SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    805601 8fl9:LS (2.75) BS01 rna ? GO:0000463 ... P42766 37410842
    805602 8fl9:LS (2.75) BS02 rna ? GO:0000463 ... P42766 37410842
    805603 8fl9:LT (2.75) BS01 rna ? GO:0000049 ... P18077 37410842
    805604 8fl9:LT (2.75) BS02 MG ? GO:0000049 ... P18077 37410842
    805605 8fl9:LU (2.75) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    805606 8fl9:LV (2.75) BS01 rna ? GO:0002181 ... P83881 37410842
    805607 8fl9:LV (2.75) BS02 ZN ? GO:0002181 ... P83881 37410842
    805608 8fl9:LW (2.75) BS01 rna ? GO:0002181 ... P61927 37410842
    805609 8fl9:LW (2.75) BS02 rna ? GO:0002181 ... P61927 37410842
    805610 8fl9:LW (2.75) BS03 ZN ? GO:0002181 ... P61927 37410842
    805611 8fl9:LX (2.75) BS01 rna ? GO:0002181 ... P61513 37410842
    805612 8fl9:LX (2.75) BS02 ZN ? GO:0002181 ... P61513 37410842
    805613 8fl9:LY (2.75) BS01 rna ? GO:0001501 ... P63173 37410842
    805614 8fl9:LZ (2.75) BS01 rna ? GO:0002181 ... P62891 37410842
    805615 8fl9:LZ (2.75) BS02 rna ? GO:0002181 ... P62891 37410842
    805616 8fl9:NF (2.75) BS01 rna ? GO:0000460 ... O95478 37410842
    805617 8fl9:NK (2.75) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    805618 8fl9:NP (2.75) BS01 rna ? GO:0003676 ... O00488 37410842
    805619 8fl9:NP (2.75) BS02 ZN ? GO:0003676 ... O00488 37410842
    805620 8fl9:SA (2.75) BS01 rna ? GO:0002181 ... P36578 37410842
    805621 8fl9:SA (2.75) BS02 rna ? GO:0002181 ... P36578 37410842
    805622 8fl9:SB (2.75) BS01 rna ? GO:0000027 ... P46777 37410842
    805623 8fl9:SB (2.75) BS02 rna ? GO:0000027 ... P46777 37410842
    805624 8fl9:SC (2.75) BS01 rna ? GO:0002181 ... Q02878 37410842
    805625 8fl9:SD (2.75) BS01 rna ? GO:0000463 ... P18124 37410842
    805626 8fl9:SD (2.75) BS02 rna ? GO:0000463 ... P18124 37410842
    805627 8fl9:SE (2.75) BS01 rna ? GO:0000470 ... P62424 37410842
    805628 8fl9:SE (2.75) BS02 rna ? GO:0000470 ... P62424 37410842
    805629 8fl9:SF (2.75) BS01 rna ? GO:0002181 ... P62917 37410842
    805630 8fl9:SF (2.75) BS02 MG ? GO:0002181 ... P62917 37410842
    805631 8fl9:SG (2.75) BS01 rna ? GO:0002181 ... P32969 37410842
    805632 8fl9:SK (2.75) BS01 rna ? GO:0000054 ... P56537 37410842
    805633 8fl9:SQ (2.75) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    805634 8fl9:SR (2.75) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    805635 8fl9:SR (2.75) BS02 rna ? GO:0000079 ... Q9BZE4 37410842
    805636 8fl9:SR (2.75) BS03 GDP ? GO:0000079 ... Q9BZE4 37410842
    805637 8fl9:SR (2.75) BS04 MG ? GO:0000079 ... Q9BZE4 37410842
    805638 8fl9:SV (2.75) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    805639 8fl9:SV (2.75) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    805640 8fla:BA (2.63) BS01 rna ? GO:0002181 ... P30050 37410842
    805641 8fla:L5 (2.63) BS01 rna ? GO:0000027 ... P62913 37410842
    805642 8fla:L5 (2.63) BS02 rna ? GO:0000027 ... P62913 37410842
    805643 8fla:L6 (2.63) BS01 rna ? GO:0001824 ... P26373 37410842
    805644 8fla:L6 (2.63) BS02 rna ? GO:0001824 ... P26373 37410842
    805645 8fla:L7 (2.63) BS01 rna ? GO:0002181 ... P40429 37410842
    805646 8fla:L8 (2.63) BS01 rna ? GO:0002181 ... P50914 37410842
    805647 8fla:L9 (2.63) BS01 rna ? GO:0002181 ... P61313 37410842
    805648 8fla:L9 (2.63) BS02 rna ? GO:0002181 ... P61313 37410842
    805649 8fla:LA (2.63) BS01 rna ? GO:0002181 ... P18621 37410842
