976017
    805560 8fbw:D (2.35) BS02 FUC N/A N/A N/A 36976017
    805561 8fc1:10 (2.5) BS01 rna ? GO:0003735 ... P60493 37452045
    805562 8fc1:10 (2.5) BS02 rna ? GO:0003735 ... P60493 37452045
    805563 8fc1:10 (2.5) BS03 MG ? GO:0003735 ... P60493 37452045
    805564 8fc1:10 (2.5) BS04 MG ? GO:0003735 ... P60493 37452045
    805565 8fc1:11 (2.5) BS01 rna ? GO:0003735 ... P60494 37452045
    805566 8fc1:11 (2.5) BS02 MG ? GO:0003735 ... P60494 37452045
    805567 8fc1:12 (2.5) BS01 rna ? GO:0003735 ... Q5SHP6 37452045
    805568 8fc1:13 (2.5) BS01 rna ? GO:0003735 ... Q5SHQ6 37452045
    805569 8fc1:13 (2.5) BS02 rna ? GO:0003735 ... Q5SHQ6 37452045
    805570 8fc1:13 (2.5) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    805571 8fc1:13 (2.5) BS04 MG ? GO:0003735 ... Q5SHQ6 37452045
    805572 8fc1:13 (2.5) BS05 MG ? GO:0003735 ... Q5SHQ6 37452045
    805573 8fc1:14 (2.5) BS01 rna ? GO:0003735 ... Q5SJE1 37452045
    805574 8fc1:14 (2.5) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    805575 8fc1:15 (2.5) BS01 rna ? GO:0003735 ... P80339 37452045
    805576 8fc1:15 (2.5) BS02 MG ? GO:0003735 ... P80339 37452045
    805577 8fc1:15 (2.5) BS03 MG ? GO:0003735 ... P80339 37452045
    805578 8fc1:15 (2.5) BS04 ZN ? GO:0003735 ... P80339 37452045
    805579 8fc1:16 (2.5) BS01 rna ? GO:0003735 ... P35871 37452045
    805580 8fc1:16 (2.5) BS02 ZN ? GO:0003735 ... P35871 37452045
    805581 8fc1:17 (2.5) BS01 rna ? GO:0003735 ... P80340 37452045
    805582 8fc1:17 (2.5) BS02 MG ? GO:0003735 ... P80340 37452045
    805583 8fc1:17 (2.5) BS03 MG ? GO:0003735 ... P80340 37452045
    805584 8fc1:18 (2.5) BS01 rna ? GO:0003735 ... Q5SKU1 37452045
    805585 8fc1:18 (2.5) BS02 MG ? GO:0003735 ... Q5SKU1 37452045
    805586 8fc1:18 (2.5) BS03 MG ? GO:0003735 ... Q5SKU1 37452045
    805587 8fc1:19 (2.5) BS01 rna ? GO:0003735 ... Q5SHR2 37452045
    805588 8fc1:19 (2.5) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    805589 8fc1:1D (2.5) BS01 rna ? GO:0002181 ... P60405 37452045
    805590 8fc1:1D (2.5) BS02 rna ? GO:0002181 ... P60405 37452045
    805591 8fc1:1D (2.5) BS03 MG ? GO:0002181 ... P60405 37452045
    805592 8fc1:1D (2.5) BS04 MG ? GO:0002181 ... P60405 37452045
    805593 8fc1:1D (2.5) BS05 MG ? GO:0002181 ... P60405 37452045
    805594 8fc1:1D (2.5) BS06 MG ? GO:0002181 ... P60405 37452045
    805595 8fc1:1D (2.5) BS07 MG ? GO:0002181 ... P60405 37452045
    805596 8fc1:1D (2.5) BS08 MG ? GO:0002181 ... P60405 37452045
    805597 8fc1:1D (2.5) BS09 MG ? GO:0002181 ... P60405 37452045
    805598 8fc1:1D (2.5) BS10 MG ? GO:0002181 ... P60405 37452045
    805599 8fc1:1D (2.5) BS11 MG ? GO:0002181 ... P60405 37452045
    805600 8fc1:1E (2.5) BS01 rna ? GO:0003735 ... Q5SHN8 37452045

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).