    805650 8fla:LA (2.63) BS02 rna ? GO:0002181 ... P18621 37410842
    805651 8fla:LB (2.63) BS01 rna ? GO:0002181 ... Q07020 37410842
    805652 8fla:LC (2.63) BS01 rna ? GO:0002181 ... Q02543 37410842
    805653 8fla:LC (2.63) BS02 rna ? GO:0002181 ... Q02543 37410842
    805654 8fla:LD (2.63) BS01 rna ? GO:0002181 ... P84098 37410842
    805655 8fla:LE (2.63) BS01 rna ? GO:0002181 ... P46778 37410842
    805656 8fla:LE (2.63) BS02 rna ? GO:0002181 ... P46778 37410842
    805657 8fla:LF (2.63) BS01 rna ? GO:0002181 ... P35268 37410842
    805658 8fla:LG (2.63) BS01 rna ? GO:0000122 ... P62829 37410842
    805659 8fla:LH (2.63) BS01 rna ? GO:0002181 ... P62750 37410842
    805660 8fla:LH (2.63) BS02 rna ? GO:0002181 ... P62750 37410842
    805661 8fla:LI (2.63) BS01 rna ? GO:0002181 ... P61254 37410842
    805662 8fla:LI (2.63) BS02 rna ? GO:0002181 ... P61254 37410842
    805663 8fla:LJ (2.63) BS01 rna ? GO:0002181 ... P61353 37410842
    805664 8fla:LK (2.63) BS01 rna ? GO:0002181 ... P46776 37410842
    805665 8fla:LL (2.63) BS01 rna ? GO:0002181 ... P46779 37410842
    805666 8fla:LM (2.63) BS01 rna ? GO:0002181 ... P47914 37410842
    805667 8fla:LN (2.63) BS01 rna ? GO:0002181 ... P39023 37410842
    805668 8fla:LO (2.63) BS01 rna ? GO:0002181 ... P62888 37410842
    805669 8fla:LP (2.63) BS01 rna ? GO:0002181 ... P62899 37410842
    805670 8fla:LQ (2.63) BS01 rna ? GO:0002181 ... P62910 37410842
    805671 8fla:LQ (2.63) BS02 MG ? GO:0002181 ... P62910 37410842
    805672 8fla:LR (2.63) BS01 rna ? GO:0002181 ... P49207 37410842
    805673 8fla:LR (2.63) BS02 ZN ? GO:0002181 ... P49207 37410842
    805674 8fla:LS (2.63) BS01 rna ? GO:0000463 ... P42766 37410842
    805675 8fla:LS (2.63) BS02 rna ? GO:0000463 ... P42766 37410842
    805676 8fla:LT (2.63) BS01 rna ? GO:0000049 ... P18077 37410842
    805677 8fla:LT (2.63) BS02 MG ? GO:0000049 ... P18077 37410842
    805678 8fla:LU (2.63) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    805679 8fla:LV (2.63) BS01 rna ? GO:0002181 ... P83881 37410842
    805680 8fla:LV (2.63) BS02 ZN ? GO:0002181 ... P83881 37410842
    805681 8fla:LW (2.63) BS01 rna ? GO:0002181 ... P61927 37410842
    805682 8fla:LW (2.63) BS02 rna ? GO:0002181 ... P61927 37410842
    805683 8fla:LW (2.63) BS03 ZN ? GO:0002181 ... P61927 37410842
    805684 8fla:LX (2.63) BS01 rna ? GO:0002181 ... P61513 37410842
    805685 8fla:LX (2.63) BS02 ZN ? GO:0002181 ... P61513 37410842
    805686 8fla:LY (2.63) BS01 rna ? GO:0001501 ... P63173 37410842
    805687 8fla:LZ (2.63) BS01 rna ? GO:0002181 ... P62891 37410842
    805688 8fla:LZ (2.63) BS02 rna ? GO:0002181 ... P62891 37410842
    805689 8fla:NK (2.63) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    805690 8fla:NL (2.63) BS01 rna ? GO:0000027 ... Q9NZM5 37410842
    805691 8fla:NP (2.63) BS01 rna ? GO:0003676 ... O00488 37410842
    805692 8fla:NP (2.63) BS02 ZN ? GO:0003676 ... O00488 37410842
    805693 8fla:NR (2.63) BS01 rna ? GO:0005515 ... Q96EY4 37410842
    805694 8fla:NR (2.63) BS02 rna ? GO:0005515 ... Q96EY4 37410842
    805695 8fla:SA (2.63) BS01 rna ? GO:0002181 ... P36578 37410842
    805696 8fla:SA (2.63) BS02 rna ? GO:0002181 ... P36578 37410842
    805697 8fla:SB (2.63) BS01 rna ? GO:0000027 ... P46777 37410842
    805698 8fla:SB (2.63) BS02 rna ? GO:0000027 ... P46777 37410842
    805699 8fla:SC (2.63) BS01 rna ? GO:0002181 ... Q02878 37410842
    805700 8fla:SD (2.63) BS01 rna ? GO:0000463 ... P18124 37410842
    805701 8fla:SD (2.63) BS02 rna ? GO:0000463 ... P18124 37410842
    805702 8fla:SE (2.63) BS01 rna ? GO:0000470 ... P62424 37410842
    805703 8fla:SE (2.63) BS02 rna ? GO:0000470 ... P62424 37410842
    805704 8fla:SF (2.63) BS01 rna ? GO:0002181 ... P62917 37410842
    805705 8fla:SF (2.63) BS02 MG ? GO:0002181 ... P62917 37410842
    805706 8fla:SG (2.63) BS01 rna ? GO:0002181 ... P32969 37410842
    805707 8fla:SH (2.63) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    805708 8fla:SI (2.63) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    805709 8fla:SI (2.63) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    805710 8fla:SI (2.63) BS03 rna ? GO:0000463 ... Q6DKI1 37410842
    805711 8fla:SK (2.63) BS01 rna ? GO:0000054 ... P56537 37410842
    805712 8fla:SL (2.63) BS01 rna ? GO:0001649 ... O76021 37410842
    805713 8fla:SM (2.63) BS01 rna ? GO:0000463 ... O00541 37410842
    805714 8fla:SM (2.63) BS02 rna ? GO:0000463 ... O00541 37410842
    805715 8fla:SQ (2.63) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    805716 8fla:SR (2.63) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    805717 8fla:SR (2.63) BS02 rna ? GO:0000079 ... Q9BZE4 37410842
    805718 8fla:SR (2.63) BS03 GDP ? GO:0000079 ... Q9BZE4 37410842
    805719 8fla:SR (2.63) BS04 MG ? GO:0000079 ... Q9BZE4 37410842
    805720 8fla:SV (2.63) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    805721 8fla:SV (2.63) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    805722 8fla:VB (2.63) BS01 rna ? N/A Q9UNZ5 37410842
    805723 8flb:BA (2.55) BS01 rna ? GO:0002181 ... P30050 37410842
    805724 8flb:L5 (2.55) BS01 rna ? GO:0000027 ... P62913 37410842
    805725 8flb:L5 (2.55) BS02 rna ? GO:0000027 ... P62913 37410842
    805726 8flb:L6 (2.55) BS01 rna ? GO:0001824 ... P26373 37410842
    805727 8flb:L6 (2.55) BS02 rna ? GO:0001824 ... P26373 37410842
    805728 8flb:L7 (2.55) BS01 rna ? GO:0002181 ... P40429 37410842
    805729 8flb:L8 (2.55) BS01 rna ? GO:0002181 ... P50914 37410842
    805730 8flb:L9 (2.55) BS01 rna ? GO:0002181 ... P61313 37410842
    805731 8flb:L9 (2.55) BS02 rna ? GO:0002181 ... P61313 37410842
    805732 8flb:LA (2.55) BS01 rna ? GO:0002181 ... P18621 37410842
    805733 8flb:LA (2.55) BS02 rna ? GO:0002181 ... P18621 37410842
    805734 8flb:LB (2.55) BS01 rna ? GO:0002181 ... Q07020 37410842
    805735 8flb:LC (2.55) BS01 rna ? GO:0002181 ... Q02543 37410842
    805736 8flb:LC (2.55) BS02 rna ? GO:0002181 ... Q02543 37410842
    805737 8flb:LD (2.55) BS01 rna ? GO:0002181 ... P84098 37410842
    805738 8flb:LE (2.55) BS01 rna ? GO:0002181 ... P46778 37410842
    805739 8flb:LE (2.55) BS02 rna ? GO:0002181 ... P46778 37410842
    805740 8flb:LF (2.55) BS01 rna ? GO:0002181 ... P35268 37410842
    805741 8flb:LG (2.55) BS01 rna ? GO:0000122 ... P62829 37410842
    805742 8flb:LH (2.55) BS01 rna ? GO:0002181 ... P62750 37410842
    805743 8flb:LH (2.55) BS02 rna ? GO:0002181 ... P62750 37410842
    805744 8flb:LI (2.55) BS01 rna ? GO:0002181 ... P61254 37410842
    805745 8flb:LI (2.55) BS02 rna ? GO:0002181 ... P61254 37410842
    805746 8flb:LJ (2.55) BS01 rna ? GO:0002181 ... P61353 37410842
    805747 8flb:LK (2.55) BS01 rna ? GO:0002181 ... P46776 37410842
    805748 8flb:LL (2.55) BS01 rna ? GO:0002181 ... P46779 37410842
    805749 8flb:LM (2.55) BS01 rna ? GO:0002181 ... P47914 37410842
    805750 8flb:LN (2.55) BS01 rna ? GO:0002181 ... P39023 37410842
    805751 8flb:LO (2.55) BS01 rna ? GO:0002181 ... P62888 37410842
    805752 8flb:LP (2.55) BS01 rna ? GO:0002181 ... P62899 37410842
    805753 8flb:LQ (2.55) BS01 rna ? GO:0002181 ... P62910 37410842
    805754 8flb:LQ (2.55) BS02 MG ? GO:0002181 ... P62910 37410842
    805755 8flb:LR (2.55) BS01 rna ? GO:0002181 ... P49207 37410842
    805756 8flb:LR (2.55) BS02 ZN ? GO:0002181 ... P49207 37410842
    805757 8flb:LS (2.55) BS01 rna ? GO:0000463 ... P42766 37410842
    805758 8flb:LS (2.55) BS02 rna ? GO:0000463 ... P42766 37410842
    805759 8flb:LT (2.55) BS01 rna ? GO:0000049 ... P18077 37410842
    805760 8flb:LT (2.55) BS02 MG ? GO:0000049 ... P18077 37410842
    805761 8flb:LU (2.55) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    805762 8flb:LV (2.55) BS01 rna ? GO:0002181 ... P83881 37410842
    805763 8flb:LV (2.55) BS02 ZN ? GO:0002181 ... P83881 37410842
    805764 8flb:LW (2.55) BS01 rna ? GO:0002181 ... P61927 37410842
    805765 8flb:LW (2.55) BS02 rna ? GO:0002181 ... P61927 37410842
    805766 8flb:LW (2.55) BS03 ZN ? GO:0002181 ... P61927 37410842
    805767 8flb:LX (2.55) BS01 rna ? GO:0002181 ... P61513 37410842
    805768 8flb:LX (2.55) BS02 ZN ? GO:0002181 ... P61513 37410842
    805769 8flb:LY (2.55) BS01 rna ? GO:0001501 ... P63173 37410842
    805770 8flb:LZ (2.55) BS01 rna ? GO:0002181 ... P62891 37410842
    805771 8flb:LZ (2.55) BS02 rna ? GO:0002181 ... P62891 37410842
    805772 8flb:NK (2.55) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    805773 8flb:NL (2.55) BS01 rna ? GO:0000027 ... Q9NZM5 37410842
    805774 8flb:NP (2.55) BS01 rna ? GO:0003676 ... O00488 37410842
    805775 8flb:NP (2.55) BS02 ZN ? GO:0003676 ... O00488 37410842
    805776 8flb:NR (2.55) BS01 rna ? GO:0005515 ... Q96EY4 37410842
    805777 8flb:NR (2.55) BS02 rna ? GO:0005515 ... Q96EY4 37410842
    805778 8flb:SA (2.55) BS01 rna ? GO:0002181 ... P36578 37410842
    805779 8flb:SA (2.55) BS02 rna ? GO:0002181 ... P36578 37410842
    805780 8flb:SB (2.55) BS01 rna ? GO:0000027 ... P46777 37410842
    805781 8flb:SB (2.55) BS02 rna ? GO:0000027 ... P46777 37410842
    805782 8flb:SC (2.55) BS01 rna ? GO:0002181 ... Q02878 37410842
    805783 8flb:SD (2.55) BS01 rna ? GO:0000463 ... P18124 37410842
    805784 8flb:SD (2.55) BS02 rna ? GO:0000463 ... P18124 37410842
    805785 8flb:SE (2.55) BS01 rna ? GO:0000470 ... P62424 37410842
    805786 8flb:SE (2.55) BS02 rna ? GO:0000470 ... P62424 37410842
    805787 8flb:SF (2.55) BS01 rna ? GO:0002181 ... P62917 37410842
    805788 8flb:SF (2.55) BS02 MG ? GO:0002181 ... P62917 37410842
    805789 8flb:SG (2.55) BS01 rna ? GO:0002181 ... P32969 37410842
    805790 8flb:SI (2.55) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    805791 8flb:SI (2.55) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    805792 8flb:SK (2.55) BS01 rna ? GO:0000054 ... P56537 37410842
    805793 8flb:SM (2.55) BS01 rna ? GO:0000463 ... O00541 37410842
    805794 8flb:SM (2.55) BS02 rna ? GO:0000463 ... O00541 37410842
    805795 8flb:SQ (2.55) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    805796 8flb:SR (2.55) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    805797 8flb:SR (2.55) BS02 rna ? GO:0000079 ... Q9BZE4 37410842
    805798 8flb:SR (2.55) BS03 GDP ? GO:0000079 ... Q9BZE4 37410842
    805799 8flb:SR (2.55) BS04 MG ? GO:0000079 ... Q9BZE4 37410842
    805800 8flb:SV (2.55) BS01 rna ? GO:0003735 ... Q9UHA3 37410842

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).